Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60041.t1 | XP_003604419.2 | 98.8 | 808 | 10 | 0 | 1 | 808 | 1 | 808 | 0.00E+00 | 1673.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60041.t1 | O04865 | 86.3 | 809 | 110 | 1 | 1 | 808 | 1 | 809 | 0.0e+00 | 1493.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60041.t1 | G7JI50 | 98.8 | 808 | 10 | 0 | 1 | 808 | 1 | 808 | 0.0e+00 | 1673.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene60041 | 0.819083 | 1.40E-52 | -1.69E-46 |
| MS.gene04932 | MS.gene60041 | 0.801614 | 8.29E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene60041 | 0.833539 | 5.03E-56 | -1.69E-46 |
| MS.gene050874 | MS.gene60041 | 0.802378 | 5.77E-49 | -1.69E-46 |
| MS.gene050875 | MS.gene60041 | 0.810927 | 9.04E-51 | -1.69E-46 |
| MS.gene051439 | MS.gene60041 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene051552 | MS.gene60041 | 0.809903 | 1.50E-50 | -1.69E-46 |
| MS.gene052209 | MS.gene60041 | 0.815622 | 8.41E-52 | -1.69E-46 |
| MS.gene052223 | MS.gene60041 | 0.811414 | 7.09E-51 | -1.69E-46 |
| MS.gene052378 | MS.gene60041 | 0.811611 | 6.42E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene60041 | 0.80699 | 6.29E-50 | -1.69E-46 |
| MS.gene054742 | MS.gene60041 | 0.817715 | 2.86E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene60041 | 0.832087 | 1.15E-55 | -1.69E-46 |
| MS.gene056198 | MS.gene60041 | 0.809242 | 2.08E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene60041 | 0.815214 | 1.04E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene60041 | -0.827927 | 1.19E-54 | -1.69E-46 |
| MS.gene05652 | MS.gene60041 | 0.820022 | 8.54E-53 | -1.69E-46 |
| MS.gene056678 | MS.gene60041 | 0.811074 | 8.40E-51 | -1.69E-46 |
| MS.gene056680 | MS.gene60041 | 0.800822 | 1.20E-48 | -1.69E-46 |
| MS.gene056688 | MS.gene60041 | 0.817329 | 3.49E-52 | -1.69E-46 |
| MS.gene056697 | MS.gene60041 | 0.812916 | 3.33E-51 | -1.69E-46 |
| MS.gene057669 | MS.gene60041 | 0.84418 | 8.87E-59 | -1.69E-46 |
| MS.gene057717 | MS.gene60041 | 0.84678 | 1.75E-59 | -1.69E-46 |
| MS.gene058158 | MS.gene60041 | 0.80933 | 2.00E-50 | -1.69E-46 |
| MS.gene058418 | MS.gene60041 | 0.826626 | 2.45E-54 | -1.69E-46 |
| MS.gene058452 | MS.gene60041 | 0.818976 | 1.48E-52 | -1.69E-46 |
| MS.gene05926 | MS.gene60041 | 0.860494 | 1.99E-63 | -1.69E-46 |
| MS.gene059315 | MS.gene60041 | 0.80414 | 2.49E-49 | -1.69E-46 |
| MS.gene05960 | MS.gene60041 | 0.831863 | 1.31E-55 | -1.69E-46 |
| MS.gene060087 | MS.gene60041 | 0.814929 | 1.20E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene60041 | 0.841478 | 4.64E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene60041 | MS.gene50038 | PPI |
| MS.gene60041 | MS.gene057038 | PPI |
| MS.gene020261 | MS.gene60041 | PPI |
| MS.gene60041 | MS.gene37011 | PPI |
| MS.gene057036 | MS.gene60041 | PPI |
| MS.gene072112 | MS.gene60041 | PPI |
| MS.gene60041 | MS.gene36409 | PPI |
| MS.gene85200 | MS.gene60041 | PPI |
| MS.gene057037 | MS.gene60041 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60041.t1 | MTR_4g010650 | 98.762 | 808 | 10 | 0 | 1 | 808 | 1 | 808 | 0.0 | 1665 |
| MS.gene60041.t1 | MTR_2g103730 | 85.167 | 809 | 119 | 1 | 1 | 808 | 1 | 809 | 0.0 | 1452 |
| MS.gene60041.t1 | MTR_3g107360 | 64.140 | 831 | 266 | 11 | 1 | 808 | 1 | 822 | 0.0 | 1082 |
| MS.gene60041.t1 | MTR_3g107320 | 63.101 | 832 | 268 | 10 | 6 | 808 | 5 | 826 | 0.0 | 1065 |
| MS.gene60041.t1 | MTR_7g075910 | 46.303 | 825 | 389 | 17 | 6 | 796 | 299 | 1103 | 0.0 | 726 |
| MS.gene60041.t1 | MTR_8g033080 | 47.296 | 795 | 381 | 15 | 26 | 796 | 258 | 1038 | 0.0 | 721 |
| MS.gene60041.t1 | MTR_5g011050 | 47.594 | 769 | 366 | 14 | 50 | 796 | 90 | 843 | 0.0 | 719 |
| MS.gene60041.t1 | MTR_5g011060 | 45.421 | 819 | 400 | 17 | 6 | 796 | 38 | 837 | 0.0 | 711 |
| MS.gene60041.t1 | MTR_5g023050 | 45.963 | 805 | 371 | 14 | 50 | 808 | 86 | 872 | 0.0 | 706 |
| MS.gene60041.t1 | MTR_8g088690 | 47.595 | 790 | 364 | 16 | 50 | 808 | 72 | 842 | 0.0 | 706 |
| MS.gene60041.t1 | MTR_3g114840 | 46.801 | 797 | 368 | 19 | 50 | 808 | 73 | 851 | 0.0 | 694 |
| MS.gene60041.t1 | MTR_2g100250 | 42.222 | 810 | 403 | 19 | 6 | 808 | 5 | 756 | 0.0 | 613 |
| MS.gene60041.t1 | MTR_3g114840 | 45.788 | 736 | 335 | 19 | 50 | 738 | 73 | 791 | 0.0 | 602 |
| MS.gene60041.t1 | MTR_8g016160 | 40.814 | 811 | 399 | 21 | 6 | 808 | 8 | 745 | 0.0 | 571 |
| MS.gene60041.t1 | MTR_8g033080 | 46.564 | 582 | 280 | 11 | 26 | 589 | 258 | 826 | 5.99e-170 | 512 |
| MS.gene60041.t1 | MTR_1g083620 | 32.636 | 239 | 124 | 10 | 497 | 725 | 477 | 688 | 3.83e-21 | 99.8 |
| MS.gene60041.t1 | MTR_1g083620 | 28.270 | 237 | 110 | 9 | 211 | 426 | 127 | 324 | 1.17e-15 | 82.0 |
| MS.gene60041.t1 | MTR_1g083620 | 32.636 | 239 | 124 | 10 | 497 | 725 | 737 | 948 | 5.73e-21 | 99.4 |
| MS.gene60041.t1 | MTR_1g083620 | 29.825 | 228 | 118 | 10 | 211 | 426 | 387 | 584 | 7.99e-16 | 82.8 |
| MS.gene60041.t1 | MTR_5g023040 | 54.930 | 71 | 29 | 1 | 324 | 394 | 806 | 873 | 1.03e-18 | 91.7 |
| MS.gene60041.t1 | MTR_2g435560 | 30.924 | 249 | 132 | 9 | 456 | 692 | 600 | 820 | 2.42e-18 | 90.9 |
| MS.gene60041.t1 | MTR_2g435560 | 27.155 | 232 | 119 | 8 | 211 | 426 | 253 | 450 | 3.28e-15 | 80.5 |
| MS.gene60041.t1 | MTR_2g435560 | 30.924 | 249 | 132 | 9 | 456 | 692 | 735 | 955 | 3.51e-18 | 90.5 |
| MS.gene60041.t1 | MTR_2g435560 | 27.155 | 232 | 119 | 8 | 211 | 426 | 388 | 585 | 3.09e-15 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60041.t1 | AT3G15730 | 81.728 | 810 | 146 | 2 | 1 | 808 | 1 | 810 | 0.0 | 1420 |
| MS.gene60041.t1 | AT1G52570 | 81.358 | 810 | 149 | 2 | 1 | 808 | 1 | 810 | 0.0 | 1412 |
| MS.gene60041.t1 | AT1G52570 | 81.358 | 810 | 149 | 2 | 1 | 808 | 1 | 810 | 0.0 | 1412 |
| MS.gene60041.t1 | AT1G52570 | 81.358 | 810 | 149 | 2 | 1 | 808 | 1 | 810 | 0.0 | 1412 |
| MS.gene60041.t1 | AT5G25370 | 61.576 | 825 | 290 | 10 | 3 | 808 | 4 | 820 | 0.0 | 1035 |
| MS.gene60041.t1 | AT5G25370 | 61.576 | 825 | 290 | 10 | 3 | 808 | 4 | 820 | 0.0 | 1035 |
| MS.gene60041.t1 | AT5G25370 | 61.576 | 825 | 290 | 10 | 3 | 808 | 4 | 820 | 0.0 | 1035 |
| MS.gene60041.t1 | AT5G25370 | 64.334 | 743 | 257 | 6 | 72 | 808 | 5 | 745 | 0.0 | 1000 |
| MS.gene60041.t1 | AT2G42010 | 45.510 | 824 | 394 | 17 | 6 | 796 | 271 | 1072 | 0.0 | 729 |
| MS.gene60041.t1 | AT2G42010 | 44.444 | 846 | 396 | 17 | 6 | 796 | 271 | 1097 | 0.0 | 723 |
| MS.gene60041.t1 | AT4G00240 | 46.545 | 767 | 377 | 13 | 50 | 796 | 11 | 764 | 0.0 | 715 |
| MS.gene60041.t1 | AT4G11840 | 45.157 | 826 | 404 | 15 | 6 | 796 | 44 | 855 | 0.0 | 714 |
| MS.gene60041.t1 | AT4G11830 | 44.928 | 828 | 403 | 15 | 6 | 796 | 34 | 845 | 0.0 | 714 |
| MS.gene60041.t1 | AT4G00240 | 45.512 | 791 | 393 | 14 | 26 | 796 | 144 | 916 | 0.0 | 714 |
| MS.gene60041.t1 | AT4G00240 | 46.545 | 767 | 377 | 13 | 50 | 796 | 128 | 881 | 0.0 | 714 |
| MS.gene60041.t1 | AT4G11830 | 46.323 | 775 | 372 | 13 | 50 | 796 | 55 | 813 | 0.0 | 712 |
| MS.gene60041.t1 | AT4G11850 | 45.200 | 823 | 404 | 16 | 6 | 796 | 40 | 847 | 0.0 | 703 |
| MS.gene60041.t1 | AT4G11840 | 44.606 | 825 | 380 | 15 | 6 | 796 | 44 | 825 | 0.0 | 693 |
| MS.gene60041.t1 | AT4G35790 | 46.491 | 798 | 368 | 17 | 50 | 808 | 80 | 857 | 0.0 | 677 |
| MS.gene60041.t1 | AT4G35790 | 46.106 | 809 | 366 | 18 | 50 | 808 | 80 | 868 | 0.0 | 670 |
| MS.gene60041.t1 | AT1G55180 | 40.678 | 767 | 402 | 17 | 50 | 808 | 19 | 740 | 0.0 | 586 |
| MS.gene60041.t1 | AT1G55180 | 39.286 | 812 | 427 | 18 | 5 | 808 | 9 | 762 | 0.0 | 585 |
| MS.gene60041.t1 | AT4G35790 | 46.242 | 612 | 282 | 12 | 50 | 626 | 80 | 679 | 1.06e-173 | 517 |
| MS.gene60041.t1 | AT4G11830 | 43.669 | 616 | 307 | 11 | 6 | 596 | 34 | 634 | 2.90e-169 | 503 |
| MS.gene60041.t1 | AT4G11830 | 43.907 | 599 | 296 | 11 | 6 | 579 | 34 | 617 | 9.02e-165 | 492 |
| MS.gene60041.t1 | AT3G05630 | 30.932 | 236 | 126 | 8 | 499 | 724 | 714 | 922 | 3.55e-20 | 96.7 |
| MS.gene60041.t1 | AT3G05630 | 27.329 | 322 | 155 | 14 | 131 | 426 | 304 | 572 | 3.06e-15 | 80.9 |
| MS.gene60041.t1 | AT3G16785 | 32.283 | 254 | 122 | 11 | 456 | 692 | 710 | 930 | 3.47e-19 | 93.6 |
| MS.gene60041.t1 | AT3G16785 | 30.942 | 223 | 104 | 9 | 220 | 426 | 389 | 577 | 1.25e-15 | 82.0 |
| MS.gene60041.t1 | AT3G16785 | 32.283 | 254 | 122 | 11 | 456 | 692 | 710 | 930 | 3.47e-19 | 93.6 |
| MS.gene60041.t1 | AT3G16785 | 30.942 | 223 | 104 | 9 | 220 | 426 | 389 | 577 | 1.25e-15 | 82.0 |
| MS.gene60041.t1 | AT3G16785 | 32.283 | 254 | 122 | 11 | 456 | 692 | 710 | 930 | 3.83e-19 | 93.6 |
| MS.gene60041.t1 | AT3G16785 | 30.942 | 223 | 104 | 9 | 220 | 426 | 389 | 577 | 1.24e-15 | 82.0 |
| MS.gene60041.t1 | AT3G16785 | 32.283 | 254 | 122 | 11 | 456 | 692 | 710 | 930 | 3.85e-19 | 93.6 |
| MS.gene60041.t1 | AT3G16785 | 30.942 | 223 | 104 | 9 | 220 | 426 | 389 | 577 | 1.29e-15 | 82.0 |
| MS.gene60041.t1 | AT3G16785 | 32.283 | 254 | 122 | 11 | 456 | 692 | 710 | 930 | 3.85e-19 | 93.6 |
| MS.gene60041.t1 | AT3G16785 | 30.942 | 223 | 104 | 9 | 220 | 426 | 389 | 577 | 1.18e-15 | 82.0 |
| MS.gene60041.t1 | AT3G16785 | 32.283 | 254 | 122 | 11 | 456 | 692 | 710 | 930 | 3.85e-19 | 93.6 |
| MS.gene60041.t1 | AT3G16785 | 30.942 | 223 | 104 | 9 | 220 | 426 | 389 | 577 | 1.18e-15 | 82.0 |
Find 232 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAGGTGGGTGGAAATTT+TGG | 0.132980 | 4.3:+86123331 | MS.gene60041:CDS |
| GCTTGAACCGATGCACTTTC+TGG | 0.151448 | 4.3:-86124697 | None:intergenic |
| ATTGATGGTGGGGCTGCTTT+TGG | 0.174765 | 4.3:+86124370 | MS.gene60041:CDS |
| GCAGCATCTTCAGGAGTTTC+TGG | 0.186898 | 4.3:-86124397 | None:intergenic |
| ATCGGTTGGTTTGTTGAAAA+AGG | 0.188851 | 4.3:+86123796 | MS.gene60041:CDS |
| CGTTCTTCTGCCTCGGTAAT+CGG | 0.218124 | 4.3:+86124821 | MS.gene60041:CDS |
| TCCATCCCCGGTAACATTTC+CGG | 0.219913 | 4.3:+86124309 | MS.gene60041:CDS |
| ATCCCTAAAATACCACTTTC+TGG | 0.238358 | 4.3:+86123548 | MS.gene60041:CDS |
| TCGCTCCGTCCATTGATCTT+TGG | 0.259842 | 4.3:-86125118 | None:intergenic |
| TTTCCTTGGTGAGGGATTCT+AGG | 0.266899 | 4.3:+86123675 | MS.gene60041:CDS |
| ACCAGATTGCTGACAAATAT+TGG | 0.280067 | 4.3:+86125309 | MS.gene60041:CDS |
| CCAGCTCTCGCAGCATCTTC+AGG | 0.308289 | 4.3:-86124406 | None:intergenic |
| AAAAGTCTAGTGAAGGTGTT+AGG | 0.315711 | 4.3:+86123744 | MS.gene60041:CDS |
| ACTCTATGCTACCATTGATT+TGG | 0.326580 | 4.3:+86123112 | MS.gene60041:CDS |
| ACCGCCATCATCAGGATTGC+GGG | 0.327108 | 4.3:-86123894 | None:intergenic |
| CCTGTTGGAGCAACTTTAAT+CGG | 0.329996 | 4.3:+86123263 | MS.gene60041:CDS |
| TCACTTGAGCACGACCTTCC+TGG | 0.343592 | 4.3:+86125350 | MS.gene60041:CDS |
| GTGAAAAGACTCGTACCATT+TGG | 0.347746 | 4.3:-86123186 | None:intergenic |
| ATCTTAAGTGAAAGTTCCTT+TGG | 0.350014 | 4.3:-86124604 | None:intergenic |
| CCCAATATTTGTCAGCAATC+TGG | 0.350230 | 4.3:-86125310 | None:intergenic |
| ATCCCTCACCAAGGAAATTT+CGG | 0.354270 | 4.3:-86123669 | None:intergenic |
| TTTCATCAACCTAACTTTCC+AGG | 0.354896 | 4.3:+86124118 | MS.gene60041:CDS |
| GACACCAAGGCTCGGATTCT+CGG | 0.360309 | 4.3:+86125449 | MS.gene60041:CDS |
| TGCATCGGTTCAAGCAATAT+TGG | 0.369787 | 4.3:+86124705 | MS.gene60041:CDS |
| CTCTGTGAGAAGAAAGTATA+CGG | 0.369951 | 4.3:-86123473 | None:intergenic |
| AACAATGGAGATGATGTATA+AGG | 0.370041 | 4.3:+86124741 | MS.gene60041:CDS |
| TCACATTTACTGTGCTCATA+TGG | 0.370819 | 4.3:+86123205 | MS.gene60041:CDS |
| GGCACACCCTCTGGCCACAT+TGG | 0.375949 | 4.3:-86124676 | None:intergenic |
| TGAAAAGACTCGTACCATTT+GGG | 0.379443 | 4.3:-86123185 | None:intergenic |
| ATGCTTATATTAATGCTATT+CGG | 0.380918 | 4.3:+86124473 | MS.gene60041:CDS |
| CCGATTAAAGTTGCTCCAAC+AGG | 0.380987 | 4.3:-86123263 | None:intergenic |
| TCGTAATCTGAATCAGGTTC+TGG | 0.383287 | 4.3:-86124883 | None:intergenic |
| TTCTAGGAGGCCAAAGGCTG+GGG | 0.387473 | 4.3:+86123691 | MS.gene60041:CDS |
| GCCTTGAAGGACCGATCGCT+TGG | 0.387667 | 4.3:+86124194 | MS.gene60041:CDS |
| CTGGCTGTCTTGCAGCTAAA+TGG | 0.393197 | 4.3:-86125178 | None:intergenic |
| ATTGAGGAAACTGTTGGTCT+TGG | 0.395386 | 4.3:+86123074 | MS.gene60041:CDS |
| TGTCCACAACCACAATCTTC+TGG | 0.398916 | 4.3:-86123961 | None:intergenic |
| ATGTCACGAAAGACCGCAGC+TGG | 0.399882 | 4.3:+86123414 | MS.gene60041:CDS |
| AGAATCCGAGCCTTGGTGTC+GGG | 0.406985 | 4.3:-86125446 | None:intergenic |
| GTTCTTCTGCCTCGGTAATC+GGG | 0.408625 | 4.3:+86124822 | MS.gene60041:CDS |
| CAGCATCTTCAGGAGTTTCT+GGG | 0.410189 | 4.3:-86124396 | None:intergenic |
| TGCAAAGCACCAATGTCTTC+AGG | 0.412451 | 4.3:-86124574 | None:intergenic |
| ATTGCAGCACCTGGAAAGTT+AGG | 0.413190 | 4.3:-86124127 | None:intergenic |
| AAACTTACCTATCATCATCT+TGG | 0.413744 | 4.3:-86124947 | None:intergenic |
| TGATGGCGGTAGCATCATTC+AGG | 0.414188 | 4.3:+86123907 | MS.gene60041:CDS |
| CCTGAAGATGCTGCGAGAGC+TGG | 0.415758 | 4.3:+86124406 | MS.gene60041:CDS |
| ATTCAAAGCGCTAAATTTCC+TGG | 0.415896 | 4.3:+86123446 | MS.gene60041:CDS |
| GATGTATAAGGATATCGTTC+TGG | 0.416806 | 4.3:+86124753 | MS.gene60041:CDS |
| GCACACCCTCTGGCCACATT+GGG | 0.418035 | 4.3:-86124675 | None:intergenic |
| ATGGCACAAATTCATCTTCA+TGG | 0.419518 | 4.3:+86121962 | MS.gene60041:CDS |
| CCAGATTGCTGACAAATATT+GGG | 0.419715 | 4.3:+86125310 | MS.gene60041:CDS |
| GCACTTTCTGGCACACCCTC+TGG | 0.420063 | 4.3:-86124685 | None:intergenic |
| TGATCATCCGGAAATGTTAC+CGG | 0.420713 | 4.3:-86124316 | None:intergenic |
| CAGCAATCTGGTTCACCTTA+CGG | 0.421232 | 4.3:-86125298 | None:intergenic |
| TTCCATGTCTCGTGATCATC+CGG | 0.424135 | 4.3:-86124328 | None:intergenic |
| ATTGAAAATCAGTATTTCCT+TGG | 0.426891 | 4.3:+86124517 | MS.gene60041:CDS |
| CATGAAACGTCGGGACTGTT+GGG | 0.428061 | 4.3:-86124911 | None:intergenic |
| CAGCTGTTTAGATCTATTGA+TGG | 0.430877 | 4.3:+86124355 | MS.gene60041:CDS |
| GTTCATACCAAGATGATGAT+AGG | 0.435880 | 4.3:+86124940 | MS.gene60041:CDS |
| TCTTCGAACCCTCTTGTATC+GGG | 0.436117 | 4.3:-86123367 | None:intergenic |
| CGCTTATCCGACCTTCCACC+AGG | 0.436478 | 4.3:-86123992 | None:intergenic |
| TCCGGAAATGTTACCGGGGA+TGG | 0.438701 | 4.3:-86124310 | None:intergenic |
| AGCTAAATGGTAGGGCTGAT+AGG | 0.439308 | 4.3:-86125165 | None:intergenic |
| TCTTAAGTGAAAGTTCCTTT+GGG | 0.441263 | 4.3:-86124603 | None:intergenic |
| TGTTTAGATCTATTGATGGT+GGG | 0.446034 | 4.3:+86124359 | MS.gene60041:CDS |
| TCATGAAACGTCGGGACTGT+TGG | 0.446105 | 4.3:-86124912 | None:intergenic |
| CTGTCTTGCAGCTAAATGGT+AGG | 0.447434 | 4.3:-86125174 | None:intergenic |
| GACATTCATTCCCGCCTTGA+AGG | 0.449178 | 4.3:+86124181 | MS.gene60041:CDS |
| ATCTTCGAACCCTCTTGTAT+CGG | 0.455754 | 4.3:-86123368 | None:intergenic |
| AAACACATGATATACATTAC+CGG | 0.460467 | 4.3:+86123632 | MS.gene60041:CDS |
| AAAGTCTAGTGAAGGTGTTA+GGG | 0.463222 | 4.3:+86123745 | MS.gene60041:CDS |
| GAAACCGCACAGTTCTTTGA+AGG | 0.467829 | 4.3:+86123845 | MS.gene60041:CDS |
| GATTCTAGGAGGCCAAAGGC+TGG | 0.467985 | 4.3:+86123689 | MS.gene60041:CDS |
| GCCGCCGAGAATCCGAGCCT+TGG | 0.470752 | 4.3:-86125453 | None:intergenic |
| TGTTTATACCGAAATTTCCT+TGG | 0.471207 | 4.3:+86123661 | MS.gene60041:CDS |
| TATCCGGCACATGAGAATCT+TGG | 0.471426 | 4.3:-86123520 | None:intergenic |
| ATGATGCTACCGCCATCATC+AGG | 0.471464 | 4.3:-86123902 | None:intergenic |
| GCGAGAGCTGGGCTTATTAG+TGG | 0.471776 | 4.3:+86124418 | MS.gene60041:CDS |
| CACTTGCTTCGCTATCCGAT+TGG | 0.472419 | 4.3:+86125374 | MS.gene60041:CDS |
| TCACCAGAAGATTGTGGTTG+TGG | 0.472585 | 4.3:+86123958 | MS.gene60041:CDS |
| GCTCTCTCGTAATCTGAATC+AGG | 0.473696 | 4.3:-86124889 | None:intergenic |
| AAGCTTAATGCTGGTGGTGG+TGG | 0.475675 | 4.3:+86122016 | MS.gene60041:CDS |
| TTCGGTATAAACAGACCAAC+CGG | 0.477585 | 4.3:-86123651 | None:intergenic |
| AACTAAGTAGTGAGGATAGG+AGG | 0.480878 | 4.3:-86125491 | None:intergenic |
| ATTCTAGGAGGCCAAAGGCT+GGG | 0.483116 | 4.3:+86123690 | MS.gene60041:CDS |
| CTGAAGATGCTGCGAGAGCT+GGG | 0.483144 | 4.3:+86124407 | MS.gene60041:CDS |
| TTATGAGCCTCATCGGTGTT+GGG | 0.483969 | 4.3:+86123580 | MS.gene60041:CDS |
| CCTTGAAGGACCGATCGCTT+GGG | 0.484290 | 4.3:+86124195 | MS.gene60041:CDS |
| CTCACAGAGGAAAGGATGTA+AGG | 0.488198 | 4.3:+86123487 | MS.gene60041:CDS |
| CTTATGAGCCTCATCGGTGT+TGG | 0.488671 | 4.3:+86123579 | MS.gene60041:CDS |
| CCCAAGCGATCGGTCCTTCA+AGG | 0.490151 | 4.3:-86124195 | None:intergenic |
| TTACCAAGATTCTCATGTGC+CGG | 0.490601 | 4.3:+86123517 | MS.gene60041:CDS |
| TCAGGTTCTGGTTGTTCAGA+AGG | 0.491713 | 4.3:-86124871 | None:intergenic |
| GGAGATGTCACACAGCTGCC+TGG | 0.492596 | 4.3:+86125410 | MS.gene60041:CDS |
| CCAGGTGCTGCAATCACAAA+AGG | 0.496013 | 4.3:+86124136 | MS.gene60041:CDS |
| CCATTCAAGACCTCCTCGAC+AGG | 0.496478 | 4.3:-86123299 | None:intergenic |
| CATTGATCTTTGGTTGATGT+TGG | 0.498653 | 4.3:-86125108 | None:intergenic |
| TACCGAAATTTCCTTGGTGA+GGG | 0.498969 | 4.3:+86123667 | MS.gene60041:CDS |
| TTCTATTATTCCTCCATCCC+CGG | 0.504693 | 4.3:+86124297 | MS.gene60041:CDS |
| CTGTTTAGATCTATTGATGG+TGG | 0.506397 | 4.3:+86124358 | MS.gene60041:CDS |
| ATTATGAGTAAGATTGAAGC+CGG | 0.506694 | 4.3:+86124625 | MS.gene60041:CDS |
| CAATCACAAAAGGCGGTCCA+AGG | 0.512335 | 4.3:+86124146 | MS.gene60041:CDS |
| AGGATATCGTTCTGGCACTC+AGG | 0.513143 | 4.3:+86124761 | MS.gene60041:CDS |
| CGTTCTGGCACTCAGGGCAA+AGG | 0.513948 | 4.3:+86124768 | MS.gene60041:CDS |
| CCTTCACTAGCAACTCCAAT+CGG | 0.513962 | 4.3:-86125389 | None:intergenic |
| GAAACTGTTGGTCTTGGAAA+GGG | 0.514436 | 4.3:+86123080 | MS.gene60041:CDS |
| GATCATCCGGAAATGTTACC+GGG | 0.516686 | 4.3:-86124315 | None:intergenic |
| TGGTGAGGAAATTGATAGGT+GGG | 0.528326 | 4.3:+86123319 | MS.gene60041:CDS |
| AAGCAATATTGGACTGGCAG+AGG | 0.531832 | 4.3:+86124716 | MS.gene60041:CDS |
| AACATAGATCATGAAACGTC+GGG | 0.533395 | 4.3:-86124920 | None:intergenic |
| ATGTCATGCCAAGGTTCCCT+TGG | 0.535392 | 4.3:-86124163 | None:intergenic |
| AGCGATCGGTCCTTCAAGGC+GGG | 0.535565 | 4.3:-86124191 | None:intergenic |
| GAGAATCCGAGCCTTGGTGT+CGG | 0.538506 | 4.3:-86125447 | None:intergenic |
| TCCAAGCAAAAGAGCTTCCA+AGG | 0.539099 | 4.3:-86124534 | None:intergenic |
| TAAGTCTTGCCACCAGAAAG+TGG | 0.539707 | 4.3:-86123560 | None:intergenic |
| CCATGGACTTGACCACGTGC+TGG | 0.539957 | 4.3:-86125197 | None:intergenic |
| TATTTGACGTTCTTCTGCCT+CGG | 0.540130 | 4.3:+86124814 | MS.gene60041:CDS |
| AAGAAAGTATACGGAACTCC+AGG | 0.540377 | 4.3:-86123464 | None:intergenic |
| GTTTAGATCTATTGATGGTG+GGG | 0.540703 | 4.3:+86124360 | MS.gene60041:CDS |
| CAAAATATTGCAGCTTCACA+TGG | 0.543780 | 4.3:-86123391 | None:intergenic |
| TCTTGCCTTCTCCAAATCAA+TGG | 0.546831 | 4.3:-86123123 | None:intergenic |
| TGATTTGGAGAAGGCAAGAG+TGG | 0.552030 | 4.3:+86123127 | MS.gene60041:CDS |
| AAGGCGGTCCAAGGGAACCT+TGG | 0.552221 | 4.3:+86124155 | MS.gene60041:CDS |
| GTGAAAGATGATAATCCTGT+TGG | 0.552822 | 4.3:+86123248 | MS.gene60041:CDS |
| CCAGCACGTGGTCAAGTCCA+TGG | 0.552842 | 4.3:+86125197 | MS.gene60041:CDS |
| ATGAGCATACTAATCCCAAA+TGG | 0.553693 | 4.3:+86123171 | MS.gene60041:CDS |
| GTTCTGGCACTCAGGGCAAA+GGG | 0.553846 | 4.3:+86124769 | MS.gene60041:CDS |
| TGCTACCATTGATTTGGAGA+AGG | 0.554396 | 4.3:+86123118 | MS.gene60041:CDS |
| CAAAACATTGAGGAAACTGT+TGG | 0.557099 | 4.3:+86123068 | MS.gene60041:CDS |
| GGAAACTGTTGGTCTTGGAA+AGG | 0.558000 | 4.3:+86123079 | MS.gene60041:CDS |
| CCAAACTAAGTAGTGAGGAT+AGG | 0.559043 | 4.3:-86125494 | None:intergenic |
| CAACATCAACCAAAGATCAA+TGG | 0.560182 | 4.3:+86125109 | MS.gene60041:CDS |
| TGAATGGTGAGGAAATTGAT+AGG | 0.560352 | 4.3:+86123315 | MS.gene60041:CDS |
| TTCCGGATGATCACGAGACA+TGG | 0.561317 | 4.3:+86124326 | MS.gene60041:CDS |
| GATATTAAGCCTGAAGACAT+TGG | 0.562253 | 4.3:+86124565 | MS.gene60041:CDS |
| GGATATCGTTCTGGCACTCA+GGG | 0.562290 | 4.3:+86124762 | MS.gene60041:CDS |
| TCTTCATGCTACTATCTATG+AGG | 0.563357 | 4.3:+86121988 | MS.gene60041:CDS |
| GATGACGAATACATAATCGT+TGG | 0.564804 | 4.3:+86125080 | MS.gene60041:CDS |
| ATACCGAAATTTCCTTGGTG+AGG | 0.565309 | 4.3:+86123666 | MS.gene60041:CDS |
| AACGATGGAGGAAGCAAGGT+GGG | 0.565356 | 4.3:+86124239 | MS.gene60041:CDS |
| AAAGACCGCAGCTGGGCTCG+AGG | 0.565566 | 4.3:+86123422 | MS.gene60041:CDS |
| CGGTTCAAGCAATATTGGAC+TGG | 0.566255 | 4.3:+86124710 | MS.gene60041:CDS |
| TTATGAGTAAGATTGAAGCC+GGG | 0.567721 | 4.3:+86124626 | MS.gene60041:CDS |
| AAGTAGTGAGGATAGGAGGG+AGG | 0.571376 | 4.3:-86125487 | None:intergenic |
| TGGGATGATAGAACATCGGT+TGG | 0.573109 | 4.3:+86123782 | MS.gene60041:CDS |
| TGTCTTGCAGCTAAATGGTA+GGG | 0.573776 | 4.3:-86125173 | None:intergenic |
| CCGCCATCATCAGGATTGCG+GGG | 0.573969 | 4.3:-86123893 | None:intergenic |
| ACTTTCTTCTCACAGAGGAA+AGG | 0.574250 | 4.3:+86123479 | MS.gene60041:CDS |
| TACTCATCACCAGAAGATTG+TGG | 0.574698 | 4.3:+86123952 | MS.gene60041:CDS |
| GATAAGCTTAATGCTGGTGG+TGG | 0.575966 | 4.3:+86122013 | MS.gene60041:CDS |
| GAATGCCTCGAGCCCAGCTG+CGG | 0.576491 | 4.3:-86123427 | None:intergenic |
| TACCGCCATCATCAGGATTG+CGG | 0.579693 | 4.3:-86123895 | None:intergenic |
| GGATTTACTTGTCTCTCTGA+GGG | 0.579805 | 4.3:+86124264 | MS.gene60041:CDS |
| ACTAAGTAGTGAGGATAGGA+GGG | 0.580152 | 4.3:-86125490 | None:intergenic |
| GGATAGCGAAGCAAGTGTCC+AGG | 0.581630 | 4.3:-86125368 | None:intergenic |
| CCTGTCGAGGAGGTCTTGAA+TGG | 0.582151 | 4.3:+86123299 | MS.gene60041:CDS |
| AGCTGGGCTTATTAGTGGAA+AGG | 0.583055 | 4.3:+86124423 | MS.gene60041:CDS |
| TGCTTTGCATCTCATCCCAA+AGG | 0.583132 | 4.3:+86124588 | MS.gene60041:CDS |
| GAATCCGAGCCTTGGTGTCG+GGG | 0.583277 | 4.3:-86125445 | None:intergenic |
| GCAAGACTTATGAGCCTCAT+CGG | 0.583714 | 4.3:+86123573 | MS.gene60041:CDS |
| TAGGTTGATGAAAATCATCA+TGG | 0.587769 | 4.3:-86124108 | None:intergenic |
| ACAGATCAGGCAAAACATTG+AGG | 0.589416 | 4.3:+86123058 | MS.gene60041:intron |
| AAAGATCAATGGACGGAGCG+AGG | 0.593749 | 4.3:+86125120 | MS.gene60041:CDS |
| GAGGGACTCTGAGATAGCGA+TGG | 0.594266 | 4.3:+86125139 | MS.gene60041:CDS |
| ATGGAGGAAGCAAGGTGGGA+AGG | 0.595810 | 4.3:+86124243 | MS.gene60041:CDS |
| GGAAATGTTACCGGGGATGG+AGG | 0.599535 | 4.3:-86124307 | None:intergenic |
| AGGGACTCTGAGATAGCGAT+GGG | 0.600455 | 4.3:+86125140 | MS.gene60041:CDS |
| AGGATTTACTTGTCTCTCTG+AGG | 0.601222 | 4.3:+86124263 | MS.gene60041:CDS |
| GAGGTTGATAAGCTTAATGC+TGG | 0.603431 | 4.3:+86122007 | MS.gene60041:CDS |
| AAATCAAGAATGTATCCGTA+AGG | 0.604233 | 4.3:+86125283 | MS.gene60041:CDS |
| ACATGATATACATTACCGGT+TGG | 0.606826 | 4.3:+86123636 | MS.gene60041:CDS |
| CCGATTGGAGTTGCTAGTGA+AGG | 0.611060 | 4.3:+86125389 | MS.gene60041:CDS |
| TATGAGTAAGATTGAAGCCG+GGG | 0.612358 | 4.3:+86124627 | MS.gene60041:CDS |
| CCTTGGTGAGGGATTCTAGG+AGG | 0.613168 | 4.3:+86123678 | MS.gene60041:CDS |
| AAGATCAATGGACGGAGCGA+GGG | 0.613208 | 4.3:+86125121 | MS.gene60041:CDS |
| TGTTTAACTTTGAGCAACGA+TGG | 0.613445 | 4.3:+86124224 | MS.gene60041:CDS |
| CGGGAATGAATGTCATGCCA+AGG | 0.614171 | 4.3:-86124172 | None:intergenic |
| AACAACACATCCCAAGCGAT+CGG | 0.615121 | 4.3:-86124205 | None:intergenic |
| GATTTGGAGAAGGCAAGAGT+GGG | 0.615789 | 4.3:+86123128 | MS.gene60041:CDS |
| AATCACAAAAGGCGGTCCAA+GGG | 0.616469 | 4.3:+86124147 | MS.gene60041:CDS |
| TGGTGGAAATTTCCTCAGCA+TGG | 0.616523 | 4.3:+86122033 | MS.gene60041:CDS |
| GAGCAACGATGGAGGAAGCA+AGG | 0.617826 | 4.3:+86124235 | MS.gene60041:CDS |
| TGAATTACCTGGTGGAAGGT+CGG | 0.619368 | 4.3:+86123985 | MS.gene60041:CDS |
| CGCCATCATCAGGATTGCGG+GGG | 0.619690 | 4.3:-86123892 | None:intergenic |
| TGGAGAAGGCAAGAGTGGGA+AGG | 0.621315 | 4.3:+86123132 | MS.gene60041:CDS |
| AGGGAATCGAGGAAGATCCT+CGG | 0.622355 | 4.3:+86124788 | MS.gene60041:CDS |
| TCTAGGAGGCCAAAGGCTGG+GGG | 0.624607 | 4.3:+86123692 | MS.gene60041:CDS |
| AGCATATGTGCCTGTCGAGG+AGG | 0.627896 | 4.3:+86123289 | MS.gene60041:CDS |
| GAACATAGATCATGAAACGT+CGG | 0.633210 | 4.3:-86124921 | None:intergenic |
| TGTTGTCCCAATGTGGCCAG+AGG | 0.634138 | 4.3:+86124669 | MS.gene60041:CDS |
| GAGGGATTCTAGGAGGCCAA+AGG | 0.637811 | 4.3:+86123685 | MS.gene60041:CDS |
| CTTCTGGTGATGAGTAAACA+TGG | 0.641961 | 4.3:-86123945 | None:intergenic |
| CGAGGAGGTCTTGAATGGTG+AGG | 0.642464 | 4.3:+86123304 | MS.gene60041:CDS |
| TGAGGAAATTGATAGGTGGG+TGG | 0.645001 | 4.3:+86123322 | MS.gene60041:CDS |
| GCATTATGGTATGAGCACCT+TGG | 0.646788 | 4.3:+86125230 | MS.gene60041:CDS |
| TGAGCCTCATCGGTGTTGGG+AGG | 0.651132 | 4.3:+86123583 | MS.gene60041:CDS |
| AGGAGTCATGAAGCATGCCA+AGG | 0.651697 | 4.3:-86125247 | None:intergenic |
| GTTGTCCCAATGTGGCCAGA+GGG | 0.653005 | 4.3:+86124670 | MS.gene60041:CDS |
| AAGAGCATATGTGCCTGTCG+AGG | 0.653021 | 4.3:+86123286 | MS.gene60041:CDS |
| AATCGGGAAGTAAAGAAACA+AGG | 0.653307 | 4.3:+86124838 | MS.gene60041:CDS |
| TATCATATCTTCCATCACAA+AGG | 0.653464 | 4.3:-86124045 | None:intergenic |
| ATCAACCAAAGATCAATGGA+CGG | 0.654662 | 4.3:+86125113 | MS.gene60041:CDS |
| CGTATACTTTCTTCTCACAG+AGG | 0.655571 | 4.3:+86123474 | MS.gene60041:CDS |
| AGCGAAGCAAGTGTCCAGGA+AGG | 0.657401 | 4.3:-86125364 | None:intergenic |
| GGGTGTGCCAGAAAGTGCAT+CGG | 0.660670 | 4.3:+86124690 | MS.gene60041:CDS |
| AATAAAACAGTACCATGCTG+AGG | 0.661732 | 4.3:-86122045 | None:intergenic |
| ACAGTGAATTACCTGGTGGA+AGG | 0.662406 | 4.3:+86123981 | MS.gene60041:CDS |
| CAACGATGGAGGAAGCAAGG+TGG | 0.668752 | 4.3:+86124238 | MS.gene60041:CDS |
| AAGAACGTCAAATAATTCCG+AGG | 0.670151 | 4.3:-86124805 | None:intergenic |
| AAGCGATCGGTCCTTCAAGG+CGG | 0.671322 | 4.3:-86124192 | None:intergenic |
| GGTGCTGCAATCACAAAAGG+CGG | 0.672665 | 4.3:+86124139 | MS.gene60041:CDS |
| ACTCAGGGCAAAGGGAATCG+AGG | 0.672681 | 4.3:+86124777 | MS.gene60041:CDS |
| ATGGTGAGGAAATTGATAGG+TGG | 0.675988 | 4.3:+86123318 | MS.gene60041:CDS |
| CCCCGCAATCCTGATGATGG+CGG | 0.678364 | 4.3:+86123893 | MS.gene60041:CDS |
| TCTTTACTTCCCGATTACCG+AGG | 0.680953 | 4.3:-86124831 | None:intergenic |
| ATATCCTCCCAACACCGATG+AGG | 0.682280 | 4.3:-86123587 | None:intergenic |
| TGTTTGGGATGATAGAACAT+CGG | 0.683265 | 4.3:+86123778 | MS.gene60041:CDS |
| TGTACGTTGTTGTCCCAATG+TGG | 0.686098 | 4.3:+86124662 | MS.gene60041:CDS |
| GCTGCAAGACAGCCAGCACG+TGG | 0.687862 | 4.3:+86125185 | MS.gene60041:CDS |
| TGTCACGAAAGACCGCAGCT+GGG | 0.688731 | 4.3:+86123415 | MS.gene60041:CDS |
| GTTGATAAGCTTAATGCTGG+TGG | 0.689428 | 4.3:+86122010 | MS.gene60041:CDS |
| ACCAAGGCTCGGATTCTCGG+CGG | 0.691037 | 4.3:+86125452 | MS.gene60041:CDS |
| ATAATGCCATGCGAAAACCA+TGG | 0.691651 | 4.3:-86125214 | None:intergenic |
| CCTAAAATACCACTTTCTGG+TGG | 0.698637 | 4.3:+86123551 | MS.gene60041:CDS |
| GTTGTGGACAGTGAATTACC+TGG | 0.700680 | 4.3:+86123974 | MS.gene60041:CDS |
| ATCATCCGGAAATGTTACCG+GGG | 0.705073 | 4.3:-86124314 | None:intergenic |
| TTAACTTTGAGCAACGATGG+AGG | 0.710551 | 4.3:+86124227 | MS.gene60041:CDS |
| CCTCCTAGAATCCCTCACCA+AGG | 0.715713 | 4.3:-86123678 | None:intergenic |
| GGACTGGCAGAGGAGAACAA+TGG | 0.727822 | 4.3:+86124726 | MS.gene60041:CDS |
| AGTACCTTCAAAGAACTGTG+CGG | 0.748352 | 4.3:-86123849 | None:intergenic |
| CTGGTGATGAGTAAACATGG+TGG | 0.787330 | 4.3:-86123942 | None:intergenic |
| GTGGACAGTGAATTACCTGG+TGG | 0.811877 | 4.3:+86123977 | MS.gene60041:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTGTTTTATTTAATTATTT+TGG | + | chr4.3:86122057-86122076 | MS.gene60041:intron | 10.0% |
| !! | ATAAGTATAAGCAAATAAAT+AGG | - | chr4.3:86123038-86123057 | None:intergenic | 15.0% |
| !! | TAAGTATAAGCAAATAAATA+GGG | - | chr4.3:86123037-86123056 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAGAATATTTTGG+TGG | + | chr4.3:86122190-86122209 | MS.gene60041:intron | 15.0% |
| !!! | ATTTTTAGATTTCATGTTTT+TGG | + | chr4.3:86122106-86122125 | MS.gene60041:intron | 15.0% |
| !! | AAATTACTGTCATAAATTAC+AGG | + | chr4.3:86124972-86124991 | MS.gene60041:intron | 20.0% |
| !! | ATGCTTATATTAATGCTATT+CGG | + | chr4.3:86124473-86124492 | MS.gene60041:CDS | 20.0% |
| !! | TAATATTGACAATTAACCAA+CGG | - | chr4.3:86122433-86122452 | None:intergenic | 20.0% |
| !!! | TTTAATTATTTTGGCCTATT+TGG | + | chr4.3:86122066-86122085 | MS.gene60041:intron | 20.0% |
| ! | AAACACATGATATACATTAC+CGG | + | chr4.3:86123632-86123651 | MS.gene60041:CDS | 25.0% |
| ! | AATAGGGTCATTAATAATGA+AGG | - | chr4.3:86123021-86123040 | None:intergenic | 25.0% |
| ! | AATATTGACAATTAACCAAC+GGG | - | chr4.3:86122432-86122451 | None:intergenic | 25.0% |
| ! | ATTGAAAATCAGTATTTCCT+TGG | + | chr4.3:86124517-86124536 | MS.gene60041:CDS | 25.0% |
| ! | GATAAAGTTAATGGTTATTC+AGG | - | chr4.3:86122747-86122766 | None:intergenic | 25.0% |
| ! | GATGCATAAGATAAAGTTAA+TGG | - | chr4.3:86122756-86122775 | None:intergenic | 25.0% |
| ! | TGTTTATACATACATTGACA+TGG | + | chr4.3:86122948-86122967 | MS.gene60041:intron | 25.0% |
| ! | TTGAATCATTAGATCCAAAT+AGG | - | chr4.3:86122083-86122102 | None:intergenic | 25.0% |
| !!! | AAAAAAGAATATTTTGGTGG+TGG | + | chr4.3:86122193-86122212 | MS.gene60041:intron | 25.0% |
| !!! | AAAAAGAATATTTTGGTGGT+GGG | + | chr4.3:86122194-86122213 | MS.gene60041:intron | 25.0% |
| !!! | ATATCAGTTTTGTCAAATGT+CGG | + | chr4.3:86122469-86122488 | MS.gene60041:intron | 25.0% |
| !!! | ATTTTAGGGATGAAATTATC+CGG | - | chr4.3:86123539-86123558 | None:intergenic | 25.0% |
| !!! | TAATTTGCTTGATTTAGCTT+TGG | - | chr4.3:86122915-86122934 | None:intergenic | 25.0% |
| AAACGCAAAACTAAAGAAAC+TGG | - | chr4.3:86122988-86123007 | None:intergenic | 30.0% | |
| AAACTTACCTATCATCATCT+TGG | - | chr4.3:86124950-86124969 | None:intergenic | 30.0% | |
| AAAGCAAAATCCAATGAGTA+AGG | - | chr4.3:86122831-86122850 | None:intergenic | 30.0% | |
| AAATCAAGAATGTATCCGTA+AGG | + | chr4.3:86125283-86125302 | MS.gene60041:CDS | 30.0% | |
| AACAATGGAGATGATGTATA+AGG | + | chr4.3:86124741-86124760 | MS.gene60041:CDS | 30.0% | |
| ATCTTAAGTGAAAGTTCCTT+TGG | - | chr4.3:86124607-86124626 | None:intergenic | 30.0% | |
| ATTATGAGTAAGATTGAAGC+CGG | + | chr4.3:86124625-86124644 | MS.gene60041:CDS | 30.0% | |
| CTAAAGAAAAAGTCTAGTGA+AGG | + | chr4.3:86123737-86123756 | MS.gene60041:CDS | 30.0% | |
| TACATTGCACATACATACAT+AGG | + | chr4.3:86122866-86122885 | MS.gene60041:intron | 30.0% | |
| TATCATATCTTCCATCACAA+AGG | - | chr4.3:86124048-86124067 | None:intergenic | 30.0% | |
| TCTTAAGTGAAAGTTCCTTT+GGG | - | chr4.3:86124606-86124625 | None:intergenic | 30.0% | |
| TGCTTATACTTATACAGATC+AGG | + | chr4.3:86123045-86123064 | MS.gene60041:intron | 30.0% | |
| TGTTTATACCGAAATTTCCT+TGG | + | chr4.3:86123661-86123680 | MS.gene60041:CDS | 30.0% | |
| ! | ATTCTTGATTTTCTGGATGA+AGG | - | chr4.3:86125274-86125293 | None:intergenic | 30.0% |
| ! | GTATATCATGTGTTTTGCAT+TGG | - | chr4.3:86123627-86123646 | None:intergenic | 30.0% |
| ! | TGTTTAGATCTATTGATGGT+GGG | + | chr4.3:86124359-86124378 | MS.gene60041:CDS | 30.0% |
| ! | TTGGATTTTGCTTTCGTTAT+TGG | + | chr4.3:86122837-86122856 | MS.gene60041:intron | 30.0% |
| !! | TAGGTTGATGAAAATCATCA+TGG | - | chr4.3:86124111-86124130 | None:intergenic | 30.0% |
| !! | TGATTTAGCTTTGGTTATTC+AGG | - | chr4.3:86122906-86122925 | None:intergenic | 30.0% |
| !!! | AAAAGAATATTTTGGTGGTG+GGG | + | chr4.3:86122195-86122214 | MS.gene60041:intron | 30.0% |
| !!! | AAGAATTGTGAGTTTTGTTG+GGG | + | chr4.3:86124015-86124034 | MS.gene60041:CDS | 30.0% |
| !!! | GAAGAATTGTGAGTTTTGTT+GGG | + | chr4.3:86124014-86124033 | MS.gene60041:CDS | 30.0% |
| AACATAGATCATGAAACGTC+GGG | - | chr4.3:86124923-86124942 | None:intergenic | 35.0% | |
| AAGAACGTCAAATAATTCCG+AGG | - | chr4.3:86124808-86124827 | None:intergenic | 35.0% | |
| AATAAAACAGTACCATGCTG+AGG | - | chr4.3:86122048-86122067 | None:intergenic | 35.0% | |
| AATCGGGAAGTAAAGAAACA+AGG | + | chr4.3:86124838-86124857 | MS.gene60041:CDS | 35.0% | |
| ACATGATATACATTACCGGT+TGG | + | chr4.3:86123636-86123655 | MS.gene60041:CDS | 35.0% | |
| ACCAGATTGCTGACAAATAT+TGG | + | chr4.3:86125309-86125328 | MS.gene60041:CDS | 35.0% | |
| ATCAACCAAAGATCAATGGA+CGG | + | chr4.3:86125113-86125132 | MS.gene60041:CDS | 35.0% | |
| ATCCCTAAAATACCACTTTC+TGG | + | chr4.3:86123548-86123567 | MS.gene60041:CDS | 35.0% | |
| ATGAGCATACTAATCCCAAA+TGG | + | chr4.3:86123171-86123190 | MS.gene60041:CDS | 35.0% | |
| ATGGCACAAATTCATCTTCA+TGG | + | chr4.3:86121962-86121981 | MS.gene60041:CDS | 35.0% | |
| CAAAACATTGAGGAAACTGT+TGG | + | chr4.3:86123068-86123087 | MS.gene60041:CDS | 35.0% | |
| CAAAATATTGCAGCTTCACA+TGG | - | chr4.3:86123394-86123413 | None:intergenic | 35.0% | |
| CAACATCAACCAAAGATCAA+TGG | + | chr4.3:86125109-86125128 | MS.gene60041:CDS | 35.0% | |
| CACAAAGTAGTTTCAATCGA+AGG | - | chr4.3:86122704-86122723 | None:intergenic | 35.0% | |
| CAGCTGTTTAGATCTATTGA+TGG | + | chr4.3:86124355-86124374 | MS.gene60041:CDS | 35.0% | |
| CATCTGTTACAAATTAGGCA+TGG | - | chr4.3:86122530-86122549 | None:intergenic | 35.0% | |
| CCAGATTGCTGACAAATATT+GGG | + | chr4.3:86125310-86125329 | MS.gene60041:CDS | 35.0% | |
| CTGTTTAGATCTATTGATGG+TGG | + | chr4.3:86124358-86124377 | MS.gene60041:CDS | 35.0% | |
| GAAAAAAACCCGATACAAGA+GGG | + | chr4.3:86123359-86123378 | MS.gene60041:CDS | 35.0% | |
| GAACATAGATCATGAAACGT+CGG | - | chr4.3:86124924-86124943 | None:intergenic | 35.0% | |
| GATATTAAGCCTGAAGACAT+TGG | + | chr4.3:86124565-86124584 | MS.gene60041:CDS | 35.0% | |
| GATGACGAATACATAATCGT+TGG | + | chr4.3:86125080-86125099 | MS.gene60041:CDS | 35.0% | |
| GATGTATAAGGATATCGTTC+TGG | + | chr4.3:86124753-86124772 | MS.gene60041:CDS | 35.0% | |
| GTGAAAGATGATAATCCTGT+TGG | + | chr4.3:86123248-86123267 | MS.gene60041:CDS | 35.0% | |
| GTTCATACCAAGATGATGAT+AGG | + | chr4.3:86124940-86124959 | MS.gene60041:CDS | 35.0% | |
| TCACATTTACTGTGCTCATA+TGG | + | chr4.3:86123205-86123224 | MS.gene60041:CDS | 35.0% | |
| TCTTCATGCTACTATCTATG+AGG | + | chr4.3:86121988-86122007 | MS.gene60041:CDS | 35.0% | |
| TGAAAAAAACCCGATACAAG+AGG | + | chr4.3:86123358-86123377 | MS.gene60041:CDS | 35.0% | |
| TGAAAAGACTCGTACCATTT+GGG | - | chr4.3:86123188-86123207 | None:intergenic | 35.0% | |
| TGAATGGTGAGGAAATTGAT+AGG | + | chr4.3:86123315-86123334 | MS.gene60041:CDS | 35.0% | |
| TTATGAGTAAGATTGAAGCC+GGG | + | chr4.3:86124626-86124645 | MS.gene60041:CDS | 35.0% | |
| TTTCATCAACCTAACTTTCC+AGG | + | chr4.3:86124118-86124137 | MS.gene60041:CDS | 35.0% | |
| ! | ACTCTATGCTACCATTGATT+TGG | + | chr4.3:86123112-86123131 | MS.gene60041:CDS | 35.0% |
| ! | ATTCAAAGCGCTAAATTTCC+TGG | + | chr4.3:86123446-86123465 | MS.gene60041:CDS | 35.0% |
| ! | CACCAGAAAGTGGTATTTTA+GGG | - | chr4.3:86123553-86123572 | None:intergenic | 35.0% |
| ! | CATGCCTAATTTGTAACAGA+TGG | + | chr4.3:86122528-86122547 | MS.gene60041:intron | 35.0% |
| ! | CATTGATCTTTGGTTGATGT+TGG | - | chr4.3:86125111-86125130 | None:intergenic | 35.0% |
| ! | CCTAATTTGTAACAGATGGT+GGG | + | chr4.3:86122532-86122551 | MS.gene60041:intron | 35.0% |
| ! | CGGATACATTCTTGATTTTC+TGG | - | chr4.3:86125281-86125300 | None:intergenic | 35.0% |
| ! | CTAATTTGTAACAGATGGTG+GGG | + | chr4.3:86122533-86122552 | MS.gene60041:intron | 35.0% |
| ! | CTCTGTGAGAAGAAAGTATA+CGG | - | chr4.3:86123476-86123495 | None:intergenic | 35.0% |
| ! | TGTTTAACTTTGAGCAACGA+TGG | + | chr4.3:86124224-86124243 | MS.gene60041:CDS | 35.0% |
| ! | TGTTTGGGATGATAGAACAT+CGG | + | chr4.3:86123778-86123797 | MS.gene60041:CDS | 35.0% |
| ! | TTGATTTTCTGGATGAAGGA+AGG | - | chr4.3:86125270-86125289 | None:intergenic | 35.0% |
| ! | TTTAAGGTGGCTCAAAATGA+CGG | + | chr4.3:86122565-86122584 | MS.gene60041:intron | 35.0% |
| !! | AAAAGTCTAGTGAAGGTGTT+AGG | + | chr4.3:86123744-86123763 | MS.gene60041:CDS | 35.0% |
| !! | AAAGTCTAGTGAAGGTGTTA+GGG | + | chr4.3:86123745-86123764 | MS.gene60041:CDS | 35.0% |
| !! | ATCGGTTGGTTTGTTGAAAA+AGG | + | chr4.3:86123796-86123815 | MS.gene60041:CDS | 35.0% |
| !! | CAAGAGTTCTAAAAAGTGAG+TGG | - | chr4.3:86124078-86124097 | None:intergenic | 35.0% |
| !! | CGAAGAATTGTGAGTTTTGT+TGG | + | chr4.3:86124013-86124032 | MS.gene60041:CDS | 35.0% |
| !! | GTTCTAAAAAGTGAGTGGAA+TGG | - | chr4.3:86124073-86124092 | None:intergenic | 35.0% |
| !! | GTTGAAAAAGGATGGATTGA+TGG | + | chr4.3:86123808-86123827 | MS.gene60041:CDS | 35.0% |
| !! | GTTGGTTTGTTGAAAAAGGA+TGG | + | chr4.3:86123800-86123819 | MS.gene60041:CDS | 35.0% |
| !! | GTTTAGATCTATTGATGGTG+GGG | + | chr4.3:86124360-86124379 | MS.gene60041:CDS | 35.0% |
| !! | TAGGGTTTTGATGCTTGTTT+GGG | + | chr4.3:86123763-86123782 | MS.gene60041:CDS | 35.0% |
| !! | TTAGGGTTTTGATGCTTGTT+TGG | + | chr4.3:86123762-86123781 | MS.gene60041:CDS | 35.0% |
| !!! | AGAATTGTGAGTTTTGTTGG+GGG | + | chr4.3:86124016-86124035 | MS.gene60041:CDS | 35.0% |
| ACAGATCAGGCAAAACATTG+AGG | + | chr4.3:86123058-86123077 | MS.gene60041:intron | 40.0% | |
| ACAGATCCTAAAAGCAAGCA+GGG | - | chr4.3:86122243-86122262 | None:intergenic | 40.0% | |
| ACTTTCTTCTCACAGAGGAA+AGG | + | chr4.3:86123479-86123498 | MS.gene60041:CDS | 40.0% | |
| AGGATTTACTTGTCTCTCTG+AGG | + | chr4.3:86124263-86124282 | MS.gene60041:CDS | 40.0% | |
| AGTACCTTCAAAGAACTGTG+CGG | - | chr4.3:86123852-86123871 | None:intergenic | 40.0% | |
| ATAATGCCATGCGAAAACCA+TGG | - | chr4.3:86125217-86125236 | None:intergenic | 40.0% | |
| ATACCGAAATTTCCTTGGTG+AGG | + | chr4.3:86123666-86123685 | MS.gene60041:CDS | 40.0% | |
| ATCCCTCACCAAGGAAATTT+CGG | - | chr4.3:86123672-86123691 | None:intergenic | 40.0% | |
| ATCTTCGAACCCTCTTGTAT+CGG | - | chr4.3:86123371-86123390 | None:intergenic | 40.0% | |
| ATGGTGAGGAAATTGATAGG+TGG | + | chr4.3:86123318-86123337 | MS.gene60041:CDS | 40.0% | |
| CCCAATATTTGTCAGCAATC+TGG | - | chr4.3:86125313-86125332 | None:intergenic | 40.0% | |
| CCCACCATCTGTTACAAATT+AGG | - | chr4.3:86122535-86122554 | None:intergenic | 40.0% | |
| CCTAAAATACCACTTTCTGG+TGG | + | chr4.3:86123551-86123570 | MS.gene60041:CDS | 40.0% | |
| CCTGTTGGAGCAACTTTAAT+CGG | + | chr4.3:86123263-86123282 | MS.gene60041:CDS | 40.0% | |
| CGTATACTTTCTTCTCACAG+AGG | + | chr4.3:86123474-86123493 | MS.gene60041:CDS | 40.0% | |
| GGATTTACTTGTCTCTCTGA+GGG | + | chr4.3:86124264-86124283 | MS.gene60041:CDS | 40.0% | |
| GTGAAAAGACTCGTACCATT+TGG | - | chr4.3:86123189-86123208 | None:intergenic | 40.0% | |
| TACCGAAATTTCCTTGGTGA+GGG | + | chr4.3:86123667-86123686 | MS.gene60041:CDS | 40.0% | |
| TACTCATCACCAGAAGATTG+TGG | + | chr4.3:86123952-86123971 | MS.gene60041:CDS | 40.0% | |
| TATGAGTAAGATTGAAGCCG+GGG | + | chr4.3:86124627-86124646 | MS.gene60041:CDS | 40.0% | |
| TATTTGACGTTCTTCTGCCT+CGG | + | chr4.3:86124814-86124833 | MS.gene60041:CDS | 40.0% | |
| TCGGGGAAAAATTCAAATCC+AGG | - | chr4.3:86125431-86125450 | None:intergenic | 40.0% | |
| TCGTAATCTGAATCAGGTTC+TGG | - | chr4.3:86124886-86124905 | None:intergenic | 40.0% | |
| TCTTGCCTTCTCCAAATCAA+TGG | - | chr4.3:86123126-86123145 | None:intergenic | 40.0% | |
| TGATCATCCGGAAATGTTAC+CGG | - | chr4.3:86124319-86124338 | None:intergenic | 40.0% | |
| TGGTGAGGAAATTGATAGGT+GGG | + | chr4.3:86123319-86123338 | MS.gene60041:CDS | 40.0% | |
| TGTCTTGCAGCTAAATGGTA+GGG | - | chr4.3:86125176-86125195 | None:intergenic | 40.0% | |
| TTAACTTTGAGCAACGATGG+AGG | + | chr4.3:86124227-86124246 | MS.gene60041:CDS | 40.0% | |
| TTACAAATTAGGCATGGCAG+TGG | - | chr4.3:86122524-86122543 | None:intergenic | 40.0% | |
| TTACCAAGATTCTCATGTGC+CGG | + | chr4.3:86123517-86123536 | MS.gene60041:CDS | 40.0% | |
| TTCGGTATAAACAGACCAAC+CGG | - | chr4.3:86123654-86123673 | None:intergenic | 40.0% | |
| TTCTATTATTCCTCCATCCC+CGG | + | chr4.3:86124297-86124316 | MS.gene60041:CDS | 40.0% | |
| ! | AAGAAAGTATACGGAACTCC+AGG | - | chr4.3:86123467-86123486 | None:intergenic | 40.0% |
| ! | ATGGTTTTCGCATGGCATTA+TGG | + | chr4.3:86125216-86125235 | MS.gene60041:CDS | 40.0% |
| ! | ATTGAGGAAACTGTTGGTCT+TGG | + | chr4.3:86123074-86123093 | MS.gene60041:CDS | 40.0% |
| ! | CCACCAGAAAGTGGTATTTT+AGG | - | chr4.3:86123554-86123573 | None:intergenic | 40.0% |
| ! | CTTCTGGTGATGAGTAAACA+TGG | - | chr4.3:86123948-86123967 | None:intergenic | 40.0% |
| ! | GCCTAATTTGTAACAGATGG+TGG | + | chr4.3:86122531-86122550 | MS.gene60041:intron | 40.0% |
| ! | GTTGATAAGCTTAATGCTGG+TGG | + | chr4.3:86122010-86122029 | MS.gene60041:CDS | 40.0% |
| ! | TCAGTGTTATCGATTGCAGA+TGG | - | chr4.3:86122616-86122635 | None:intergenic | 40.0% |
| ! | TGATAGGTGGGTGGAAATTT+TGG | + | chr4.3:86123331-86123350 | MS.gene60041:CDS | 40.0% |
| !! | CATGTGTTTTGCATTGGTGA+TGG | - | chr4.3:86123621-86123640 | None:intergenic | 40.0% |
| !! | GAAACTGTTGGTCTTGGAAA+GGG | + | chr4.3:86123080-86123099 | MS.gene60041:CDS | 40.0% |
| !! | GAGGTTGATAAGCTTAATGC+TGG | + | chr4.3:86122007-86122026 | MS.gene60041:CDS | 40.0% |
| !! | TGCATCGGTTCAAGCAATAT+TGG | + | chr4.3:86124705-86124724 | MS.gene60041:CDS | 40.0% |
| !! | TGCTACCATTGATTTGGAGA+AGG | + | chr4.3:86123118-86123137 | MS.gene60041:CDS | 40.0% |
| AACAACACATCCCAAGCGAT+CGG | - | chr4.3:86124208-86124227 | None:intergenic | 45.0% | |
| AAGTCTCATCACAGATTCGC+TGG | - | chr4.3:86122338-86122357 | None:intergenic | 45.0% | |
| AATCACAAAAGGCGGTCCAA+GGG | + | chr4.3:86124147-86124166 | MS.gene60041:CDS | 45.0% | |
| ACAGTGAATTACCTGGTGGA+AGG | + | chr4.3:86123981-86124000 | MS.gene60041:CDS | 45.0% | |
| AGCTAAATGGTAGGGCTGAT+AGG | - | chr4.3:86125168-86125187 | None:intergenic | 45.0% | |
| AGCTGGGCTTATTAGTGGAA+AGG | + | chr4.3:86124423-86124442 | MS.gene60041:CDS | 45.0% | |
| ATCATCCGGAAATGTTACCG+GGG | - | chr4.3:86124317-86124336 | None:intergenic | 45.0% | |
| ATTGCAGCACCTGGAAAGTT+AGG | - | chr4.3:86124130-86124149 | None:intergenic | 45.0% | |
| CACAGATCCTAAAAGCAAGC+AGG | - | chr4.3:86122244-86122263 | None:intergenic | 45.0% | |
| CAGCATCTTCAGGAGTTTCT+GGG | - | chr4.3:86124399-86124418 | None:intergenic | 45.0% | |
| CCGATTAAAGTTGCTCCAAC+AGG | - | chr4.3:86123266-86123285 | None:intergenic | 45.0% | |
| CCTTCACTAGCAACTCCAAT+CGG | - | chr4.3:86125392-86125411 | None:intergenic | 45.0% | |
| CGGTTCAAGCAATATTGGAC+TGG | + | chr4.3:86124710-86124729 | MS.gene60041:CDS | 45.0% | |
| CTCACAGAGGAAAGGATGTA+AGG | + | chr4.3:86123487-86123506 | MS.gene60041:CDS | 45.0% | |
| CTGTCTTGCAGCTAAATGGT+AGG | - | chr4.3:86125177-86125196 | None:intergenic | 45.0% | |
| GAAACCGCACAGTTCTTTGA+AGG | + | chr4.3:86123845-86123864 | MS.gene60041:CDS | 45.0% | |
| GATAAGCTTAATGCTGGTGG+TGG | + | chr4.3:86122013-86122032 | MS.gene60041:CDS | 45.0% | |
| GATCATCCGGAAATGTTACC+GGG | - | chr4.3:86124318-86124337 | None:intergenic | 45.0% | |
| GATTTGGAGAAGGCAAGAGT+GGG | + | chr4.3:86123128-86123147 | MS.gene60041:CDS | 45.0% | |
| GCAAGACTTATGAGCCTCAT+CGG | + | chr4.3:86123573-86123592 | MS.gene60041:CDS | 45.0% | |
| GCATTATGGTATGAGCACCT+TGG | + | chr4.3:86125230-86125249 | MS.gene60041:CDS | 45.0% | |
| GCTCTCTCGTAATCTGAATC+AGG | - | chr4.3:86124892-86124911 | None:intergenic | 45.0% | |
| GGATCACTGATGCATCAAAG+TGG | + | chr4.3:86122216-86122235 | MS.gene60041:intron | 45.0% | |
| GTTGTGGACAGTGAATTACC+TGG | + | chr4.3:86123974-86123993 | MS.gene60041:CDS | 45.0% | |
| TAAGTCTTGCCACCAGAAAG+TGG | - | chr4.3:86123563-86123582 | None:intergenic | 45.0% | |
| TATCCGGCACATGAGAATCT+TGG | - | chr4.3:86123523-86123542 | None:intergenic | 45.0% | |
| TCACCAGAAGATTGTGGTTG+TGG | + | chr4.3:86123958-86123977 | MS.gene60041:CDS | 45.0% | |
| TCCAAGCAAAAGAGCTTCCA+AGG | - | chr4.3:86124537-86124556 | None:intergenic | 45.0% | |
| TCTTCGAACCCTCTTGTATC+GGG | - | chr4.3:86123370-86123389 | None:intergenic | 45.0% | |
| TCTTTACTTCCCGATTACCG+AGG | - | chr4.3:86124834-86124853 | None:intergenic | 45.0% | |
| TGAATTACCTGGTGGAAGGT+CGG | + | chr4.3:86123985-86124004 | MS.gene60041:CDS | 45.0% | |
| TGAGCCACCTTAAAACTCCA+TGG | - | chr4.3:86122559-86122578 | None:intergenic | 45.0% | |
| TGAGGAAATTGATAGGTGGG+TGG | + | chr4.3:86123322-86123341 | MS.gene60041:CDS | 45.0% | |
| TGCTTCAGCACCTTACTCAT+TGG | + | chr4.3:86122818-86122837 | MS.gene60041:intron | 45.0% | |
| TGCTTTGCATCTCATCCCAA+AGG | + | chr4.3:86124588-86124607 | MS.gene60041:CDS | 45.0% | |
| TGGGATGATAGAACATCGGT+TGG | + | chr4.3:86123782-86123801 | MS.gene60041:CDS | 45.0% | |
| TGGTGGAAATTTCCTCAGCA+TGG | + | chr4.3:86122033-86122052 | MS.gene60041:CDS | 45.0% | |
| TGTACGTTGTTGTCCCAATG+TGG | + | chr4.3:86124662-86124681 | MS.gene60041:CDS | 45.0% | |
| TGTCCACAACCACAATCTTC+TGG | - | chr4.3:86123964-86123983 | None:intergenic | 45.0% | |
| TTCCATGTCTCGTGATCATC+CGG | - | chr4.3:86124331-86124350 | None:intergenic | 45.0% | |
| TTTCCTTGGTGAGGGATTCT+AGG | + | chr4.3:86123675-86123694 | MS.gene60041:CDS | 45.0% | |
| ! | CAGCAATCTGGTTCACCTTA+CGG | - | chr4.3:86125301-86125320 | None:intergenic | 45.0% |
| ! | CCAACGGGTTTGCAAATGAT+CGG | - | chr4.3:86122417-86122436 | None:intergenic | 45.0% |
| ! | CTGGTGATGAGTAAACATGG+TGG | - | chr4.3:86123945-86123964 | None:intergenic | 45.0% |
| ! | GTACACAGTGAACTTTTCCC+CGG | - | chr4.3:86124647-86124666 | None:intergenic | 45.0% |
| ! | GTGTTATCGATTGCAGATGG+CGG | - | chr4.3:86122613-86122632 | None:intergenic | 45.0% |
| ! | TCAAGTCCATGGTTTTCGCA+TGG | + | chr4.3:86125208-86125227 | MS.gene60041:CDS | 45.0% |
| ! | TCAGGTTCTGGTTGTTCAGA+AGG | - | chr4.3:86124874-86124893 | None:intergenic | 45.0% |
| ! | TCCTTGGAAGCTCTTTTGCT+TGG | + | chr4.3:86124533-86124552 | MS.gene60041:CDS | 45.0% |
| ! | TGAATTTTTCCCCGACACCA+AGG | + | chr4.3:86125436-86125455 | MS.gene60041:CDS | 45.0% |
| ! | TGATTTGGAGAAGGCAAGAG+TGG | + | chr4.3:86123127-86123146 | MS.gene60041:CDS | 45.0% |
| ! | TGCAAAGCACCAATGTCTTC+AGG | - | chr4.3:86124577-86124596 | None:intergenic | 45.0% |
| ! | TTATGAGCCTCATCGGTGTT+GGG | + | chr4.3:86123580-86123599 | MS.gene60041:CDS | 45.0% |
| !! | AAGCAATATTGGACTGGCAG+AGG | + | chr4.3:86124716-86124735 | MS.gene60041:CDS | 45.0% |
| !! | GGAAACTGTTGGTCTTGGAA+AGG | + | chr4.3:86123079-86123098 | MS.gene60041:CDS | 45.0% |
| !!! | GGCTCAAAATGACGGACTTT+TGG | + | chr4.3:86122573-86122592 | MS.gene60041:intron | 45.0% |
| !!! | AAAAAAAAAAAAGAATATTT+TGG | + | chr4.3:86122187-86122206 | MS.gene60041:intron | 5.0% |
| AAAGATCAATGGACGGAGCG+AGG | + | chr4.3:86125120-86125139 | MS.gene60041:CDS | 50.0% | |
| AACGATGGAGGAAGCAAGGT+GGG | + | chr4.3:86124239-86124258 | MS.gene60041:CDS | 50.0% | |
| AAGATCAATGGACGGAGCGA+GGG | + | chr4.3:86125121-86125140 | MS.gene60041:CDS | 50.0% | |
| AAGTAGTGAGGATAGGAGGG+AGG | - | chr4.3:86125490-86125509 | None:intergenic | 50.0% | |
| AGGAGTCATGAAGCATGCCA+AGG | - | chr4.3:86125250-86125269 | None:intergenic | 50.0% | |
| AGGATATCGTTCTGGCACTC+AGG | + | chr4.3:86124761-86124780 | MS.gene60041:CDS | 50.0% | |
| AGGGAATCGAGGAAGATCCT+CGG | + | chr4.3:86124788-86124807 | MS.gene60041:CDS | 50.0% | |
| AGTGGCCAAAATATCCGCCA+TGG | - | chr4.3:86122506-86122525 | None:intergenic | 50.0% | |
| ATATCCTCCCAACACCGATG+AGG | - | chr4.3:86123590-86123609 | None:intergenic | 50.0% | |
| ATGATGCTACCGCCATCATC+AGG | - | chr4.3:86123905-86123924 | None:intergenic | 50.0% | |
| ATGTCATGCCAAGGTTCCCT+TGG | - | chr4.3:86124166-86124185 | None:intergenic | 50.0% | |
| CAATCACAAAAGGCGGTCCA+AGG | + | chr4.3:86124146-86124165 | MS.gene60041:CDS | 50.0% | |
| CACTTGCTTCGCTATCCGAT+TGG | + | chr4.3:86125374-86125393 | MS.gene60041:CDS | 50.0% | |
| CATGAAACGTCGGGACTGTT+GGG | - | chr4.3:86124914-86124933 | None:intergenic | 50.0% | |
| CCGATCATTTGCAAACCCGT+TGG | + | chr4.3:86122414-86122433 | MS.gene60041:intron | 50.0% | |
| CCGATTGGAGTTGCTAGTGA+AGG | + | chr4.3:86125389-86125408 | MS.gene60041:CDS | 50.0% | |
| CGGGAATGAATGTCATGCCA+AGG | - | chr4.3:86124175-86124194 | None:intergenic | 50.0% | |
| CGTTCTTCTGCCTCGGTAAT+CGG | + | chr4.3:86124821-86124840 | MS.gene60041:CDS | 50.0% | |
| CTGGCTGTCTTGCAGCTAAA+TGG | - | chr4.3:86125181-86125200 | None:intergenic | 50.0% | |
| CTTATGAGCCTCATCGGTGT+TGG | + | chr4.3:86123579-86123598 | MS.gene60041:CDS | 50.0% | |
| GACATTCATTCCCGCCTTGA+AGG | + | chr4.3:86124181-86124200 | MS.gene60041:CDS | 50.0% | |
| GCAGCATCTTCAGGAGTTTC+TGG | - | chr4.3:86124400-86124419 | None:intergenic | 50.0% | |
| GCTTGAACCGATGCACTTTC+TGG | - | chr4.3:86124700-86124719 | None:intergenic | 50.0% | |
| GGATATCGTTCTGGCACTCA+GGG | + | chr4.3:86124762-86124781 | MS.gene60041:CDS | 50.0% | |
| GTGGACAGTGAATTACCTGG+TGG | + | chr4.3:86123977-86123996 | MS.gene60041:CDS | 50.0% | |
| GTTCTTCTGCCTCGGTAATC+GGG | + | chr4.3:86124822-86124841 | MS.gene60041:CDS | 50.0% | |
| TACCGCCATCATCAGGATTG+CGG | - | chr4.3:86123898-86123917 | None:intergenic | 50.0% | |
| TCATGAAACGTCGGGACTGT+TGG | - | chr4.3:86124915-86124934 | None:intergenic | 50.0% | |
| TCCATCCCCGGTAACATTTC+CGG | + | chr4.3:86124309-86124328 | MS.gene60041:CDS | 50.0% | |
| TCGCTCCGTCCATTGATCTT+TGG | - | chr4.3:86125121-86125140 | None:intergenic | 50.0% | |
| TTCCGGATGATCACGAGACA+TGG | + | chr4.3:86124326-86124345 | MS.gene60041:CDS | 50.0% | |
| ! | AAGAGCATATGTGCCTGTCG+AGG | + | chr4.3:86123286-86123305 | MS.gene60041:CDS | 50.0% |
| ! | ATTCTAGGAGGCCAAAGGCT+GGG | + | chr4.3:86123690-86123709 | MS.gene60041:CDS | 50.0% |
| ! | CCAGGTGCTGCAATCACAAA+AGG | + | chr4.3:86124136-86124155 | MS.gene60041:CDS | 50.0% |
| ! | CCTTTTGTGATTGCAGCACC+TGG | - | chr4.3:86124139-86124158 | None:intergenic | 50.0% |
| ! | CTCTTTTGCTTGGAGTGGTG+AGG | + | chr4.3:86124543-86124562 | MS.gene60041:CDS | 50.0% |
| ! | GGAAGCTCTTTTGCTTGGAG+TGG | + | chr4.3:86124538-86124557 | MS.gene60041:CDS | 50.0% |
| ! | GGTGCTGCAATCACAAAAGG+CGG | + | chr4.3:86124139-86124158 | MS.gene60041:CDS | 50.0% |
| !! | AAGCTTAATGCTGGTGGTGG+TGG | + | chr4.3:86122016-86122035 | MS.gene60041:CDS | 50.0% |
| !! | AGGGACTCTGAGATAGCGAT+GGG | + | chr4.3:86125140-86125159 | MS.gene60041:CDS | 50.0% |
| !! | AGTGGACCCTGCTTGCTTTT+AGG | + | chr4.3:86122234-86122253 | MS.gene60041:intron | 50.0% |
| !! | TGATGGCGGTAGCATCATTC+AGG | + | chr4.3:86123907-86123926 | MS.gene60041:CDS | 50.0% |
| !!! | ATTGATGGTGGGGCTGCTTT+TGG | + | chr4.3:86124370-86124389 | MS.gene60041:CDS | 50.0% |
| !!! | GGACTTTTGGCTTTCCACCA+TGG | + | chr4.3:86122586-86122605 | MS.gene60041:intron | 50.0% |
| !!! | TTGATGGTGGGGCTGCTTTT+GGG | + | chr4.3:86124371-86124390 | MS.gene60041:CDS | 50.0% |
| AAGCGATCGGTCCTTCAAGG+CGG | - | chr4.3:86124195-86124214 | None:intergenic | 55.0% | |
| ACCGCCATCATCAGGATTGC+GGG | - | chr4.3:86123897-86123916 | None:intergenic | 55.0% | |
| ACTCAGGGCAAAGGGAATCG+AGG | + | chr4.3:86124777-86124796 | MS.gene60041:CDS | 55.0% | |
| AGCATATGTGCCTGTCGAGG+AGG | + | chr4.3:86123289-86123308 | MS.gene60041:CDS | 55.0% | |
| AGCGAAGCAAGTGTCCAGGA+AGG | - | chr4.3:86125367-86125386 | None:intergenic | 55.0% | |
| ATGGAGGAAGCAAGGTGGGA+AGG | + | chr4.3:86124243-86124262 | MS.gene60041:CDS | 55.0% | |
| ATGTCACGAAAGACCGCAGC+TGG | + | chr4.3:86123414-86123433 | MS.gene60041:CDS | 55.0% | |
| CAACGATGGAGGAAGCAAGG+TGG | + | chr4.3:86124238-86124257 | MS.gene60041:CDS | 55.0% | |
| CCATTCAAGACCTCCTCGAC+AGG | - | chr4.3:86123302-86123321 | None:intergenic | 55.0% | |
| CCTCCTAGAATCCCTCACCA+AGG | - | chr4.3:86123681-86123700 | None:intergenic | 55.0% | |
| CCTGTCGAGGAGGTCTTGAA+TGG | + | chr4.3:86123299-86123318 | MS.gene60041:CDS | 55.0% | |
| CCTTGAAGGACCGATCGCTT+GGG | + | chr4.3:86124195-86124214 | MS.gene60041:CDS | 55.0% | |
| CCTTGGTGAGGGATTCTAGG+AGG | + | chr4.3:86123678-86123697 | MS.gene60041:CDS | 55.0% | |
| CGAGGAGGTCTTGAATGGTG+AGG | + | chr4.3:86123304-86123323 | MS.gene60041:CDS | 55.0% | |
| CTGAAGATGCTGCGAGAGCT+GGG | + | chr4.3:86124407-86124426 | MS.gene60041:CDS | 55.0% | |
| GACACCAAGGCTCGGATTCT+CGG | + | chr4.3:86125449-86125468 | MS.gene60041:CDS | 55.0% | |
| GAGCAACGATGGAGGAAGCA+AGG | + | chr4.3:86124235-86124254 | MS.gene60041:CDS | 55.0% | |
| GCGAGAGCTGGGCTTATTAG+TGG | + | chr4.3:86124418-86124437 | MS.gene60041:CDS | 55.0% | |
| GCTGGGGGAGACACAACAAT+TGG | + | chr4.3:86123707-86123726 | MS.gene60041:CDS | 55.0% | |
| GGAAATGTTACCGGGGATGG+AGG | - | chr4.3:86124310-86124329 | None:intergenic | 55.0% | |
| GGATAGCGAAGCAAGTGTCC+AGG | - | chr4.3:86125371-86125390 | None:intergenic | 55.0% | |
| GTTCTGGCACTCAGGGCAAA+GGG | + | chr4.3:86124769-86124788 | MS.gene60041:CDS | 55.0% | |
| GTTGTCCCAATGTGGCCAGA+GGG | + | chr4.3:86124670-86124689 | MS.gene60041:CDS | 55.0% | |
| TCACTTGAGCACGACCTTCC+TGG | + | chr4.3:86125350-86125369 | MS.gene60041:CDS | 55.0% | |
| TCCGGAAATGTTACCGGGGA+TGG | - | chr4.3:86124313-86124332 | None:intergenic | 55.0% | |
| TGGAGAAGGCAAGAGTGGGA+AGG | + | chr4.3:86123132-86123151 | MS.gene60041:CDS | 55.0% | |
| TGTCACGAAAGACCGCAGCT+GGG | + | chr4.3:86123415-86123434 | MS.gene60041:CDS | 55.0% | |
| TGTTGTCCCAATGTGGCCAG+AGG | + | chr4.3:86124669-86124688 | MS.gene60041:CDS | 55.0% | |
| ! | GAGAATCCGAGCCTTGGTGT+CGG | - | chr4.3:86125450-86125469 | None:intergenic | 55.0% |
| ! | GAGGGATTCTAGGAGGCCAA+AGG | + | chr4.3:86123685-86123704 | MS.gene60041:CDS | 55.0% |
| ! | GATTCTAGGAGGCCAAAGGC+TGG | + | chr4.3:86123689-86123708 | MS.gene60041:CDS | 55.0% |
| ! | GGACTGGCAGAGGAGAACAA+TGG | + | chr4.3:86124726-86124745 | MS.gene60041:CDS | 55.0% |
| ! | GGGTGTGCCAGAAAGTGCAT+CGG | + | chr4.3:86124690-86124709 | MS.gene60041:CDS | 55.0% |
| ! | GGTGGGGCCATGGAGTTTTA+AGG | + | chr4.3:86122549-86122568 | MS.gene60041:intron | 55.0% |
| ! | TTCTAGGAGGCCAAAGGCTG+GGG | + | chr4.3:86123691-86123710 | MS.gene60041:CDS | 55.0% |
| ! | TTTTCCCCGACACCAAGGCT+CGG | + | chr4.3:86125441-86125460 | MS.gene60041:CDS | 55.0% |
| !! | AGAATCCGAGCCTTGGTGTC+GGG | - | chr4.3:86125449-86125468 | None:intergenic | 55.0% |
| !! | GAGGGACTCTGAGATAGCGA+TGG | + | chr4.3:86125139-86125158 | MS.gene60041:CDS | 55.0% |
| !! | TGTAACAGATGGTGGGGCCA+TGG | + | chr4.3:86122539-86122558 | MS.gene60041:intron | 55.0% |
| !!! | CAGCGCCATGGCGGATATTT+TGG | + | chr4.3:86122498-86122517 | MS.gene60041:intron | 55.0% |
| !!! | GGGGCCATGGAGTTTTAAGG+TGG | + | chr4.3:86122552-86122571 | MS.gene60041:intron | 55.0% |
| AAGGCGGTCCAAGGGAACCT+TGG | + | chr4.3:86124155-86124174 | MS.gene60041:CDS | 60.0% | |
| ACCAAGGCTCGGATTCTCGG+CGG | + | chr4.3:86125452-86125471 | MS.gene60041:CDS | 60.0% | |
| AGCGATCGGTCCTTCAAGGC+GGG | - | chr4.3:86124194-86124213 | None:intergenic | 60.0% | |
| CCAGCACGTGGTCAAGTCCA+TGG | + | chr4.3:86125197-86125216 | MS.gene60041:CDS | 60.0% | |
| CCAGCTCTCGCAGCATCTTC+AGG | - | chr4.3:86124409-86124428 | None:intergenic | 60.0% | |
| CCATGGACTTGACCACGTGC+TGG | - | chr4.3:86125200-86125219 | None:intergenic | 60.0% | |
| CCCAAGCGATCGGTCCTTCA+AGG | - | chr4.3:86124198-86124217 | None:intergenic | 60.0% | |
| CCGCCATCATCAGGATTGCG+GGG | - | chr4.3:86123896-86123915 | None:intergenic | 60.0% | |
| CCTGAAGATGCTGCGAGAGC+TGG | + | chr4.3:86124406-86124425 | MS.gene60041:CDS | 60.0% | |
| CGCCATCATCAGGATTGCGG+GGG | - | chr4.3:86123895-86123914 | None:intergenic | 60.0% | |
| CGCTTATCCGACCTTCCACC+AGG | - | chr4.3:86123995-86124014 | None:intergenic | 60.0% | |
| CGTTCTGGCACTCAGGGCAA+AGG | + | chr4.3:86124768-86124787 | MS.gene60041:CDS | 60.0% | |
| GCACACCCTCTGGCCACATT+GGG | - | chr4.3:86124678-86124697 | None:intergenic | 60.0% | |
| GCCTTGAAGGACCGATCGCT+TGG | + | chr4.3:86124194-86124213 | MS.gene60041:CDS | 60.0% | |
| GGAGATGTCACACAGCTGCC+TGG | + | chr4.3:86125410-86125429 | MS.gene60041:CDS | 60.0% | |
| GGGGGTCTCGACCTTTGTGA+TGG | + | chr4.3:86124034-86124053 | MS.gene60041:CDS | 60.0% | |
| GTTGTGTCTCCCCCAGCCTT+TGG | - | chr4.3:86123704-86123723 | None:intergenic | 60.0% | |
| TATCCGCCATGGCGCTGCTA+TGG | - | chr4.3:86122495-86122514 | None:intergenic | 60.0% | |
| TCTAGGAGGCCAAAGGCTGG+GGG | + | chr4.3:86123692-86123711 | MS.gene60041:CDS | 60.0% | |
| TGCCCCCGCAATCCTGATGA+TGG | + | chr4.3:86123890-86123909 | MS.gene60041:CDS | 60.0% | |
| ! | GCACTTTCTGGCACACCCTC+TGG | - | chr4.3:86124688-86124707 | None:intergenic | 60.0% |
| !! | CCCCGCAATCCTGATGATGG+CGG | + | chr4.3:86123893-86123912 | MS.gene60041:CDS | 60.0% |
| !! | CGATTGCAGATGGCGGACCA+TGG | - | chr4.3:86122606-86122625 | None:intergenic | 60.0% |
| !! | GAATCCGAGCCTTGGTGTCG+GGG | - | chr4.3:86125448-86125467 | None:intergenic | 60.0% |
| !! | TGAGCCTCATCGGTGTTGGG+AGG | + | chr4.3:86123583-86123602 | MS.gene60041:CDS | 60.0% |
| !! | TTGCAGATGGCGGACCATGG+TGG | - | chr4.3:86122603-86122622 | None:intergenic | 60.0% |
| AAAGACCGCAGCTGGGCTCG+AGG | + | chr4.3:86123422-86123441 | MS.gene60041:CDS | 65.0% | |
| GAATGCCTCGAGCCCAGCTG+CGG | - | chr4.3:86123430-86123449 | None:intergenic | 65.0% | |
| GCTGCAAGACAGCCAGCACG+TGG | + | chr4.3:86125185-86125204 | MS.gene60041:CDS | 65.0% | |
| GGCACACCCTCTGGCCACAT+TGG | - | chr4.3:86124679-86124698 | None:intergenic | 65.0% | |
| TGTCGGCCATAGCAGCGCCA+TGG | + | chr4.3:86122486-86122505 | MS.gene60041:intron | 65.0% | |
| CGGCCATAGCAGCGCCATGG+CGG | + | chr4.3:86122489-86122508 | MS.gene60041:intron | 70.0% | |
| GCCGCCGAGAATCCGAGCCT+TGG | - | chr4.3:86125456-86125475 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 86121962 | 86125511 | 86121962 | ID=MS.gene60041 |
| chr4.3 | mRNA | 86121962 | 86125511 | 86121962 | ID=MS.gene60041.t1;Parent=MS.gene60041 |
| chr4.3 | exon | 86121962 | 86122054 | 86121962 | ID=MS.gene60041.t1.exon1;Parent=MS.gene60041.t1 |
| chr4.3 | CDS | 86121962 | 86122054 | 86121962 | ID=cds.MS.gene60041.t1;Parent=MS.gene60041.t1 |
| chr4.3 | exon | 86123062 | 86124961 | 86123062 | ID=MS.gene60041.t1.exon2;Parent=MS.gene60041.t1 |
| chr4.3 | CDS | 86123062 | 86124961 | 86123062 | ID=cds.MS.gene60041.t1;Parent=MS.gene60041.t1 |
| chr4.3 | exon | 86125078 | 86125511 | 86125078 | ID=MS.gene60041.t1.exon3;Parent=MS.gene60041.t1 |
| chr4.3 | CDS | 86125078 | 86125511 | 86125078 | ID=cds.MS.gene60041.t1;Parent=MS.gene60041.t1 |
| Gene Sequence |
| Protein sequence |
