Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052689.t1 | XP_003627159.1 | 99.6 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 2.40E-266 | 927.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052689.t1 | Q9CAI5 | 74.4 | 469 | 112 | 6 | 1 | 466 | 1 | 464 | 2.4e-190 | 666.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052689.t1 | G7LI85 | 99.6 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 1.7e-266 | 927.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052689 | MS.gene37374 | 0.970516 | 9.78E-132 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene062739 | MS.gene052689 | PPI |
| MS.gene27364 | MS.gene052689 | PPI |
| MS.gene051853 | MS.gene052689 | PPI |
| MS.gene052689 | MS.gene24338 | PPI |
| MS.gene012266 | MS.gene052689 | PPI |
| MS.gene57575 | MS.gene052689 | PPI |
| MS.gene025139 | MS.gene052689 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052689.t1 | MTR_8g018310 | 99.578 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 0.0 | 973 |
| MS.gene052689.t1 | MTR_2g099670 | 83.438 | 477 | 74 | 5 | 1 | 474 | 1 | 475 | 0.0 | 809 |
| MS.gene052689.t1 | MTR_8g018310 | 99.735 | 378 | 1 | 0 | 1 | 378 | 1 | 378 | 0.0 | 787 |
| MS.gene052689.t1 | MTR_4g126010 | 75.314 | 478 | 90 | 7 | 1 | 474 | 1 | 454 | 0.0 | 690 |
| MS.gene052689.t1 | MTR_2g099670 | 81.250 | 416 | 73 | 5 | 62 | 474 | 10 | 423 | 0.0 | 684 |
| MS.gene052689.t1 | MTR_2g039930 | 68.723 | 470 | 142 | 4 | 1 | 469 | 1 | 466 | 0.0 | 653 |
| MS.gene052689.t1 | MTR_1g069720 | 60.000 | 475 | 155 | 8 | 1 | 465 | 1 | 450 | 0.0 | 547 |
| MS.gene052689.t1 | MTR_7g097160 | 77.538 | 325 | 64 | 3 | 1 | 318 | 1 | 323 | 0.0 | 540 |
| MS.gene052689.t1 | MTR_1g042280 | 79.180 | 317 | 63 | 2 | 1 | 314 | 2 | 318 | 0.0 | 540 |
| MS.gene052689.t1 | MTR_1g075870 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 519 |
| MS.gene052689.t1 | MTR_1g075870 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 516 |
| MS.gene052689.t1 | MTR_2g039930 | 66.324 | 389 | 126 | 4 | 82 | 469 | 1 | 385 | 0.0 | 513 |
| MS.gene052689.t1 | MTR_6g087070 | 77.926 | 299 | 65 | 1 | 1 | 298 | 1 | 299 | 1.32e-178 | 507 |
| MS.gene052689.t1 | MTR_8g102930 | 76.589 | 299 | 69 | 1 | 1 | 298 | 1 | 299 | 1.79e-174 | 496 |
| MS.gene052689.t1 | MTR_1g042280 | 79.496 | 278 | 54 | 2 | 40 | 314 | 9 | 286 | 4.64e-168 | 476 |
| MS.gene052689.t1 | MTR_3g110180 | 65.964 | 332 | 106 | 3 | 1 | 326 | 1 | 331 | 4.34e-162 | 465 |
| MS.gene052689.t1 | MTR_0492s0030 | 71.000 | 300 | 84 | 2 | 1 | 297 | 1 | 300 | 8.01e-161 | 460 |
| MS.gene052689.t1 | MTR_0543s0020 | 71.000 | 300 | 84 | 2 | 1 | 297 | 1 | 300 | 8.01e-161 | 460 |
| MS.gene052689.t1 | MTR_3g110180 | 65.964 | 332 | 105 | 4 | 1 | 326 | 1 | 330 | 2.22e-160 | 461 |
| MS.gene052689.t1 | MTR_1g004990 | 66.144 | 319 | 107 | 1 | 1 | 318 | 1 | 319 | 4.60e-160 | 460 |
| MS.gene052689.t1 | MTR_1g075870 | 81.250 | 240 | 44 | 1 | 58 | 296 | 2 | 241 | 9.95e-151 | 431 |
| MS.gene052689.t1 | MTR_7g097160 | 78.571 | 182 | 30 | 3 | 144 | 318 | 25 | 204 | 2.95e-98 | 299 |
| MS.gene052689.t1 | MTR_7g006030 | 37.276 | 279 | 157 | 6 | 9 | 272 | 37 | 312 | 6.75e-57 | 199 |
| MS.gene052689.t1 | MTR_7g085540 | 38.408 | 289 | 159 | 7 | 4 | 276 | 140 | 425 | 1.03e-56 | 200 |
| MS.gene052689.t1 | MTR_1g007150 | 37.828 | 267 | 154 | 6 | 9 | 266 | 124 | 387 | 3.40e-56 | 198 |
| MS.gene052689.t1 | MTR_3g110240 | 38.951 | 267 | 151 | 6 | 9 | 266 | 121 | 384 | 3.76e-56 | 198 |
| MS.gene052689.t1 | MTR_1g116210 | 37.956 | 274 | 157 | 6 | 9 | 272 | 119 | 389 | 1.14e-55 | 197 |
| MS.gene052689.t1 | MTR_8g014050 | 36.957 | 276 | 151 | 8 | 9 | 266 | 128 | 398 | 1.59e-50 | 182 |
| MS.gene052689.t1 | MTR_7g116400 | 58.462 | 65 | 26 | 1 | 82 | 145 | 3 | 67 | 2.02e-18 | 80.5 |
| MS.gene052689.t1 | MTR_5g022030 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.41e-13 | 73.2 |
| MS.gene052689.t1 | MTR_5g022030 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.72e-13 | 73.2 |
| MS.gene052689.t1 | MTR_5g007590 | 44.595 | 74 | 33 | 1 | 72 | 145 | 54 | 119 | 1.45e-12 | 65.1 |
| MS.gene052689.t1 | MTR_4g128820 | 31.447 | 159 | 98 | 5 | 1 | 153 | 2 | 155 | 7.22e-12 | 67.8 |
| MS.gene052689.t1 | MTR_3g466400 | 27.197 | 239 | 120 | 11 | 1 | 213 | 5 | 215 | 1.39e-11 | 66.6 |
| MS.gene052689.t1 | MTR_3g086120 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 7.60e-11 | 65.1 |
| MS.gene052689.t1 | MTR_3g086120 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 7.99e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052689.t1 | AT1G72710 | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| MS.gene052689.t1 | AT4G26100 | 69.979 | 473 | 112 | 9 | 1 | 470 | 1 | 446 | 0.0 | 652 |
| MS.gene052689.t1 | AT5G57015 | 69.538 | 476 | 101 | 9 | 1 | 474 | 1 | 434 | 0.0 | 644 |
| MS.gene052689.t1 | AT2G19470 | 69.533 | 407 | 102 | 5 | 1 | 404 | 1 | 388 | 0.0 | 573 |
| MS.gene052689.t1 | AT1G03930 | 60.970 | 474 | 173 | 6 | 1 | 467 | 1 | 469 | 0.0 | 542 |
| MS.gene052689.t1 | AT5G44100 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| MS.gene052689.t1 | AT5G44100 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| MS.gene052689.t1 | AT3G23340 | 64.096 | 415 | 135 | 6 | 1 | 414 | 1 | 402 | 0.0 | 531 |
| MS.gene052689.t1 | AT4G28540 | 73.620 | 326 | 78 | 2 | 1 | 318 | 5 | 330 | 0.0 | 520 |
| MS.gene052689.t1 | AT4G14340 | 63.260 | 411 | 137 | 5 | 1 | 410 | 7 | 404 | 0.0 | 519 |
| MS.gene052689.t1 | AT5G43320 | 56.495 | 485 | 186 | 9 | 1 | 469 | 1 | 476 | 0.0 | 517 |
| MS.gene052689.t1 | AT4G14340 | 78.788 | 297 | 62 | 1 | 1 | 296 | 7 | 303 | 0.0 | 511 |
| MS.gene052689.t1 | AT1G04440 | 69.940 | 336 | 100 | 1 | 1 | 335 | 1 | 336 | 3.19e-179 | 510 |
| MS.gene052689.t1 | AT5G43320 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.79e-177 | 501 |
| MS.gene052689.t1 | AT5G43320 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.79e-177 | 501 |
| MS.gene052689.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene052689.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene052689.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene052689.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene052689.t1 | AT3G23340 | 63.291 | 395 | 131 | 6 | 21 | 414 | 7 | 388 | 7.09e-175 | 498 |
| MS.gene052689.t1 | AT4G28860 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 3.08e-172 | 489 |
| MS.gene052689.t1 | AT4G28860 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 1.37e-171 | 489 |
| MS.gene052689.t1 | AT4G08800 | 68.525 | 305 | 63 | 3 | 1 | 304 | 1 | 273 | 3.14e-153 | 437 |
| MS.gene052689.t1 | AT2G25760 | 39.146 | 281 | 153 | 6 | 4 | 266 | 100 | 380 | 4.25e-61 | 211 |
| MS.gene052689.t1 | AT2G25760 | 38.434 | 281 | 152 | 7 | 4 | 266 | 100 | 377 | 5.57e-58 | 203 |
| MS.gene052689.t1 | AT3G03940 | 38.408 | 289 | 159 | 7 | 4 | 276 | 133 | 418 | 4.33e-56 | 198 |
| MS.gene052689.t1 | AT5G18190 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 4.94e-56 | 198 |
| MS.gene052689.t1 | AT5G18190 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 4.94e-56 | 198 |
| MS.gene052689.t1 | AT3G13670 | 36.042 | 283 | 163 | 6 | 9 | 276 | 137 | 416 | 2.25e-54 | 194 |
| MS.gene052689.t1 | AT2G17890 | 25.893 | 224 | 150 | 8 | 7 | 222 | 106 | 321 | 7.85e-13 | 71.2 |
| MS.gene052689.t1 | AT3G50530 | 25.532 | 235 | 135 | 8 | 5 | 218 | 144 | 359 | 6.92e-12 | 68.2 |
| MS.gene052689.t1 | AT5G39440 | 29.245 | 212 | 128 | 10 | 9 | 212 | 19 | 216 | 2.68e-11 | 66.2 |
| MS.gene052689.t1 | AT3G06030 | 26.941 | 219 | 134 | 7 | 8 | 212 | 67 | 273 | 6.58e-11 | 65.1 |
| MS.gene052689.t1 | AT3G29160 | 29.577 | 213 | 127 | 11 | 9 | 212 | 20 | 218 | 6.80e-11 | 64.3 |
| MS.gene052689.t1 | AT4G36070 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.45e-11 | 64.3 |
| MS.gene052689.t1 | AT4G36070 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.56e-11 | 64.3 |
Find 114 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCAAACATAAATAATT+TGG | 0.143188 | 8.1:-79867366 | MS.gene052689:CDS |
| GACAATTTCCTCATGGGTTT+AGG | 0.228856 | 8.1:-79870241 | MS.gene052689:CDS |
| ATTTATTCAATTTCTGTAAT+AGG | 0.238085 | 8.1:-79870444 | MS.gene052689:CDS |
| TTCTTCATTTGTCTGAATAT+TGG | 0.261094 | 8.1:+79871411 | None:intergenic |
| GGAAAAGATGGTAGGAATAT+TGG | 0.271839 | 8.1:-79867894 | MS.gene052689:CDS |
| AAAATTGGTAGCGGATCTTT+TGG | 0.312915 | 8.1:-79871537 | MS.gene052689:CDS |
| CTCACGCTGGATTCAAGTTT+AGG | 0.327718 | 8.1:-79867470 | MS.gene052689:CDS |
| CTTGCTGCTGGACCGAGTTC+TGG | 0.338183 | 8.1:-79868141 | MS.gene052689:CDS |
| ACAATTTCCTCATGGGTTTA+GGG | 0.340991 | 8.1:-79870240 | MS.gene052689:CDS |
| GAAAAGATGGTAGGAATATT+GGG | 0.370564 | 8.1:-79867893 | MS.gene052689:CDS |
| ATGAATACTCATCTTGGAAT+TGG | 0.372690 | 8.1:-79869068 | MS.gene052689:intron |
| ACCTCAGTGACCGACAATAA+TGG | 0.388781 | 8.1:+79868591 | None:intergenic |
| TTTCTGCAGTCTACCTTGGC+AGG | 0.394985 | 8.1:-79868823 | MS.gene052689:intron |
| TATCGAGTTCGAATTTCTTT+CGG | 0.396736 | 8.1:-79867577 | MS.gene052689:CDS |
| CACTTACAGGGTCTTGCTGC+TGG | 0.397023 | 8.1:-79868153 | MS.gene052689:intron |
| CTTCATACTTCCATTATTGT+CGG | 0.399001 | 8.1:-79868601 | MS.gene052689:CDS |
| AATCGAAGACATAATCAAAC+TGG | 0.405895 | 8.1:+79868318 | None:intergenic |
| CCAAACCTTCACGGATGAAT+AGG | 0.413827 | 8.1:+79868522 | None:intergenic |
| GGTTTAATGGAACCTCGAAT+TGG | 0.417126 | 8.1:-79871582 | None:intergenic |
| ATGCCATAAAAGTACCTATA+GGG | 0.418213 | 8.1:+79870044 | None:intergenic |
| AATTTGGATTCAACGCTTAG+AGG | 0.429713 | 8.1:-79867350 | MS.gene052689:CDS |
| GCTAGTATGAATACTCATCT+TGG | 0.435171 | 8.1:-79869074 | MS.gene052689:CDS |
| AAGATTCCATCATTAGCAAT+AGG | 0.437123 | 8.1:+79867831 | None:intergenic |
| TTGGAAATAAGTTCCGTCTT+GGG | 0.443286 | 8.1:-79871563 | MS.gene052689:CDS |
| ACACCGGACCATTTCACATT+CGG | 0.447768 | 8.1:+79870520 | None:intergenic |
| CACCATAGCATCTTTAGATC+CGG | 0.452993 | 8.1:+79867773 | None:intergenic |
| ATACAACAATTGAGGGTGCT+TGG | 0.454552 | 8.1:+79870696 | None:intergenic |
| TCTTATGCTTGCCGATCAAA+TGG | 0.457248 | 8.1:-79870401 | MS.gene052689:intron |
| AGTTTGATTATGTCTTCGAT+TGG | 0.461696 | 8.1:-79868316 | MS.gene052689:CDS |
| TTTGCTTCATACAACAATTG+AGG | 0.464158 | 8.1:+79870688 | None:intergenic |
| TCTGGACCTATTGCTAATGA+TGG | 0.466720 | 8.1:-79867837 | MS.gene052689:CDS |
| TTGCTTCATACAACAATTGA+GGG | 0.471529 | 8.1:+79870689 | None:intergenic |
| ATCCTTGTGATGGATTTACT+TGG | 0.473724 | 8.1:-79870481 | MS.gene052689:CDS |
| CCACTTACAAATGACTTAAC+CGG | 0.474625 | 8.1:-79867792 | MS.gene052689:CDS |
| GAAAGTTTCTACATCTATTG+AGG | 0.478508 | 8.1:-79868751 | MS.gene052689:intron |
| CTGGAATACCGAATGTGAAA+TGG | 0.479886 | 8.1:-79870528 | MS.gene052689:CDS |
| GCAAATGCTGATGGACAGTC+AGG | 0.482487 | 8.1:-79868102 | MS.gene052689:intron |
| CCCACTCGAAGGAGAACCTC+TGG | 0.486536 | 8.1:-79867855 | MS.gene052689:CDS |
| CCGGTTAAGTCATTTGTAAG+TGG | 0.488016 | 8.1:+79867792 | None:intergenic |
| ATTGGAAATAAGTTCCGTCT+TGG | 0.488327 | 8.1:-79871564 | MS.gene052689:CDS |
| GAGCACAACCGAGTATCATC+TGG | 0.489104 | 8.1:-79867395 | MS.gene052689:CDS |
| CGGTTAAGTCATTTGTAAGT+GGG | 0.492030 | 8.1:+79867793 | None:intergenic |
| CTAGCTTCTGCAAATGCTGA+TGG | 0.497772 | 8.1:-79868111 | MS.gene052689:CDS |
| AGGGATGATTTAGAGTCGCT+TGG | 0.498396 | 8.1:-79868948 | MS.gene052689:CDS |
| GGTATTTCTGCAGTCTACCT+TGG | 0.499822 | 8.1:-79868827 | MS.gene052689:intron |
| TCGAATTTCTTTCGGTCAAG+TGG | 0.500221 | 8.1:-79867569 | MS.gene052689:CDS |
| CACATCAGCATATTCCCTAT+AGG | 0.500725 | 8.1:-79870058 | MS.gene052689:intron |
| TTTACTTGGCCCTAGTCTTG+AGG | 0.502228 | 8.1:-79870467 | MS.gene052689:CDS |
| CGGAACTTATTTCCAATTCG+AGG | 0.504125 | 8.1:+79871570 | None:intergenic |
| TGTTTCTTCCAGATGATACT+CGG | 0.516048 | 8.1:+79867387 | None:intergenic |
| AAGCCAGACAATTTCCTCAT+GGG | 0.517628 | 8.1:-79870247 | MS.gene052689:CDS |
| TAGGTGTACATCATTGACTT+TGG | 0.518918 | 8.1:-79870107 | MS.gene052689:CDS |
| TTGAATAAATCCTCAAGACT+AGG | 0.522442 | 8.1:+79870457 | None:intergenic |
| CTCCTCTCGTCCTCTCACGC+TGG | 0.525433 | 8.1:-79867483 | MS.gene052689:CDS |
| AAACCCATGAGGAAATTGTC+TGG | 0.531680 | 8.1:+79870244 | None:intergenic |
| GGAGCAGTCCGTAAAAGCTC+TGG | 0.533818 | 8.1:-79867449 | MS.gene052689:CDS |
| AACCGGATCTAAAGATGCTA+TGG | 0.540198 | 8.1:-79867775 | MS.gene052689:intron |
| AAAGCCAGACAATTTCCTCA+TGG | 0.544831 | 8.1:-79870248 | MS.gene052689:CDS |
| TGAATAAATCCTCAAGACTA+GGG | 0.545896 | 8.1:+79870458 | None:intergenic |
| TTCTGCAGTCTACCTTGGCA+GGG | 0.547539 | 8.1:-79868822 | MS.gene052689:intron |
| AAACAAGGCCCAAACCTTCA+CGG | 0.553845 | 8.1:+79868513 | None:intergenic |
| CAGCGTGAGAGGACGAGAGG+AGG | 0.553851 | 8.1:+79867484 | None:intergenic |
| CGTGACCTATTCATCCGTGA+AGG | 0.553976 | 8.1:-79868527 | MS.gene052689:intron |
| CAGAGAGAATAAGAATCTGA+CGG | 0.555069 | 8.1:-79869111 | MS.gene052689:CDS |
| AGCGTGAGAGGACGAGAGGA+GGG | 0.556937 | 8.1:+79867485 | None:intergenic |
| GAAGTATGAAGCAAATTCTG+AGG | 0.560679 | 8.1:+79868613 | None:intergenic |
| TGTGTAGGTGGTGGAAAAGA+TGG | 0.562910 | 8.1:-79867906 | MS.gene052689:intron |
| GTGAAATGGTCCGGTGTGGA+AGG | 0.568781 | 8.1:-79870514 | MS.gene052689:CDS |
| AAACTTGAATCCAGCGTGAG+AGG | 0.575553 | 8.1:+79867473 | None:intergenic |
| TCCAGAGGTTCTCCTTCGAG+TGG | 0.576149 | 8.1:+79867854 | None:intergenic |
| AAGTTCACATATCATGTCAT+CGG | 0.576819 | 8.1:-79867417 | MS.gene052689:CDS |
| AGAGTACAACATCCTTGTGA+TGG | 0.579202 | 8.1:-79870491 | MS.gene052689:CDS |
| AGCAGCCGTGATGCAGCTGT+TGG | 0.579930 | 8.1:-79867521 | MS.gene052689:CDS |
| ATCATTAGCAATAGGTCCAG+AGG | 0.580010 | 8.1:+79867839 | None:intergenic |
| AGGGAAACCCACCATTTGAT+CGG | 0.583445 | 8.1:+79870390 | None:intergenic |
| CCTTGGCAGGGATTGAAAGC+AGG | 0.584404 | 8.1:-79868810 | MS.gene052689:CDS |
| AGAGAGAATAAGAATCTGAC+GGG | 0.585309 | 8.1:-79869110 | MS.gene052689:CDS |
| CTTTGCTAGTCTCTCTGCCG+TGG | 0.586144 | 8.1:-79868641 | MS.gene052689:intron |
| CTTTAATAGAGCAAAGCCGT+AGG | 0.589565 | 8.1:-79868968 | MS.gene052689:intron |
| TTGATCGGCAAGCATAAGAA+CGG | 0.592423 | 8.1:+79870405 | None:intergenic |
| ATACCGAATGTGAAATGGTC+CGG | 0.593452 | 8.1:-79870523 | MS.gene052689:CDS |
| ACCATCACTTACAATACCAC+GGG | 0.602147 | 8.1:+79868250 | None:intergenic |
| TTTAATAGAGCAAAGCCGTA+GGG | 0.604857 | 8.1:-79868967 | MS.gene052689:intron |
| CACCATCACTTACAATACCA+CGG | 0.605886 | 8.1:+79868249 | None:intergenic |
| GGTTAAGTCATTTGTAAGTG+GGG | 0.606360 | 8.1:+79867794 | None:intergenic |
| GTCTGCATTTAAACGATGAG+AGG | 0.609688 | 8.1:-79867319 | MS.gene052689:CDS |
| CTTCGTCTGATCCCACTCGA+AGG | 0.610986 | 8.1:-79867866 | MS.gene052689:CDS |
| AAGCTGTATAAAATACTGCA+AGG | 0.612393 | 8.1:-79870667 | MS.gene052689:CDS |
| ATCGCCACTCCTCCTTCCCG+TGG | 0.613928 | 8.1:-79868266 | MS.gene052689:CDS |
| CCTGCTTTCAATCCCTGCCA+AGG | 0.616580 | 8.1:+79868810 | None:intergenic |
| CCAGAGGTTCTCCTTCGAGT+GGG | 0.619887 | 8.1:+79867855 | None:intergenic |
| ATCCAGCGTGAGAGGACGAG+AGG | 0.620493 | 8.1:+79867481 | None:intergenic |
| TCCATTATTGTCGGTCACTG+AGG | 0.621842 | 8.1:-79868592 | MS.gene052689:CDS |
| TTCGGTCAAGTGGATCTGCA+AGG | 0.626728 | 8.1:-79867559 | MS.gene052689:CDS |
| TGCAGCTGTTGGCAGTGAGA+CGG | 0.627439 | 8.1:-79867510 | MS.gene052689:CDS |
| ATTTCCTCATGGGTTTAGGG+AGG | 0.628140 | 8.1:-79870237 | MS.gene052689:CDS |
| CTTACAATACCACGGGAAGG+AGG | 0.631667 | 8.1:+79868257 | None:intergenic |
| AATACCACGGGAAGGAGGAG+TGG | 0.634617 | 8.1:+79868262 | None:intergenic |
| TCTGCATTTAAACGATGAGA+GGG | 0.635819 | 8.1:-79867318 | MS.gene052689:CDS |
| AAGTATGAAGCAAATTCTGA+GGG | 0.637275 | 8.1:+79868614 | None:intergenic |
| GCGACTCTAAATCATCCCTA+CGG | 0.637624 | 8.1:+79868952 | None:intergenic |
| TCAAGTGGATCTGCAAGGCG+AGG | 0.638769 | 8.1:-79867554 | MS.gene052689:CDS |
| TCAGCATTTGCAGAAGCTAG+CGG | 0.639218 | 8.1:+79868114 | None:intergenic |
| TAGGTGGTGGAAAAGATGGT+AGG | 0.644820 | 8.1:-79867902 | MS.gene052689:CDS |
| GCTAGCGGCAGACCAGAACT+CGG | 0.647842 | 8.1:+79868129 | None:intergenic |
| GTTGTACTCTCCTTCCACAC+CGG | 0.649985 | 8.1:+79870504 | None:intergenic |
| CACTGCCAACAGCTGCATCA+CGG | 0.650486 | 8.1:+79867516 | None:intergenic |
| GGCCAAGTAAATCCATCACA+AGG | 0.666479 | 8.1:+79870479 | None:intergenic |
| TCACTTACAATACCACGGGA+AGG | 0.675431 | 8.1:+79868254 | None:intergenic |
| CAAATTCTGAGGGATAGCCA+CGG | 0.686783 | 8.1:+79868624 | None:intergenic |
| GAATGTGAAATGGTCCGGTG+TGG | 0.716403 | 8.1:-79870518 | MS.gene052689:CDS |
| CACGCCTCCCTAAACCCATG+AGG | 0.721724 | 8.1:+79870233 | None:intergenic |
| AAGATGGTAGGAATATTGGG+TGG | 0.729848 | 8.1:-79867890 | MS.gene052689:CDS |
| CTGTATAAAATACTGCAAGG+AGG | 0.737729 | 8.1:-79870664 | MS.gene052689:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCCAAAAATAAAATATAAAT+AGG | + | chr8.1:79870397-79870416 | None:intergenic | 10.0% |
| !!! | TCCTATTTATATTTTATTTT+TGG | - | chr8.1:79870393-79870412 | MS.gene052689:intron | 10.0% |
| !!! | TTAAGTTATTTAATTTTTAG+TGG | - | chr8.1:79870693-79870712 | MS.gene052689:CDS | 10.0% |
| !!! | TTTTTATTCTTTTGAATTTT+TGG | - | chr8.1:79867554-79867573 | MS.gene052689:CDS | 10.0% |
| !! | AAAAACTAATTGATACTTAA+TGG | + | chr8.1:79869457-79869476 | None:intergenic | 15.0% |
| !! | AAAATATAAATAGGAAAACA+AGG | + | chr8.1:79870388-79870407 | None:intergenic | 15.0% |
| !! | AAATAAAGTAATGATTGATT+AGG | - | chr8.1:79867888-79867907 | MS.gene052689:CDS | 15.0% |
| !! | ATTTATTCAATTTCTGTAAT+AGG | - | chr8.1:79868439-79868458 | MS.gene052689:intron | 15.0% |
| !! | GATTACCAAAATAATATTAA+AGG | + | chr8.1:79869336-79869355 | None:intergenic | 15.0% |
| !! | GTGAATAAAAAGTTATTAAA+AGG | - | chr8.1:79869551-79869570 | MS.gene052689:intron | 15.0% |
| !!! | AATGATTTTAAAAGACATAA+TGG | + | chr8.1:79870204-79870223 | None:intergenic | 15.0% |
| !!! | TCATTTTCTTTTTCAAAATT+CGG | + | chr8.1:79867521-79867540 | None:intergenic | 15.0% |
| !!! | TGAATCCTTTAATATTATTT+TGG | - | chr8.1:79869328-79869347 | MS.gene052689:intron | 15.0% |
| !!! | TTTTGTAAAATCTATTATCA+TGG | - | chr8.1:79868949-79868968 | MS.gene052689:CDS | 15.0% |
| !! | AATAAATAATCGTAAAGACT+AGG | + | chr8.1:79869654-79869673 | None:intergenic | 20.0% |
| !! | AGTTATTATGTTTGTAAGTA+TGG | + | chr8.1:79869293-79869312 | None:intergenic | 20.0% |
| !! | CACATCAAACATAAATAATT+TGG | - | chr8.1:79871517-79871536 | MS.gene052689:intron | 20.0% |
| !! | GAATTTATGCCAATTAAATT+TGG | - | chr8.1:79869575-79869594 | MS.gene052689:intron | 20.0% |
| !! | TAAATTTACGAACTGATATT+TGG | - | chr8.1:79867968-79867987 | MS.gene052689:intron | 20.0% |
| !! | TAACAAATGAAAATCATTCA+AGG | + | chr8.1:79870930-79870949 | None:intergenic | 20.0% |
| !! | TGTCAAATGCTAAATAATAA+AGG | + | chr8.1:79870006-79870025 | None:intergenic | 20.0% |
| !! | TTGATTGTATACCTATTATA+TGG | + | chr8.1:79869389-79869408 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTTTGTTTGATTC+AGG | - | chr8.1:79868152-79868171 | MS.gene052689:intron | 20.0% |
| !!! | CATTTGACATATCTTTTAAT+TGG | - | chr8.1:79870017-79870036 | MS.gene052689:intron | 20.0% |
| !!! | CATTTTCTTTTTCAAAATTC+GGG | + | chr8.1:79867520-79867539 | None:intergenic | 20.0% |
| !!! | GTTCTTATGTATTTTTTAAG+AGG | - | chr8.1:79869962-79869981 | MS.gene052689:intron | 20.0% |
| !!! | TCAATAACAACAAAAGTATT+CGG | + | chr8.1:79867592-79867611 | None:intergenic | 20.0% |
| !!! | TTAAAATCATTGTTGATTGT+GGG | - | chr8.1:79870213-79870232 | MS.gene052689:intron | 20.0% |
| !!! | TTATGTATTTTTTAAGAGGA+AGG | - | chr8.1:79869966-79869985 | MS.gene052689:intron | 20.0% |
| !!! | TTTAAAATCATTGTTGATTG+TGG | - | chr8.1:79870212-79870231 | MS.gene052689:intron | 20.0% |
| !!! | TTTTGTTGTTGTGAATTTTA+GGG | - | chr8.1:79867421-79867440 | MS.gene052689:CDS | 20.0% |
| !!! | TTTTTGTTGTTGTGAATTTT+AGG | - | chr8.1:79867420-79867439 | MS.gene052689:CDS | 20.0% |
| !!! | TTTTTTCTTTGTCATAGTTT+AGG | - | chr8.1:79870480-79870499 | MS.gene052689:CDS | 20.0% |
| ! | AAAGAGAAGTTAAAACAACA+AGG | + | chr8.1:79870810-79870829 | None:intergenic | 25.0% |
| ! | AAATCAATGGCTATTAAGAA+AGG | + | chr8.1:79869871-79869890 | None:intergenic | 25.0% |
| ! | AATACACAAATTCACTAAGT+TGG | + | chr8.1:79868255-79868274 | None:intergenic | 25.0% |
| ! | AATCAATGGCTATTAAGAAA+GGG | + | chr8.1:79869870-79869889 | None:intergenic | 25.0% |
| ! | AATTTGGACATCCATATAAT+AGG | - | chr8.1:79869375-79869394 | MS.gene052689:intron | 25.0% |
| ! | ATACACAAATTCACTAAGTT+GGG | + | chr8.1:79868254-79868273 | None:intergenic | 25.0% |
| ! | ATCACAAAAATGCAAGAAAT+TGG | + | chr8.1:79867399-79867418 | None:intergenic | 25.0% |
| ! | ATTGGATACTCTTTCTTATT+TGG | - | chr8.1:79870035-79870054 | MS.gene052689:intron | 25.0% |
| ! | CCAATGAAACCAAATTTAAT+TGG | + | chr8.1:79869587-79869606 | None:intergenic | 25.0% |
| ! | TATAACTTCAAATACCAAAC+CGG | + | chr8.1:79867926-79867945 | None:intergenic | 25.0% |
| ! | TATGGGATATTGAATTTCAT+TGG | - | chr8.1:79867708-79867727 | MS.gene052689:intron | 25.0% |
| ! | TCAGTTAAGTTAATGATTAC+TGG | - | chr8.1:79867861-79867880 | MS.gene052689:CDS | 25.0% |
| ! | TCCAACATCATATATGATTA+AGG | - | chr8.1:79871255-79871274 | MS.gene052689:intron | 25.0% |
| ! | TCCTTAATCATATATGATGT+TGG | + | chr8.1:79871259-79871278 | None:intergenic | 25.0% |
| ! | TTATTGAAGTTTGATGAGAA+GGG | - | chr8.1:79867605-79867624 | MS.gene052689:intron | 25.0% |
| ! | TTCTTCATTTGTCTGAATAT+TGG | + | chr8.1:79867475-79867494 | None:intergenic | 25.0% |
| ! | TTGAGACATTATAAGAAAAC+TGG | + | chr8.1:79868548-79868567 | None:intergenic | 25.0% |
| !! | ACAAAATAAGAAAGCATGAT+AGG | + | chr8.1:79868935-79868954 | None:intergenic | 25.0% |
| !! | CAAAATAAGAAAGCATGATA+GGG | + | chr8.1:79868934-79868953 | None:intergenic | 25.0% |
| !! | CCAATTAAATTTGGTTTCAT+TGG | - | chr8.1:79869584-79869603 | MS.gene052689:intron | 25.0% |
| !! | CTTAGTGAATTTGTGTATTT+TGG | - | chr8.1:79868256-79868275 | MS.gene052689:intron | 25.0% |
| !! | TTTGAAACAAAGAGTTGTAT+AGG | - | chr8.1:79867682-79867701 | MS.gene052689:intron | 25.0% |
| !! | TTTTCTGATTTTATTCAGCA+TGG | - | chr8.1:79868868-79868887 | MS.gene052689:intron | 25.0% |
| !!! | ATACCAAGTCATTTTTACAT+CGG | - | chr8.1:79868607-79868626 | MS.gene052689:CDS | 25.0% |
| !!! | CATTTTCAGGTAAAAATCAA+TGG | + | chr8.1:79869884-79869903 | None:intergenic | 25.0% |
| !!! | TGGCTTAAATGTTTTTTGTT+GGG | - | chr8.1:79868315-79868334 | MS.gene052689:CDS | 25.0% |
| !!! | TTAATTTGTGTTTTTGTTGC+AGG | - | chr8.1:79867447-79867466 | MS.gene052689:CDS | 25.0% |
| !!! | TTGGCTTAAATGTTTTTTGT+TGG | - | chr8.1:79868314-79868333 | MS.gene052689:CDS | 25.0% |
| AAAGAGTTGTATAGGCAATA+TGG | - | chr8.1:79867690-79867709 | MS.gene052689:intron | 30.0% | |
| AAGAAAATAGAATCAATGCC+AGG | + | chr8.1:79869156-79869175 | None:intergenic | 30.0% | |
| AAGAGTTGTATAGGCAATAT+GGG | - | chr8.1:79867691-79867710 | MS.gene052689:intron | 30.0% | |
| AAGATTCCATCATTAGCAAT+AGG | + | chr8.1:79871055-79871074 | None:intergenic | 30.0% | |
| AAGCTGTATAAAATACTGCA+AGG | - | chr8.1:79868216-79868235 | MS.gene052689:intron | 30.0% | |
| AAGTATGAAGCAAATTCTGA+GGG | + | chr8.1:79870272-79870291 | None:intergenic | 30.0% | |
| AAGTTCACATATCATGTCAT+CGG | - | chr8.1:79871466-79871485 | MS.gene052689:intron | 30.0% | |
| AATCGAAGACATAATCAAAC+TGG | + | chr8.1:79870568-79870587 | None:intergenic | 30.0% | |
| AATGGATCTTAGTTCAAACA+AGG | + | chr8.1:79869266-79869285 | None:intergenic | 30.0% | |
| AGGTAATTAGATGATTGATC+AGG | - | chr8.1:79867803-79867822 | MS.gene052689:CDS | 30.0% | |
| AGTTTGATTATGTCTTCGAT+TGG | - | chr8.1:79870567-79870586 | MS.gene052689:intron | 30.0% | |
| ATAACTTATGTTGCTGTAAG+TGG | - | chr8.1:79869692-79869711 | MS.gene052689:intron | 30.0% | |
| ATCATGGAAAATCCTATATC+TGG | - | chr8.1:79868965-79868984 | MS.gene052689:intron | 30.0% | |
| ATGAATACTCATCTTGGAAT+TGG | - | chr8.1:79869815-79869834 | MS.gene052689:intron | 30.0% | |
| ATGATAGGGAATATATCGAT+GGG | + | chr8.1:79868920-79868939 | None:intergenic | 30.0% | |
| ATTACAAGCTTATGCAATAC+AGG | + | chr8.1:79868516-79868535 | None:intergenic | 30.0% | |
| CTTCATACTTCCATTATTGT+CGG | - | chr8.1:79870282-79870301 | MS.gene052689:CDS | 30.0% | |
| GAAAAGATGGTAGGAATATT+GGG | - | chr8.1:79870990-79871009 | MS.gene052689:intron | 30.0% | |
| GAAAGTTTCTACATCTATTG+AGG | - | chr8.1:79870132-79870151 | MS.gene052689:intron | 30.0% | |
| GATTACTACTATTTAGTAGG+AGG | - | chr8.1:79869031-79869050 | MS.gene052689:intron | 30.0% | |
| GCTGATTACTACTATTTAGT+AGG | - | chr8.1:79869028-79869047 | MS.gene052689:intron | 30.0% | |
| GTTATTGAAGTTTGATGAGA+AGG | - | chr8.1:79867604-79867623 | MS.gene052689:intron | 30.0% | |
| TAATCGATACTTCGATTACA+AGG | + | chr8.1:79867776-79867795 | None:intergenic | 30.0% | |
| TACATCTATTGAGGTATGAT+TGG | - | chr8.1:79870141-79870160 | MS.gene052689:intron | 30.0% | |
| TAGACTTCATATTACTCACT+TGG | - | chr8.1:79868295-79868314 | MS.gene052689:CDS | 30.0% | |
| TATTGAAGTTTGATGAGAAG+GGG | - | chr8.1:79867606-79867625 | MS.gene052689:intron | 30.0% | |
| TGAATAAATCCTCAAGACTA+GGG | + | chr8.1:79868428-79868447 | None:intergenic | 30.0% | |
| TGATTAACCAAGTCTGATTA+TGG | + | chr8.1:79867844-79867863 | None:intergenic | 30.0% | |
| TTACAAGCTTATGCAATACA+GGG | + | chr8.1:79868515-79868534 | None:intergenic | 30.0% | |
| TTCATATTTGCCTCTTATGT+AGG | - | chr8.1:79868757-79868776 | MS.gene052689:CDS | 30.0% | |
| TTGAATAAATCCTCAAGACT+AGG | + | chr8.1:79868429-79868448 | None:intergenic | 30.0% | |
| TTGCTTCATACAACAATTGA+GGG | + | chr8.1:79868197-79868216 | None:intergenic | 30.0% | |
| TTTGCTTCATACAACAATTG+AGG | + | chr8.1:79868198-79868217 | None:intergenic | 30.0% | |
| ! | AAAATCCTATATCTGGAATC+TGG | - | chr8.1:79868972-79868991 | MS.gene052689:intron | 30.0% |
| ! | AACCTAAACTATGGTTTTCA+AGG | + | chr8.1:79870435-79870454 | None:intergenic | 30.0% |
| ! | AGCAAAAAACTCACATTTTC+AGG | + | chr8.1:79869897-79869916 | None:intergenic | 30.0% |
| ! | ATGGTGCGTGTTTTATATAT+GGG | - | chr8.1:79871127-79871146 | MS.gene052689:intron | 30.0% |
| ! | ATTCCCTATAGGTACTTTTA+TGG | - | chr8.1:79868836-79868855 | MS.gene052689:intron | 30.0% |
| ! | CTTTTCAGATAAGCATAATC+TGG | + | chr8.1:79870329-79870348 | None:intergenic | 30.0% |
| ! | TATGGTGCGTGTTTTATATA+TGG | - | chr8.1:79871126-79871145 | MS.gene052689:intron | 30.0% |
| ! | TTTGTTGGGTTTCTTTTCTT+TGG | - | chr8.1:79868329-79868348 | MS.gene052689:intron | 30.0% |
| !! | ATGCCATAAAAGTACCTATA+GGG | + | chr8.1:79868842-79868861 | None:intergenic | 30.0% |
| !! | TCATAGTTTAGGTTCTAGAT+GGG | - | chr8.1:79870491-79870510 | MS.gene052689:CDS | 30.0% |
| !! | TCTTTTGGAGAGATCTATTT+AGG | - | chr8.1:79867361-79867380 | MS.gene052689:CDS | 30.0% |
| !!! | TACCAAGTCATTTTTACATC+GGG | - | chr8.1:79868608-79868627 | MS.gene052689:CDS | 30.0% |
| !!! | TACCAGTGCATTTTTTAATG+TGG | - | chr8.1:79870948-79870967 | MS.gene052689:intron | 30.0% |
| AACATCCAGATTCCAGATAT+AGG | + | chr8.1:79868980-79868999 | None:intergenic | 35.0% | |
| AACTGATACATAACAAGCGT+TGG | + | chr8.1:79868738-79868757 | None:intergenic | 35.0% | |
| AATTTGGATTCAACGCTTAG+AGG | - | chr8.1:79871533-79871552 | MS.gene052689:CDS | 35.0% | |
| ACAATTTCCTCATGGGTTTA+GGG | - | chr8.1:79868643-79868662 | MS.gene052689:intron | 35.0% | |
| ACATAATCAAACTGGAATCC+TGG | + | chr8.1:79870560-79870579 | None:intergenic | 35.0% | |
| AGAGAGAATAAGAATCTGAC+GGG | - | chr8.1:79869773-79869792 | MS.gene052689:intron | 35.0% | |
| AGATTCTTATTCTCTCTGCA+AGG | + | chr8.1:79869770-79869789 | None:intergenic | 35.0% | |
| ATGATGTACACCTACATAAG+AGG | + | chr8.1:79868770-79868789 | None:intergenic | 35.0% | |
| ATTGGAAATAAGTTCCGTCT+TGG | - | chr8.1:79867319-79867338 | MS.gene052689:CDS | 35.0% | |
| CACCACATTAAAAAATGCAC+TGG | + | chr8.1:79870953-79870972 | None:intergenic | 35.0% | |
| CAGAGAGAATAAGAATCTGA+CGG | - | chr8.1:79869772-79869791 | MS.gene052689:intron | 35.0% | |
| CATGATAGGGAATATATCGA+TGG | + | chr8.1:79868921-79868940 | None:intergenic | 35.0% | |
| CCACTTACAAATGACTTAAC+CGG | - | chr8.1:79871091-79871110 | MS.gene052689:intron | 35.0% | |
| CGGTTAAGTCATTTGTAAGT+GGG | + | chr8.1:79871093-79871112 | None:intergenic | 35.0% | |
| CTGTATAAAATACTGCAAGG+AGG | - | chr8.1:79868219-79868238 | MS.gene052689:intron | 35.0% | |
| GAAGTATGAAGCAAATTCTG+AGG | + | chr8.1:79870273-79870292 | None:intergenic | 35.0% | |
| GATTCTTATTCTCTCTGCAA+GGG | + | chr8.1:79869769-79869788 | None:intergenic | 35.0% | |
| GCTAGTATGAATACTCATCT+TGG | - | chr8.1:79869809-79869828 | MS.gene052689:intron | 35.0% | |
| GGAAAAGATGGTAGGAATAT+TGG | - | chr8.1:79870989-79871008 | MS.gene052689:intron | 35.0% | |
| GGCTAACAAAACTATCATCA+AGG | + | chr8.1:79869245-79869264 | None:intergenic | 35.0% | |
| GGTTAAGTCATTTGTAAGTG+GGG | + | chr8.1:79871092-79871111 | None:intergenic | 35.0% | |
| GTAATCACCATAATCAGACT+TGG | - | chr8.1:79867834-79867853 | MS.gene052689:CDS | 35.0% | |
| GTCCTTGAAAACCATAGTTT+AGG | - | chr8.1:79870430-79870449 | MS.gene052689:CDS | 35.0% | |
| GTTTGTAAGTATGGCATCAA+TGG | + | chr8.1:79869284-79869303 | None:intergenic | 35.0% | |
| TCTGCATTTAAACGATGAGA+GGG | - | chr8.1:79871565-79871584 | MS.gene052689:CDS | 35.0% | |
| TGATAGGGAATATATCGATG+GGG | + | chr8.1:79868919-79868938 | None:intergenic | 35.0% | |
| TGTTTCTTCCAGATGATACT+CGG | + | chr8.1:79871499-79871518 | None:intergenic | 35.0% | |
| TTGGAAATAAGTTCCGTCTT+GGG | - | chr8.1:79867320-79867339 | MS.gene052689:CDS | 35.0% | |
| TTTAATAGAGCAAAGCCGTA+GGG | - | chr8.1:79869916-79869935 | MS.gene052689:intron | 35.0% | |
| ! | AACTAATTTTGAGCTTTGCG+CGG | - | chr8.1:79869108-79869127 | MS.gene052689:CDS | 35.0% |
| ! | GATTAGGTGATGTTGATTAC+CGG | - | chr8.1:79867904-79867923 | MS.gene052689:intron | 35.0% |
| ! | TACCAATTTTTCTCCCAAGA+CGG | + | chr8.1:79867336-79867355 | None:intergenic | 35.0% |
| !! | ACCATAGTTTAGGTTCTAGA+TGG | - | chr8.1:79870440-79870459 | MS.gene052689:CDS | 35.0% |
| !! | ATCCTTGTGATGGATTTACT+TGG | - | chr8.1:79868402-79868421 | MS.gene052689:intron | 35.0% |
| !! | CCATAGTTTAGGTTCTAGAT+GGG | - | chr8.1:79870441-79870460 | MS.gene052689:CDS | 35.0% |
| !! | GATGCCATAAAAGTACCTAT+AGG | + | chr8.1:79868843-79868862 | None:intergenic | 35.0% |
| !! | GTCATAGTTTAGGTTCTAGA+TGG | - | chr8.1:79870490-79870509 | MS.gene052689:CDS | 35.0% |
| !! | TAGGTGTACATCATTGACTT+TGG | - | chr8.1:79868776-79868795 | MS.gene052689:CDS | 35.0% |
| !!! | AAAATTGGTAGCGGATCTTT+TGG | - | chr8.1:79867346-79867365 | MS.gene052689:CDS | 35.0% |
| AAACCCATGAGGAAATTGTC+TGG | + | chr8.1:79868642-79868661 | None:intergenic | 40.0% | |
| AAAGCCAGACAATTTCCTCA+TGG | - | chr8.1:79868635-79868654 | MS.gene052689:CDS | 40.0% | |
| AACCGGATCTAAAGATGCTA+TGG | - | chr8.1:79871108-79871127 | MS.gene052689:intron | 40.0% | |
| AAGATGGTAGGAATATTGGG+TGG | - | chr8.1:79870993-79871012 | MS.gene052689:intron | 40.0% | |
| AAGCCAGACAATTTCCTCAT+GGG | - | chr8.1:79868636-79868655 | MS.gene052689:intron | 40.0% | |
| ACCATCACTTACAATACCAC+GGG | + | chr8.1:79870636-79870655 | None:intergenic | 40.0% | |
| ACTGGTGTAACAATCATGCA+AGG | + | chr8.1:79869207-79869226 | None:intergenic | 40.0% | |
| AGAGTACAACATCCTTGTGA+TGG | - | chr8.1:79868392-79868411 | MS.gene052689:intron | 40.0% | |
| AGGCAAATAGCTTAACGAAC+TGG | + | chr8.1:79869225-79869244 | None:intergenic | 40.0% | |
| AGTGACAATGTGACACTTAC+AGG | - | chr8.1:79870717-79870736 | MS.gene052689:intron | 40.0% | |
| ATACCGAATGTGAAATGGTC+CGG | - | chr8.1:79868360-79868379 | MS.gene052689:intron | 40.0% | |
| ATCATTAGCAATAGGTCCAG+AGG | + | chr8.1:79871047-79871066 | None:intergenic | 40.0% | |
| CACATCAGCATATTCCCTAT+AGG | - | chr8.1:79868825-79868844 | MS.gene052689:intron | 40.0% | |
| CACCATAGCATCTTTAGATC+CGG | + | chr8.1:79871113-79871132 | None:intergenic | 40.0% | |
| CACCATCACTTACAATACCA+CGG | + | chr8.1:79870637-79870656 | None:intergenic | 40.0% | |
| CCGGTTAAGTCATTTGTAAG+TGG | + | chr8.1:79871094-79871113 | None:intergenic | 40.0% | |
| CGGAACTTATTTCCAATTCG+AGG | + | chr8.1:79867316-79867335 | None:intergenic | 40.0% | |
| CTATTCATCCGTGAAGGTTT+GGG | - | chr8.1:79870362-79870381 | MS.gene052689:intron | 40.0% | |
| CTGGAATACCGAATGTGAAA+TGG | - | chr8.1:79868355-79868374 | MS.gene052689:intron | 40.0% | |
| CTTGCAGAAGTCAAAGATGA+TGG | - | chr8.1:79871180-79871199 | MS.gene052689:intron | 40.0% | |
| CTTGGGAGAAAAATTGGTAG+CGG | - | chr8.1:79867337-79867356 | MS.gene052689:CDS | 40.0% | |
| CTTTAATAGAGCAAAGCCGT+AGG | - | chr8.1:79869915-79869934 | MS.gene052689:intron | 40.0% | |
| GACAATTTCCTCATGGGTTT+AGG | - | chr8.1:79868642-79868661 | MS.gene052689:intron | 40.0% | |
| GGATGAGTCAGATGACAAAA+AGG | + | chr8.1:79870909-79870928 | None:intergenic | 40.0% | |
| GTCCCGATGTAAAAATGACT+TGG | + | chr8.1:79868613-79868632 | None:intergenic | 40.0% | |
| GTCTGCATTTAAACGATGAG+AGG | - | chr8.1:79871564-79871583 | MS.gene052689:CDS | 40.0% | |
| GTGACAATGTGACACTTACA+GGG | - | chr8.1:79870718-79870737 | MS.gene052689:intron | 40.0% | |
| TATGTTGCTGTAAGTGGTCA+AGG | - | chr8.1:79869698-79869717 | MS.gene052689:intron | 40.0% | |
| TCGAATTTCTTTCGGTCAAG+TGG | - | chr8.1:79871314-79871333 | MS.gene052689:intron | 40.0% | |
| TCTGGACCTATTGCTAATGA+TGG | - | chr8.1:79871046-79871065 | MS.gene052689:intron | 40.0% | |
| TCTTATGCTTGCCGATCAAA+TGG | - | chr8.1:79868482-79868501 | MS.gene052689:intron | 40.0% | |
| TTCCGTCTTGGGAGAAAAAT+TGG | - | chr8.1:79867331-79867350 | MS.gene052689:CDS | 40.0% | |
| TTGATCGGCAAGCATAAGAA+CGG | + | chr8.1:79868481-79868500 | None:intergenic | 40.0% | |
| ! | ACTAATTTTGAGCTTTGCGC+GGG | - | chr8.1:79869109-79869128 | MS.gene052689:CDS | 40.0% |
| ! | CCCATCTAGAACCTAAACTA+TGG | + | chr8.1:79870444-79870463 | None:intergenic | 40.0% |
| ! | GATGATTGATCAGGTTAGTC+AGG | - | chr8.1:79867812-79867831 | MS.gene052689:CDS | 40.0% |
| ! | TATGAGCACCAGAGCTTTTA+CGG | + | chr8.1:79871445-79871464 | None:intergenic | 40.0% |
| !! | ATACAACAATTGAGGGTGCT+TGG | + | chr8.1:79868190-79868209 | None:intergenic | 40.0% |
| !! | GAAGTATCGATTACAGACGT+AGG | - | chr8.1:79867783-79867802 | MS.gene052689:CDS | 40.0% |
| !! | GGTTTCTTTTCTTTGGAAGC+TGG | - | chr8.1:79868336-79868355 | MS.gene052689:intron | 40.0% |
| AAACAAGGCCCAAACCTTCA+CGG | + | chr8.1:79870373-79870392 | None:intergenic | 45.0% | |
| AAACTTGAATCCAGCGTGAG+AGG | + | chr8.1:79871413-79871432 | None:intergenic | 45.0% | |
| AATGCCAGGAATGCAAAACC+AGG | + | chr8.1:79869142-79869161 | None:intergenic | 45.0% | |
| ACACCGGACCATTTCACATT+CGG | + | chr8.1:79868366-79868385 | None:intergenic | 45.0% | |
| ACCTCAGTGACCGACAATAA+TGG | + | chr8.1:79870295-79870314 | None:intergenic | 45.0% | |
| AGGGAAACCCACCATTTGAT+CGG | + | chr8.1:79868496-79868515 | None:intergenic | 45.0% | |
| ATATTACACACCCCAGAGAG+AGG | + | chr8.1:79869624-79869643 | None:intergenic | 45.0% | |
| ATGCTTGCCGATCAAATGGT+GGG | - | chr8.1:79868486-79868505 | MS.gene052689:intron | 45.0% | |
| ATTTCCTCATGGGTTTAGGG+AGG | - | chr8.1:79868646-79868665 | MS.gene052689:intron | 45.0% | |
| CCAAACCTTCACGGATGAAT+AGG | + | chr8.1:79870364-79870383 | None:intergenic | 45.0% | |
| CCTATTCATCCGTGAAGGTT+TGG | - | chr8.1:79870361-79870380 | MS.gene052689:intron | 45.0% | |
| CTAGCTTCTGCAAATGCTGA+TGG | - | chr8.1:79870772-79870791 | MS.gene052689:intron | 45.0% | |
| GCGACTCTAAATCATCCCTA+CGG | + | chr8.1:79869934-79869953 | None:intergenic | 45.0% | |
| GGCCAAGTAAATCCATCACA+AGG | + | chr8.1:79868407-79868426 | None:intergenic | 45.0% | |
| TATGCTTGCCGATCAAATGG+TGG | - | chr8.1:79868485-79868504 | MS.gene052689:intron | 45.0% | |
| TATTACACACCCCAGAGAGA+GGG | + | chr8.1:79869623-79869642 | None:intergenic | 45.0% | |
| TCACTTACAATACCACGGGA+AGG | + | chr8.1:79870632-79870651 | None:intergenic | 45.0% | |
| TCAGCATTTGCAGAAGCTAG+CGG | + | chr8.1:79870772-79870791 | None:intergenic | 45.0% | |
| TCCATTATTGTCGGTCACTG+AGG | - | chr8.1:79870291-79870310 | MS.gene052689:CDS | 45.0% | |
| TCCCGTGGTATTGTAAGTGA+TGG | - | chr8.1:79870632-79870651 | MS.gene052689:intron | 45.0% | |
| TGCTGTCTCATTACGTTAGC+TGG | - | chr8.1:79870657-79870676 | MS.gene052689:intron | 45.0% | |
| TTAATGTGGTGCCTCTGTGT+AGG | - | chr8.1:79870962-79870981 | MS.gene052689:intron | 45.0% | |
| ! | AGGGATGATTTAGAGTCGCT+TGG | - | chr8.1:79869935-79869954 | MS.gene052689:intron | 45.0% |
| ! | CAAATTCTGAGGGATAGCCA+CGG | + | chr8.1:79870262-79870281 | None:intergenic | 45.0% |
| ! | CTAATTTTGAGCTTTGCGCG+GGG | - | chr8.1:79869110-79869129 | MS.gene052689:CDS | 45.0% |
| ! | CTCACGCTGGATTCAAGTTT+AGG | - | chr8.1:79871413-79871432 | MS.gene052689:CDS | 45.0% |
| ! | GGTATTTCTGCAGTCTACCT+TGG | - | chr8.1:79870056-79870075 | MS.gene052689:intron | 45.0% |
| ! | GGTGATGTTGATTACCGGTT+TGG | - | chr8.1:79867909-79867928 | MS.gene052689:intron | 45.0% |
| !! | TAGGTGGTGGAAAAGATGGT+AGG | - | chr8.1:79870981-79871000 | MS.gene052689:intron | 45.0% |
| !! | TGTGTAGGTGGTGGAAAAGA+TGG | - | chr8.1:79870977-79870996 | MS.gene052689:intron | 45.0% |
| !! | TTTACTTGGCCCTAGTCTTG+AGG | - | chr8.1:79868416-79868435 | MS.gene052689:intron | 45.0% |
| !!! | CTTTCCTGGTTTTGCATTCC+TGG | - | chr8.1:79869135-79869154 | MS.gene052689:intron | 45.0% |
| !!! | TATAATTTTTTTAGATAATT+TGG | - | chr8.1:79869359-79869378 | MS.gene052689:intron | 5.0% |
| ACTGGAATCCTGGAGCAACA+AGG | + | chr8.1:79870550-79870569 | None:intergenic | 50.0% | |
| CGTGACCTATTCATCCGTGA+AGG | - | chr8.1:79870356-79870375 | MS.gene052689:intron | 50.0% | |
| CTTACAATACCACGGGAAGG+AGG | + | chr8.1:79870629-79870648 | None:intergenic | 50.0% | |
| GAATGTGAAATGGTCCGGTG+TGG | - | chr8.1:79868365-79868384 | MS.gene052689:intron | 50.0% | |
| GAGCACAACCGAGTATCATC+TGG | - | chr8.1:79871488-79871507 | MS.gene052689:intron | 50.0% | |
| GTTGTACTCTCCTTCCACAC+CGG | + | chr8.1:79868382-79868401 | None:intergenic | 50.0% | |
| TTCGGTCAAGTGGATCTGCA+AGG | - | chr8.1:79871324-79871343 | MS.gene052689:intron | 50.0% | |
| TTCTGCAGTCTACCTTGGCA+GGG | - | chr8.1:79870061-79870080 | MS.gene052689:CDS | 50.0% | |
| TTTCTGCAGTCTACCTTGGC+AGG | - | chr8.1:79870060-79870079 | MS.gene052689:CDS | 50.0% | |
| ! | CTTTTCCACCACCTACACAG+AGG | + | chr8.1:79870976-79870995 | None:intergenic | 50.0% |
| ! | GCAAATGCTGATGGACAGTC+AGG | - | chr8.1:79870781-79870800 | MS.gene052689:intron | 50.0% |
| ! | TGTTCTTGCCTTGTTGCTCC+AGG | - | chr8.1:79870539-79870558 | MS.gene052689:intron | 50.0% |
| AATACCACGGGAAGGAGGAG+TGG | + | chr8.1:79870624-79870643 | None:intergenic | 55.0% | |
| ATGTGGTGCCTCTGTGTAGG+TGG | - | chr8.1:79870965-79870984 | MS.gene052689:intron | 55.0% | |
| CACTGCCAACAGCTGCATCA+CGG | + | chr8.1:79871370-79871389 | None:intergenic | 55.0% | |
| CACTTACAGGGTCTTGCTGC+TGG | - | chr8.1:79870730-79870749 | MS.gene052689:intron | 55.0% | |
| CCAGAGGTTCTCCTTCGAGT+GGG | + | chr8.1:79871031-79871050 | None:intergenic | 55.0% | |
| CCTGCTTTCAATCCCTGCCA+AGG | + | chr8.1:79870076-79870095 | None:intergenic | 55.0% | |
| CCTTGGCAGGGATTGAAAGC+AGG | - | chr8.1:79870073-79870092 | MS.gene052689:CDS | 55.0% | |
| CTTCGTCTGATCCCACTCGA+AGG | - | chr8.1:79871017-79871036 | MS.gene052689:intron | 55.0% | |
| GGAGCAGTCCGTAAAAGCTC+TGG | - | chr8.1:79871434-79871453 | MS.gene052689:intron | 55.0% | |
| GTGAAATGGTCCGGTGTGGA+AGG | - | chr8.1:79868369-79868388 | MS.gene052689:intron | 55.0% | |
| TCAAGTGGATCTGCAAGGCG+AGG | - | chr8.1:79871329-79871348 | MS.gene052689:intron | 55.0% | |
| TCCAGAGGTTCTCCTTCGAG+TGG | + | chr8.1:79871032-79871051 | None:intergenic | 55.0% | |
| TGCAGCTGTTGGCAGTGAGA+CGG | - | chr8.1:79871373-79871392 | MS.gene052689:intron | 55.0% | |
| ! | CTTTGCTAGTCTCTCTGCCG+TGG | - | chr8.1:79870242-79870261 | MS.gene052689:CDS | 55.0% |
| AGCAGCCGTGATGCAGCTGT+TGG | - | chr8.1:79871362-79871381 | MS.gene052689:intron | 60.0% | |
| AGCGTGAGAGGACGAGAGGA+GGG | + | chr8.1:79871401-79871420 | None:intergenic | 60.0% | |
| ATCCAGCGTGAGAGGACGAG+AGG | + | chr8.1:79871405-79871424 | None:intergenic | 60.0% | |
| CACGCCTCCCTAAACCCATG+AGG | + | chr8.1:79868653-79868672 | None:intergenic | 60.0% | |
| CCAGAGAGAGGGAGAGAGTC+GGG | + | chr8.1:79869612-79869631 | None:intergenic | 60.0% | |
| CCCACTCGAAGGAGAACCTC+TGG | - | chr8.1:79871028-79871047 | MS.gene052689:intron | 60.0% | |
| CCCAGAGAGAGGGAGAGAGT+CGG | + | chr8.1:79869613-79869632 | None:intergenic | 60.0% | |
| CCGACTCTCTCCCTCTCTCT+GGG | - | chr8.1:79869610-79869629 | MS.gene052689:intron | 60.0% | |
| CGACTCTCTCCCTCTCTCTG+GGG | - | chr8.1:79869611-79869630 | MS.gene052689:intron | 60.0% | |
| CTTGCTGCTGGACCGAGTTC+TGG | - | chr8.1:79870742-79870761 | MS.gene052689:intron | 60.0% | |
| CTTTGCGCGGGGAACTTTCC+TGG | - | chr8.1:79869121-79869140 | MS.gene052689:intron | 60.0% | |
| GCTAGCGGCAGACCAGAACT+CGG | + | chr8.1:79870757-79870776 | None:intergenic | 60.0% | |
| TGGTGCCTCTGTGTAGGTGG+TGG | - | chr8.1:79870968-79870987 | MS.gene052689:intron | 60.0% | |
| ATCGCCACTCCTCCTTCCCG+TGG | - | chr8.1:79870617-79870636 | MS.gene052689:intron | 65.0% | |
| CAGCGTGAGAGGACGAGAGG+AGG | + | chr8.1:79871402-79871421 | None:intergenic | 65.0% | |
| CCCGACTCTCTCCCTCTCTC+TGG | - | chr8.1:79869609-79869628 | MS.gene052689:intron | 65.0% | |
| CTCCTCTCGTCCTCTCACGC+TGG | - | chr8.1:79871400-79871419 | MS.gene052689:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 79867307 | 79871598 | 79867307 | ID=MS.gene052689 |
| chr8.1 | mRNA | 79867307 | 79871598 | 79867307 | ID=MS.gene052689.t1;Parent=MS.gene052689 |
| chr8.1 | exon | 79871523 | 79871598 | 79871523 | ID=MS.gene052689.t1.exon1;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79871523 | 79871598 | 79871523 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79871396 | 79871436 | 79871396 | ID=MS.gene052689.t1.exon2;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79871396 | 79871436 | 79871396 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79870662 | 79870731 | 79870662 | ID=MS.gene052689.t1.exon3;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79870662 | 79870731 | 79870662 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79870402 | 79870550 | 79870402 | ID=MS.gene052689.t1.exon4;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79870402 | 79870550 | 79870402 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79870225 | 79870320 | 79870225 | ID=MS.gene052689.t1.exon5;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79870225 | 79870320 | 79870225 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79870059 | 79870126 | 79870059 | ID=MS.gene052689.t1.exon6;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79870059 | 79870126 | 79870059 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79869069 | 79869130 | 79869069 | ID=MS.gene052689.t1.exon7;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79869069 | 79869130 | 79869069 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79868918 | 79868981 | 79868918 | ID=MS.gene052689.t1.exon8;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79868918 | 79868981 | 79868918 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79868752 | 79868836 | 79868752 | ID=MS.gene052689.t1.exon9;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79868752 | 79868836 | 79868752 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79868528 | 79868654 | 79868528 | ID=MS.gene052689.t1.exon10;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79868528 | 79868654 | 79868528 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79868262 | 79868344 | 79868262 | ID=MS.gene052689.t1.exon11;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79868262 | 79868344 | 79868262 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79868103 | 79868166 | 79868103 | ID=MS.gene052689.t1.exon12;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79868103 | 79868166 | 79868103 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79867776 | 79867921 | 79867776 | ID=MS.gene052689.t1.exon13;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79867776 | 79867921 | 79867776 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| chr8.1 | exon | 79867307 | 79867600 | 79867307 | ID=MS.gene052689.t1.exon14;Parent=MS.gene052689.t1 |
| chr8.1 | CDS | 79867307 | 79867600 | 79867307 | ID=cds.MS.gene052689.t1;Parent=MS.gene052689.t1 |
| Gene Sequence |
| Protein sequence |
