Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37374.t1 | XP_003627159.1 | 99.6 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 2.40E-266 | 927.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37374.t1 | Q9CAI5 | 74.4 | 469 | 112 | 6 | 1 | 466 | 1 | 464 | 2.4e-190 | 666.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37374.t1 | G7LI85 | 99.6 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 1.7e-266 | 927.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052689 | MS.gene37374 | 0.970516 | 9.78E-132 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57575 | MS.gene37374 | PPI |
| MS.gene025139 | MS.gene37374 | PPI |
| MS.gene37374 | MS.gene24338 | PPI |
| MS.gene051853 | MS.gene37374 | PPI |
| MS.gene062739 | MS.gene37374 | PPI |
| MS.gene27364 | MS.gene37374 | PPI |
| MS.gene012266 | MS.gene37374 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37374.t1 | MTR_8g018310 | 99.578 | 474 | 2 | 0 | 1 | 474 | 1 | 474 | 0.0 | 973 |
| MS.gene37374.t1 | MTR_2g099670 | 83.438 | 477 | 74 | 5 | 1 | 474 | 1 | 475 | 0.0 | 809 |
| MS.gene37374.t1 | MTR_8g018310 | 99.735 | 378 | 1 | 0 | 1 | 378 | 1 | 378 | 0.0 | 787 |
| MS.gene37374.t1 | MTR_4g126010 | 75.314 | 478 | 90 | 7 | 1 | 474 | 1 | 454 | 0.0 | 690 |
| MS.gene37374.t1 | MTR_2g099670 | 81.250 | 416 | 73 | 5 | 62 | 474 | 10 | 423 | 0.0 | 684 |
| MS.gene37374.t1 | MTR_2g039930 | 68.723 | 470 | 142 | 4 | 1 | 469 | 1 | 466 | 0.0 | 653 |
| MS.gene37374.t1 | MTR_1g069720 | 60.000 | 475 | 155 | 8 | 1 | 465 | 1 | 450 | 0.0 | 547 |
| MS.gene37374.t1 | MTR_7g097160 | 77.538 | 325 | 64 | 3 | 1 | 318 | 1 | 323 | 0.0 | 540 |
| MS.gene37374.t1 | MTR_1g042280 | 79.180 | 317 | 63 | 2 | 1 | 314 | 2 | 318 | 0.0 | 540 |
| MS.gene37374.t1 | MTR_1g075870 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 519 |
| MS.gene37374.t1 | MTR_1g075870 | 79.798 | 297 | 59 | 1 | 1 | 296 | 2 | 298 | 0.0 | 516 |
| MS.gene37374.t1 | MTR_2g039930 | 66.324 | 389 | 126 | 4 | 82 | 469 | 1 | 385 | 0.0 | 513 |
| MS.gene37374.t1 | MTR_6g087070 | 77.926 | 299 | 65 | 1 | 1 | 298 | 1 | 299 | 1.32e-178 | 507 |
| MS.gene37374.t1 | MTR_8g102930 | 76.589 | 299 | 69 | 1 | 1 | 298 | 1 | 299 | 1.79e-174 | 496 |
| MS.gene37374.t1 | MTR_1g042280 | 79.496 | 278 | 54 | 2 | 40 | 314 | 9 | 286 | 4.64e-168 | 476 |
| MS.gene37374.t1 | MTR_3g110180 | 65.964 | 332 | 106 | 3 | 1 | 326 | 1 | 331 | 4.34e-162 | 465 |
| MS.gene37374.t1 | MTR_0492s0030 | 71.000 | 300 | 84 | 2 | 1 | 297 | 1 | 300 | 8.01e-161 | 460 |
| MS.gene37374.t1 | MTR_0543s0020 | 71.000 | 300 | 84 | 2 | 1 | 297 | 1 | 300 | 8.01e-161 | 460 |
| MS.gene37374.t1 | MTR_3g110180 | 65.964 | 332 | 105 | 4 | 1 | 326 | 1 | 330 | 2.22e-160 | 461 |
| MS.gene37374.t1 | MTR_1g004990 | 66.144 | 319 | 107 | 1 | 1 | 318 | 1 | 319 | 4.60e-160 | 460 |
| MS.gene37374.t1 | MTR_1g075870 | 81.250 | 240 | 44 | 1 | 58 | 296 | 2 | 241 | 9.95e-151 | 431 |
| MS.gene37374.t1 | MTR_7g097160 | 78.571 | 182 | 30 | 3 | 144 | 318 | 25 | 204 | 2.95e-98 | 299 |
| MS.gene37374.t1 | MTR_7g006030 | 37.276 | 279 | 157 | 6 | 9 | 272 | 37 | 312 | 6.75e-57 | 199 |
| MS.gene37374.t1 | MTR_7g085540 | 38.408 | 289 | 159 | 7 | 4 | 276 | 140 | 425 | 1.03e-56 | 200 |
| MS.gene37374.t1 | MTR_1g007150 | 37.828 | 267 | 154 | 6 | 9 | 266 | 124 | 387 | 3.40e-56 | 198 |
| MS.gene37374.t1 | MTR_3g110240 | 38.951 | 267 | 151 | 6 | 9 | 266 | 121 | 384 | 3.76e-56 | 198 |
| MS.gene37374.t1 | MTR_1g116210 | 37.956 | 274 | 157 | 6 | 9 | 272 | 119 | 389 | 1.14e-55 | 197 |
| MS.gene37374.t1 | MTR_8g014050 | 36.957 | 276 | 151 | 8 | 9 | 266 | 128 | 398 | 1.59e-50 | 182 |
| MS.gene37374.t1 | MTR_7g116400 | 58.462 | 65 | 26 | 1 | 82 | 145 | 3 | 67 | 2.02e-18 | 80.5 |
| MS.gene37374.t1 | MTR_5g022030 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.41e-13 | 73.2 |
| MS.gene37374.t1 | MTR_5g022030 | 27.074 | 229 | 151 | 8 | 2 | 222 | 92 | 312 | 1.72e-13 | 73.2 |
| MS.gene37374.t1 | MTR_5g007590 | 44.595 | 74 | 33 | 1 | 72 | 145 | 54 | 119 | 1.45e-12 | 65.1 |
| MS.gene37374.t1 | MTR_4g128820 | 31.447 | 159 | 98 | 5 | 1 | 153 | 2 | 155 | 7.22e-12 | 67.8 |
| MS.gene37374.t1 | MTR_3g466400 | 27.197 | 239 | 120 | 11 | 1 | 213 | 5 | 215 | 1.39e-11 | 66.6 |
| MS.gene37374.t1 | MTR_3g086120 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 7.60e-11 | 65.1 |
| MS.gene37374.t1 | MTR_3g086120 | 27.619 | 210 | 132 | 10 | 11 | 211 | 610 | 808 | 7.99e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37374.t1 | AT1G72710 | 76.170 | 470 | 104 | 6 | 1 | 467 | 1 | 465 | 0.0 | 709 |
| MS.gene37374.t1 | AT4G26100 | 69.979 | 473 | 112 | 9 | 1 | 470 | 1 | 446 | 0.0 | 652 |
| MS.gene37374.t1 | AT5G57015 | 69.538 | 476 | 101 | 9 | 1 | 474 | 1 | 434 | 0.0 | 644 |
| MS.gene37374.t1 | AT2G19470 | 69.533 | 407 | 102 | 5 | 1 | 404 | 1 | 388 | 0.0 | 573 |
| MS.gene37374.t1 | AT1G03930 | 60.970 | 474 | 173 | 6 | 1 | 467 | 1 | 469 | 0.0 | 542 |
| MS.gene37374.t1 | AT5G44100 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| MS.gene37374.t1 | AT5G44100 | 82.492 | 297 | 51 | 1 | 1 | 296 | 1 | 297 | 0.0 | 539 |
| MS.gene37374.t1 | AT3G23340 | 64.096 | 415 | 135 | 6 | 1 | 414 | 1 | 402 | 0.0 | 531 |
| MS.gene37374.t1 | AT4G28540 | 73.620 | 326 | 78 | 2 | 1 | 318 | 5 | 330 | 0.0 | 520 |
| MS.gene37374.t1 | AT4G14340 | 63.260 | 411 | 137 | 5 | 1 | 410 | 7 | 404 | 0.0 | 519 |
| MS.gene37374.t1 | AT5G43320 | 56.495 | 485 | 186 | 9 | 1 | 469 | 1 | 476 | 0.0 | 517 |
| MS.gene37374.t1 | AT4G14340 | 78.788 | 297 | 62 | 1 | 1 | 296 | 7 | 303 | 0.0 | 511 |
| MS.gene37374.t1 | AT1G04440 | 69.940 | 336 | 100 | 1 | 1 | 335 | 1 | 336 | 3.19e-179 | 510 |
| MS.gene37374.t1 | AT5G43320 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.79e-177 | 501 |
| MS.gene37374.t1 | AT5G43320 | 77.104 | 297 | 67 | 1 | 1 | 296 | 1 | 297 | 4.79e-177 | 501 |
| MS.gene37374.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene37374.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene37374.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene37374.t1 | AT4G28880 | 66.479 | 355 | 110 | 3 | 1 | 354 | 1 | 347 | 7.49e-176 | 499 |
| MS.gene37374.t1 | AT3G23340 | 63.291 | 395 | 131 | 6 | 21 | 414 | 7 | 388 | 7.09e-175 | 498 |
| MS.gene37374.t1 | AT4G28860 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 3.08e-172 | 489 |
| MS.gene37374.t1 | AT4G28860 | 69.113 | 327 | 99 | 2 | 1 | 326 | 1 | 326 | 1.37e-171 | 489 |
| MS.gene37374.t1 | AT4G08800 | 68.525 | 305 | 63 | 3 | 1 | 304 | 1 | 273 | 3.14e-153 | 437 |
| MS.gene37374.t1 | AT2G25760 | 39.146 | 281 | 153 | 6 | 4 | 266 | 100 | 380 | 4.25e-61 | 211 |
| MS.gene37374.t1 | AT2G25760 | 38.434 | 281 | 152 | 7 | 4 | 266 | 100 | 377 | 5.57e-58 | 203 |
| MS.gene37374.t1 | AT3G03940 | 38.408 | 289 | 159 | 7 | 4 | 276 | 133 | 418 | 4.33e-56 | 198 |
| MS.gene37374.t1 | AT5G18190 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 4.94e-56 | 198 |
| MS.gene37374.t1 | AT5G18190 | 38.062 | 289 | 160 | 7 | 4 | 276 | 123 | 408 | 4.94e-56 | 198 |
| MS.gene37374.t1 | AT3G13670 | 36.042 | 283 | 163 | 6 | 9 | 276 | 137 | 416 | 2.25e-54 | 194 |
| MS.gene37374.t1 | AT2G17890 | 25.893 | 224 | 150 | 8 | 7 | 222 | 106 | 321 | 7.85e-13 | 71.2 |
| MS.gene37374.t1 | AT3G50530 | 25.532 | 235 | 135 | 8 | 5 | 218 | 144 | 359 | 6.92e-12 | 68.2 |
| MS.gene37374.t1 | AT5G39440 | 29.245 | 212 | 128 | 10 | 9 | 212 | 19 | 216 | 2.68e-11 | 66.2 |
| MS.gene37374.t1 | AT3G06030 | 26.941 | 219 | 134 | 7 | 8 | 212 | 67 | 273 | 6.58e-11 | 65.1 |
| MS.gene37374.t1 | AT3G29160 | 29.577 | 213 | 127 | 11 | 9 | 212 | 20 | 218 | 6.80e-11 | 64.3 |
| MS.gene37374.t1 | AT4G36070 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.45e-11 | 64.3 |
| MS.gene37374.t1 | AT4G36070 | 25.455 | 220 | 148 | 7 | 7 | 218 | 69 | 280 | 9.56e-11 | 64.3 |
Find 114 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATCAAACATAAATAATT+TGG | 0.143188 | 8.4:+74545350 | MS.gene37374:CDS |
| GACAATTTCCTCATGGGTTT+AGG | 0.228856 | 8.4:+74542475 | MS.gene37374:CDS |
| ATTTATTCAATTTCTGTAAT+AGG | 0.238085 | 8.4:+74542272 | MS.gene37374:CDS |
| TTCTTCATTTGTCTGAATAT+TGG | 0.261094 | 8.4:-74541309 | None:intergenic |
| GGAAAAGATGGTAGGAATAT+TGG | 0.271839 | 8.4:+74544822 | MS.gene37374:CDS |
| AAAATTGGTAGCGGATCTTT+TGG | 0.312915 | 8.4:+74541183 | MS.gene37374:CDS |
| CTCACGCTGGATTCAAGTTT+AGG | 0.327718 | 8.4:+74545246 | MS.gene37374:CDS |
| CTTGCTGCTGGACCGAGTTC+TGG | 0.338183 | 8.4:+74544575 | MS.gene37374:CDS |
| ACAATTTCCTCATGGGTTTA+GGG | 0.340991 | 8.4:+74542476 | MS.gene37374:CDS |
| GAAAAGATGGTAGGAATATT+GGG | 0.370564 | 8.4:+74544823 | MS.gene37374:CDS |
| ATGAATACTCATCTTGGAAT+TGG | 0.372690 | 8.4:+74543648 | MS.gene37374:CDS |
| ACCTCAGTGACCGACAATAA+TGG | 0.388781 | 8.4:-74544125 | None:intergenic |
| TTTCTGCAGTCTACCTTGGC+AGG | 0.394985 | 8.4:+74543893 | MS.gene37374:intron |
| TATCGAGTTCGAATTTCTTT+CGG | 0.396736 | 8.4:+74545139 | MS.gene37374:CDS |
| CACTTACAGGGTCTTGCTGC+TGG | 0.397023 | 8.4:+74544563 | MS.gene37374:intron |
| CTTCATACTTCCATTATTGT+CGG | 0.399001 | 8.4:+74544115 | MS.gene37374:CDS |
| AATCGAAGACATAATCAAAC+TGG | 0.405895 | 8.4:-74544398 | None:intergenic |
| CCAAACCTTCACGGATGAAT+AGG | 0.413827 | 8.4:-74544194 | None:intergenic |
| GGTTTAATGGAACCTCGAAT+TGG | 0.417126 | 8.4:+74541138 | None:intergenic |
| ATGCCATAAAAGTACCTATA+GGG | 0.418213 | 8.4:-74542672 | None:intergenic |
| AATTTGGATTCAACGCTTAG+AGG | 0.429713 | 8.4:+74545366 | MS.gene37374:CDS |
| GCTAGTATGAATACTCATCT+TGG | 0.435171 | 8.4:+74543642 | MS.gene37374:CDS |
| AAGATTCCATCATTAGCAAT+AGG | 0.437123 | 8.4:-74544885 | None:intergenic |
| TTGGAAATAAGTTCCGTCTT+GGG | 0.443286 | 8.4:+74541157 | MS.gene37374:CDS |
| ACACCGGACCATTTCACATT+CGG | 0.447768 | 8.4:-74542196 | None:intergenic |
| CACCATAGCATCTTTAGATC+CGG | 0.452993 | 8.4:-74544943 | None:intergenic |
| ATACAACAATTGAGGGTGCT+TGG | 0.454552 | 8.4:-74542020 | None:intergenic |
| TCTTATGCTTGCCGATCAAA+TGG | 0.457248 | 8.4:+74542315 | MS.gene37374:CDS |
| AGTTTGATTATGTCTTCGAT+TGG | 0.461696 | 8.4:+74544400 | MS.gene37374:CDS |
| TTTGCTTCATACAACAATTG+AGG | 0.464158 | 8.4:-74542028 | None:intergenic |
| TCTGGACCTATTGCTAATGA+TGG | 0.466720 | 8.4:+74544879 | MS.gene37374:CDS |
| TTGCTTCATACAACAATTGA+GGG | 0.471529 | 8.4:-74542027 | None:intergenic |
| ATCCTTGTGATGGATTTACT+TGG | 0.473724 | 8.4:+74542235 | MS.gene37374:CDS |
| CCACTTACAAATGACTTAAC+CGG | 0.474625 | 8.4:+74544924 | MS.gene37374:CDS |
| GAAAGTTTCTACATCTATTG+AGG | 0.478508 | 8.4:+74543965 | MS.gene37374:CDS |
| CTGGAATACCGAATGTGAAA+TGG | 0.479886 | 8.4:+74542188 | MS.gene37374:CDS |
| GCAAATGCTGATGGACAGTC+AGG | 0.482487 | 8.4:+74544614 | MS.gene37374:CDS |
| CCCACTCGAAGGAGAACCTC+TGG | 0.486536 | 8.4:+74544861 | MS.gene37374:CDS |
| CCGGTTAAGTCATTTGTAAG+TGG | 0.488016 | 8.4:-74544924 | None:intergenic |
| ATTGGAAATAAGTTCCGTCT+TGG | 0.488327 | 8.4:+74541156 | MS.gene37374:CDS |
| GAGCACAACCGAGTATCATC+TGG | 0.489104 | 8.4:+74545321 | MS.gene37374:CDS |
| CGGTTAAGTCATTTGTAAGT+GGG | 0.492030 | 8.4:-74544923 | None:intergenic |
| CTAGCTTCTGCAAATGCTGA+TGG | 0.497772 | 8.4:+74544605 | MS.gene37374:CDS |
| AGGGATGATTTAGAGTCGCT+TGG | 0.498396 | 8.4:+74543768 | MS.gene37374:CDS |
| GGTATTTCTGCAGTCTACCT+TGG | 0.499822 | 8.4:+74543889 | MS.gene37374:intron |
| TCGAATTTCTTTCGGTCAAG+TGG | 0.500221 | 8.4:+74545147 | MS.gene37374:CDS |
| CACATCAGCATATTCCCTAT+AGG | 0.500725 | 8.4:+74542658 | MS.gene37374:CDS |
| TTTACTTGGCCCTAGTCTTG+AGG | 0.502228 | 8.4:+74542249 | MS.gene37374:CDS |
| CGGAACTTATTTCCAATTCG+AGG | 0.504125 | 8.4:-74541150 | None:intergenic |
| TGTTTCTTCCAGATGATACT+CGG | 0.516048 | 8.4:-74545329 | None:intergenic |
| AAGCCAGACAATTTCCTCAT+GGG | 0.517628 | 8.4:+74542469 | MS.gene37374:CDS |
| TAGGTGTACATCATTGACTT+TGG | 0.518918 | 8.4:+74542609 | MS.gene37374:intron |
| TTGAATAAATCCTCAAGACT+AGG | 0.522442 | 8.4:-74542259 | None:intergenic |
| CTCCTCTCGTCCTCTCACGC+TGG | 0.525433 | 8.4:+74545233 | MS.gene37374:CDS |
| AAACCCATGAGGAAATTGTC+TGG | 0.531680 | 8.4:-74542472 | None:intergenic |
| GGAGCAGTCCGTAAAAGCTC+TGG | 0.533818 | 8.4:+74545267 | MS.gene37374:CDS |
| AACCGGATCTAAAGATGCTA+TGG | 0.540198 | 8.4:+74544941 | MS.gene37374:CDS |
| AAAGCCAGACAATTTCCTCA+TGG | 0.544831 | 8.4:+74542468 | MS.gene37374:CDS |
| TGAATAAATCCTCAAGACTA+GGG | 0.545896 | 8.4:-74542258 | None:intergenic |
| TTCTGCAGTCTACCTTGGCA+GGG | 0.547539 | 8.4:+74543894 | MS.gene37374:intron |
| AAACAAGGCCCAAACCTTCA+CGG | 0.553845 | 8.4:-74544203 | None:intergenic |
| CAGCGTGAGAGGACGAGAGG+AGG | 0.553851 | 8.4:-74545232 | None:intergenic |
| CGTGACCTATTCATCCGTGA+AGG | 0.553976 | 8.4:+74544189 | MS.gene37374:CDS |
| CAGAGAGAATAAGAATCTGA+CGG | 0.555069 | 8.4:+74543605 | MS.gene37374:intron |
| AGCGTGAGAGGACGAGAGGA+GGG | 0.556937 | 8.4:-74545231 | None:intergenic |
| GAAGTATGAAGCAAATTCTG+AGG | 0.560679 | 8.4:-74544103 | None:intergenic |
| TGTGTAGGTGGTGGAAAAGA+TGG | 0.562910 | 8.4:+74544810 | MS.gene37374:intron |
| GTGAAATGGTCCGGTGTGGA+AGG | 0.568781 | 8.4:+74542202 | MS.gene37374:CDS |
| AAACTTGAATCCAGCGTGAG+AGG | 0.575553 | 8.4:-74545243 | None:intergenic |
| TCCAGAGGTTCTCCTTCGAG+TGG | 0.576149 | 8.4:-74544862 | None:intergenic |
| AAGTTCACATATCATGTCAT+CGG | 0.576819 | 8.4:+74545299 | MS.gene37374:CDS |
| AGAGTACAACATCCTTGTGA+TGG | 0.579202 | 8.4:+74542225 | MS.gene37374:CDS |
| AGCAGCCGTGATGCAGCTGT+TGG | 0.579930 | 8.4:+74545195 | MS.gene37374:CDS |
| ATCATTAGCAATAGGTCCAG+AGG | 0.580010 | 8.4:-74544877 | None:intergenic |
| AGGGAAACCCACCATTTGAT+CGG | 0.583445 | 8.4:-74542326 | None:intergenic |
| CCTTGGCAGGGATTGAAAGC+AGG | 0.584404 | 8.4:+74543906 | MS.gene37374:CDS |
| AGAGAGAATAAGAATCTGAC+GGG | 0.585309 | 8.4:+74543606 | MS.gene37374:intron |
| CTTTGCTAGTCTCTCTGCCG+TGG | 0.586144 | 8.4:+74544075 | MS.gene37374:intron |
| CTTTAATAGAGCAAAGCCGT+AGG | 0.589565 | 8.4:+74543748 | MS.gene37374:intron |
| TTGATCGGCAAGCATAAGAA+CGG | 0.592423 | 8.4:-74542311 | None:intergenic |
| ATACCGAATGTGAAATGGTC+CGG | 0.593452 | 8.4:+74542193 | MS.gene37374:CDS |
| ACCATCACTTACAATACCAC+GGG | 0.602147 | 8.4:-74544466 | None:intergenic |
| TTTAATAGAGCAAAGCCGTA+GGG | 0.604857 | 8.4:+74543749 | MS.gene37374:intron |
| CACCATCACTTACAATACCA+CGG | 0.605886 | 8.4:-74544467 | None:intergenic |
| GGTTAAGTCATTTGTAAGTG+GGG | 0.606360 | 8.4:-74544922 | None:intergenic |
| GTCTGCATTTAAACGATGAG+AGG | 0.609688 | 8.4:+74545397 | MS.gene37374:CDS |
| CTTCGTCTGATCCCACTCGA+AGG | 0.610986 | 8.4:+74544850 | MS.gene37374:CDS |
| AAGCTGTATAAAATACTGCA+AGG | 0.612393 | 8.4:+74542049 | MS.gene37374:CDS |
| ATCGCCACTCCTCCTTCCCG+TGG | 0.613928 | 8.4:+74544450 | MS.gene37374:CDS |
| CCTGCTTTCAATCCCTGCCA+AGG | 0.616580 | 8.4:-74543906 | None:intergenic |
| CCAGAGGTTCTCCTTCGAGT+GGG | 0.619887 | 8.4:-74544861 | None:intergenic |
| ATCCAGCGTGAGAGGACGAG+AGG | 0.620493 | 8.4:-74545235 | None:intergenic |
| TCCATTATTGTCGGTCACTG+AGG | 0.621842 | 8.4:+74544124 | MS.gene37374:CDS |
| TTCGGTCAAGTGGATCTGCA+AGG | 0.626728 | 8.4:+74545157 | MS.gene37374:CDS |
| TGCAGCTGTTGGCAGTGAGA+CGG | 0.627439 | 8.4:+74545206 | MS.gene37374:CDS |
| ATTTCCTCATGGGTTTAGGG+AGG | 0.628140 | 8.4:+74542479 | MS.gene37374:CDS |
| CTTACAATACCACGGGAAGG+AGG | 0.631667 | 8.4:-74544459 | None:intergenic |
| AATACCACGGGAAGGAGGAG+TGG | 0.634617 | 8.4:-74544454 | None:intergenic |
| TCTGCATTTAAACGATGAGA+GGG | 0.635819 | 8.4:+74545398 | MS.gene37374:CDS |
| AAGTATGAAGCAAATTCTGA+GGG | 0.637275 | 8.4:-74544102 | None:intergenic |
| GCGACTCTAAATCATCCCTA+CGG | 0.637624 | 8.4:-74543764 | None:intergenic |
| TCAAGTGGATCTGCAAGGCG+AGG | 0.638769 | 8.4:+74545162 | MS.gene37374:CDS |
| TCAGCATTTGCAGAAGCTAG+CGG | 0.639218 | 8.4:-74544602 | None:intergenic |
| TAGGTGGTGGAAAAGATGGT+AGG | 0.644820 | 8.4:+74544814 | MS.gene37374:intron |
| GCTAGCGGCAGACCAGAACT+CGG | 0.647842 | 8.4:-74544587 | None:intergenic |
| GTTGTACTCTCCTTCCACAC+CGG | 0.649985 | 8.4:-74542212 | None:intergenic |
| CACTGCCAACAGCTGCATCA+CGG | 0.650486 | 8.4:-74545200 | None:intergenic |
| GGCCAAGTAAATCCATCACA+AGG | 0.666479 | 8.4:-74542237 | None:intergenic |
| TCACTTACAATACCACGGGA+AGG | 0.675431 | 8.4:-74544462 | None:intergenic |
| CAAATTCTGAGGGATAGCCA+CGG | 0.686783 | 8.4:-74544092 | None:intergenic |
| GAATGTGAAATGGTCCGGTG+TGG | 0.716403 | 8.4:+74542198 | MS.gene37374:CDS |
| CACGCCTCCCTAAACCCATG+AGG | 0.721724 | 8.4:-74542483 | None:intergenic |
| AAGATGGTAGGAATATTGGG+TGG | 0.729848 | 8.4:+74544826 | MS.gene37374:CDS |
| CTGTATAAAATACTGCAAGG+AGG | 0.737729 | 8.4:+74542052 | MS.gene37374:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCCAAAAATAAAATATAAAT+AGG | - | chr8.4:74544230-74544249 | None:intergenic | 10.0% |
| !!! | TCCTATTTATATTTTATTTT+TGG | + | chr8.4:74544226-74544245 | MS.gene37374:intron | 10.0% |
| !!! | TTAAGTTATTTAATTTTTAG+TGG | + | chr8.4:74544526-74544545 | MS.gene37374:intron | 10.0% |
| !!! | TTTTTATTCTTTTGAATTTT+TGG | + | chr8.4:74541392-74541411 | MS.gene37374:intron | 10.0% |
| !! | AAAAACTAATTGATACTTAA+TGG | - | chr8.4:74543290-74543309 | None:intergenic | 15.0% |
| !! | AAAATATAAATAGGAAAACA+AGG | - | chr8.4:74544221-74544240 | None:intergenic | 15.0% |
| !! | AAATAAAGTAATGATTGATT+AGG | + | chr8.4:74541721-74541740 | MS.gene37374:intron | 15.0% |
| !! | ATTTATTCAATTTCTGTAAT+AGG | + | chr8.4:74542272-74542291 | MS.gene37374:CDS | 15.0% |
| !! | GATTACCAAAATAATATTAA+AGG | - | chr8.4:74543169-74543188 | None:intergenic | 15.0% |
| !! | GTGAATAAAAAGTTATTAAA+AGG | + | chr8.4:74543384-74543403 | MS.gene37374:intron | 15.0% |
| !! | TAAATTTACAAACTGATATT+TGG | + | chr8.4:74541801-74541820 | MS.gene37374:intron | 15.0% |
| !!! | AATGATTTTAAAAGACATAA+TGG | - | chr8.4:74544037-74544056 | None:intergenic | 15.0% |
| !!! | TCATTTTCTTTTTCAAAATT+CGG | - | chr8.4:74541358-74541377 | None:intergenic | 15.0% |
| !!! | TGAATCCTTTAATATTATTT+TGG | + | chr8.4:74543161-74543180 | MS.gene37374:intron | 15.0% |
| !!! | TTTTGTAAAATCTATTATCA+TGG | + | chr8.4:74542782-74542801 | MS.gene37374:intron | 15.0% |
| !! | AAACAAAGAGTTGTATATAT+GGG | + | chr8.4:74541524-74541543 | MS.gene37374:intron | 20.0% |
| !! | AATAAATAATCGTAAAGACT+AGG | - | chr8.4:74543487-74543506 | None:intergenic | 20.0% |
| !! | AGTTATTATGTTTGTAAGTA+TGG | - | chr8.4:74543126-74543145 | None:intergenic | 20.0% |
| !! | CACATCAAACATAAATAATT+TGG | + | chr8.4:74545350-74545369 | MS.gene37374:CDS | 20.0% |
| !! | GAATTTATGCCAATTAAATT+TGG | + | chr8.4:74543408-74543427 | MS.gene37374:intron | 20.0% |
| !! | TAACAAATGAAAATCATTCA+AGG | - | chr8.4:74544763-74544782 | None:intergenic | 20.0% |
| !! | TGTCAAATGCTAAATAATAA+AGG | - | chr8.4:74543839-74543858 | None:intergenic | 20.0% |
| !! | TTGATTGTATACCTATTATA+TGG | - | chr8.4:74543222-74543241 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTTTGTTTGATTC+AGG | + | chr8.4:74541985-74542004 | MS.gene37374:intron | 20.0% |
| !!! | CATTTGACATATCTTTTAAT+TGG | + | chr8.4:74543850-74543869 | MS.gene37374:intron | 20.0% |
| !!! | CATTTTCTTTTTCAAAATTC+GGG | - | chr8.4:74541357-74541376 | None:intergenic | 20.0% |
| !!! | GTTCTTATGTATTTTTTAAG+AGG | + | chr8.4:74543795-74543814 | MS.gene37374:CDS | 20.0% |
| !!! | TCAATAACAACAAAAGTATT+CGG | - | chr8.4:74541430-74541449 | None:intergenic | 20.0% |
| !!! | TTAAAATCATTGTTGATTGT+GGG | + | chr8.4:74544046-74544065 | MS.gene37374:intron | 20.0% |
| !!! | TTATGTATTTTTTAAGAGGA+AGG | + | chr8.4:74543799-74543818 | MS.gene37374:CDS | 20.0% |
| !!! | TTTAAAATCATTGTTGATTG+TGG | + | chr8.4:74544045-74544064 | MS.gene37374:intron | 20.0% |
| !!! | TTTTGTTGTTGTGAATTTTA+GGG | + | chr8.4:74541258-74541277 | MS.gene37374:intron | 20.0% |
| !!! | TTTTTGTTGTTGTGAATTTT+AGG | + | chr8.4:74541257-74541276 | MS.gene37374:intron | 20.0% |
| !!! | TTTTTTCTTTGTCATAGTTT+AGG | + | chr8.4:74544313-74544332 | MS.gene37374:intron | 20.0% |
| ! | AAAGAGAAGTTAAAACAACA+AGG | - | chr8.4:74544643-74544662 | None:intergenic | 25.0% |
| ! | AAATCAATGGCTATTAAGAA+AGG | - | chr8.4:74543704-74543723 | None:intergenic | 25.0% |
| ! | AATACACAAATTCACTAAGT+TGG | - | chr8.4:74542088-74542107 | None:intergenic | 25.0% |
| ! | AATCAATGGCTATTAAGAAA+GGG | - | chr8.4:74543703-74543722 | None:intergenic | 25.0% |
| ! | AATTTGGACATCCATATAAT+AGG | + | chr8.4:74543208-74543227 | MS.gene37374:intron | 25.0% |
| ! | ATACACAAATTCACTAAGTT+GGG | - | chr8.4:74542087-74542106 | None:intergenic | 25.0% |
| ! | ATCACAAAAATGCAAGAAAT+TGG | - | chr8.4:74541236-74541255 | None:intergenic | 25.0% |
| ! | ATTGGATACTCTTTCTTATT+TGG | + | chr8.4:74543868-74543887 | MS.gene37374:intron | 25.0% |
| ! | CCAATGAAACCAAATTTAAT+TGG | - | chr8.4:74543420-74543439 | None:intergenic | 25.0% |
| ! | GAAACAAAGAGTTGTATATA+TGG | + | chr8.4:74541523-74541542 | MS.gene37374:intron | 25.0% |
| ! | TATAACTTCAAATACCAAAC+CGG | - | chr8.4:74541759-74541778 | None:intergenic | 25.0% |
| ! | TATGGGATATTGAATTTCAT+TGG | + | chr8.4:74541541-74541560 | MS.gene37374:intron | 25.0% |
| ! | TCAGTTAAGTTAATGATTAC+TGG | + | chr8.4:74541694-74541713 | MS.gene37374:intron | 25.0% |
| ! | TCCAACATCATATATGATTA+AGG | + | chr8.4:74545088-74545107 | MS.gene37374:intron | 25.0% |
| ! | TCCTTAATCATATATGATGT+TGG | - | chr8.4:74545092-74545111 | None:intergenic | 25.0% |
| ! | TTATTGAAGTTTGATGAGAA+GGG | + | chr8.4:74541443-74541462 | MS.gene37374:intron | 25.0% |
| ! | TTCTTCATTTGTCTGAATAT+TGG | - | chr8.4:74541312-74541331 | None:intergenic | 25.0% |
| ! | TTGAGACATTATAAGAAAAC+TGG | - | chr8.4:74542381-74542400 | None:intergenic | 25.0% |
| !! | ACAAAATAAGAAAGCATGAT+AGG | - | chr8.4:74542768-74542787 | None:intergenic | 25.0% |
| !! | CAAAATAAGAAAGCATGATA+GGG | - | chr8.4:74542767-74542786 | None:intergenic | 25.0% |
| !! | CCAATTAAATTTGGTTTCAT+TGG | + | chr8.4:74543417-74543436 | MS.gene37374:intron | 25.0% |
| !! | CTTAGTGAATTTGTGTATTT+TGG | + | chr8.4:74542089-74542108 | MS.gene37374:intron | 25.0% |
| !! | TTTTCTGATTTTATTCAGCA+TGG | + | chr8.4:74542701-74542720 | MS.gene37374:intron | 25.0% |
| !!! | ATACCAAGTCATTTTTACAT+CGG | + | chr8.4:74542440-74542459 | MS.gene37374:CDS | 25.0% |
| !!! | CATTTTCAGGTAAAAATCAA+TGG | - | chr8.4:74543717-74543736 | None:intergenic | 25.0% |
| !!! | TGGCTTAAATGTTTTTTGTT+GGG | + | chr8.4:74542148-74542167 | MS.gene37374:intron | 25.0% |
| !!! | TTAATTTGTGTTTTTGTTGC+AGG | + | chr8.4:74541284-74541303 | MS.gene37374:intron | 25.0% |
| !!! | TTGGCTTAAATGTTTTTTGT+TGG | + | chr8.4:74542147-74542166 | MS.gene37374:intron | 25.0% |
| AAGAAAATAGAATCAATGCC+AGG | - | chr8.4:74542989-74543008 | None:intergenic | 30.0% | |
| AAGATTCCATCATTAGCAAT+AGG | - | chr8.4:74544888-74544907 | None:intergenic | 30.0% | |
| AAGCTGTATAAAATACTGCA+AGG | + | chr8.4:74542049-74542068 | MS.gene37374:CDS | 30.0% | |
| AAGTATGAAGCAAATTCTGA+GGG | - | chr8.4:74544105-74544124 | None:intergenic | 30.0% | |
| AAGTTCACATATCATGTCAT+CGG | + | chr8.4:74545299-74545318 | MS.gene37374:CDS | 30.0% | |
| AATCGAAGACATAATCAAAC+TGG | - | chr8.4:74544401-74544420 | None:intergenic | 30.0% | |
| AATGGATCTTAGTTCAAACA+AGG | - | chr8.4:74543099-74543118 | None:intergenic | 30.0% | |
| AGGTAATTAGATGATTGATC+AGG | + | chr8.4:74541636-74541655 | MS.gene37374:intron | 30.0% | |
| AGTTTGATTATGTCTTCGAT+TGG | + | chr8.4:74544400-74544419 | MS.gene37374:CDS | 30.0% | |
| ATAACTTATGTTGCTGTAAG+TGG | + | chr8.4:74543525-74543544 | MS.gene37374:intron | 30.0% | |
| ATCATGGAAAATCCTATATC+TGG | + | chr8.4:74542798-74542817 | MS.gene37374:intron | 30.0% | |
| ATGAATACTCATCTTGGAAT+TGG | + | chr8.4:74543648-74543667 | MS.gene37374:CDS | 30.0% | |
| ATGATAGGGAATATATCGAT+GGG | - | chr8.4:74542753-74542772 | None:intergenic | 30.0% | |
| ATTACAAGCTTATGCAATAC+AGG | - | chr8.4:74542349-74542368 | None:intergenic | 30.0% | |
| CTTCATACTTCCATTATTGT+CGG | + | chr8.4:74544115-74544134 | MS.gene37374:CDS | 30.0% | |
| GAAAAGATGGTAGGAATATT+GGG | + | chr8.4:74544823-74544842 | MS.gene37374:CDS | 30.0% | |
| GAAAGTTTCTACATCTATTG+AGG | + | chr8.4:74543965-74543984 | MS.gene37374:CDS | 30.0% | |
| GATTACTACTATTTAGTAGG+AGG | + | chr8.4:74542864-74542883 | MS.gene37374:intron | 30.0% | |
| GCTGATTACTACTATTTAGT+AGG | + | chr8.4:74542861-74542880 | MS.gene37374:intron | 30.0% | |
| GTTATTGAAGTTTGATGAGA+AGG | + | chr8.4:74541442-74541461 | MS.gene37374:intron | 30.0% | |
| TAATCGATACTTCGATTACA+AGG | - | chr8.4:74541609-74541628 | None:intergenic | 30.0% | |
| TACATCTATTGAGGTATGAT+TGG | + | chr8.4:74543974-74543993 | MS.gene37374:intron | 30.0% | |
| TAGACTTCATATTACTCACT+TGG | + | chr8.4:74542128-74542147 | MS.gene37374:intron | 30.0% | |
| TATTGAAGTTTGATGAGAAG+GGG | + | chr8.4:74541444-74541463 | MS.gene37374:intron | 30.0% | |
| TGAATAAATCCTCAAGACTA+GGG | - | chr8.4:74542261-74542280 | None:intergenic | 30.0% | |
| TGATTAACCAAGTCTGATTA+TGG | - | chr8.4:74541677-74541696 | None:intergenic | 30.0% | |
| TTACAAGCTTATGCAATACA+GGG | - | chr8.4:74542348-74542367 | None:intergenic | 30.0% | |
| TTCATATTTGCCTCTTATGT+AGG | + | chr8.4:74542590-74542609 | MS.gene37374:intron | 30.0% | |
| TTGAATAAATCCTCAAGACT+AGG | - | chr8.4:74542262-74542281 | None:intergenic | 30.0% | |
| TTGCTTCATACAACAATTGA+GGG | - | chr8.4:74542030-74542049 | None:intergenic | 30.0% | |
| TTTGCTTCATACAACAATTG+AGG | - | chr8.4:74542031-74542050 | None:intergenic | 30.0% | |
| ! | AAAATCCTATATCTGGAATC+TGG | + | chr8.4:74542805-74542824 | MS.gene37374:intron | 30.0% |
| ! | AACCTAAACTATGGTTTTCA+AGG | - | chr8.4:74544268-74544287 | None:intergenic | 30.0% |
| ! | AGCAAAAAACTCACATTTTC+AGG | - | chr8.4:74543730-74543749 | None:intergenic | 30.0% |
| ! | ATGGTGCGTGTTTTATATAT+GGG | + | chr8.4:74544960-74544979 | MS.gene37374:intron | 30.0% |
| ! | ATTCCCTATAGGTACTTTTA+TGG | + | chr8.4:74542669-74542688 | MS.gene37374:intron | 30.0% |
| ! | CTTTTCAGATAAGCATAATC+TGG | - | chr8.4:74544162-74544181 | None:intergenic | 30.0% |
| ! | TATGGTGCGTGTTTTATATA+TGG | + | chr8.4:74544959-74544978 | MS.gene37374:intron | 30.0% |
| ! | TTTGTTGGGTTTCTTTTCTT+TGG | + | chr8.4:74542162-74542181 | MS.gene37374:intron | 30.0% |
| !! | ATGCCATAAAAGTACCTATA+GGG | - | chr8.4:74542675-74542694 | None:intergenic | 30.0% |
| !! | TCATAGTTTAGGTTCTAGAT+GGG | + | chr8.4:74544324-74544343 | MS.gene37374:intron | 30.0% |
| !! | TCTTTTGGAGAGATCTATTT+AGG | + | chr8.4:74541198-74541217 | MS.gene37374:CDS | 30.0% |
| !!! | TACCAAGTCATTTTTACATC+GGG | + | chr8.4:74542441-74542460 | MS.gene37374:CDS | 30.0% |
| !!! | TACCAGTGCATTTTTTAATG+TGG | + | chr8.4:74544781-74544800 | MS.gene37374:intron | 30.0% |
| AACATCCAGATTCCAGATAT+AGG | - | chr8.4:74542813-74542832 | None:intergenic | 35.0% | |
| AACTGATACATAACAAGCGT+TGG | - | chr8.4:74542571-74542590 | None:intergenic | 35.0% | |
| AATTTGGATTCAACGCTTAG+AGG | + | chr8.4:74545366-74545385 | MS.gene37374:CDS | 35.0% | |
| ACAATTTCCTCATGGGTTTA+GGG | + | chr8.4:74542476-74542495 | MS.gene37374:CDS | 35.0% | |
| ACATAATCAAACTGGAATCC+TGG | - | chr8.4:74544393-74544412 | None:intergenic | 35.0% | |
| AGAGAGAATAAGAATCTGAC+GGG | + | chr8.4:74543606-74543625 | MS.gene37374:intron | 35.0% | |
| AGATTCTTATTCTCTCTGCA+AGG | - | chr8.4:74543603-74543622 | None:intergenic | 35.0% | |
| ATGATGTACACCTACATAAG+AGG | - | chr8.4:74542603-74542622 | None:intergenic | 35.0% | |
| ATTGGAAATAAGTTCCGTCT+TGG | + | chr8.4:74541156-74541175 | MS.gene37374:CDS | 35.0% | |
| CACCACATTAAAAAATGCAC+TGG | - | chr8.4:74544786-74544805 | None:intergenic | 35.0% | |
| CAGAGAGAATAAGAATCTGA+CGG | + | chr8.4:74543605-74543624 | MS.gene37374:intron | 35.0% | |
| CATGATAGGGAATATATCGA+TGG | - | chr8.4:74542754-74542773 | None:intergenic | 35.0% | |
| CCACTTACAAATGACTTAAC+CGG | + | chr8.4:74544924-74544943 | MS.gene37374:CDS | 35.0% | |
| CGGTTAAGTCATTTGTAAGT+GGG | - | chr8.4:74544926-74544945 | None:intergenic | 35.0% | |
| CTGTATAAAATACTGCAAGG+AGG | + | chr8.4:74542052-74542071 | MS.gene37374:CDS | 35.0% | |
| GAAGTATGAAGCAAATTCTG+AGG | - | chr8.4:74544106-74544125 | None:intergenic | 35.0% | |
| GATTCTTATTCTCTCTGCAA+GGG | - | chr8.4:74543602-74543621 | None:intergenic | 35.0% | |
| GCTAGTATGAATACTCATCT+TGG | + | chr8.4:74543642-74543661 | MS.gene37374:CDS | 35.0% | |
| GGAAAAGATGGTAGGAATAT+TGG | + | chr8.4:74544822-74544841 | MS.gene37374:CDS | 35.0% | |
| GGCTAACAAAACTATCATCA+AGG | - | chr8.4:74543078-74543097 | None:intergenic | 35.0% | |
| GGTTAAGTCATTTGTAAGTG+GGG | - | chr8.4:74544925-74544944 | None:intergenic | 35.0% | |
| GTAATCACCATAATCAGACT+TGG | + | chr8.4:74541667-74541686 | MS.gene37374:intron | 35.0% | |
| GTCCTTGAAAACCATAGTTT+AGG | + | chr8.4:74544263-74544282 | MS.gene37374:intron | 35.0% | |
| GTTTGTAAGTATGGCATCAA+TGG | - | chr8.4:74543117-74543136 | None:intergenic | 35.0% | |
| TCTGCATTTAAACGATGAGA+GGG | + | chr8.4:74545398-74545417 | MS.gene37374:CDS | 35.0% | |
| TGATAGGGAATATATCGATG+GGG | - | chr8.4:74542752-74542771 | None:intergenic | 35.0% | |
| TGTTTCTTCCAGATGATACT+CGG | - | chr8.4:74545332-74545351 | None:intergenic | 35.0% | |
| TTGGAAATAAGTTCCGTCTT+GGG | + | chr8.4:74541157-74541176 | MS.gene37374:CDS | 35.0% | |
| TTTAATAGAGCAAAGCCGTA+GGG | + | chr8.4:74543749-74543768 | MS.gene37374:intron | 35.0% | |
| ! | AACTAATTTTGAGCTTTGCG+CGG | + | chr8.4:74542941-74542960 | MS.gene37374:intron | 35.0% |
| ! | GATTAGGTGATGTTGATTAC+CGG | + | chr8.4:74541737-74541756 | MS.gene37374:intron | 35.0% |
| ! | TACCAATTTTTCTCCCAAGA+CGG | - | chr8.4:74541173-74541192 | None:intergenic | 35.0% |
| !! | ACCATAGTTTAGGTTCTAGA+TGG | + | chr8.4:74544273-74544292 | MS.gene37374:intron | 35.0% |
| !! | ATCCTTGTGATGGATTTACT+TGG | + | chr8.4:74542235-74542254 | MS.gene37374:CDS | 35.0% |
| !! | CCATAGTTTAGGTTCTAGAT+GGG | + | chr8.4:74544274-74544293 | MS.gene37374:intron | 35.0% |
| !! | GATGCCATAAAAGTACCTAT+AGG | - | chr8.4:74542676-74542695 | None:intergenic | 35.0% |
| !! | GTCATAGTTTAGGTTCTAGA+TGG | + | chr8.4:74544323-74544342 | MS.gene37374:intron | 35.0% |
| !! | TAGGTGTACATCATTGACTT+TGG | + | chr8.4:74542609-74542628 | MS.gene37374:intron | 35.0% |
| !!! | AAAATTGGTAGCGGATCTTT+TGG | + | chr8.4:74541183-74541202 | MS.gene37374:CDS | 35.0% |
| AAACCCATGAGGAAATTGTC+TGG | - | chr8.4:74542475-74542494 | None:intergenic | 40.0% | |
| AAAGCCAGACAATTTCCTCA+TGG | + | chr8.4:74542468-74542487 | MS.gene37374:CDS | 40.0% | |
| AACCGGATCTAAAGATGCTA+TGG | + | chr8.4:74544941-74544960 | MS.gene37374:CDS | 40.0% | |
| AAGATGGTAGGAATATTGGG+TGG | + | chr8.4:74544826-74544845 | MS.gene37374:CDS | 40.0% | |
| AAGCCAGACAATTTCCTCAT+GGG | + | chr8.4:74542469-74542488 | MS.gene37374:CDS | 40.0% | |
| ACCATCACTTACAATACCAC+GGG | - | chr8.4:74544469-74544488 | None:intergenic | 40.0% | |
| ACTGGTGTAACAATCATGCA+AGG | - | chr8.4:74543040-74543059 | None:intergenic | 40.0% | |
| AGAGTACAACATCCTTGTGA+TGG | + | chr8.4:74542225-74542244 | MS.gene37374:CDS | 40.0% | |
| AGGCAAATAGCTTAACGAAC+TGG | - | chr8.4:74543058-74543077 | None:intergenic | 40.0% | |
| AGTGACAATGTGACACTTAC+AGG | + | chr8.4:74544550-74544569 | MS.gene37374:intron | 40.0% | |
| ATACCGAATGTGAAATGGTC+CGG | + | chr8.4:74542193-74542212 | MS.gene37374:CDS | 40.0% | |
| ATCATTAGCAATAGGTCCAG+AGG | - | chr8.4:74544880-74544899 | None:intergenic | 40.0% | |
| CACATCAGCATATTCCCTAT+AGG | + | chr8.4:74542658-74542677 | MS.gene37374:CDS | 40.0% | |
| CACCATAGCATCTTTAGATC+CGG | - | chr8.4:74544946-74544965 | None:intergenic | 40.0% | |
| CACCATCACTTACAATACCA+CGG | - | chr8.4:74544470-74544489 | None:intergenic | 40.0% | |
| CCGGTTAAGTCATTTGTAAG+TGG | - | chr8.4:74544927-74544946 | None:intergenic | 40.0% | |
| CGGAACTTATTTCCAATTCG+AGG | - | chr8.4:74541153-74541172 | None:intergenic | 40.0% | |
| CTATTCATCCGTGAAGGTTT+GGG | + | chr8.4:74544195-74544214 | MS.gene37374:intron | 40.0% | |
| CTGGAATACCGAATGTGAAA+TGG | + | chr8.4:74542188-74542207 | MS.gene37374:CDS | 40.0% | |
| CTTGCAGAAGTCAAAGATGA+TGG | + | chr8.4:74545013-74545032 | MS.gene37374:intron | 40.0% | |
| CTTGGGAGAAAAATTGGTAG+CGG | + | chr8.4:74541174-74541193 | MS.gene37374:CDS | 40.0% | |
| CTTTAATAGAGCAAAGCCGT+AGG | + | chr8.4:74543748-74543767 | MS.gene37374:intron | 40.0% | |
| GACAATTTCCTCATGGGTTT+AGG | + | chr8.4:74542475-74542494 | MS.gene37374:CDS | 40.0% | |
| GGATGAGTCAGATGACAAAA+AGG | - | chr8.4:74544742-74544761 | None:intergenic | 40.0% | |
| GTCCCGATGTAAAAATGACT+TGG | - | chr8.4:74542446-74542465 | None:intergenic | 40.0% | |
| GTCTGCATTTAAACGATGAG+AGG | + | chr8.4:74545397-74545416 | MS.gene37374:CDS | 40.0% | |
| GTGACAATGTGACACTTACA+GGG | + | chr8.4:74544551-74544570 | MS.gene37374:intron | 40.0% | |
| TATGTTGCTGTAAGTGGTCA+AGG | + | chr8.4:74543531-74543550 | MS.gene37374:intron | 40.0% | |
| TCGAATTTCTTTCGGTCAAG+TGG | + | chr8.4:74545147-74545166 | MS.gene37374:CDS | 40.0% | |
| TCTGGACCTATTGCTAATGA+TGG | + | chr8.4:74544879-74544898 | MS.gene37374:CDS | 40.0% | |
| TCTTATGCTTGCCGATCAAA+TGG | + | chr8.4:74542315-74542334 | MS.gene37374:CDS | 40.0% | |
| TTCCGTCTTGGGAGAAAAAT+TGG | + | chr8.4:74541168-74541187 | MS.gene37374:CDS | 40.0% | |
| TTGATCGGCAAGCATAAGAA+CGG | - | chr8.4:74542314-74542333 | None:intergenic | 40.0% | |
| ! | ACTAATTTTGAGCTTTGCGC+GGG | + | chr8.4:74542942-74542961 | MS.gene37374:intron | 40.0% |
| ! | CCCATCTAGAACCTAAACTA+TGG | - | chr8.4:74544277-74544296 | None:intergenic | 40.0% |
| ! | GATGATTGATCAGGTTAGTC+AGG | + | chr8.4:74541645-74541664 | MS.gene37374:intron | 40.0% |
| ! | TATGAGCACCAGAGCTTTTA+CGG | - | chr8.4:74545278-74545297 | None:intergenic | 40.0% |
| !! | ATACAACAATTGAGGGTGCT+TGG | - | chr8.4:74542023-74542042 | None:intergenic | 40.0% |
| !! | GAAGTATCGATTACAGACGT+AGG | + | chr8.4:74541616-74541635 | MS.gene37374:intron | 40.0% |
| !! | GGTTTCTTTTCTTTGGAAGC+TGG | + | chr8.4:74542169-74542188 | MS.gene37374:intron | 40.0% |
| AAACAAGGCCCAAACCTTCA+CGG | - | chr8.4:74544206-74544225 | None:intergenic | 45.0% | |
| AAACTTGAATCCAGCGTGAG+AGG | - | chr8.4:74545246-74545265 | None:intergenic | 45.0% | |
| AATGCCAGGAATGCAAAACC+AGG | - | chr8.4:74542975-74542994 | None:intergenic | 45.0% | |
| ACACCGGACCATTTCACATT+CGG | - | chr8.4:74542199-74542218 | None:intergenic | 45.0% | |
| ACCTCAGTGACCGACAATAA+TGG | - | chr8.4:74544128-74544147 | None:intergenic | 45.0% | |
| AGGGAAACCCACCATTTGAT+CGG | - | chr8.4:74542329-74542348 | None:intergenic | 45.0% | |
| ATATTACACACCCCAGAGAG+AGG | - | chr8.4:74543457-74543476 | None:intergenic | 45.0% | |
| ATGCTTGCCGATCAAATGGT+GGG | + | chr8.4:74542319-74542338 | MS.gene37374:intron | 45.0% | |
| ATTTCCTCATGGGTTTAGGG+AGG | + | chr8.4:74542479-74542498 | MS.gene37374:CDS | 45.0% | |
| CCAAACCTTCACGGATGAAT+AGG | - | chr8.4:74544197-74544216 | None:intergenic | 45.0% | |
| CCTATTCATCCGTGAAGGTT+TGG | + | chr8.4:74544194-74544213 | MS.gene37374:intron | 45.0% | |
| CTAGCTTCTGCAAATGCTGA+TGG | + | chr8.4:74544605-74544624 | MS.gene37374:CDS | 45.0% | |
| GCGACTCTAAATCATCCCTA+CGG | - | chr8.4:74543767-74543786 | None:intergenic | 45.0% | |
| GGCCAAGTAAATCCATCACA+AGG | - | chr8.4:74542240-74542259 | None:intergenic | 45.0% | |
| TATGCTTGCCGATCAAATGG+TGG | + | chr8.4:74542318-74542337 | MS.gene37374:intron | 45.0% | |
| TATTACACACCCCAGAGAGA+GGG | - | chr8.4:74543456-74543475 | None:intergenic | 45.0% | |
| TCACTTACAATACCACGGGA+AGG | - | chr8.4:74544465-74544484 | None:intergenic | 45.0% | |
| TCAGCATTTGCAGAAGCTAG+CGG | - | chr8.4:74544605-74544624 | None:intergenic | 45.0% | |
| TCCATTATTGTCGGTCACTG+AGG | + | chr8.4:74544124-74544143 | MS.gene37374:CDS | 45.0% | |
| TCCCGTGGTATTGTAAGTGA+TGG | + | chr8.4:74544465-74544484 | MS.gene37374:intron | 45.0% | |
| TGCTGTCTCATTACGTTAGC+TGG | + | chr8.4:74544490-74544509 | MS.gene37374:intron | 45.0% | |
| TTAATGTGGTGCCTCTGTGT+AGG | + | chr8.4:74544795-74544814 | MS.gene37374:intron | 45.0% | |
| ! | AGGGATGATTTAGAGTCGCT+TGG | + | chr8.4:74543768-74543787 | MS.gene37374:CDS | 45.0% |
| ! | CAAATTCTGAGGGATAGCCA+CGG | - | chr8.4:74544095-74544114 | None:intergenic | 45.0% |
| ! | CTAATTTTGAGCTTTGCGCG+GGG | + | chr8.4:74542943-74542962 | MS.gene37374:intron | 45.0% |
| ! | CTCACGCTGGATTCAAGTTT+AGG | + | chr8.4:74545246-74545265 | MS.gene37374:CDS | 45.0% |
| ! | GGTATTTCTGCAGTCTACCT+TGG | + | chr8.4:74543889-74543908 | MS.gene37374:intron | 45.0% |
| ! | GGTGATGTTGATTACCGGTT+TGG | + | chr8.4:74541742-74541761 | MS.gene37374:intron | 45.0% |
| !! | TAGGTGGTGGAAAAGATGGT+AGG | + | chr8.4:74544814-74544833 | MS.gene37374:intron | 45.0% |
| !! | TGTGTAGGTGGTGGAAAAGA+TGG | + | chr8.4:74544810-74544829 | MS.gene37374:intron | 45.0% |
| !! | TTTACTTGGCCCTAGTCTTG+AGG | + | chr8.4:74542249-74542268 | MS.gene37374:CDS | 45.0% |
| !!! | CTTTCCTGGTTTTGCATTCC+TGG | + | chr8.4:74542968-74542987 | MS.gene37374:intron | 45.0% |
| !!! | TATAATTTTTTTAGATAATT+TGG | + | chr8.4:74543192-74543211 | MS.gene37374:intron | 5.0% |
| ACTGGAATCCTGGAGCAACA+AGG | - | chr8.4:74544383-74544402 | None:intergenic | 50.0% | |
| CGTGACCTATTCATCCGTGA+AGG | + | chr8.4:74544189-74544208 | MS.gene37374:CDS | 50.0% | |
| CTTACAATACCACGGGAAGG+AGG | - | chr8.4:74544462-74544481 | None:intergenic | 50.0% | |
| GAATGTGAAATGGTCCGGTG+TGG | + | chr8.4:74542198-74542217 | MS.gene37374:CDS | 50.0% | |
| GAGCACAACCGAGTATCATC+TGG | + | chr8.4:74545321-74545340 | MS.gene37374:CDS | 50.0% | |
| GTTGTACTCTCCTTCCACAC+CGG | - | chr8.4:74542215-74542234 | None:intergenic | 50.0% | |
| TTCGGTCAAGTGGATCTGCA+AGG | + | chr8.4:74545157-74545176 | MS.gene37374:CDS | 50.0% | |
| TTCTGCAGTCTACCTTGGCA+GGG | + | chr8.4:74543894-74543913 | MS.gene37374:intron | 50.0% | |
| TTTCTGCAGTCTACCTTGGC+AGG | + | chr8.4:74543893-74543912 | MS.gene37374:intron | 50.0% | |
| ! | CTTTTCCACCACCTACACAG+AGG | - | chr8.4:74544809-74544828 | None:intergenic | 50.0% |
| ! | GCAAATGCTGATGGACAGTC+AGG | + | chr8.4:74544614-74544633 | MS.gene37374:CDS | 50.0% |
| ! | TGTTCTTGCCTTGTTGCTCC+AGG | + | chr8.4:74544372-74544391 | MS.gene37374:intron | 50.0% |
| AATACCACGGGAAGGAGGAG+TGG | - | chr8.4:74544457-74544476 | None:intergenic | 55.0% | |
| ATGTGGTGCCTCTGTGTAGG+TGG | + | chr8.4:74544798-74544817 | MS.gene37374:intron | 55.0% | |
| CACTGCCAACAGCTGCATCA+CGG | - | chr8.4:74545203-74545222 | None:intergenic | 55.0% | |
| CACTTACAGGGTCTTGCTGC+TGG | + | chr8.4:74544563-74544582 | MS.gene37374:intron | 55.0% | |
| CCAGAGGTTCTCCTTCGAGT+GGG | - | chr8.4:74544864-74544883 | None:intergenic | 55.0% | |
| CCTGCTTTCAATCCCTGCCA+AGG | - | chr8.4:74543909-74543928 | None:intergenic | 55.0% | |
| CCTTGGCAGGGATTGAAAGC+AGG | + | chr8.4:74543906-74543925 | MS.gene37374:CDS | 55.0% | |
| CTTCGTCTGATCCCACTCGA+AGG | + | chr8.4:74544850-74544869 | MS.gene37374:CDS | 55.0% | |
| GGAGCAGTCCGTAAAAGCTC+TGG | + | chr8.4:74545267-74545286 | MS.gene37374:CDS | 55.0% | |
| GTGAAATGGTCCGGTGTGGA+AGG | + | chr8.4:74542202-74542221 | MS.gene37374:CDS | 55.0% | |
| TCAAGTGGATCTGCAAGGCG+AGG | + | chr8.4:74545162-74545181 | MS.gene37374:CDS | 55.0% | |
| TCCAGAGGTTCTCCTTCGAG+TGG | - | chr8.4:74544865-74544884 | None:intergenic | 55.0% | |
| TGCAGCTGTTGGCAGTGAGA+CGG | + | chr8.4:74545206-74545225 | MS.gene37374:CDS | 55.0% | |
| ! | CTTTGCTAGTCTCTCTGCCG+TGG | + | chr8.4:74544075-74544094 | MS.gene37374:intron | 55.0% |
| AGCAGCCGTGATGCAGCTGT+TGG | + | chr8.4:74545195-74545214 | MS.gene37374:CDS | 60.0% | |
| AGCGTGAGAGGACGAGAGGA+GGG | - | chr8.4:74545234-74545253 | None:intergenic | 60.0% | |
| ATCCAGCGTGAGAGGACGAG+AGG | - | chr8.4:74545238-74545257 | None:intergenic | 60.0% | |
| CACGCCTCCCTAAACCCATG+AGG | - | chr8.4:74542486-74542505 | None:intergenic | 60.0% | |
| CCAGAGAGAGGGAGAGAGTC+GGG | - | chr8.4:74543445-74543464 | None:intergenic | 60.0% | |
| CCCACTCGAAGGAGAACCTC+TGG | + | chr8.4:74544861-74544880 | MS.gene37374:CDS | 60.0% | |
| CCCAGAGAGAGGGAGAGAGT+CGG | - | chr8.4:74543446-74543465 | None:intergenic | 60.0% | |
| CCGACTCTCTCCCTCTCTCT+GGG | + | chr8.4:74543443-74543462 | MS.gene37374:intron | 60.0% | |
| CGACTCTCTCCCTCTCTCTG+GGG | + | chr8.4:74543444-74543463 | MS.gene37374:intron | 60.0% | |
| CTTGCTGCTGGACCGAGTTC+TGG | + | chr8.4:74544575-74544594 | MS.gene37374:CDS | 60.0% | |
| CTTTGCGCGGGGAACTTTCC+TGG | + | chr8.4:74542954-74542973 | MS.gene37374:intron | 60.0% | |
| GCTAGCGGCAGACCAGAACT+CGG | - | chr8.4:74544590-74544609 | None:intergenic | 60.0% | |
| TGGTGCCTCTGTGTAGGTGG+TGG | + | chr8.4:74544801-74544820 | MS.gene37374:intron | 60.0% | |
| ATCGCCACTCCTCCTTCCCG+TGG | + | chr8.4:74544450-74544469 | MS.gene37374:CDS | 65.0% | |
| CAGCGTGAGAGGACGAGAGG+AGG | - | chr8.4:74545235-74545254 | None:intergenic | 65.0% | |
| CCCGACTCTCTCCCTCTCTC+TGG | + | chr8.4:74543442-74543461 | MS.gene37374:intron | 65.0% | |
| CTCCTCTCGTCCTCTCACGC+TGG | + | chr8.4:74545233-74545252 | MS.gene37374:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 74541144 | 74545431 | 74541144 | ID=MS.gene37374 |
| chr8.4 | mRNA | 74541144 | 74545431 | 74541144 | ID=MS.gene37374.t1;Parent=MS.gene37374 |
| chr8.4 | exon | 74541144 | 74541219 | 74541144 | ID=MS.gene37374.t1.exon1;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74541144 | 74541219 | 74541144 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74541306 | 74541346 | 74541306 | ID=MS.gene37374.t1.exon2;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74541306 | 74541346 | 74541306 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74542007 | 74542076 | 74542007 | ID=MS.gene37374.t1.exon3;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74542007 | 74542076 | 74542007 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74542188 | 74542336 | 74542188 | ID=MS.gene37374.t1.exon4;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74542188 | 74542336 | 74542188 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74542418 | 74542513 | 74542418 | ID=MS.gene37374.t1.exon5;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74542418 | 74542513 | 74542418 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74542612 | 74542679 | 74542612 | ID=MS.gene37374.t1.exon6;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74542612 | 74542679 | 74542612 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74543608 | 74543669 | 74543608 | ID=MS.gene37374.t1.exon7;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74543608 | 74543669 | 74543608 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74543757 | 74543820 | 74543757 | ID=MS.gene37374.t1.exon8;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74543757 | 74543820 | 74543757 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74543902 | 74543986 | 74543902 | ID=MS.gene37374.t1.exon9;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74543902 | 74543986 | 74543902 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74544084 | 74544210 | 74544084 | ID=MS.gene37374.t1.exon10;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74544084 | 74544210 | 74544084 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74544394 | 74544476 | 74544394 | ID=MS.gene37374.t1.exon11;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74544394 | 74544476 | 74544394 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74544572 | 74544635 | 74544572 | ID=MS.gene37374.t1.exon12;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74544572 | 74544635 | 74544572 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74544817 | 74544962 | 74544817 | ID=MS.gene37374.t1.exon13;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74544817 | 74544962 | 74544817 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| chr8.4 | exon | 74545138 | 74545431 | 74545138 | ID=MS.gene37374.t1.exon14;Parent=MS.gene37374.t1 |
| chr8.4 | CDS | 74545138 | 74545431 | 74545138 | ID=cds.MS.gene37374.t1;Parent=MS.gene37374.t1 |
| Gene Sequence |
| Protein sequence |
