Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053310.t1 | AFK46072.1 | 93.8 | 325 | 19 | 1 | 1 | 324 | 1 | 325 | 1.40E-169 | 605.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053310.t1 | Q9SAH9 | 45.6 | 320 | 162 | 5 | 9 | 322 | 4 | 317 | 8.4e-70 | 265.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053310.t1 | I3T0N0 | 93.8 | 325 | 19 | 1 | 1 | 324 | 1 | 325 | 1.0e-169 | 605.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053308 | MS.gene053310 | 0.862511 | 4.81E-64 | -1.69E-46 |
| MS.gene053310 | MS.gene25300 | 0.966493 | 5.40E-126 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65685 | MS.gene053310 | PPI |
| MS.gene96654 | MS.gene053310 | PPI |
| MS.gene63037 | MS.gene053310 | PPI |
| MS.gene053310 | MS.gene053809 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053310.t1 | MTR_4g009040 | 93.538 | 325 | 20 | 1 | 1 | 324 | 1 | 325 | 0.0 | 618 |
| MS.gene053310.t1 | MTR_4g009040 | 92.401 | 329 | 20 | 2 | 1 | 324 | 1 | 329 | 0.0 | 612 |
| MS.gene053310.t1 | MTR_4g009690 | 92.615 | 325 | 24 | 0 | 1 | 325 | 1 | 325 | 0.0 | 598 |
| MS.gene053310.t1 | MTR_4g009690 | 92.331 | 326 | 24 | 1 | 1 | 325 | 1 | 326 | 0.0 | 594 |
| MS.gene053310.t1 | MTR_4g006940 | 47.222 | 324 | 158 | 5 | 4 | 322 | 11 | 326 | 8.28e-89 | 269 |
| MS.gene053310.t1 | MTR_2g104960 | 47.302 | 315 | 156 | 4 | 13 | 322 | 20 | 329 | 3.42e-86 | 263 |
| MS.gene053310.t1 | MTR_5g072620 | 42.188 | 320 | 176 | 4 | 10 | 322 | 2 | 319 | 3.03e-82 | 252 |
| MS.gene053310.t1 | MTR_4g006940 | 50.181 | 277 | 129 | 4 | 4 | 279 | 11 | 279 | 1.30e-81 | 249 |
| MS.gene053310.t1 | MTR_4g006940 | 50.181 | 277 | 129 | 4 | 4 | 279 | 11 | 279 | 1.30e-81 | 249 |
| MS.gene053310.t1 | MTR_3g005170 | 43.770 | 313 | 167 | 6 | 13 | 318 | 10 | 320 | 4.69e-80 | 246 |
| MS.gene053310.t1 | MTR_3g005210 | 43.849 | 317 | 169 | 6 | 9 | 318 | 2 | 316 | 3.28e-79 | 244 |
| MS.gene053310.t1 | MTR_4g077100 | 42.722 | 316 | 170 | 7 | 11 | 318 | 9 | 321 | 3.49e-77 | 239 |
| MS.gene053310.t1 | MTR_2g101330 | 41.745 | 321 | 176 | 5 | 12 | 324 | 4 | 321 | 5.77e-77 | 239 |
| MS.gene053310.t1 | MTR_8g062440 | 44.062 | 320 | 167 | 8 | 11 | 322 | 6 | 321 | 2.08e-76 | 237 |
| MS.gene053310.t1 | MTR_4g077130 | 42.320 | 319 | 173 | 7 | 8 | 318 | 4 | 319 | 1.22e-75 | 235 |
| MS.gene053310.t1 | MTR_8g062440 | 44.237 | 321 | 166 | 9 | 11 | 322 | 6 | 322 | 1.35e-75 | 235 |
| MS.gene053310.t1 | MTR_8g062110 | 43.533 | 317 | 167 | 8 | 10 | 318 | 6 | 318 | 8.68e-74 | 230 |
| MS.gene053310.t1 | MTR_8g062110 | 43.533 | 317 | 167 | 8 | 10 | 318 | 15 | 327 | 1.20e-73 | 230 |
| MS.gene053310.t1 | MTR_3g005170 | 45.185 | 270 | 142 | 5 | 13 | 278 | 10 | 277 | 2.83e-73 | 228 |
| MS.gene053310.t1 | MTR_3g031650 | 38.994 | 318 | 189 | 3 | 10 | 322 | 2 | 319 | 5.01e-73 | 228 |
| MS.gene053310.t1 | MTR_2g028620 | 40.244 | 328 | 179 | 8 | 8 | 323 | 5 | 327 | 1.70e-71 | 225 |
| MS.gene053310.t1 | MTR_4g077100 | 44.118 | 272 | 146 | 5 | 11 | 278 | 9 | 278 | 3.61e-71 | 222 |
| MS.gene053310.t1 | MTR_8g062440 | 46.442 | 267 | 136 | 6 | 11 | 273 | 6 | 269 | 9.30e-69 | 218 |
| MS.gene053310.t1 | MTR_1g022440 | 38.272 | 324 | 186 | 10 | 10 | 322 | 5 | 325 | 7.05e-68 | 216 |
| MS.gene053310.t1 | MTR_3g005170 | 39.936 | 313 | 148 | 6 | 13 | 318 | 10 | 289 | 1.17e-67 | 214 |
| MS.gene053310.t1 | MTR_8g062110 | 42.857 | 287 | 150 | 7 | 10 | 292 | 6 | 282 | 8.38e-67 | 211 |
| MS.gene053310.t1 | MTR_8g062110 | 44.280 | 271 | 144 | 6 | 10 | 276 | 6 | 273 | 9.99e-67 | 211 |
| MS.gene053310.t1 | MTR_3g031650 | 39.552 | 268 | 160 | 2 | 10 | 275 | 2 | 269 | 4.43e-66 | 209 |
| MS.gene053310.t1 | MTR_2g028620 | 43.636 | 275 | 145 | 6 | 8 | 275 | 5 | 276 | 5.15e-66 | 210 |
| MS.gene053310.t1 | MTR_5g056600 | 36.250 | 320 | 192 | 6 | 12 | 322 | 3 | 319 | 1.20e-65 | 209 |
| MS.gene053310.t1 | MTR_1g022445 | 37.695 | 321 | 186 | 9 | 13 | 322 | 8 | 325 | 1.64e-65 | 209 |
| MS.gene053310.t1 | MTR_4g092080 | 38.369 | 331 | 179 | 10 | 11 | 321 | 12 | 337 | 2.18e-57 | 189 |
| MS.gene053310.t1 | MTR_7g074880 | 36.533 | 323 | 190 | 8 | 12 | 322 | 7 | 326 | 1.25e-53 | 179 |
| MS.gene053310.t1 | MTR_7g074730 | 36.196 | 326 | 189 | 10 | 12 | 322 | 7 | 328 | 5.38e-52 | 174 |
| MS.gene053310.t1 | MTR_7g074820 | 36.810 | 326 | 188 | 9 | 12 | 322 | 7 | 329 | 1.32e-51 | 173 |
| MS.gene053310.t1 | MTR_4g081440 | 33.811 | 349 | 201 | 11 | 1 | 324 | 8 | 351 | 3.26e-51 | 173 |
| MS.gene053310.t1 | MTR_4g081440 | 33.429 | 347 | 206 | 10 | 1 | 324 | 12 | 356 | 4.67e-50 | 170 |
| MS.gene053310.t1 | MTR_7g074850 | 34.049 | 326 | 197 | 9 | 12 | 322 | 7 | 329 | 2.69e-47 | 162 |
| MS.gene053310.t1 | MTR_4g023730 | 35.736 | 333 | 190 | 12 | 8 | 322 | 3 | 329 | 2.71e-45 | 157 |
| MS.gene053310.t1 | MTR_7g074710 | 33.951 | 324 | 197 | 11 | 12 | 322 | 7 | 326 | 1.70e-44 | 155 |
| MS.gene053310.t1 | MTR_8g062710 | 75.532 | 94 | 13 | 1 | 12 | 105 | 19 | 102 | 6.72e-41 | 139 |
| MS.gene053310.t1 | MTR_8g062110 | 38.222 | 225 | 129 | 6 | 101 | 318 | 11 | 232 | 6.70e-39 | 137 |
| MS.gene053310.t1 | MTR_7g074870 | 34.875 | 281 | 170 | 8 | 52 | 322 | 11 | 288 | 6.88e-37 | 134 |
| MS.gene053310.t1 | MTR_0164s0070 | 53.543 | 127 | 57 | 2 | 12 | 136 | 4 | 130 | 1.27e-36 | 131 |
| MS.gene053310.t1 | MTR_8g062708 | 85.294 | 68 | 10 | 0 | 213 | 280 | 1 | 68 | 4.78e-35 | 124 |
| MS.gene053310.t1 | MTR_5g029990 | 31.596 | 307 | 171 | 9 | 13 | 302 | 12 | 296 | 2.64e-34 | 127 |
| MS.gene053310.t1 | MTR_8g062110 | 37.989 | 179 | 106 | 4 | 101 | 276 | 11 | 187 | 3.08e-32 | 119 |
| MS.gene053310.t1 | MTR_6g406250 | 31.298 | 262 | 172 | 4 | 13 | 268 | 55 | 314 | 4.90e-31 | 120 |
| MS.gene053310.t1 | MTR_7g117190 | 29.358 | 327 | 200 | 12 | 12 | 311 | 6 | 328 | 4.39e-26 | 106 |
| MS.gene053310.t1 | MTR_2g013230 | 29.275 | 345 | 199 | 14 | 12 | 322 | 7 | 340 | 6.29e-26 | 105 |
| MS.gene053310.t1 | MTR_7g117190 | 30.690 | 290 | 171 | 11 | 12 | 275 | 6 | 291 | 1.07e-25 | 104 |
| MS.gene053310.t1 | MTR_6g406250 | 31.553 | 206 | 137 | 2 | 13 | 214 | 55 | 260 | 1.24e-25 | 103 |
| MS.gene053310.t1 | MTR_2g013250 | 28.280 | 343 | 201 | 12 | 12 | 320 | 6 | 337 | 4.60e-24 | 100 |
| MS.gene053310.t1 | MTR_0685s0030 | 33.962 | 159 | 98 | 2 | 165 | 318 | 2 | 158 | 2.14e-22 | 92.0 |
| MS.gene053310.t1 | MTR_2g013260 | 27.616 | 344 | 202 | 13 | 12 | 320 | 7 | 338 | 1.09e-20 | 91.7 |
| MS.gene053310.t1 | MTR_2g013260 | 35.359 | 181 | 98 | 7 | 12 | 179 | 7 | 181 | 2.60e-19 | 87.0 |
| MS.gene053310.t1 | MTR_0685s0030 | 33.333 | 114 | 76 | 0 | 165 | 278 | 2 | 115 | 1.03e-16 | 75.5 |
| MS.gene053310.t1 | MTR_3g011130 | 37.607 | 117 | 68 | 4 | 104 | 216 | 30 | 145 | 3.52e-15 | 72.0 |
| MS.gene053310.t1 | MTR_3g101500 | 30.233 | 258 | 143 | 12 | 11 | 256 | 2 | 234 | 5.92e-13 | 68.9 |
| MS.gene053310.t1 | MTR_3g101500 | 30.233 | 258 | 143 | 12 | 11 | 256 | 2 | 234 | 7.80e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053310.t1 | AT2G33590 | 61.342 | 313 | 119 | 1 | 12 | 322 | 8 | 320 | 2.30e-138 | 395 |
| MS.gene053310.t1 | AT2G33600 | 60.064 | 313 | 123 | 1 | 12 | 322 | 8 | 320 | 6.53e-129 | 371 |
| MS.gene053310.t1 | AT1G76470 | 54.717 | 318 | 138 | 3 | 11 | 322 | 5 | 322 | 8.56e-111 | 325 |
| MS.gene053310.t1 | AT1G09510 | 47.205 | 322 | 161 | 6 | 8 | 322 | 3 | 322 | 1.18e-86 | 263 |
| MS.gene053310.t1 | AT1G51410 | 46.106 | 321 | 162 | 7 | 11 | 323 | 7 | 324 | 2.09e-86 | 263 |
| MS.gene053310.t1 | AT1G80820 | 45.141 | 319 | 165 | 4 | 9 | 322 | 4 | 317 | 1.71e-84 | 258 |
| MS.gene053310.t1 | AT5G19440 | 44.848 | 330 | 170 | 7 | 1 | 323 | 1 | 325 | 3.88e-83 | 254 |
| MS.gene053310.t1 | AT1G15950 | 44.654 | 318 | 166 | 4 | 10 | 322 | 10 | 322 | 4.48e-80 | 247 |
| MS.gene053310.t1 | AT1G15950 | 44.654 | 318 | 166 | 4 | 10 | 322 | 10 | 322 | 4.48e-80 | 247 |
| MS.gene053310.t1 | AT1G09490 | 42.138 | 318 | 177 | 5 | 11 | 322 | 6 | 322 | 2.81e-78 | 242 |
| MS.gene053310.t1 | AT1G80820 | 48.529 | 272 | 134 | 3 | 9 | 279 | 4 | 270 | 2.29e-77 | 238 |
| MS.gene053310.t1 | AT1G09480 | 43.082 | 318 | 174 | 5 | 11 | 322 | 6 | 322 | 6.29e-77 | 238 |
| MS.gene053310.t1 | AT1G15950 | 44.481 | 308 | 161 | 4 | 10 | 312 | 10 | 312 | 1.34e-76 | 238 |
| MS.gene053310.t1 | AT5G58490 | 41.905 | 315 | 178 | 3 | 13 | 322 | 9 | 323 | 2.27e-76 | 237 |
| MS.gene053310.t1 | AT1G09480 | 43.082 | 318 | 174 | 5 | 11 | 322 | 53 | 369 | 2.45e-76 | 238 |
| MS.gene053310.t1 | AT1G15950 | 47.826 | 276 | 138 | 3 | 10 | 284 | 10 | 280 | 3.76e-76 | 235 |
| MS.gene053310.t1 | AT1G66800 | 44.828 | 319 | 163 | 7 | 11 | 322 | 6 | 318 | 4.44e-76 | 236 |
| MS.gene053310.t1 | AT1G15950 | 48.352 | 273 | 135 | 3 | 10 | 281 | 10 | 277 | 8.71e-76 | 234 |
| MS.gene053310.t1 | AT1G15950 | 48.339 | 271 | 134 | 3 | 10 | 279 | 10 | 275 | 6.70e-75 | 232 |
| MS.gene053310.t1 | AT4G35420 | 41.176 | 323 | 174 | 7 | 12 | 324 | 7 | 323 | 2.64e-74 | 232 |
| MS.gene053310.t1 | AT1G09500 | 41.796 | 323 | 180 | 5 | 8 | 322 | 3 | 325 | 4.03e-74 | 231 |
| MS.gene053310.t1 | AT2G02400 | 38.801 | 317 | 183 | 6 | 13 | 322 | 6 | 318 | 2.93e-73 | 229 |
| MS.gene053310.t1 | AT1G09500 | 44.815 | 270 | 146 | 3 | 8 | 274 | 3 | 272 | 3.80e-71 | 222 |
| MS.gene053310.t1 | AT5G42800 | 39.144 | 327 | 185 | 9 | 7 | 322 | 2 | 325 | 2.60e-66 | 213 |
| MS.gene053310.t1 | AT1G09490 | 39.643 | 280 | 163 | 4 | 48 | 322 | 13 | 291 | 2.42e-61 | 197 |
| MS.gene053310.t1 | AT1G09500 | 40.071 | 282 | 162 | 4 | 48 | 322 | 10 | 291 | 4.41e-57 | 186 |
| MS.gene053310.t1 | AT1G25460 | 34.603 | 315 | 198 | 5 | 15 | 322 | 6 | 319 | 1.09e-53 | 179 |
| MS.gene053310.t1 | AT1G68540 | 33.544 | 316 | 202 | 5 | 15 | 322 | 6 | 321 | 1.32e-52 | 176 |
| MS.gene053310.t1 | AT2G45400 | 36.254 | 331 | 184 | 10 | 13 | 322 | 40 | 364 | 3.47e-51 | 173 |
| MS.gene053310.t1 | AT1G61720 | 34.706 | 340 | 189 | 11 | 10 | 325 | 10 | 340 | 6.00e-48 | 164 |
| MS.gene053310.t1 | AT4G27250 | 33.435 | 329 | 196 | 9 | 1 | 311 | 1 | 324 | 1.90e-46 | 160 |
| MS.gene053310.t1 | AT2G45400 | 36.879 | 282 | 159 | 7 | 13 | 279 | 40 | 317 | 1.39e-45 | 157 |
| MS.gene053310.t1 | AT4G27250 | 33.432 | 338 | 194 | 10 | 1 | 311 | 1 | 334 | 1.62e-45 | 158 |
| MS.gene053310.t1 | AT1G15950 | 40.179 | 224 | 129 | 2 | 104 | 322 | 1 | 224 | 9.62e-43 | 148 |
| MS.gene053310.t1 | AT2G23910 | 30.909 | 275 | 173 | 6 | 14 | 281 | 11 | 275 | 2.27e-40 | 143 |
| MS.gene053310.t1 | AT2G23910 | 31.481 | 270 | 165 | 6 | 14 | 273 | 11 | 270 | 2.44e-40 | 142 |
| MS.gene053310.t1 | AT2G23910 | 31.481 | 270 | 165 | 6 | 14 | 273 | 11 | 270 | 3.99e-40 | 143 |
| MS.gene053310.t1 | AT2G45400 | 33.651 | 315 | 182 | 11 | 27 | 322 | 1 | 307 | 1.49e-39 | 141 |
| MS.gene053310.t1 | AT4G30470 | 33.333 | 270 | 159 | 7 | 14 | 273 | 11 | 269 | 1.29e-37 | 136 |
| MS.gene053310.t1 | AT2G45400 | 39.726 | 219 | 115 | 6 | 13 | 218 | 40 | 254 | 1.74e-35 | 129 |
| MS.gene053310.t1 | AT1G68540 | 31.884 | 207 | 136 | 3 | 121 | 322 | 8 | 214 | 2.90e-30 | 114 |
| MS.gene053310.t1 | AT2G23910 | 30.472 | 233 | 143 | 5 | 50 | 273 | 14 | 236 | 4.70e-30 | 115 |
| MS.gene053310.t1 | AT5G14700 | 32.601 | 273 | 166 | 8 | 9 | 268 | 51 | 318 | 1.34e-28 | 114 |
| MS.gene053310.t1 | AT5G14700 | 33.333 | 216 | 132 | 5 | 9 | 214 | 51 | 264 | 5.83e-24 | 99.8 |
| MS.gene053310.t1 | AT4G33360 | 26.786 | 280 | 174 | 12 | 10 | 278 | 12 | 271 | 4.64e-15 | 75.1 |
| MS.gene053310.t1 | AT4G33360 | 26.786 | 280 | 174 | 12 | 10 | 278 | 12 | 271 | 8.06e-15 | 74.7 |
Find 67 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTATCTTTCGGTAAATT+AGG | 0.089094 | 8.3:+39387259 | None:intergenic |
| CATTTGTCCTACACATGTTT+TGG | 0.214166 | 8.3:-39386929 | MS.gene053310:CDS |
| CTTTATCTTTCGGTAAATTA+GGG | 0.276712 | 8.3:+39387260 | None:intergenic |
| CGTAGTTGATGCAATACTTT+TGG | 0.281567 | 8.3:-39386443 | MS.gene053310:CDS |
| TTTAACAAGTGTTCATATTT+CGG | 0.294879 | 8.3:+39387665 | None:intergenic |
| AATAAGAAGGTGTGTGTAAC+TGG | 0.296410 | 8.3:-39389060 | MS.gene053310:CDS |
| AAAGTTTAGGTTGGAAATTC+AGG | 0.321089 | 8.3:-39385740 | MS.gene053310:CDS |
| CTGAATTTCGCGAAAAGAAC+TGG | 0.329580 | 8.3:-39386967 | MS.gene053310:CDS |
| TTCGTAGGGTACTTGTAGTT+TGG | 0.336746 | 8.3:+39386328 | None:intergenic |
| ATATGAACACTTGTTAAAAC+TGG | 0.343713 | 8.3:-39387660 | MS.gene053310:CDS |
| CACTATCATCATACAAGATT+TGG | 0.347439 | 8.3:-39386374 | MS.gene053310:CDS |
| CTGTTCTTCTGCTTCTGTCT+TGG | 0.348831 | 8.3:+39386993 | None:intergenic |
| ACTCTTCAAAGCAGATATCT+TGG | 0.353367 | 8.3:-39387615 | MS.gene053310:CDS |
| TCAGAGAAACTGCAAAGTTT+AGG | 0.360483 | 8.3:-39385753 | MS.gene053310:CDS |
| TTTGTGGTTGACTGTAAAAT+TGG | 0.360540 | 8.3:+39386904 | None:intergenic |
| TCATCAATCACTTTATCTTT+CGG | 0.362730 | 8.3:+39387250 | None:intergenic |
| AGAAATGTTACCTCAGGATT+AGG | 0.364457 | 8.3:+39387512 | None:intergenic |
| TGATTCTGTTGAGAGCTATA+AGG | 0.391851 | 8.3:-39385697 | MS.gene053310:CDS |
| TCCATGGACAAAGTAACCTT+TGG | 0.412376 | 8.3:+39388993 | None:intergenic |
| GAAAATGAAGCTTACTTCGT+AGG | 0.425779 | 8.3:+39386313 | None:intergenic |
| CAAGACAGAAGCAGAAGAAC+AGG | 0.437827 | 8.3:-39386992 | MS.gene053310:CDS |
| CAAAACATGTGTAGGACAAA+TGG | 0.439225 | 8.3:+39386930 | None:intergenic |
| AGTCAAGCTACTTGTATTTG+TGG | 0.440700 | 8.3:+39386888 | None:intergenic |
| TATCTGCTTTGAAGAGTGTA+AGG | 0.460836 | 8.3:+39387621 | None:intergenic |
| CATGGAACTGTTAGAGAGCC+TGG | 0.466759 | 8.3:-39388976 | MS.gene053310:intron |
| TCGGTTTACTCTGCAATTGT+TGG | 0.471908 | 8.3:-39387584 | MS.gene053310:CDS |
| TCCAAAGGTTACTTTGTCCA+TGG | 0.474794 | 8.3:-39388994 | MS.gene053310:CDS |
| CATTCGAGAATAAGTGTGCT+TGG | 0.475236 | 8.3:-39386483 | MS.gene053310:CDS |
| AGATATCTTGGATTATGAAT+CGG | 0.476489 | 8.3:-39387603 | MS.gene053310:CDS |
| GGTACAACTGTTGAAGGTAC+AGG | 0.487565 | 8.3:+39387533 | None:intergenic |
| AGAAACTGCAAAGTTTAGGT+TGG | 0.491298 | 8.3:-39385749 | MS.gene053310:CDS |
| AAGTGATTGATGAGTCTTGT+TGG | 0.503448 | 8.3:-39387240 | MS.gene053310:CDS |
| GGATTAGGTACAACTGTTGA+AGG | 0.511645 | 8.3:+39387527 | None:intergenic |
| CAGGTGGGTTTGTAGCATCA+TGG | 0.513595 | 8.3:-39389035 | MS.gene053310:CDS |
| TTCCACATTAGCTTTGAGAC+AGG | 0.513623 | 8.3:+39387324 | None:intergenic |
| TTGGAAATTCAGGCCATTGG+AGG | 0.514395 | 8.3:-39385730 | MS.gene053310:CDS |
| AAAATGAAGCTTACTTCGTA+GGG | 0.514933 | 8.3:+39386314 | None:intergenic |
| TATCATCATACAAGATTTGG+TGG | 0.521319 | 8.3:-39386371 | MS.gene053310:CDS |
| AGGTTGGAAATTCAGGCCAT+TGG | 0.521698 | 8.3:-39385733 | MS.gene053310:CDS |
| GTTAAGCTTCTTCTTTCCAA+AGG | 0.521805 | 8.3:-39389009 | MS.gene053310:CDS |
| GTTGAGAGCTATAAGGAGGC+TGG | 0.522498 | 8.3:-39385690 | MS.gene053310:CDS |
| TTAGCAGTTCCCTTCACAGC+AGG | 0.530766 | 8.3:+39387358 | None:intergenic |
| AGGAGATAATGGAAACAAGT+GGG | 0.540632 | 8.3:-39389095 | None:intergenic |
| TCAATGAGTGTTTCCTCCAA+TGG | 0.543548 | 8.3:+39385717 | None:intergenic |
| AGACTACTGCAAGAATACTA+AGG | 0.551184 | 8.3:-39387209 | MS.gene053310:intron |
| CAGGCTCTCTAACAGTTCCA+TGG | 0.553939 | 8.3:+39388977 | None:intergenic |
| AGTGATTGAGCCTGCTGTGA+AGG | 0.558611 | 8.3:-39387368 | MS.gene053310:CDS |
| AAGGTGTGTGTAACTGGAGC+AGG | 0.564196 | 8.3:-39389054 | MS.gene053310:CDS |
| ATGAGAATCACAAGGCAGAC+GGG | 0.568344 | 8.3:-39386417 | MS.gene053310:CDS |
| GGAGATAATGGAAACAAGTG+GGG | 0.572345 | 8.3:-39389094 | None:intergenic |
| ATTGGTCCCAAAACATGTGT+AGG | 0.579319 | 8.3:+39386922 | None:intergenic |
| GTGTGTGTAACTGGAGCAGG+TGG | 0.580174 | 8.3:-39389051 | MS.gene053310:CDS |
| TATGAGAATCACAAGGCAGA+CGG | 0.581333 | 8.3:-39386418 | MS.gene053310:CDS |
| GAGGAGATAATGGAAACAAG+TGG | 0.583352 | 8.3:-39389096 | None:intergenic |
| AAGGTACAGGGCTAGCAACA+TGG | 0.584108 | 8.3:+39387546 | None:intergenic |
| TGCTAGCAGCTATATTGAGA+TGG | 0.585082 | 8.3:-39385796 | MS.gene053310:intron |
| GGGTGTTAATAACAATAAGA+AGG | 0.597736 | 8.3:-39389073 | MS.gene053310:CDS |
| GTGATTGAGCCTGCTGTGAA+GGG | 0.614167 | 8.3:-39387367 | MS.gene053310:CDS |
| AGCCTGTCTCAAAGCTAATG+TGG | 0.618834 | 8.3:-39387326 | MS.gene053310:CDS |
| GTACAACTGTTGAAGGTACA+GGG | 0.621515 | 8.3:+39387534 | None:intergenic |
| TTCTGTTGAGAGCTATAAGG+AGG | 0.627623 | 8.3:-39385694 | MS.gene053310:CDS |
| GAGATAATGGAAACAAGTGG+GGG | 0.650626 | 8.3:-39389093 | None:intergenic |
| ACTTATTCTCGAATGAGTCA+CGG | 0.655492 | 8.3:+39386491 | None:intergenic |
| GAAAAGAACTGGACTTAACG+TGG | 0.670351 | 8.3:-39386956 | MS.gene053310:CDS |
| AACAGTTGTACCTAATCCTG+AGG | 0.672409 | 8.3:-39387522 | MS.gene053310:intron |
| TTTGGCTTATGAGAATCACA+AGG | 0.712000 | 8.3:-39386425 | MS.gene053310:CDS |
| TGTGTGTAACTGGAGCAGGT+GGG | 0.782982 | 8.3:-39389050 | MS.gene053310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAATTAATTAATTAATG+AGG | - | chr8.3:39388593-39388612 | MS.gene053310:intron | 10.0% |
| !! | AAGAATTTCATTACTATATA+TGG | - | chr8.3:39385950-39385969 | MS.gene053310:intron | 15.0% |
| !! | ATGAATTTCATTACTATATA+TGG | - | chr8.3:39386431-39386450 | MS.gene053310:CDS | 15.0% |
| !! | CTGATAATATTTAAATTTAG+AGG | + | chr8.3:39388493-39388512 | None:intergenic | 15.0% |
| !! | GGATTAAATATATATTTGTT+GGG | + | chr8.3:39386694-39386713 | None:intergenic | 15.0% |
| !! | TAATATTTAAATTTAGAGGT+TGG | + | chr8.3:39388489-39388508 | None:intergenic | 15.0% |
| !! | TGAAATTAGTTAAACTATAA+TGG | + | chr8.3:39388198-39388217 | None:intergenic | 15.0% |
| !!! | AAAAATAAAAAGTTTCGTTT+TGG | - | chr8.3:39386768-39386787 | MS.gene053310:intron | 15.0% |
| !!! | AAAATAAAAAGTTTCGTTTT+GGG | - | chr8.3:39386769-39386788 | MS.gene053310:intron | 15.0% |
| !!! | AGAAGTTCTAAAAAAATTTA+TGG | - | chr8.3:39386025-39386044 | MS.gene053310:intron | 15.0% |
| !!! | GATTAAATATATATTTGTTG+GGG | + | chr8.3:39386693-39386712 | None:intergenic | 15.0% |
| !!! | TTTTTAATACGAATTTGATA+AGG | + | chr8.3:39387930-39387949 | None:intergenic | 15.0% |
| !! | AAGAGTTTCATTACTATATA+TGG | - | chr8.3:39386270-39386289 | MS.gene053310:intron | 20.0% |
| !! | ACTATATATGGAAAATAACT+AGG | - | chr8.3:39385962-39385981 | MS.gene053310:intron | 20.0% |
| !! | ATCTCAAATATATACATACA+GGG | + | chr8.3:39386715-39386734 | None:intergenic | 20.0% |
| !! | GGGATTAAATATATATTTGT+TGG | + | chr8.3:39386695-39386714 | None:intergenic | 20.0% |
| !! | TTTAACAAGTGTTCATATTT+CGG | + | chr8.3:39387096-39387115 | None:intergenic | 20.0% |
| !!! | ATTTTTCAAAGGTCATATAT+AGG | + | chr8.3:39386924-39386943 | None:intergenic | 20.0% |
| !!! | CTGTTTTATCAAATTATCAT+TGG | - | chr8.3:39388852-39388871 | MS.gene053310:intron | 20.0% |
| !!! | TCATTTAGACAATTAGATTT+TGG | + | chr8.3:39386541-39386560 | None:intergenic | 20.0% |
| ! | AAAAAATAGAAGAATGCACA+AGG | + | chr8.3:39388018-39388037 | None:intergenic | 25.0% |
| ! | AAAATCATGTCTTTCTTAGA+AGG | - | chr8.3:39388244-39388263 | MS.gene053310:intron | 25.0% |
| ! | ACTATATATGGAAAGAAACT+AGG | - | chr8.3:39386122-39386141 | MS.gene053310:intron | 25.0% |
| ! | ACTGTTAATGTCAAAAACAT+AGG | - | chr8.3:39386660-39386679 | MS.gene053310:intron | 25.0% |
| ! | ACTTTATCTTTCGGTAAATT+AGG | + | chr8.3:39387502-39387521 | None:intergenic | 25.0% |
| ! | AGATATCTTGGATTATGAAT+CGG | - | chr8.3:39387155-39387174 | MS.gene053310:intron | 25.0% |
| ! | ATTAGTTAAACTATAATGGC+AGG | + | chr8.3:39388194-39388213 | None:intergenic | 25.0% |
| ! | CAGTGTTTATATAGATTTGA+TGG | - | chr8.3:39388913-39388932 | MS.gene053310:intron | 25.0% |
| ! | CATCTCAAATATATACATAC+AGG | + | chr8.3:39386716-39386735 | None:intergenic | 25.0% |
| ! | CTTTATCTTTCGGTAAATTA+GGG | + | chr8.3:39387501-39387520 | None:intergenic | 25.0% |
| ! | TCATCAATCACTTTATCTTT+CGG | + | chr8.3:39387511-39387530 | None:intergenic | 25.0% |
| ! | TTTGAATAGAATTGTTGAAG+AGG | - | chr8.3:39386984-39387003 | MS.gene053310:CDS | 25.0% |
| !! | ACTCTCATCAAACTTTTAAA+AGG | - | chr8.3:39387890-39387909 | MS.gene053310:intron | 25.0% |
| !! | ATATGAACACTTGTTAAAAC+TGG | - | chr8.3:39387098-39387117 | MS.gene053310:intron | 25.0% |
| !! | TTAATGAGGAGTATATGTAA+AGG | - | chr8.3:39388607-39388626 | MS.gene053310:intron | 25.0% |
| !!! | TATAGAAGTTTTGTAACACA+AGG | + | chr8.3:39387990-39388009 | None:intergenic | 25.0% |
| !!! | TTGATTTTAATCACATGTGT+AGG | + | chr8.3:39388827-39388846 | None:intergenic | 25.0% |
| AAAATGAAGCTTACTTCGTA+GGG | + | chr8.3:39388447-39388466 | None:intergenic | 30.0% | |
| AACATTAGAAATGTTACCTC+AGG | + | chr8.3:39387255-39387274 | None:intergenic | 30.0% | |
| AATTATGAATATGCCCTTCA+TGG | - | chr8.3:39388142-39388161 | MS.gene053310:intron | 30.0% | |
| AGTTCTATGATGGTCATAAA+TGG | + | chr8.3:39386621-39386640 | None:intergenic | 30.0% | |
| ATACTTGAAGCTTAATATGC+AGG | - | chr8.3:39387363-39387382 | MS.gene053310:CDS | 30.0% | |
| ATGGAAAATAACTAGGCTTA+AGG | - | chr8.3:39385969-39385988 | MS.gene053310:intron | 30.0% | |
| ATTATGAATATGCCCTTCAT+GGG | - | chr8.3:39388143-39388162 | MS.gene053310:intron | 30.0% | |
| ATTTGATAAGGCATATCAGT+AGG | + | chr8.3:39387918-39387937 | None:intergenic | 30.0% | |
| CACTATCATCATACAAGATT+TGG | - | chr8.3:39388384-39388403 | MS.gene053310:intron | 30.0% | |
| GACACTACTATCATATCATA+AGG | + | chr8.3:39387622-39387641 | None:intergenic | 30.0% | |
| GAGATATCAACAATTGTATC+AGG | - | chr8.3:39388656-39388675 | MS.gene053310:intron | 30.0% | |
| GGGTGTTAATAACAATAAGA+AGG | - | chr8.3:39385685-39385704 | MS.gene053310:CDS | 30.0% | |
| GGTTGAAAACAAAGCATAAA+GGG | + | chr8.3:39386891-39386910 | None:intergenic | 30.0% | |
| TATCATCATACAAGATTTGG+TGG | - | chr8.3:39388387-39388406 | MS.gene053310:intron | 30.0% | |
| TGGAATAATAATACCAGTTC+TGG | + | chr8.3:39387748-39387767 | None:intergenic | 30.0% | |
| TGGTTGAAAACAAAGCATAA+AGG | + | chr8.3:39386892-39386911 | None:intergenic | 30.0% | |
| TTTGTGGTTGACTGTAAAAT+TGG | + | chr8.3:39387857-39387876 | None:intergenic | 30.0% | |
| ! | ATTTGTCCTACACATGTTTT+GGG | - | chr8.3:39387830-39387849 | MS.gene053310:intron | 30.0% |
| ! | TTTTAGCCTCTATAAGTGTA+TGG | - | chr8.3:39388034-39388053 | MS.gene053310:intron | 30.0% |
| ! | TTTTGCAAGTTGCTACATAT+TGG | + | chr8.3:39386571-39386590 | None:intergenic | 30.0% |
| !! | AAAGTTTAGGTTGGAAATTC+AGG | - | chr8.3:39389018-39389037 | MS.gene053310:CDS | 30.0% |
| !!! | CAAGTATTCAGACTTTTTCA+TGG | + | chr8.3:39387350-39387369 | None:intergenic | 30.0% |
| ACTCTTCAAAGCAGATATCT+TGG | - | chr8.3:39387143-39387162 | MS.gene053310:intron | 35.0% | |
| ACTTATTCTCGAATGAGTCA+CGG | + | chr8.3:39388270-39388289 | None:intergenic | 35.0% | |
| AGAAACTGCAAAGTTTAGGT+TGG | - | chr8.3:39389009-39389028 | MS.gene053310:CDS | 35.0% | |
| AGAAATGTTACCTCAGGATT+AGG | + | chr8.3:39387249-39387268 | None:intergenic | 35.0% | |
| AGACTACTGCAAGAATACTA+AGG | - | chr8.3:39387549-39387568 | MS.gene053310:CDS | 35.0% | |
| AGTCAAGCTACTTGTATTTG+TGG | + | chr8.3:39387873-39387892 | None:intergenic | 35.0% | |
| ATATGAAGCATAGACACCTT+CGG | + | chr8.3:39386849-39386868 | None:intergenic | 35.0% | |
| ATGAGATGAGAAATAGTACC+AGG | + | chr8.3:39385803-39385822 | None:intergenic | 35.0% | |
| ATGGAAAGAAACTAGGCTTA+AGG | - | chr8.3:39386129-39386148 | MS.gene053310:intron | 35.0% | |
| ATGTCGTGTTTACTAACTTG+AGG | + | chr8.3:39387327-39387346 | None:intergenic | 35.0% | |
| CAAAACATGTGTAGGACAAA+TGG | + | chr8.3:39387831-39387850 | None:intergenic | 35.0% | |
| CAAAGGTCATATATAGGTCA+TGG | + | chr8.3:39386918-39386937 | None:intergenic | 35.0% | |
| GAAAATGAAGCTTACTTCGT+AGG | + | chr8.3:39388448-39388467 | None:intergenic | 35.0% | |
| GTTAAGCTTCTTCTTTCCAA+AGG | - | chr8.3:39385749-39385768 | MS.gene053310:CDS | 35.0% | |
| TCAGAGAAACTGCAAAGTTT+AGG | - | chr8.3:39389005-39389024 | MS.gene053310:CDS | 35.0% | |
| TCATATATAGGTCATGGAGT+TGG | + | chr8.3:39386912-39386931 | None:intergenic | 35.0% | |
| TCGAAAGAATGAGAGAAAAG+AGG | + | chr8.3:39387021-39387040 | None:intergenic | 35.0% | |
| TCTATGATGGTCATAAATGG+AGG | + | chr8.3:39386618-39386637 | None:intergenic | 35.0% | |
| TGATTCTGTTGAGAGCTATA+AGG | - | chr8.3:39389061-39389080 | MS.gene053310:CDS | 35.0% | |
| TTATGAATATGCCCTTCATG+GGG | - | chr8.3:39388144-39388163 | MS.gene053310:intron | 35.0% | |
| ! | AAGTGATTGATGAGTCTTGT+TGG | - | chr8.3:39387518-39387537 | MS.gene053310:intron | 35.0% |
| ! | AATAAGAAGGTGTGTGTAAC+TGG | - | chr8.3:39385698-39385717 | MS.gene053310:CDS | 35.0% |
| ! | AGTTCTTTTCGCGAAATTCA+GGG | + | chr8.3:39387792-39387811 | None:intergenic | 35.0% |
| ! | CATTTGTCCTACACATGTTT+TGG | - | chr8.3:39387829-39387848 | MS.gene053310:intron | 35.0% |
| ! | GGCTTAAGGACATGTAATTT+TGG | - | chr8.3:39385983-39386002 | MS.gene053310:intron | 35.0% |
| ! | TCTTTTCTCTCATTCTTTCG+AGG | - | chr8.3:39387020-39387039 | MS.gene053310:intron | 35.0% |
| ! | TTTGGCTTATGAGAATCACA+AGG | - | chr8.3:39388333-39388352 | MS.gene053310:intron | 35.0% |
| !! | CGTAGTTGATGCAATACTTT+TGG | - | chr8.3:39388315-39388334 | MS.gene053310:intron | 35.0% |
| !! | CTGTTGAGCAGATTTTTCAA+AGG | + | chr8.3:39386935-39386954 | None:intergenic | 35.0% |
| !! | TATCTGCTTTGAAGAGTGTA+AGG | + | chr8.3:39387140-39387159 | None:intergenic | 35.0% |
| AACACACGTTAGACACTTCT+TGG | + | chr8.3:39386742-39386761 | None:intergenic | 40.0% | |
| AACAGTTGTACCTAATCCTG+AGG | - | chr8.3:39387236-39387255 | MS.gene053310:CDS | 40.0% | |
| ACCATCATAGAACTCTGACA+CGG | - | chr8.3:39386627-39386646 | MS.gene053310:intron | 40.0% | |
| AGTGTATGTCTGAAAACTGC+AGG | - | chr8.3:39387066-39387085 | MS.gene053310:intron | 40.0% | |
| ATTGGTCCCAAAACATGTGT+AGG | + | chr8.3:39387839-39387858 | None:intergenic | 40.0% | |
| CAGAGAAAAATCCCCATGAA+GGG | + | chr8.3:39388158-39388177 | None:intergenic | 40.0% | |
| CATTCGAGAATAAGTGTGCT+TGG | - | chr8.3:39388275-39388294 | MS.gene053310:intron | 40.0% | |
| CTGAATTTCGCGAAAAGAAC+TGG | - | chr8.3:39387791-39387810 | MS.gene053310:intron | 40.0% | |
| CTTGAAGCTTAATATGCAGG+TGG | - | chr8.3:39387366-39387385 | MS.gene053310:CDS | 40.0% | |
| GAAAAGAACTGGACTTAACG+TGG | - | chr8.3:39387802-39387821 | MS.gene053310:intron | 40.0% | |
| GGATTAGGTACAACTGTTGA+AGG | + | chr8.3:39387234-39387253 | None:intergenic | 40.0% | |
| GTATGGCCATACACTTATAG+AGG | + | chr8.3:39388043-39388062 | None:intergenic | 40.0% | |
| TAATTTGATATGTCACCGCG+TGG | - | chr8.3:39387290-39387309 | MS.gene053310:CDS | 40.0% | |
| TATGAAGCATAGACACCTTC+GGG | + | chr8.3:39386848-39386867 | None:intergenic | 40.0% | |
| TATGAGAATCACAAGGCAGA+CGG | - | chr8.3:39388340-39388359 | MS.gene053310:intron | 40.0% | |
| TCAATGAGTGTTTCCTCCAA+TGG | + | chr8.3:39389044-39389063 | None:intergenic | 40.0% | |
| TCCATGGACAAAGTAACCTT+TGG | + | chr8.3:39385768-39385787 | None:intergenic | 40.0% | |
| TCGGTTTACTCTGCAATTGT+TGG | - | chr8.3:39387174-39387193 | MS.gene053310:intron | 40.0% | |
| TCTTTCGAGGTATGAGTGTT+GGG | - | chr8.3:39387033-39387052 | MS.gene053310:intron | 40.0% | |
| TGCTAGCAGCTATATTGAGA+TGG | - | chr8.3:39388962-39388981 | MS.gene053310:intron | 40.0% | |
| TTCTGTTGAGAGCTATAAGG+AGG | - | chr8.3:39389064-39389083 | MS.gene053310:CDS | 40.0% | |
| TTCTTTCGAGGTATGAGTGT+TGG | - | chr8.3:39387032-39387051 | MS.gene053310:intron | 40.0% | |
| ! | CAATGTAGCATCGAAACTTC+AGG | - | chr8.3:39388765-39388784 | MS.gene053310:intron | 40.0% |
| ! | CAGTTCTTTTCGCGAAATTC+AGG | + | chr8.3:39387793-39387812 | None:intergenic | 40.0% |
| ! | GTACAACTGTTGAAGGTACA+GGG | + | chr8.3:39387227-39387246 | None:intergenic | 40.0% |
| ! | TCCAAAGGTTACTTTGTCCA+TGG | - | chr8.3:39385764-39385783 | MS.gene053310:CDS | 40.0% |
| ! | TTCGTAGGGTACTTGTAGTT+TGG | + | chr8.3:39388433-39388452 | None:intergenic | 40.0% |
| ! | TTGAAGGTGTATCTTGTGTC+CGG | - | chr8.3:39388788-39388807 | MS.gene053310:intron | 40.0% |
| !! | TTCCACATTAGCTTTGAGAC+AGG | + | chr8.3:39387437-39387456 | None:intergenic | 40.0% |
| AAAACACGATTGCGGTGAAG+CGG | + | chr8.3:39388072-39388091 | None:intergenic | 45.0% | |
| AACACTGACACATTCACTGC+TGG | + | chr8.3:39388900-39388919 | None:intergenic | 45.0% | |
| AGCCTGTCTCAAAGCTAATG+TGG | - | chr8.3:39387432-39387451 | MS.gene053310:intron | 45.0% | |
| AGGTTGGAAATTCAGGCCAT+TGG | - | chr8.3:39389025-39389044 | MS.gene053310:CDS | 45.0% | |
| ATGAGAATCACAAGGCAGAC+GGG | - | chr8.3:39388341-39388360 | MS.gene053310:intron | 45.0% | |
| CAAGACAGAAGCAGAAGAAC+AGG | - | chr8.3:39387766-39387785 | MS.gene053310:intron | 45.0% | |
| CGTCACATATGATCCAGAAC+TGG | - | chr8.3:39387732-39387751 | MS.gene053310:intron | 45.0% | |
| CTGTTCTTCTGCTTCTGTCT+TGG | + | chr8.3:39387768-39387787 | None:intergenic | 45.0% | |
| GCAGAGAAAAATCCCCATGA+AGG | + | chr8.3:39388159-39388178 | None:intergenic | 45.0% | |
| GTAGAGTCATGAGAATGAGC+AGG | - | chr8.3:39388685-39388704 | MS.gene053310:intron | 45.0% | |
| TCCGTGTCAGAGTTCTATGA+TGG | + | chr8.3:39386631-39386650 | None:intergenic | 45.0% | |
| TTGCAAGTAATGTTGCGCGA+TGG | - | chr8.3:39388713-39388732 | MS.gene053310:intron | 45.0% | |
| TTGGAAATTCAGGCCATTGG+AGG | - | chr8.3:39389028-39389047 | MS.gene053310:CDS | 45.0% | |
| ! | CTTCACCGCAATCGTGTTTT+GGG | - | chr8.3:39388072-39388091 | MS.gene053310:intron | 45.0% |
| ! | GGTACAACTGTTGAAGGTAC+AGG | + | chr8.3:39387228-39387247 | None:intergenic | 45.0% |
| !! | GCATCGAAACTTCAGGTTGA+AGG | - | chr8.3:39388772-39388791 | MS.gene053310:intron | 45.0% |
| !! | TAAAAAAATTGAAAATTATT+AGG | + | chr8.3:39385830-39385849 | None:intergenic | 5.0% |
| AAACACGATTGCGGTGAAGC+GGG | + | chr8.3:39388071-39388090 | None:intergenic | 50.0% | |
| AAGGTGTGTGTAACTGGAGC+AGG | - | chr8.3:39385704-39385723 | MS.gene053310:CDS | 50.0% | |
| AGTGATTGAGCCTGCTGTGA+AGG | - | chr8.3:39387390-39387409 | MS.gene053310:intron | 50.0% | |
| CAGGCTCTCTAACAGTTCCA+TGG | + | chr8.3:39385784-39385803 | None:intergenic | 50.0% | |
| CATGGAACTGTTAGAGAGCC+TGG | - | chr8.3:39385782-39385801 | MS.gene053310:CDS | 50.0% | |
| CGACTCCCAAAACACGATTG+CGG | + | chr8.3:39388080-39388099 | None:intergenic | 50.0% | |
| GAGGCAAAACTAGAACCACG+CGG | + | chr8.3:39387308-39387327 | None:intergenic | 50.0% | |
| GTGATTGAGCCTGCTGTGAA+GGG | - | chr8.3:39387391-39387410 | MS.gene053310:intron | 50.0% | |
| GTTGAGAGCTATAAGGAGGC+TGG | - | chr8.3:39389068-39389087 | MS.gene053310:CDS | 50.0% | |
| TGTGTGTAACTGGAGCAGGT+GGG | - | chr8.3:39385708-39385727 | MS.gene053310:CDS | 50.0% | |
| TTAGCAGTTCCCTTCACAGC+AGG | + | chr8.3:39387403-39387422 | None:intergenic | 50.0% | |
| ! | AAGGTACAGGGCTAGCAACA+TGG | + | chr8.3:39387215-39387234 | None:intergenic | 50.0% |
| ! | CAGGTGGGTTTGTAGCATCA+TGG | - | chr8.3:39385723-39385742 | MS.gene053310:CDS | 50.0% |
| ! | GCTTCACCGCAATCGTGTTT+TGG | - | chr8.3:39388071-39388090 | MS.gene053310:intron | 50.0% |
| ! | TGTAGGTATCGTCTCGATGC+CGG | + | chr8.3:39388810-39388829 | None:intergenic | 50.0% |
| !!! | CGCAATCGTGTTTTGGGAGT+CGG | - | chr8.3:39388078-39388097 | MS.gene053310:intron | 50.0% |
| ACAGAGACGCGAAATCCCGA+AGG | - | chr8.3:39386830-39386849 | MS.gene053310:intron | 55.0% | |
| GTGTGTGTAACTGGAGCAGG+TGG | - | chr8.3:39385707-39385726 | MS.gene053310:CDS | 55.0% | |
| GATTGCGGTGAAGCGGGTAG+TGG | + | chr8.3:39388065-39388084 | None:intergenic | 60.0% | |
| ! | CGGTGAAGCGGGTAGTGGTA+TGG | + | chr8.3:39388060-39388079 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 39385671 | 39389109 | 39385671 | ID=MS.gene053310 |
| chr8.3 | mRNA | 39385671 | 39389109 | 39385671 | ID=MS.gene053310.t1;Parent=MS.gene053310 |
| chr8.3 | exon | 39388977 | 39389109 | 39388977 | ID=MS.gene053310.t1.exon1;Parent=MS.gene053310.t1 |
| chr8.3 | CDS | 39388977 | 39389109 | 39388977 | ID=cds.MS.gene053310.t1;Parent=MS.gene053310.t1 |
| chr8.3 | exon | 39387523 | 39387692 | 39387523 | ID=MS.gene053310.t1.exon2;Parent=MS.gene053310.t1 |
| chr8.3 | CDS | 39387523 | 39387692 | 39387523 | ID=cds.MS.gene053310.t1;Parent=MS.gene053310.t1 |
| chr8.3 | exon | 39387210 | 39387395 | 39387210 | ID=MS.gene053310.t1.exon3;Parent=MS.gene053310.t1 |
| chr8.3 | CDS | 39387210 | 39387395 | 39387210 | ID=cds.MS.gene053310.t1;Parent=MS.gene053310.t1 |
| chr8.3 | exon | 39386869 | 39387031 | 39386869 | ID=MS.gene053310.t1.exon4;Parent=MS.gene053310.t1 |
| chr8.3 | CDS | 39386869 | 39387031 | 39386869 | ID=cds.MS.gene053310.t1;Parent=MS.gene053310.t1 |
| chr8.3 | exon | 39386328 | 39386514 | 39386328 | ID=MS.gene053310.t1.exon5;Parent=MS.gene053310.t1 |
| chr8.3 | CDS | 39386328 | 39386514 | 39386328 | ID=cds.MS.gene053310.t1;Parent=MS.gene053310.t1 |
| chr8.3 | exon | 39385671 | 39385809 | 39385671 | ID=MS.gene053310.t1.exon6;Parent=MS.gene053310.t1 |
| chr8.3 | CDS | 39385671 | 39385809 | 39385671 | ID=cds.MS.gene053310.t1;Parent=MS.gene053310.t1 |
| Gene Sequence |
| Protein sequence |
