AlfalfaGEDB | MS.gene054480

M. sativa cultivar XinJiangDaYe / MS.gene054480

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054480.t1	XP_003622605.1	86	235	10	2	1	212	1	235	8.70E-59	236.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054480.t1	Q8LBQ7	60.8	194	35	2	52	204	96	289	4.3e-38	159.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054480.t1	G7KUW7	86.0	235	10	2	1	212	1	235	6.3e-59	236.9

TFs/TRs:

Gene ID	Type	Classification
MS.gene054480.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050657	MS.gene054480	0.800829	1.20E-48	-1.69E-46
MS.gene054480	MS.gene063542	0.800708	1.27E-48	-1.69E-46
MS.gene054480	MS.gene21826	0.816204	6.24E-52	-1.69E-46
MS.gene054480	MS.gene22707	0.828135	1.06E-54	-1.69E-46
MS.gene054480	MS.gene24320	0.807896	4.04E-50	-1.69E-46
MS.gene054480	MS.gene24806	0.807768	4.30E-50	-1.69E-46
MS.gene054480	MS.gene25244	0.808525	2.97E-50	-1.69E-46
MS.gene054480	MS.gene26380	0.802969	4.36E-49	-1.69E-46
MS.gene054480	MS.gene26659	0.804441	2.16E-49	-1.69E-46
MS.gene054480	MS.gene27350	0.82556	4.39E-54	-1.69E-46
MS.gene054480	MS.gene28717	0.83172	1.42E-55	-1.69E-46
MS.gene054480	MS.gene45624	0.80509	1.58E-49	-1.69E-46
MS.gene054480	MS.gene49467	0.804248	2.37E-49	-1.69E-46
MS.gene054480	MS.gene60163	0.803322	3.68E-49	-1.69E-46
MS.gene054480	MS.gene67298	0.80121	1.00E-48	-1.69E-46
MS.gene054480	MS.gene67299	0.801324	9.50E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054480.t1	MTR_7g046260	87.234	235	7	3	1	212	1	235	1.88e-144	402
MS.gene054480.t1	MTR_8g006410	69.613	181	43	6	39	212	32	207	4.90e-70	213
MS.gene054480.t1	MTR_5g012910	65.693	137	40	2	43	179	15	144	9.79e-53	167
MS.gene054480.t1	MTR_2g101340	63.433	134	36	2	7	140	5	125	9.88e-48	155
MS.gene054480.t1	MTR_4g100650	51.579	190	65	6	49	212	66	254	1.04e-46	155
MS.gene054480.t1	MTR_3g110205	56.618	136	49	2	51	176	38	173	3.39e-45	149
MS.gene054480.t1	MTR_8g102800	71.910	89	25	0	42	130	23	111	7.63e-43	144
MS.gene054480.t1	MTR_6g088405	78.409	88	19	0	53	140	41	128	1.14e-41	140
MS.gene054480.t1	MTR_8g013860	64.348	115	40	1	26	140	18	131	5.00e-41	139
MS.gene054480.t1	MTR_6g088425	62.698	126	40	1	22	140	8	133	7.72e-40	136
MS.gene054480.t1	MTR_1g101600	43.367	196	98	5	22	211	12	200	5.81e-38	130
MS.gene054480.t1	MTR_1g006660	63.208	106	35	1	25	130	20	121	7.48e-37	129
MS.gene054480.t1	MTR_7g117690	61.628	86	33	0	45	130	17	102	3.07e-36	125
MS.gene054480.t1	MTR_6g466130	55.856	111	47	1	29	137	37	147	4.94e-35	124
MS.gene054480.t1	MTR_6g466000	60.396	101	33	1	37	137	45	138	5.98e-35	124
MS.gene054480.t1	MTR_6g465850	65.909	88	30	0	50	137	57	144	3.00e-34	123
MS.gene054480.t1	MTR_6g465460	59.000	100	41	0	38	137	36	135	5.44e-34	122
MS.gene054480.t1	MTR_6g465430	58.000	100	42	0	38	137	36	135	1.61e-33	120
MS.gene054480.t1	MTR_6g465530	52.542	118	47	2	22	137	4	114	2.53e-33	119
MS.gene054480.t1	MTR_5g010940	46.897	145	68	3	10	148	11	152	7.64e-33	118
MS.gene054480.t1	MTR_6g465690	51.240	121	55	2	12	130	19	137	7.91e-33	119
MS.gene054480.t1	MTR_6g465420	56.436	101	44	0	37	137	35	135	2.15e-32	118
MS.gene054480.t1	MTR_6g465450	48.000	125	63	1	6	130	6	128	6.07e-32	116
MS.gene054480.t1	MTR_6g465510	51.351	111	45	2	22	130	4	107	1.14e-31	114
MS.gene054480.t1	MTR_5g010910	52.991	117	47	2	40	148	31	147	4.52e-30	111
MS.gene054480.t1	MTR_8g027465	58.621	87	33	1	47	130	30	116	5.89e-30	109
MS.gene054480.t1	MTR_4g102670	64.557	79	27	1	52	130	11	88	6.53e-30	108
MS.gene054480.t1	MTR_4g035430	45.833	120	62	1	43	162	22	138	1.57e-29	109
MS.gene054480.t1	MTR_2g085015	52.542	118	54	2	22	137	13	130	3.31e-29	108
MS.gene054480.t1	MTR_5g010930	51.887	106	45	1	40	139	33	138	3.98e-26	100
MS.gene054480.t1	MTR_4g102660	52.252	111	47	3	23	130	14	121	4.32e-25	98.2
MS.gene054480.t1	MTR_6g466020	60.811	74	29	0	51	124	38	111	8.52e-25	96.3
MS.gene054480.t1	MTR_5g008550	52.632	95	45	0	43	137	8	102	1.19e-24	96.3
MS.gene054480.t1	MTR_2g043050	37.356	174	73	5	56	209	19	176	1.47e-24	96.7
MS.gene054480.t1	MTR_5g008590	49.550	111	56	0	56	166	11	121	2.29e-24	95.5
MS.gene054480.t1	MTR_1g014780	40.123	162	87	4	20	174	4	162	3.19e-24	95.9
MS.gene054480.t1	MTR_1g019110	50.538	93	38	1	56	140	44	136	2.94e-23	92.4
MS.gene054480.t1	MTR_5g008470	52.500	80	38	0	58	137	77	156	1.81e-22	90.1
MS.gene054480.t1	MTR_2g105380	44.643	112	51	2	10	117	74	178	1.97e-22	93.6
MS.gene054480.t1	MTR_2g435590	40.164	122	55	3	7	126	55	160	2.31e-22	91.7
MS.gene054480.t1	MTR_1g014800	42.953	149	62	5	18	157	2	136	2.50e-22	90.9
MS.gene054480.t1	MTR_1g014820	43.548	124	53	2	18	137	2	112	2.85e-22	91.7
MS.gene054480.t1	MTR_8g022820	49.438	89	38	1	24	112	98	179	3.83e-22	93.2
MS.gene054480.t1	MTR_8g022820	49.438	89	38	1	24	112	99	180	4.07e-22	93.2
MS.gene054480.t1	MTR_8g022820	49.438	89	38	1	24	112	99	180	4.07e-22	93.2
MS.gene054480.t1	MTR_7g020980	63.934	61	22	0	52	112	47	107	4.34e-22	89.0
MS.gene054480.t1	MTR_5g016750	50.602	83	38	1	35	114	1	83	6.94e-22	88.6
MS.gene054480.t1	MTR_7g021010	42.718	103	59	0	10	112	5	107	7.38e-22	88.6
MS.gene054480.t1	MTR_4g086220	53.521	71	33	0	56	126	96	166	9.04e-22	89.7
MS.gene054480.t1	MTR_4g086165	56.522	69	30	0	52	120	78	146	1.26e-21	88.6
MS.gene054480.t1	MTR_3g102100	53.425	73	34	0	42	114	31	103	1.28e-21	87.8
MS.gene054480.t1	MTR_2g089170	60.274	73	27	1	56	128	65	135	1.41e-21	88.2
MS.gene054480.t1	MTR_5g083340	65.000	60	21	0	56	115	85	144	2.62e-21	90.9
MS.gene054480.t1	MTR_7g021010	62.295	61	23	0	52	112	8	68	2.67e-21	85.9
MS.gene054480.t1	MTR_1g014860	48.958	96	42	2	49	137	15	110	3.63e-21	87.8
MS.gene054480.t1	MTR_1g090170	57.812	64	27	0	51	114	147	210	5.69e-21	89.0
MS.gene054480.t1	MTR_4g086160	58.730	63	26	0	56	118	96	158	7.43e-21	87.0
MS.gene054480.t1	MTR_7g092190	49.412	85	43	0	30	114	4	88	1.02e-20	87.8
MS.gene054480.t1	MTR_4g010640	41.176	119	62	2	51	164	2	117	1.06e-20	86.3
MS.gene054480.t1	MTR_4g086190	58.730	63	26	0	56	118	96	158	1.16e-20	86.7
MS.gene054480.t1	MTR_1g090170	57.812	64	27	0	51	114	234	297	1.19e-20	89.0
MS.gene054480.t1	MTR_1g028560	50.617	81	38	2	56	135	115	194	4.62e-20	87.0
MS.gene054480.t1	MTR_3g074130	62.712	59	22	0	56	114	150	208	1.11e-19	85.9
MS.gene054480.t1	MTR_2g103700	41.284	109	57	2	56	164	7	108	1.42e-19	82.4
MS.gene054480.t1	MTR_1g087920	62.069	58	22	0	56	113	77	134	1.50e-19	85.1
MS.gene054480.t1	MTR_1g048610	46.847	111	46	4	12	112	39	146	1.60e-19	83.6
MS.gene054480.t1	MTR_5g062700	61.017	59	23	0	56	114	173	231	2.04e-19	85.5
MS.gene054480.t1	MTR_8g092460	56.716	67	28	1	46	112	136	201	2.46e-19	84.7
MS.gene054480.t1	MTR_4g114570	41.176	119	48	4	56	164	7	113	2.57e-19	82.8
MS.gene054480.t1	MTR_4g078710	51.807	83	37	1	30	112	5	84	2.75e-19	82.8
MS.gene054480.t1	MTR_2g090235	61.017	59	23	0	56	114	218	276	2.98e-19	85.5
MS.gene054480.t1	MTR_3g053690	59.016	61	25	0	52	112	23	83	3.98e-19	82.4
MS.gene054480.t1	MTR_0939s0010	61.017	59	23	0	56	114	65	123	4.06e-19	81.6
MS.gene054480.t1	MTR_2g043030	47.561	82	43	0	56	137	19	100	5.48e-19	81.6
MS.gene054480.t1	MTR_3g072610	50.962	104	47	2	38	137	7	110	6.99e-19	81.6
MS.gene054480.t1	MTR_3g105510	45.263	95	47	2	47	137	29	122	7.80e-19	82.0
MS.gene054480.t1	MTR_2g015050	51.685	89	35	3	25	112	110	191	8.08e-19	82.4
MS.gene054480.t1	MTR_1g101550	66.667	75	24	1	56	130	57	130	8.24e-19	81.6
MS.gene054480.t1	MTR_5g082950	64.286	56	20	0	56	111	66	121	1.12e-18	82.8
MS.gene054480.t1	MTR_2g043040	46.341	82	44	0	56	137	19	100	1.58e-18	80.9
MS.gene054480.t1	MTR_3g090760	49.333	75	35	2	56	127	113	187	1.59e-18	82.8
MS.gene054480.t1	MTR_4g088005	44.086	93	44	2	22	113	30	115	1.79e-18	78.2
MS.gene054480.t1	MTR_8g090350	57.627	59	25	0	56	114	113	171	2.07e-18	81.6
MS.gene054480.t1	MTR_5g083330	61.667	60	23	0	56	115	35	94	2.30e-18	81.6
MS.gene054480.t1	MTR_1g074310	51.389	72	34	1	43	113	8	79	2.87e-18	78.2
MS.gene054480.t1	MTR_1g070070	51.351	74	35	1	41	113	6	79	3.08e-18	78.2
MS.gene054480.t1	MTR_5g008790	46.667	90	43	2	56	140	18	107	3.13e-18	78.6
MS.gene054480.t1	MTR_2g014340	52.857	70	33	0	49	118	12	81	3.24e-18	79.3
MS.gene054480.t1	MTR_4g008860	64.912	57	20	0	56	112	8	64	4.31e-18	79.0
MS.gene054480.t1	MTR_1g070015	41.803	122	46	5	4	111	30	140	6.19e-18	79.3
MS.gene054480.t1	MTR_2g043020	41.509	106	60	1	56	161	19	122	6.22e-18	79.0
MS.gene054480.t1	MTR_8g006840	58.462	65	26	1	51	114	120	184	6.86e-18	78.6
MS.gene054480.t1	MTR_1g074230	55.224	67	29	1	48	113	11	77	6.91e-18	77.0
MS.gene054480.t1	MTR_6g465990	40.678	118	46	4	15	130	2	97	7.51e-18	78.2
MS.gene054480.t1	MTR_3g106290	64.912	57	20	0	56	112	8	64	1.01e-17	77.8
MS.gene054480.t1	MTR_8g099215	38.889	108	57	1	56	163	107	205	1.37e-17	79.7
MS.gene054480.t1	MTR_2g078680	59.649	57	23	0	56	112	31	87	2.13e-17	77.4
MS.gene054480.t1	MTR_5g009620	45.161	93	38	3	32	111	75	167	2.80e-17	79.0
MS.gene054480.t1	MTR_3g105480	46.429	84	41	1	58	137	33	116	2.93e-17	77.4
MS.gene054480.t1	MTR_1g090290	50.000	72	33	2	42	112	101	170	3.05e-17	76.6
MS.gene054480.t1	MTR_7g096750	58.065	62	25	1	52	112	16	77	3.06e-17	75.5
MS.gene054480.t1	MTR_7g096700	50.685	73	35	1	42	113	6	78	5.03e-17	75.1
MS.gene054480.t1	MTR_7g081795	43.158	95	53	1	21	114	25	119	6.33e-17	76.3
MS.gene054480.t1	MTR_8g006825	56.667	60	25	1	56	114	96	155	1.61e-16	75.1
MS.gene054480.t1	MTR_7g081815	56.667	60	25	1	56	114	61	120	1.69e-16	75.1
MS.gene054480.t1	MTR_7g081805	56.667	60	25	1	56	114	61	120	1.87e-16	75.1
MS.gene054480.t1	MTR_7g096810	60.606	66	25	1	49	113	6	71	3.13e-16	72.4
MS.gene054480.t1	MTR_2g438180	51.471	68	32	1	47	113	5	72	3.21e-16	72.4
MS.gene054480.t1	MTR_5g008540	52.459	61	29	0	58	118	26	86	3.27e-16	71.6
MS.gene054480.t1	MTR_7g028925	50.725	69	31	1	45	113	18	83	5.76e-16	70.9
MS.gene054480.t1	MTR_6g033255	58.904	73	30	0	47	119	11	83	6.05e-16	73.6
MS.gene054480.t1	MTR_5g075570	49.180	61	31	0	52	112	120	180	6.11e-16	74.7
MS.gene054480.t1	MTR_5g085070	46.053	76	41	0	37	112	32	107	6.18e-16	74.7
MS.gene054480.t1	MTR_4g100420	58.621	58	23	1	56	112	157	214	7.38e-16	74.7
MS.gene054480.t1	MTR_4g100450	58.621	58	23	1	56	112	154	211	7.53e-16	74.7
MS.gene054480.t1	MTR_5g032820	52.113	71	32	1	56	126	46	114	8.57e-16	75.1
MS.gene054480.t1	MTR_2g015040	56.897	58	24	1	56	112	63	120	9.50e-16	72.0
MS.gene054480.t1	MTR_7g085810	45.882	85	44	1	27	111	3	85	1.04e-15	73.9
MS.gene054480.t1	MTR_8g006815	56.667	60	25	1	56	114	96	155	1.13e-15	72.8
MS.gene054480.t1	MTR_1g074250	52.381	63	28	1	53	113	16	78	1.28e-15	70.9
MS.gene054480.t1	MTR_3g095190	43.697	119	62	2	12	125	122	240	1.64e-15	74.3
MS.gene054480.t1	MTR_7g070220	47.059	85	38	1	34	111	56	140	1.95e-15	74.7
MS.gene054480.t1	MTR_1g070035	40.000	100	53	2	13	111	40	133	2.19e-15	72.4
MS.gene054480.t1	MTR_5g085100	53.226	62	29	0	51	112	41	102	2.34e-15	73.2
MS.gene054480.t1	MTR_1g069960	62.903	62	22	1	56	116	27	88	2.41e-15	70.5
MS.gene054480.t1	MTR_3g098580	50.000	78	39	0	39	116	59	136	2.71e-15	72.8
MS.gene054480.t1	MTR_4g054740	43.564	101	40	3	19	112	64	154	2.92e-15	72.4
MS.gene054480.t1	MTR_4g054360	55.932	59	25	1	55	112	123	181	3.00e-15	72.8
MS.gene054480.t1	MTR_5g058470	56.627	83	32	3	52	130	92	174	3.25e-15	73.2
MS.gene054480.t1	MTR_4g100380	44.444	90	37	2	24	112	125	202	3.35e-15	72.4
MS.gene054480.t1	MTR_2g014300	56.140	57	25	0	56	112	15	71	3.35e-15	70.9
MS.gene054480.t1	MTR_2g016730	34.014	147	84	3	44	190	11	144	3.69e-15	73.2
MS.gene054480.t1	MTR_1g069985	43.689	103	43	4	10	111	43	131	3.90e-15	71.6
MS.gene054480.t1	MTR_7g011630	35.833	120	57	3	27	146	25	124	4.44e-15	73.6
MS.gene054480.t1	MTR_8g069360	52.174	69	30	1	56	121	44	112	5.65e-15	73.2
MS.gene054480.t1	MTR_1g060910	43.750	96	48	2	60	153	3	94	7.45e-15	70.1
MS.gene054480.t1	MTR_1g070000	39.815	108	49	3	10	111	43	140	8.25e-15	70.9
MS.gene054480.t1	MTR_2g019750	42.169	83	43	1	29	111	28	105	8.28e-15	72.0
MS.gene054480.t1	MTR_1g040430	40.000	125	71	3	5	127	62	184	2.83e-14	68.9
MS.gene054480.t1	MTR_4g054860	57.895	57	23	1	57	112	132	188	3.27e-14	70.1
MS.gene054480.t1	MTR_4g119270	39.286	84	46	1	28	111	30	108	4.25e-14	70.1
MS.gene054480.t1	MTR_1g012470	37.615	109	53	2	56	154	7	110	6.60e-14	67.8
MS.gene054480.t1	MTR_1g070045	43.902	82	38	2	31	111	48	122	7.34e-14	67.0
MS.gene054480.t1	MTR_3g107380	63.158	57	21	0	56	112	8	64	7.89e-14	67.8
MS.gene054480.t1	MTR_1g023170	44.706	85	47	0	31	115	15	99	8.11e-14	68.9
MS.gene054480.t1	MTR_6g041970	42.169	83	35	1	55	137	17	86	8.62e-14	65.1
MS.gene054480.t1	MTR_8g085960	36.585	123	73	3	31	153	4	121	2.10e-13	67.4
MS.gene054480.t1	MTR_6g012970	39.560	91	46	2	56	146	38	119	2.18e-13	68.6
MS.gene054480.t1	MTR_3g112440	48.052	77	40	0	56	132	39	115	3.40e-13	66.6
MS.gene054480.t1	MTR_4g112490	43.056	72	41	0	42	113	39	110	3.90e-13	65.9
MS.gene054480.t1	MTR_4g111915	43.056	72	41	0	42	113	39	110	3.91e-13	64.7
MS.gene054480.t1	MTR_8g032610	48.529	68	32	1	47	111	15	82	6.46e-13	66.6
MS.gene054480.t1	MTR_5g009410	60.606	66	26	0	49	114	110	175	6.93e-13	66.6
MS.gene054480.t1	MTR_1g070020	51.724	58	27	1	55	111	69	126	8.66e-13	65.1
MS.gene054480.t1	MTR_7g084370	46.479	71	36	1	56	126	42	110	1.16e-12	65.9
MS.gene054480.t1	MTR_8g023680	60.000	45	18	0	56	100	116	160	1.20e-12	66.2
MS.gene054480.t1	MTR_7g096830	41.509	106	45	3	14	112	60	155	3.73e-12	63.9
MS.gene054480.t1	MTR_8g023700	52.830	53	23	1	56	106	117	169	4.01e-12	64.7
MS.gene054480.t1	MTR_1g110970	39.604	101	52	2	5	103	51	144	5.38e-12	64.3
MS.gene054480.t1	MTR_1g105400	55.319	47	21	0	56	102	115	161	1.07e-11	63.5
MS.gene054480.t1	MTR_1g074370	54.839	62	27	1	52	112	69	130	1.12e-11	62.0
MS.gene054480.t1	MTR_1g069940	55.932	59	25	1	55	112	94	152	1.24e-11	62.4
MS.gene054480.t1	MTR_6g029180	41.096	73	43	0	39	111	16	88	1.32e-11	62.8
MS.gene054480.t1	MTR_1g097190	53.061	49	23	0	56	104	23	71	1.59e-11	60.1
MS.gene054480.t1	MTR_1g069945	56.452	62	25	2	52	112	98	158	2.67e-11	61.6
MS.gene054480.t1	MTR_1g043350	39.286	112	52	3	2	111	41	138	3.10e-11	60.8
MS.gene054480.t1	MTR_4g082345	41.111	90	44	2	56	145	48	128	3.27e-11	62.0
MS.gene054480.t1	MTR_5g085125	45.161	62	34	0	51	112	11	72	7.98e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene054480.t1	AT2G44940	53.431	204	53	5	42	204	87	289	4.88e-62	195
MS.gene054480.t1	AT5G11590	64.957	117	39	1	23	139	20	134	1.24e-47	156
MS.gene054480.t1	AT4G32800	68.627	102	31	1	41	142	5	105	7.79e-47	154
MS.gene054480.t1	AT2G35700	64.122	131	42	2	51	177	40	169	6.62e-46	150
MS.gene054480.t1	AT3G60490	48.544	206	66	7	35	204	48	249	9.31e-46	152
MS.gene054480.t1	AT5G25810	71.429	98	28	0	42	139	22	119	1.53e-45	150
MS.gene054480.t1	AT4G16750	53.750	160	65	1	20	179	4	154	4.71e-45	148
MS.gene054480.t1	AT3G16280	75.949	79	19	0	52	130	57	135	2.89e-40	137
MS.gene054480.t1	AT3G16280	75.949	79	19	0	52	130	75	153	4.94e-40	137
MS.gene054480.t1	AT2G25820	63.717	113	39	1	55	167	25	135	1.55e-39	135
MS.gene054480.t1	AT1G01250	53.846	117	48	1	14	130	9	119	2.94e-39	134
MS.gene054480.t1	AT5G51990	52.672	131	57	1	7	137	10	135	5.55e-38	131
MS.gene054480.t1	AT4G25470	45.238	168	76	5	5	172	6	157	1.36e-35	125
MS.gene054480.t1	AT4G25480	43.713	167	79	3	29	185	29	190	3.60e-33	119
MS.gene054480.t1	AT1G77200	70.297	101	25	1	41	141	33	128	8.18e-33	119
MS.gene054480.t1	AT1G63030	56.863	102	42	1	40	139	12	113	3.06e-32	115
MS.gene054480.t1	AT1G63030	56.863	102	42	1	40	139	12	113	3.06e-32	115
MS.gene054480.t1	AT4G25490	47.297	148	65	2	50	185	42	188	3.31e-32	116
MS.gene054480.t1	AT1G71450	48.438	128	64	1	37	162	3	130	6.35e-32	114
MS.gene054480.t1	AT2G36450	48.322	149	66	2	48	185	7	155	3.20e-31	113
MS.gene054480.t1	AT1G12610	54.000	100	46	0	40	139	14	113	4.99e-31	113
MS.gene054480.t1	AT1G74930	40.690	145	77	2	42	178	7	150	3.56e-27	102
MS.gene054480.t1	AT1G21910	59.551	89	29	2	56	137	50	138	1.85e-26	102
MS.gene054480.t1	AT3G57600	51.163	86	41	1	56	141	28	112	1.25e-24	98.2
MS.gene054480.t1	AT1G33760	60.227	88	34	1	55	142	19	105	2.38e-24	95.1
MS.gene054480.t1	AT3G16770	47.664	107	46	2	8	114	41	137	6.01e-24	95.9
MS.gene054480.t1	AT5G52020	42.361	144	72	2	52	185	61	203	7.44e-24	95.1
MS.gene054480.t1	AT2G23340	42.276	123	47	2	56	154	28	150	7.80e-24	93.6
MS.gene054480.t1	AT4G06746	53.846	78	36	0	35	112	15	92	3.10e-23	91.3
MS.gene054480.t1	AT2G47520	46.667	105	48	2	9	113	11	107	3.82e-23	91.7
MS.gene054480.t1	AT4G13620	54.430	79	36	0	40	118	216	294	3.83e-23	95.9
MS.gene054480.t1	AT5G61890	50.602	83	41	0	34	116	68	150	5.60e-23	93.2
MS.gene054480.t1	AT4G36900	66.102	59	20	0	56	114	30	88	6.27e-23	92.0
MS.gene054480.t1	AT3G11020	37.324	142	68	3	50	173	72	210	1.14e-22	94.0
MS.gene054480.t1	AT1G46768	60.294	68	26	1	47	114	23	89	3.07e-22	88.6
MS.gene054480.t1	AT3G50260	51.807	83	34	2	56	138	21	97	3.27e-22	89.0
MS.gene054480.t1	AT1G46768	60.294	68	26	1	47	114	23	89	4.18e-22	88.6
MS.gene054480.t1	AT1G46768	60.294	68	26	1	47	114	23	89	4.18e-22	88.6
MS.gene054480.t1	AT2G33710	41.803	122	52	3	8	124	36	143	4.20e-22	90.5
MS.gene054480.t1	AT2G33710	41.803	122	52	3	8	124	36	143	4.62e-22	90.1
MS.gene054480.t1	AT5G67190	62.712	59	22	0	56	114	21	79	5.20e-22	89.0
MS.gene054480.t1	AT5G21960	47.059	85	45	0	54	138	5	89	5.64e-22	89.7
MS.gene054480.t1	AT5G13330	50.000	86	40	1	40	125	23	105	8.69e-22	89.4
MS.gene054480.t1	AT2G22200	41.441	111	57	2	56	164	71	175	1.53e-21	89.7
MS.gene054480.t1	AT4G28140	64.912	57	20	0	56	112	143	199	4.18e-21	89.0
MS.gene054480.t1	AT4G39780	41.463	123	52	3	12	114	29	151	4.52e-21	88.6
MS.gene054480.t1	AT1G12630	66.216	74	24	1	52	125	15	87	5.21e-21	86.7
MS.gene054480.t1	AT1G36060	52.128	94	34	3	56	142	143	232	9.98e-21	88.6
MS.gene054480.t1	AT1G22190	61.290	62	24	0	56	117	83	144	1.12e-20	87.4
MS.gene054480.t1	AT2G20880	50.649	77	38	0	56	132	187	263	1.17e-20	88.6
MS.gene054480.t1	AT1G78080	62.903	62	23	0	56	117	152	213	1.22e-20	88.6
MS.gene054480.t1	AT1G71520	45.455	99	49	2	46	140	4	101	2.18e-20	84.0
MS.gene054480.t1	AT1G77640	55.682	88	33	1	56	137	43	130	3.62e-20	85.5
MS.gene054480.t1	AT3G23230	58.462	65	26	1	50	113	14	78	3.85e-20	83.2
MS.gene054480.t1	AT1G22810	42.727	110	60	2	56	163	14	122	7.74e-20	82.4
MS.gene054480.t1	AT5G25390	59.677	62	25	0	56	117	7	68	9.18e-20	83.2
MS.gene054480.t1	AT4G31060	47.917	96	43	2	50	140	21	114	1.04e-19	83.2
MS.gene054480.t1	AT5G05410	63.793	58	21	0	55	112	78	135	1.61e-19	85.1
MS.gene054480.t1	AT1G19210	48.780	82	42	0	56	137	12	93	1.79e-19	82.4
MS.gene054480.t1	AT5G05410	63.793	58	21	0	55	112	78	135	2.01e-19	85.1
MS.gene054480.t1	AT5G07580	47.253	91	47	1	38	127	92	182	2.25e-19	82.8
MS.gene054480.t1	AT5G65130	56.452	62	27	0	56	117	111	172	3.05e-19	84.0
MS.gene054480.t1	AT5G65130	56.452	62	27	0	56	117	113	174	3.30e-19	83.6
MS.gene054480.t1	AT1G75490	42.222	90	52	0	35	124	21	110	4.14e-19	82.0
MS.gene054480.t1	AT2G40340	35.714	140	81	3	34	171	57	189	6.29e-19	84.0
MS.gene054480.t1	AT2G40340	35.714	140	81	3	34	171	50	182	6.47e-19	84.0
MS.gene054480.t1	AT2G40340	38.710	124	67	3	34	155	50	166	6.85e-19	83.2
MS.gene054480.t1	AT2G40340	39.831	118	62	3	56	171	14	124	6.99e-19	82.8
MS.gene054480.t1	AT2G40340	39.831	118	62	3	56	171	14	124	6.99e-19	82.8
MS.gene054480.t1	AT2G40340	39.831	118	62	3	56	171	14	124	6.99e-19	82.8
MS.gene054480.t1	AT1G72360	58.621	58	24	0	56	113	25	82	8.62e-19	81.3
MS.gene054480.t1	AT5G43410	56.250	64	27	1	51	113	10	73	1.04e-18	79.0
MS.gene054480.t1	AT3G15210	50.704	71	35	0	46	116	15	85	1.48e-18	80.9
MS.gene054480.t1	AT1G72360	58.621	58	24	0	56	113	74	131	1.74e-18	81.6
MS.gene054480.t1	AT1G72360	58.621	58	24	0	56	113	76	133	1.79e-18	81.6
MS.gene054480.t1	AT5G51190	37.415	147	75	5	47	178	65	209	1.84e-18	80.5
MS.gene054480.t1	AT1G15360	61.404	57	22	0	56	112	7	63	1.95e-18	80.1
MS.gene054480.t1	AT1G15360	61.404	57	22	0	56	112	7	63	1.95e-18	80.1
MS.gene054480.t1	AT5G44210	53.425	73	29	1	52	124	29	96	1.06e-17	78.2
MS.gene054480.t1	AT4G11140	56.140	57	25	0	56	112	87	143	2.13e-17	79.0
MS.gene054480.t1	AT4G23750	43.158	95	42	1	29	111	83	177	2.16e-17	79.7
MS.gene054480.t1	AT4G23750	43.158	95	42	1	29	111	83	177	2.16e-17	79.7
MS.gene054480.t1	AT1G03800	53.226	62	29	0	51	112	48	109	2.36e-17	78.2
MS.gene054480.t1	AT2G46310	58.929	56	23	0	56	111	99	154	2.74e-17	78.6
MS.gene054480.t1	AT5G25190	63.158	57	21	0	56	112	8	64	2.97e-17	76.6
MS.gene054480.t1	AT5G47230	56.716	67	26	2	47	112	149	213	3.47e-17	78.6
MS.gene054480.t1	AT3G20310	56.452	62	27	0	51	112	22	83	3.64e-17	77.8
MS.gene054480.t1	AT4G27950	57.143	56	24	0	56	111	118	173	4.35e-17	78.6
MS.gene054480.t1	AT5G47220	54.545	66	29	1	48	112	109	174	4.50e-17	77.4
MS.gene054480.t1	AT5G07310	60.000	70	28	0	56	125	92	161	4.60e-17	77.8
MS.gene054480.t1	AT5G61600	62.069	58	21	1	56	112	88	145	4.98e-17	77.0
MS.gene054480.t1	AT2G44840	58.333	60	24	1	56	114	92	151	6.42e-17	76.6
MS.gene054480.t1	AT3G61630	42.308	104	50	2	35	134	80	177	9.08e-17	77.4
MS.gene054480.t1	AT1G28370	57.895	57	24	0	56	112	20	76	9.25e-17	74.7
MS.gene054480.t1	AT4G17490	58.621	58	23	1	56	112	137	194	1.26e-16	76.6
MS.gene054480.t1	AT5G25390	56.452	62	24	1	56	117	7	65	1.67e-16	74.7
MS.gene054480.t1	AT5G18450	57.895	57	24	0	55	111	33	89	1.71e-16	76.6
MS.gene054480.t1	AT2G31230	40.952	105	61	1	9	112	39	143	1.77e-16	75.9
MS.gene054480.t1	AT1G28370	57.895	57	24	0	56	112	58	114	1.93e-16	74.7
MS.gene054480.t1	AT5G53290	55.357	56	25	0	56	111	125	180	4.91e-16	75.9
MS.gene054480.t1	AT1G44830	55.422	83	29	2	56	130	35	117	6.08e-16	73.6
MS.gene054480.t1	AT2G40350	37.374	99	62	0	16	114	34	132	7.78e-16	72.4
MS.gene054480.t1	AT2G40350	37.374	99	62	0	16	114	27	125	8.78e-16	72.0
MS.gene054480.t1	AT5G64750	49.315	73	36	1	63	135	192	263	1.15e-15	75.1
MS.gene054480.t1	AT1G50640	56.140	57	25	0	56	112	28	84	1.59e-15	72.8
MS.gene054480.t1	AT4G17500	58.065	62	23	2	52	112	146	205	2.37e-15	73.2
MS.gene054480.t1	AT1G12890	48.571	70	36	0	42	111	7	76	4.49e-15	71.6
MS.gene054480.t1	AT1G12980	38.835	103	50	1	9	111	23	112	4.58e-15	72.8
MS.gene054480.t1	AT1G28360	55.172	58	26	0	56	113	12	69	5.47e-15	70.9
MS.gene054480.t1	AT5G13910	44.595	74	41	0	38	111	2	75	1.85e-14	69.7
MS.gene054480.t1	AT3G23240	55.172	58	25	1	55	111	81	138	1.91e-14	69.7
MS.gene054480.t1	AT2G40220	54.167	72	33	0	40	111	39	110	1.98e-14	71.2
MS.gene054480.t1	AT1G28160	48.571	70	34	1	56	125	39	106	3.40e-14	69.7
MS.gene054480.t1	AT1G24590	57.143	56	24	0	56	111	58	113	5.01e-14	69.7
MS.gene054480.t1	AT3G14230	44.860	107	49	2	9	112	80	179	5.51e-14	70.1
MS.gene054480.t1	AT5G11190	63.158	57	21	0	56	112	7	63	6.74e-14	67.8
MS.gene054480.t1	AT1G43160	52.632	76	36	0	37	112	42	117	7.40e-14	67.8
MS.gene054480.t1	AT4G34410	59.649	57	23	0	56	112	136	192	1.29e-13	68.2
MS.gene054480.t1	AT3G14230	44.444	108	49	2	9	112	80	180	1.59e-13	68.9
MS.gene054480.t1	AT5G50080	58.462	65	27	0	48	112	78	142	1.90e-13	67.4
MS.gene054480.t1	AT5G19790	46.667	75	37	1	39	113	8	79	2.00e-13	67.4
MS.gene054480.t1	AT5G50080	58.462	65	27	0	48	112	69	133	2.10e-13	67.0
MS.gene054480.t1	AT3G14230	51.807	83	33	1	30	112	109	184	4.09e-13	67.8
MS.gene054480.t1	AT5G18560	44.286	70	39	0	42	111	41	110	4.38e-13	67.4
MS.gene054480.t1	AT1G71130	50.746	67	28	1	56	117	79	145	4.93e-13	64.7
MS.gene054480.t1	AT1G53910	55.882	68	30	0	45	112	114	181	5.73e-13	67.0
MS.gene054480.t1	AT1G53910	55.882	68	30	0	45	112	114	181	5.73e-13	67.0
MS.gene054480.t1	AT1G53910	55.882	68	30	0	45	112	112	179	5.80e-13	67.0
MS.gene054480.t1	AT1G64380	61.905	63	24	0	52	114	132	194	9.59e-13	66.2
MS.gene054480.t1	AT1G22985	55.932	59	23	1	56	111	75	133	1.86e-12	63.2
MS.gene054480.t1	AT1G06160	61.017	59	22	1	55	112	81	139	2.36e-12	64.3
MS.gene054480.t1	AT5G61590	48.750	80	38	2	34	112	87	164	3.09e-12	63.5
MS.gene054480.t1	AT4G18450	55.172	58	24	2	56	111	110	167	3.12e-12	64.7
MS.gene054480.t1	AT3G23220	51.429	70	33	1	50	118	8	77	3.82e-12	62.0
MS.gene054480.t1	AT1G04370	59.322	59	23	1	56	113	20	78	4.49e-12	61.6
MS.gene054480.t1	AT1G68550	60.465	43	17	0	58	100	115	157	6.67e-12	63.9
MS.gene054480.t1	AT1G68550	60.465	43	17	0	58	100	115	157	6.67e-12	63.9
MS.gene054480.t1	AT2G38340	45.238	84	38	1	37	112	51	134	3.91e-11	60.8

Find 39 sgRNAs with CRISPR-Local

Find 55 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTACCTCAATTTCCCTAATT+TGG	0.114398	7.4:+56566916	MS.gene054480:CDS
CATATTCTTGACTTCTTTCT+TGG	0.172943	7.4:-56566815	None:intergenic
CATTGTGTTTGAGGAGATTA+AGG	0.244259	7.4:+56567009	MS.gene054480:CDS
GAATGAGAGCATGGGGAAAA+TGG	0.265814	7.4:+56566774	MS.gene054480:CDS
GTAAGCTGAATGACCCTTTA+TGG	0.286054	7.4:-56566897	None:intergenic
TTCTTTCTTATTCTTCTCCT+TGG	0.362316	7.4:+56567230	MS.gene054480:CDS
TGTAGCTGCTTTAGCCATAA+AGG	0.368505	7.4:+56566883	MS.gene054480:CDS
AGCAGCAGCCATTGTGTTTG+AGG	0.373794	7.4:+56567000	MS.gene054480:CDS
CATTTATGTGCTGTTGATAG+TGG	0.392057	7.4:+56567253	MS.gene054480:CDS
CAAGAAAGAAGTCAAGAATA+TGG	0.398612	7.4:+56566816	MS.gene054480:CDS
AATGAGAGCATGGGGAAAAT+GGG	0.409247	7.4:+56566775	MS.gene054480:CDS
AACATACCCTACAGCTGAAA+TGG	0.429274	7.4:+56566844	MS.gene054480:CDS
GGTGATGTGGTTGAAGGCCT+TGG	0.433512	7.4:-56566950	None:intergenic
GAGGTGTAAGAATGAGAGCA+TGG	0.447313	7.4:+56566765	MS.gene054480:CDS
ATTCTTACACCTCTATATGT+AGG	0.455195	7.4:-56566755	None:intergenic
GAGCCAAATTAGGGAAATTG+AGG	0.457793	7.4:-56566919	None:intergenic
TTGACTTCTTTCTTGGCTCA+CGG	0.467234	7.4:-56566808	None:intergenic
TTAGTAGTAGCAGTAGTAGA+TGG	0.471727	7.4:-56567145	None:intergenic
CTAGCTGCCATTTCAGCTGT+AGG	0.493049	7.4:-56566851	None:intergenic
GAATTTGAATTTGAAGATGT+TGG	0.496441	7.4:-56566644	None:intergenic
GTAGCTGCTTTAGCCATAAA+GGG	0.498726	7.4:+56566884	MS.gene054480:CDS
ACAAAACACCCTACATATAG+AGG	0.498954	7.4:+56566746	MS.gene054480:CDS
TCCTTAGGTGATGTGGTTGA+AGG	0.506971	7.4:-56566956	None:intergenic
TCGAGGAGCAACTGTCGTCA+TGG	0.509140	7.4:+56567284	MS.gene054480:CDS
AGGTGTAAGAATGAGAGCAT+GGG	0.522254	7.4:+56566766	MS.gene054480:CDS
TTCTTACACCTCTATATGTA+GGG	0.524031	7.4:-56566754	None:intergenic
GCTGCAACTTGAATGTCCTT+AGG	0.534176	7.4:-56566971	None:intergenic
TAGCTGCCATTTCAGCTGTA+GGG	0.540143	7.4:-56566850	None:intergenic
AAGAAGTCAAGAATATGGCT+TGG	0.541140	7.4:+56566821	MS.gene054480:CDS
CGAGGAGCAACTGTCGTCAT+GGG	0.545548	7.4:+56567285	MS.gene054480:CDS
GCCTTCAACCACATCACCTA+AGG	0.552699	7.4:+56566955	MS.gene054480:CDS
ATTTGGCTCAAAATCTTCCA+AGG	0.566107	7.4:+56566933	MS.gene054480:CDS
GGTGTAAGAATGAGAGCATG+GGG	0.581062	7.4:+56566767	MS.gene054480:CDS
TTGAATGTCCTTAGGTGATG+TGG	0.588981	7.4:-56566963	None:intergenic
GAGATTAAGGAATGTTGCCA+AGG	0.621726	7.4:+56567022	MS.gene054480:CDS
CTTAATCTCCTCAAACACAA+TGG	0.632567	7.4:-56567008	None:intergenic
TCAACAGCACATAAATGCCA+AGG	0.637379	7.4:-56567247	None:intergenic
TGATAGTGGACTTCGCCTCG+AGG	0.686693	7.4:+56567267	MS.gene054480:CDS
ATGACGACAGTTGCTCCTCG+AGG	0.708185	7.4:-56567282	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GATTTTTTATTTCCATTTTG+AGG	-	chr7.4:56566698-56566717	None:intergenic	20.0%
!	GAATTTGAATTTGAAGATGT+TGG	-	chr7.4:56566647-56566666	None:intergenic	25.0%
!!!	ACTATTTTTGGTTACTTGAT+TGG	-	chr7.4:56566675-56566694	None:intergenic	25.0%
	ACCAAAAATAGTCCTCAAAA+TGG	+	chr7.4:56566683-56566702	MS.gene054480:CDS	30.0%
	AGACTCTTGAACATTATCAA+TGG	-	chr7.4:56567113-56567132	None:intergenic	30.0%
	ATTCTTACACCTCTATATGT+AGG	-	chr7.4:56566758-56566777	None:intergenic	30.0%
	CAAGAAAGAAGTCAAGAATA+TGG	+	chr7.4:56566816-56566835	MS.gene054480:CDS	30.0%
	CATATTCTTGACTTCTTTCT+TGG	-	chr7.4:56566818-56566837	None:intergenic	30.0%
	TTACCTCAATTTCCCTAATT+TGG	+	chr7.4:56566916-56566935	MS.gene054480:CDS	30.0%
	TTCTTACACCTCTATATGTA+GGG	-	chr7.4:56566757-56566776	None:intergenic	30.0%
	TTCTTTCTTATTCTTCTCCT+TGG	+	chr7.4:56567230-56567249	MS.gene054480:CDS	30.0%
!	CTTTTTCCTGATGGAAAAAA+TGG	+	chr7.4:56567205-56567224	MS.gene054480:CDS	30.0%
!	GAAGATTTTGAGCCAAATTA+GGG	-	chr7.4:56566931-56566950	None:intergenic	30.0%
!	TTCATTTCTCTCTCTTTTCT+TGG	-	chr7.4:56566720-56566739	None:intergenic	30.0%
!!	TCCATTTTGAGGACTATTTT+TGG	-	chr7.4:56566687-56566706	None:intergenic	30.0%
!!!	AGAATTCCATTTTTTCCATC+AGG	-	chr7.4:56567214-56567233	None:intergenic	30.0%
!!!	ATTTTTGGTTACTTGATTGG+TGG	-	chr7.4:56566672-56566691	None:intergenic	30.0%
	AAGAAGTCAAGAATATGGCT+TGG	+	chr7.4:56566821-56566840	MS.gene054480:CDS	35.0%
	ACAAAACACCCTACATATAG+AGG	+	chr7.4:56566746-56566765	MS.gene054480:CDS	35.0%
	CATTGTGTTTGAGGAGATTA+AGG	+	chr7.4:56567009-56567028	MS.gene054480:CDS	35.0%
	CTTAATCTCCTCAAACACAA+TGG	-	chr7.4:56567011-56567030	None:intergenic	35.0%
	CTTGATCTTGATCTTGATCT+TGG	-	chr7.4:56567069-56567088	None:intergenic	35.0%
	TTAGTAGTAGCAGTAGTAGA+TGG	-	chr7.4:56567148-56567167	None:intergenic	35.0%
	TTTCCATCAGGAAAAAGATC+TGG	-	chr7.4:56567202-56567221	None:intergenic	35.0%
!	ATTTGGCTCAAAATCTTCCA+AGG	+	chr7.4:56566933-56566952	MS.gene054480:CDS	35.0%
!	CATTTATGTGCTGTTGATAG+TGG	+	chr7.4:56567253-56567272	MS.gene054480:CDS	35.0%
!	GGAAGATTTTGAGCCAAATT+AGG	-	chr7.4:56566932-56566951	None:intergenic	35.0%
!!!	CTTGATCTTGGTTTTGTTGT+TGG	-	chr7.4:56567057-56567076	None:intergenic	35.0%
	AACATACCCTACAGCTGAAA+TGG	+	chr7.4:56566844-56566863	MS.gene054480:CDS	40.0%
	GAGATTAAGGAATGTTGCCA+AGG	+	chr7.4:56567022-56567041	MS.gene054480:CDS	40.0%
	GAGCCAAATTAGGGAAATTG+AGG	-	chr7.4:56566922-56566941	None:intergenic	40.0%
	GTAAGCTGAATGACCCTTTA+TGG	-	chr7.4:56566900-56566919	None:intergenic	40.0%
	TCAACAGCACATAAATGCCA+AGG	-	chr7.4:56567250-56567269	None:intergenic	40.0%
	TTGAATGTCCTTAGGTGATG+TGG	-	chr7.4:56566966-56566985	None:intergenic	40.0%
	TTGACTTCTTTCTTGGCTCA+CGG	-	chr7.4:56566811-56566830	None:intergenic	40.0%
!	AATGAGAGCATGGGGAAAAT+GGG	+	chr7.4:56566775-56566794	MS.gene054480:CDS	40.0%
!	AGGTGTAAGAATGAGAGCAT+GGG	+	chr7.4:56566766-56566785	MS.gene054480:CDS	40.0%
!	GTAGCTGCTTTAGCCATAAA+GGG	+	chr7.4:56566884-56566903	MS.gene054480:CDS	40.0%
!	TGTAGCTGCTTTAGCCATAA+AGG	+	chr7.4:56566883-56566902	MS.gene054480:CDS	40.0%
!!	GTTGTTGGTCATTTTCACCT+TGG	-	chr7.4:56567042-56567061	None:intergenic	40.0%
	GAGGTGTAAGAATGAGAGCA+TGG	+	chr7.4:56566765-56566784	MS.gene054480:CDS	45.0%
	GCTGCAACTTGAATGTCCTT+AGG	-	chr7.4:56566974-56566993	None:intergenic	45.0%
	TCCTTAGGTGATGTGGTTGA+AGG	-	chr7.4:56566959-56566978	None:intergenic	45.0%
!	CTGCCAGATCTTTTTCCTGA+TGG	+	chr7.4:56567196-56567215	MS.gene054480:CDS	45.0%
!	GAATGAGAGCATGGGGAAAA+TGG	+	chr7.4:56566774-56566793	MS.gene054480:CDS	45.0%
!	GGTGTAAGAATGAGAGCATG+GGG	+	chr7.4:56566767-56566786	MS.gene054480:CDS	45.0%
!	TAGCTGCCATTTCAGCTGTA+GGG	-	chr7.4:56566853-56566872	None:intergenic	45.0%
	AGCAGCAGCCATTGTGTTTG+AGG	+	chr7.4:56567000-56567019	MS.gene054480:CDS	50.0%
	GCCTTCAACCACATCACCTA+AGG	+	chr7.4:56566955-56566974	MS.gene054480:CDS	50.0%
!	CTAGCTGCCATTTCAGCTGT+AGG	-	chr7.4:56566854-56566873	None:intergenic	50.0%
	ATGACGACAGTTGCTCCTCG+AGG	-	chr7.4:56567285-56567304	None:intergenic	55.0%
	CGAGGAGCAACTGTCGTCAT+GGG	+	chr7.4:56567285-56567304	MS.gene054480:CDS	55.0%
	GGTGATGTGGTTGAAGGCCT+TGG	-	chr7.4:56566953-56566972	None:intergenic	55.0%
	TCGAGGAGCAACTGTCGTCA+TGG	+	chr7.4:56567284-56567303	MS.gene054480:CDS	55.0%
!!	TGATAGTGGACTTCGCCTCG+AGG	+	chr7.4:56567267-56567286	MS.gene054480:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	56566596	56567318	56566596	ID=MS.gene054480
chr7.4	mRNA	56566596	56567318	56566596	ID=MS.gene054480.t1;Parent=MS.gene054480
chr7.4	exon	56566596	56567043	56566596	ID=MS.gene054480.t1.exon1;Parent=MS.gene054480.t1
chr7.4	CDS	56566596	56567043	56566596	ID=cds.MS.gene054480.t1;Parent=MS.gene054480.t1
chr7.4	exon	56567128	56567318	56567128	ID=MS.gene054480.t1.exon2;Parent=MS.gene054480.t1
chr7.4	CDS	56567128	56567318	56567128	ID=cds.MS.gene054480.t1;Parent=MS.gene054480.t1

Gene Sequence

>MS.gene054480

ATGGAAAATGATGCTAATGAAAACTTCTTTAGCACATCATCATCAACACCAACATCTTCAAATTCAAATTCATCCACCAATCAAGTAACCAAAAATAGTCCTCAAAATGGAAATAAAAAATCCAAGAAAAGAGAGAGAAATGAAAATGACACAAAACACCCTACATATAGAGGTGTAAGAATGAGAGCATGGGGAAAATGGGTATCTGAAATCCGTGAGCCAAGAAAGAAGTCAAGAATATGGCTTGGAACATACCCTACAGCTGAAATGGCAGCTAGAGCTCATGATGTAGCTGCTTTAGCCATAAAGGGTCATTCAGCTTACCTCAATTTCCCTAATTTGGCTCAAAATCTTCCAAGGCCTTCAACCACATCACCTAAGGACATTCAAGTTGCAGCTGCAAAAGCAGCAGCCATTGTGTTTGAGGAGATTAAGGAATGTTGCCAAGGTGAAAATGACCAACAACAAAACCAAGATCAAGATCAAGATCAAGTTTCATTTTCAAATCTTTCTTCCATTGATAATGTTCAAGAGTCTAATTCAAGTTCTCCATCTACTACTGCTACTACTAATGATGATATTGATGACACACTCTTTGATCTGCCAGATCTTTTTCCTGATGGAAAAAATGGAATTCTTTCTTATTCTTCTCCTTGGCATTTATGTGCTGTTGATAGTGGACTTCGCCTCGAGGAGCAACTGTCGTCATGGGAGTATTACTAG

Protein sequence

>MS.gene054480.t1

MENDANENFFSTSSSTPTSSNSNSSTNQVTKNSPQNGNKKSKKRERNENDTKHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAQNLPRPSTTSPKDIQVAAAKAAAIVFEEIKECCQESNSSSPSTTATTNDDIDDTLFDLPDLFPDGKNGILSYSSPWHLCAVDSGLRLEEQLSSWEYY