Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45624.t1 | XP_003608579.1 | 98.9 | 91 | 1 | 0 | 1 | 91 | 1 | 91 | 3.50E-41 | 180.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45624.t1 | G7JFA7 | 98.9 | 91 | 1 | 0 | 1 | 91 | 1 | 91 | 2.5e-41 | 180.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene45624 | 0.899591 | 1.70E-77 | -1.69E-46 |
| MS.gene049159 | MS.gene45624 | 0.82782 | 1.27E-54 | -1.69E-46 |
| MS.gene049178 | MS.gene45624 | 0.824553 | 7.58E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene45624 | 0.834607 | 2.72E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene45624 | 0.828426 | 9.05E-55 | -1.69E-46 |
| MS.gene049501 | MS.gene45624 | 0.825392 | 4.81E-54 | -1.69E-46 |
| MS.gene049647 | MS.gene45624 | 0.808044 | 3.76E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene45624 | 0.807267 | 5.50E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene45624 | 0.847162 | 1.38E-59 | -1.69E-46 |
| MS.gene049807 | MS.gene45624 | 0.822105 | 2.83E-53 | -1.69E-46 |
| MS.gene049887 | MS.gene45624 | 0.85564 | 5.51E-62 | -1.69E-46 |
| MS.gene049983 | MS.gene45624 | 0.819245 | 1.29E-52 | -1.69E-46 |
| MS.gene050213 | MS.gene45624 | 0.810665 | 1.03E-50 | -1.69E-46 |
| MS.gene050224 | MS.gene45624 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene050439 | MS.gene45624 | 0.817082 | 3.97E-52 | -1.69E-46 |
| MS.gene050551 | MS.gene45624 | 0.833458 | 5.27E-56 | -1.69E-46 |
| MS.gene050556 | MS.gene45624 | 0.819006 | 1.46E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene45624 | 0.839376 | 1.64E-57 | -1.69E-46 |
| MS.gene050657 | MS.gene45624 | 0.842389 | 2.66E-58 | -1.69E-46 |
| MS.gene050737 | MS.gene45624 | 0.824637 | 7.25E-54 | -1.69E-46 |
| MS.gene050826 | MS.gene45624 | 0.829736 | 4.36E-55 | -1.69E-46 |
| MS.gene050838 | MS.gene45624 | 0.813666 | 2.28E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene45624 | 0.837824 | 4.14E-57 | -1.69E-46 |
| MS.gene051003 | MS.gene45624 | 0.812301 | 4.54E-51 | -1.69E-46 |
| MS.gene051029 | MS.gene45624 | 0.801237 | 9.90E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene45624 | 0.835366 | 1.75E-56 | -1.69E-46 |
| MS.gene051198 | MS.gene45624 | 0.81926 | 1.27E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene45624 | 0.80761 | 4.65E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene45624 | 0.817115 | 3.90E-52 | -1.69E-46 |
| MS.gene051388 | MS.gene45624 | 0.824092 | 9.74E-54 | -1.69E-46 |
| MS.gene051490 | MS.gene45624 | 0.815968 | 7.04E-52 | -1.69E-46 |
| MS.gene05150 | MS.gene45624 | 0.801269 | 9.75E-49 | -1.69E-46 |
| MS.gene05155 | MS.gene45624 | 0.801235 | 9.91E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene45624 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene45624 | 0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene45624 | 0.821688 | 3.54E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene45624 | 0.821284 | 4.38E-53 | -1.69E-46 |
| MS.gene051800 | MS.gene45624 | 0.808866 | 2.51E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene45624 | 0.832755 | 7.89E-56 | -1.69E-46 |
| MS.gene052016 | MS.gene45624 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene45624 | 0.86895 | 4.46E-66 | -1.69E-46 |
| MS.gene052311 | MS.gene45624 | 0.818722 | 1.69E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene45624 | 0.81347 | 2.52E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene45624 | 0.803173 | 3.96E-49 | -1.69E-46 |
| MS.gene052459 | MS.gene45624 | 0.802355 | 5.84E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene45624 | 0.848147 | 7.38E-60 | -1.69E-46 |
| MS.gene052516 | MS.gene45624 | 0.853643 | 2.09E-61 | -1.69E-46 |
| MS.gene052518 | MS.gene45624 | 0.802371 | 5.79E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene45624 | 0.863724 | 2.03E-64 | -1.69E-46 |
| MS.gene052665 | MS.gene45624 | 0.813456 | 2.54E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene45624 | 0.816032 | 6.82E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene45624 | 0.828327 | 9.56E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene45624 | 0.833102 | 6.47E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene45624 | 0.853831 | 1.84E-61 | -1.69E-46 |
| MS.gene053143 | MS.gene45624 | 0.831336 | 1.77E-55 | -1.69E-46 |
| MS.gene053144 | MS.gene45624 | 0.867093 | 1.76E-65 | -1.69E-46 |
| MS.gene053164 | MS.gene45624 | 0.839624 | 1.42E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene45624 | 0.819015 | 1.45E-52 | -1.69E-46 |
| MS.gene053381 | MS.gene45624 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene053581 | MS.gene45624 | 0.816454 | 5.48E-52 | -1.69E-46 |
| MS.gene053621 | MS.gene45624 | 0.80004 | 1.74E-48 | -1.69E-46 |
| MS.gene053786 | MS.gene45624 | 0.800616 | 1.33E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene45624 | 0.807592 | 4.69E-50 | -1.69E-46 |
| MS.gene054480 | MS.gene45624 | 0.80509 | 1.58E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene45624 | 0.819337 | 1.22E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene45624 | 0.854222 | 1.42E-61 | -1.69E-46 |
| MS.gene05458 | MS.gene45624 | 0.83397 | 3.93E-56 | -1.69E-46 |
| MS.gene05468 | MS.gene45624 | 0.817538 | 3.13E-52 | -1.69E-46 |
| MS.gene054823 | MS.gene45624 | 0.807676 | 4.50E-50 | -1.69E-46 |
| MS.gene054824 | MS.gene45624 | 0.839781 | 1.29E-57 | -1.69E-46 |
| MS.gene054943 | MS.gene45624 | 0.836293 | 1.02E-56 | -1.69E-46 |
| MS.gene055310 | MS.gene45624 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene055311 | MS.gene45624 | 0.822747 | 2.01E-53 | -1.69E-46 |
| MS.gene055313 | MS.gene45624 | 0.844505 | 7.25E-59 | -1.69E-46 |
| MS.gene055314 | MS.gene45624 | 0.811604 | 6.44E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene45624 | 0.842587 | 2.36E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene45624 | 0.834867 | 2.34E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene45624 | 0.842226 | 2.94E-58 | -1.69E-46 |
| MS.gene055469 | MS.gene45624 | 0.859837 | 3.14E-63 | -1.69E-46 |
| MS.gene055513 | MS.gene45624 | 0.895683 | 7.59E-76 | -1.69E-46 |
| MS.gene055537 | MS.gene45624 | 0.80399 | 2.68E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene45624 | -0.815877 | 7.38E-52 | -1.69E-46 |
| MS.gene055864 | MS.gene45624 | 0.827322 | 1.67E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene45624 | 0.846984 | 1.54E-59 | -1.69E-46 |
| MS.gene056043 | MS.gene45624 | -0.82004 | 8.46E-53 | -1.69E-46 |
| MS.gene056045 | MS.gene45624 | 0.811683 | 6.19E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene45624 | 0.86152 | 9.68E-64 | -1.69E-46 |
| MS.gene056308 | MS.gene45624 | 0.87018 | 1.77E-66 | -1.69E-46 |
| MS.gene056390 | MS.gene45624 | 0.826902 | 2.10E-54 | -1.69E-46 |
| MS.gene056507 | MS.gene45624 | 0.834346 | 3.16E-56 | -1.69E-46 |
| MS.gene056538 | MS.gene45624 | 0.806496 | 8.00E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene45624 | 0.815209 | 1.04E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene45624 | 0.824379 | 8.33E-54 | -1.69E-46 |
| MS.gene056831 | MS.gene45624 | 0.84 | 1.13E-57 | -1.69E-46 |
| MS.gene057034 | MS.gene45624 | 0.831597 | 1.53E-55 | -1.69E-46 |
| MS.gene057294 | MS.gene45624 | 0.805988 | 1.02E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene45624 | 0.823488 | 1.35E-53 | -1.69E-46 |
| MS.gene057446 | MS.gene45624 | 0.806445 | 8.20E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene45624 | 0.835631 | 1.50E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene45624 | 0.817085 | 3.96E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene45624 | 0.805098 | 1.57E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene45624 | 0.810867 | 9.31E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene45624 | 0.821632 | 3.64E-53 | -1.69E-46 |
| MS.gene058360 | MS.gene45624 | 0.810048 | 1.40E-50 | -1.69E-46 |
| MS.gene058543 | MS.gene45624 | 0.814121 | 1.81E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene45624 | 0.800997 | 1.11E-48 | -1.69E-46 |
| MS.gene058636 | MS.gene45624 | 0.811307 | 7.48E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene45624 | 0.831282 | 1.82E-55 | -1.69E-46 |
| MS.gene058639 | MS.gene45624 | 0.844245 | 8.52E-59 | -1.69E-46 |
| MS.gene058646 | MS.gene45624 | 0.805163 | 1.52E-49 | -1.69E-46 |
| MS.gene058647 | MS.gene45624 | 0.810996 | 8.73E-51 | -1.69E-46 |
| MS.gene058649 | MS.gene45624 | 0.840971 | 6.30E-58 | -1.69E-46 |
| MS.gene058668 | MS.gene45624 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene058681 | MS.gene45624 | 0.804534 | 2.06E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene45624 | 0.82291 | 1.84E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene45624 | 0.830612 | 2.66E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene45624 | 0.841734 | 3.97E-58 | -1.69E-46 |
| MS.gene059171 | MS.gene45624 | 0.816554 | 5.21E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene45624 | 0.820653 | 6.12E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene45624 | 0.840355 | 9.14E-58 | -1.69E-46 |
| MS.gene059570 | MS.gene45624 | 0.880114 | 7.17E-70 | -1.69E-46 |
| MS.gene059625 | MS.gene45624 | 0.802947 | 4.40E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene45624 | 0.820723 | 5.90E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene45624 | 0.835654 | 1.48E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene45624 | 0.82335 | 1.45E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene45624 | 0.825787 | 3.88E-54 | -1.69E-46 |
| MS.gene06010 | MS.gene45624 | 0.803609 | 3.21E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene45624 | 0.83306 | 6.62E-56 | -1.69E-46 |
| MS.gene060380 | MS.gene45624 | 0.822791 | 1.96E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene45624 | 0.840883 | 6.65E-58 | -1.69E-46 |
| MS.gene060637 | MS.gene45624 | 0.861503 | 9.80E-64 | -1.69E-46 |
| MS.gene060777 | MS.gene45624 | 0.821532 | 3.84E-53 | -1.69E-46 |
| MS.gene060869 | MS.gene45624 | 0.805595 | 1.24E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene45624 | 0.829252 | 5.71E-55 | -1.69E-46 |
| MS.gene060932 | MS.gene45624 | 0.850327 | 1.82E-60 | -1.69E-46 |
| MS.gene061006 | MS.gene45624 | 0.843433 | 1.41E-58 | -1.69E-46 |
| MS.gene061100 | MS.gene45624 | 0.867417 | 1.39E-65 | -1.69E-46 |
| MS.gene06121 | MS.gene45624 | 0.806337 | 8.64E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45624.t1 | MTR_4g097790 | 88.791 | 794 | 53 | 5 | 1 | 769 | 1 | 783 | 0.0 | 1139 |
| MS.gene45624.t1 | MTR_5g005430 | 44.156 | 77 | 31 | 3 | 1 | 68 | 1 | 74 | 2.53e-14 | 77.0 |
| MS.gene45624.t1 | MTR_1g105890 | 35.025 | 197 | 97 | 8 | 1 | 185 | 1 | 178 | 4.34e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45624.t1 | AT4G33740 | 51.429 | 70 | 25 | 2 | 8 | 68 | 7 | 76 | 1.71e-17 | 86.7 |
| MS.gene45624.t1 | AT4G33740 | 51.429 | 70 | 25 | 2 | 8 | 68 | 7 | 76 | 1.71e-17 | 86.7 |
| MS.gene45624.t1 | AT4G33740 | 51.429 | 70 | 25 | 2 | 8 | 68 | 7 | 76 | 1.71e-17 | 86.7 |
| MS.gene45624.t1 | AT4G33740 | 51.429 | 70 | 25 | 2 | 8 | 68 | 7 | 76 | 1.71e-17 | 86.7 |
| MS.gene45624.t1 | AT4G33740 | 51.429 | 70 | 25 | 2 | 8 | 68 | 7 | 76 | 1.71e-17 | 86.7 |
| MS.gene45624.t1 | AT2G22795 | 34.091 | 132 | 38 | 3 | 1 | 128 | 1 | 87 | 3.51e-16 | 83.2 |
Find 131 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTTCTTTGAGTCATTC+TGG | 0.163643 | 8.4:+24746162 | None:intergenic |
| TTTCCTCCACATGAGGTTTA+AGG | 0.231421 | 8.4:+24747953 | None:intergenic |
| GTTTGGTTAGTTTATCAAAT+TGG | 0.237146 | 8.4:-24748054 | MS.gene45624:CDS |
| GCATGACGAGCAAACAAAAT+TGG | 0.258368 | 8.4:-24747869 | MS.gene45624:CDS |
| TAAAGAATCTCGTGTAGATT+TGG | 0.278934 | 8.4:-24745919 | MS.gene45624:CDS |
| GAGGAGAATTAGGCATGTTT+AGG | 0.292908 | 8.4:-24748161 | None:intergenic |
| GGCAATGAAGTTGTTAAGTT+AGG | 0.297885 | 8.4:-24747985 | MS.gene45624:CDS |
| CTCTCCTCCTTCTGTTCCAT+TGG | 0.306465 | 8.4:+24747150 | None:intergenic |
| AGAAGAACAATTTGACAAAA+AGG | 0.307480 | 8.4:-24746972 | MS.gene45624:CDS |
| GATTTAGAATCTTCATTGTT+TGG | 0.315496 | 8.4:+24746638 | None:intergenic |
| AGAGAATGAGGAAATCAAAA+AGG | 0.319492 | 8.4:-24747674 | MS.gene45624:CDS |
| CCTTCGCATCACTACCATTC+TGG | 0.322961 | 8.4:+24747224 | None:intergenic |
| CTCTACACTTTCCCTCTCCT+TGG | 0.335719 | 8.4:+24747699 | None:intergenic |
| ACAAAATTGGATGATGTTAA+TGG | 0.336252 | 8.4:-24747856 | MS.gene45624:CDS |
| CCATTCTGCGATGATGTATT+CGG | 0.342453 | 8.4:+24746743 | None:intergenic |
| CTTAGATCTTTGACTCCTCC+TGG | 0.358867 | 8.4:+24748131 | None:intergenic |
| AGAAGGGCATGATAAGATTC+AGG | 0.361284 | 8.4:-24747125 | MS.gene45624:CDS |
| TGAATCAGTGGAGTCGAAAA+AGG | 0.361299 | 8.4:-24746030 | MS.gene45624:CDS |
| GAAAACCCGGAAAAGAATTC+TGG | 0.364276 | 8.4:-24746515 | MS.gene45624:CDS |
| CCCGAGTTTGCATTGTCATT+CGG | 0.373470 | 8.4:+24746338 | None:intergenic |
| AATGAAGAGAACAAAGAAAC+TGG | 0.374256 | 8.4:-24747598 | MS.gene45624:CDS |
| GAAGTAGAGGACACAGAAAC+TGG | 0.375669 | 8.4:-24747652 | MS.gene45624:CDS |
| AAAGAATCTCGTGTAGATTT+GGG | 0.384407 | 8.4:-24745918 | MS.gene45624:CDS |
| TTCTTGTTGGTGTTTGTGTT+TGG | 0.390640 | 8.4:-24748071 | MS.gene45624:CDS |
| CTTGTTTACTATCTTGCTCA+TGG | 0.391649 | 8.4:+24747185 | None:intergenic |
| ACTTCCTTGATCATTCGAAT+TGG | 0.392875 | 8.4:+24745968 | None:intergenic |
| TTCATCTGATAATCAGGTTC+AGG | 0.393266 | 8.4:-24747095 | MS.gene45624:CDS |
| CCTTCTCACTCTCACTTCCT+TGG | 0.393945 | 8.4:+24746873 | None:intergenic |
| TGGCTTTCTCCGTTGCTGTC+TGG | 0.398238 | 8.4:+24745888 | None:intergenic |
| CTACAAATATGTGTTCTTGT+TGG | 0.398603 | 8.4:-24748084 | MS.gene45624:CDS |
| AGAGACTTCATCTGATAATC+AGG | 0.414886 | 8.4:-24747101 | MS.gene45624:CDS |
| GTCATTAGCACTTTCATCAC+TGG | 0.424247 | 8.4:+24746301 | None:intergenic |
| ATCAGATGTTGCTGGAGATC+AGG | 0.424407 | 8.4:-24746618 | MS.gene45624:CDS |
| AGAAGTGTTTCCGCTGTCAT+TGG | 0.432416 | 8.4:+24746133 | None:intergenic |
| CGGAGTTTGTACATCATCCT+TGG | 0.439676 | 8.4:+24746763 | None:intergenic |
| GCTAGGGAGGAAAATTATTC+CGG | 0.440944 | 8.4:-24747052 | MS.gene45624:CDS |
| AAGATCTAAGAACGGCTTCA+AGG | 0.444974 | 8.4:-24748118 | MS.gene45624:CDS |
| TTCTGAGCATAAAGAGGATT+CGG | 0.445078 | 8.4:-24747821 | MS.gene45624:CDS |
| GCAATGAAGTTGTTAAGTTA+GGG | 0.446418 | 8.4:-24747984 | MS.gene45624:CDS |
| TCCTTGGCTGTTTCGTGTGA+CGG | 0.462243 | 8.4:+24746889 | None:intergenic |
| CAAGATGGCAATACAAATCA+TGG | 0.470308 | 8.4:-24746560 | MS.gene45624:CDS |
| GAGAATGAAAAGATCAAAGA+TGG | 0.475291 | 8.4:-24747391 | MS.gene45624:CDS |
| GATTCTAAATCAGATGTTGC+TGG | 0.478943 | 8.4:-24746626 | MS.gene45624:CDS |
| GAGAATGAAGAGAACAAAGA+TGG | 0.485331 | 8.4:-24747469 | MS.gene45624:CDS |
| GAGAATGAAGAGAACAAAGA+TGG | 0.485331 | 8.4:-24747508 | MS.gene45624:CDS |
| AAGTGAGAGTGAGAAGGATC+AGG | 0.486082 | 8.4:-24746867 | MS.gene45624:CDS |
| ATCTTTGTTGTCAAATGTGT+TGG | 0.490461 | 8.4:+24746460 | None:intergenic |
| ACCGAATGACAATGCAAACT+CGG | 0.494622 | 8.4:-24746339 | MS.gene45624:CDS |
| CCGAATACATCATCGCAGAA+TGG | 0.499005 | 8.4:-24746743 | MS.gene45624:CDS |
| GACGAATCTGCTCACAAAGA+TGG | 0.500432 | 8.4:-24746002 | MS.gene45624:CDS |
| TTAGATCTTTGACTCCTCCT+GGG | 0.501240 | 8.4:+24748132 | None:intergenic |
| CGAATACATCATCGCAGAAT+GGG | 0.506493 | 8.4:-24746742 | MS.gene45624:CDS |
| AAGTGTAGAGAAAGAGAATG+AGG | 0.515167 | 8.4:-24747686 | MS.gene45624:CDS |
| TGAGACAAAGAGTAACGATA+AGG | 0.520367 | 8.4:-24747263 | MS.gene45624:CDS |
| AGATGCAAACTCAAAGAAAG+AGG | 0.524658 | 8.4:-24746684 | MS.gene45624:CDS |
| AATTCCAATTCGAATGATCA+AGG | 0.525233 | 8.4:-24745972 | MS.gene45624:CDS |
| TTCTGAGGAAGATGTAGTAG+TGG | 0.531925 | 8.4:+24746586 | None:intergenic |
| ACAGAAGGAGGAGAGAAAGA+AGG | 0.532633 | 8.4:-24747142 | MS.gene45624:CDS |
| TAATGCCTCCAGTGCTGTAG+TGG | 0.536214 | 8.4:-24747026 | MS.gene45624:CDS |
| ATGAAGTTGTTAAGTTAGGG+AGG | 0.537095 | 8.4:-24747981 | MS.gene45624:CDS |
| TTTGTTATCCACTACAGCAC+TGG | 0.540846 | 8.4:+24747018 | None:intergenic |
| AGCACTGGAGGCATTATCTC+CGG | 0.541329 | 8.4:+24747033 | None:intergenic |
| AGTTGTTAAGTTAGGGAGGA+AGG | 0.542263 | 8.4:-24747977 | MS.gene45624:CDS |
| TCAAAATGCTAAGACTGACT+TGG | 0.542530 | 8.4:-24747773 | MS.gene45624:CDS |
| CAGAAGGAGGAGAGAAAGAA+GGG | 0.549074 | 8.4:-24747141 | MS.gene45624:CDS |
| CATGAGCAAGATAGTAAACA+AGG | 0.550003 | 8.4:-24747184 | MS.gene45624:CDS |
| CAAGGGACGGCGGAGACCAA+TGG | 0.550548 | 8.4:-24747166 | MS.gene45624:CDS |
| TCATCTGAAAACAGTGCAGA+GGG | 0.551686 | 8.4:-24746251 | MS.gene45624:CDS |
| TGAGGAAGATGTAGTAGTGG+TGG | 0.552598 | 8.4:+24746589 | None:intergenic |
| GTGAAAAGAACAATGAGGCT+AGG | 0.556837 | 8.4:-24747069 | MS.gene45624:CDS |
| GACAGAAAATGATTCACAGA+AGG | 0.558166 | 8.4:-24746840 | MS.gene45624:CDS |
| ACAGAAAACAACAGTGCAGA+GGG | 0.563947 | 8.4:-24746218 | MS.gene45624:CDS |
| GAAAAGAATTCTGGTCAAGA+AGG | 0.566269 | 8.4:-24746506 | MS.gene45624:CDS |
| TACAAATCATGGTGAATACA+AGG | 0.567359 | 8.4:-24746549 | MS.gene45624:CDS |
| GCATGTTTAGGTTATCTCCC+AGG | 0.568543 | 8.4:-24748149 | MS.gene45624:CDS |
| GCGGAGACCAATGGAACAGA+AGG | 0.571738 | 8.4:-24747157 | MS.gene45624:CDS |
| TTCTGATACATCAGTCACTC+AGG | 0.572160 | 8.4:-24745946 | MS.gene45624:CDS |
| AGAATTACTTTCTGCACTCG+AGG | 0.576669 | 8.4:+24746370 | None:intergenic |
| CAGAAGAAACATCATTGTGA+TGG | 0.579215 | 8.4:+24745868 | None:intergenic |
| CCAGAATGGTAGTGATGCGA+AGG | 0.580966 | 8.4:-24747224 | MS.gene45624:CDS |
| TGAAAAGAACAATGAGGCTA+GGG | 0.583974 | 8.4:-24747068 | MS.gene45624:CDS |
| GAGACCAATGGAACAGAAGG+AGG | 0.585754 | 8.4:-24747154 | MS.gene45624:CDS |
| TGACAACAAAGATTCTAGCC+AGG | 0.586204 | 8.4:-24746282 | MS.gene45624:CDS |
| AGATAATTCTGAGCATAAAG+AGG | 0.586342 | 8.4:-24747827 | MS.gene45624:CDS |
| ATTGCCATCTTGAGTTTCTG+AGG | 0.586725 | 8.4:+24746571 | None:intergenic |
| GTTCTGATTCTCATTCACAT+TGG | 0.587926 | 8.4:+24746103 | None:intergenic |
| GAATGACAATGCAGAGACCA+AGG | 0.588611 | 8.4:-24747716 | MS.gene45624:CDS |
| ACAGAAGTTTCCTCCACATG+AGG | 0.598636 | 8.4:+24747946 | None:intergenic |
| TACTACCTCTGATACCTCAT+CGG | 0.598827 | 8.4:-24746411 | MS.gene45624:CDS |
| ACCAAGACTAGTGAAAATGA+AGG | 0.600742 | 8.4:-24746065 | MS.gene45624:CDS |
| CCAAGGAAGTGAGAGTGAGA+AGG | 0.602518 | 8.4:-24746873 | MS.gene45624:CDS |
| AATGAAGAAAGCAACCAGAA+TGG | 0.603174 | 8.4:-24747238 | MS.gene45624:CDS |
| GAAGGACCTTAAACCTCATG+TGG | 0.607015 | 8.4:-24747959 | MS.gene45624:CDS |
| GGAACTTTGCCAGACAGCAA+CGG | 0.607653 | 8.4:-24745897 | MS.gene45624:CDS |
| AATGCTAAGACTGACTTGGA+AGG | 0.608284 | 8.4:-24747769 | MS.gene45624:CDS |
| GTTATCCACTACAGCACTGG+AGG | 0.610249 | 8.4:+24747021 | None:intergenic |
| TTGTTCCGATGAGGTATCAG+AGG | 0.610717 | 8.4:+24746406 | None:intergenic |
| ACAGAAAATGATTCACAGAA+GGG | 0.613293 | 8.4:-24746839 | MS.gene45624:CDS |
| CAAGAAGGAACACAAGAAAG+TGG | 0.614187 | 8.4:-24746491 | MS.gene45624:CDS |
| TCTTCCTCAGAAACTCAAGA+TGG | 0.618250 | 8.4:-24746575 | MS.gene45624:CDS |
| CCGAATGACAATGCAAACTC+GGG | 0.619630 | 8.4:-24746338 | MS.gene45624:CDS |
| CACAGAAAACAACAGTGCAG+AGG | 0.623521 | 8.4:-24746219 | MS.gene45624:CDS |
| TGATGCTCAAAATGAATCAG+TGG | 0.624955 | 8.4:-24746042 | MS.gene45624:CDS |
| ACCGTCACACGAAACAGCCA+AGG | 0.625338 | 8.4:-24746890 | MS.gene45624:CDS |
| ATTGGATGATGTTAATGGTG+TGG | 0.625827 | 8.4:-24747851 | MS.gene45624:CDS |
| GCAAGATAGTAAACAAGGGA+CGG | 0.627652 | 8.4:-24747179 | MS.gene45624:CDS |
| CAATGCAGAGACCAAGGAGA+GGG | 0.630030 | 8.4:-24747710 | MS.gene45624:CDS |
| TTCATCTGAAAACAGTGCAG+AGG | 0.631596 | 8.4:-24746252 | MS.gene45624:CDS |
| GGACACCACTAATGAAAACC+CGG | 0.633456 | 8.4:-24746528 | MS.gene45624:CDS |
| AAAGAACAATGAGGCTAGGG+AGG | 0.643597 | 8.4:-24747065 | MS.gene45624:CDS |
| AGAAACTGGAGAAAGTAATG+AGG | 0.649473 | 8.4:-24747638 | MS.gene45624:CDS |
| TCTGATAATCAGGTTCAGGA+TGG | 0.650784 | 8.4:-24747091 | MS.gene45624:CDS |
| TGTTATAGATGCAAGACACA+AGG | 0.650888 | 8.4:-24747926 | MS.gene45624:CDS |
| TCGTGTGACGGTAGAAACAG+TGG | 0.651794 | 8.4:+24746901 | None:intergenic |
| TTTCAGATGAAGTAGTGACC+TGG | 0.653028 | 8.4:+24746264 | None:intergenic |
| TGCAAGACACAAGGAAGACG+AGG | 0.658957 | 8.4:-24747917 | MS.gene45624:CDS |
| GGACCTTAAACCTCATGTGG+AGG | 0.664100 | 8.4:-24747956 | MS.gene45624:CDS |
| AGGAGTCAAAGATCTAAGAA+CGG | 0.671099 | 8.4:-24748126 | MS.gene45624:CDS |
| ACAATGCAGAGACCAAGGAG+AGG | 0.673196 | 8.4:-24747711 | MS.gene45624:CDS |
| TAGTGATGCGAAGGATCAAG+CGG | 0.673292 | 8.4:-24747215 | MS.gene45624:CDS |
| AGATAGTAAACAAGGGACGG+CGG | 0.680895 | 8.4:-24747176 | MS.gene45624:CDS |
| AAGACACAAGGAAGACGAGG+AGG | 0.683212 | 8.4:-24747914 | MS.gene45624:CDS |
| GGATGGTGAAAAGAACAATG+AGG | 0.685838 | 8.4:-24747074 | MS.gene45624:CDS |
| TGATGCGAAGGATCAAGCGG+AGG | 0.696334 | 8.4:-24747212 | MS.gene45624:CDS |
| AATGAAAATACCAATGACAG+CGG | 0.700561 | 8.4:-24746143 | MS.gene45624:CDS |
| TGTTTAGGTTATCTCCCAGG+AGG | 0.705901 | 8.4:-24748146 | MS.gene45624:CDS |
| AGAAACCGGAGAAATTACAG+AGG | 0.706376 | 8.4:-24747317 | MS.gene45624:CDS |
| ATGAGCAAGATAGTAAACAA+GGG | 0.719871 | 8.4:-24747183 | MS.gene45624:CDS |
| CAAAGATGCTACTAGCAACG+AGG | 0.727750 | 8.4:-24746444 | MS.gene45624:CDS |
| AGAGCAGAATAACATCACCA+AGG | 0.736602 | 8.4:-24746780 | MS.gene45624:CDS |
| AGAAACTGGAGAAAGTACCG+AGG | 0.756900 | 8.4:-24747584 | MS.gene45624:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATGAAGAGAAGAAAAATGA+AGG | - | chr8.4:24746658-24746677 | MS.gene45624:CDS | 25.0% |
| ! | ACAAAATTGGATGATGTTAA+TGG | - | chr8.4:24746151-24746170 | MS.gene45624:CDS | 25.0% |
| ! | AGAAGAACAATTTGACAAAA+AGG | - | chr8.4:24747035-24747054 | MS.gene45624:CDS | 25.0% |
| ! | ATGAAGAGAAGAAAAATGAA+GGG | - | chr8.4:24746659-24746678 | MS.gene45624:CDS | 25.0% |
| !! | GATTTAGAATCTTCATTGTT+TGG | + | chr8.4:24747372-24747391 | None:intergenic | 25.0% |
| !!! | GTTTGGTTAGTTTATCAAAT+TGG | - | chr8.4:24745953-24745972 | MS.gene45624:CDS | 25.0% |
| AAAGAATCTCGTGTAGATTT+GGG | - | chr8.4:24748089-24748108 | MS.gene45624:CDS | 30.0% | |
| AATGAAAATACCAATGACAG+CGG | - | chr8.4:24747864-24747883 | MS.gene45624:CDS | 30.0% | |
| AATGAAGAGAACAAAGAAAC+TGG | - | chr8.4:24746409-24746428 | MS.gene45624:CDS | 30.0% | |
| AATTCCAATTCGAATGATCA+AGG | - | chr8.4:24748035-24748054 | MS.gene45624:CDS | 30.0% | |
| ACAGAAAATGATTCACAGAA+GGG | - | chr8.4:24747168-24747187 | MS.gene45624:CDS | 30.0% | |
| AGAGAATGAGGAAATCAAAA+AGG | - | chr8.4:24746333-24746352 | MS.gene45624:CDS | 30.0% | |
| AGATAATTCTGAGCATAAAG+AGG | - | chr8.4:24746180-24746199 | MS.gene45624:CDS | 30.0% | |
| ATGAGCAAGATAGTAAACAA+GGG | - | chr8.4:24746824-24746843 | MS.gene45624:CDS | 30.0% | |
| CTACAAATATGTGTTCTTGT+TGG | - | chr8.4:24745923-24745942 | MS.gene45624:CDS | 30.0% | |
| GAGAATGAAAAGATCAAAGA+TGG | - | chr8.4:24746616-24746635 | MS.gene45624:CDS | 30.0% | |
| GCAATGAAGTTGTTAAGTTA+GGG | - | chr8.4:24746023-24746042 | MS.gene45624:CDS | 30.0% | |
| TAAAGAATCTCGTGTAGATT+TGG | - | chr8.4:24748088-24748107 | MS.gene45624:CDS | 30.0% | |
| TACAAATCATGGTGAATACA+AGG | - | chr8.4:24747458-24747477 | MS.gene45624:CDS | 30.0% | |
| TGAAGAGAAGAAAAATGAAG+GGG | - | chr8.4:24746660-24746679 | MS.gene45624:CDS | 30.0% | |
| ! | ATCTTTGTTGTCAAATGTGT+TGG | + | chr8.4:24747550-24747569 | None:intergenic | 30.0% |
| AAGTGTAGAGAAAGAGAATG+AGG | - | chr8.4:24746321-24746340 | MS.gene45624:CDS | 35.0% | |
| AATGAAGAAAGCAACCAGAA+TGG | - | chr8.4:24746769-24746788 | MS.gene45624:CDS | 35.0% | |
| ACCAAGACTAGTGAAAATGA+AGG | - | chr8.4:24747942-24747961 | MS.gene45624:CDS | 35.0% | |
| ACTTCCTTGATCATTCGAAT+TGG | + | chr8.4:24748042-24748061 | None:intergenic | 35.0% | |
| AGAAACTGGAGAAAGTAATG+AGG | - | chr8.4:24746369-24746388 | MS.gene45624:CDS | 35.0% | |
| AGAGACTTCATCTGATAATC+AGG | - | chr8.4:24746906-24746925 | MS.gene45624:CDS | 35.0% | |
| AGATGCAAACTCAAAGAAAG+AGG | - | chr8.4:24747323-24747342 | MS.gene45624:CDS | 35.0% | |
| AGGAGTCAAAGATCTAAGAA+CGG | - | chr8.4:24745881-24745900 | MS.gene45624:CDS | 35.0% | |
| ATGAAGTTGTTAAGTTAGGG+AGG | - | chr8.4:24746026-24746045 | MS.gene45624:CDS | 35.0% | |
| ATTGGATGATGTTAATGGTG+TGG | - | chr8.4:24746156-24746175 | MS.gene45624:CDS | 35.0% | |
| CAAGATGGCAATACAAATCA+TGG | - | chr8.4:24747447-24747466 | MS.gene45624:CDS | 35.0% | |
| CAGAAGAAACATCATTGTGA+TGG | + | chr8.4:24748142-24748161 | None:intergenic | 35.0% | |
| CATGAGCAAGATAGTAAACA+AGG | - | chr8.4:24746823-24746842 | MS.gene45624:CDS | 35.0% | |
| CATTGTTCTTTGAGTCATTC+TGG | + | chr8.4:24747848-24747867 | None:intergenic | 35.0% | |
| CTTGTTTACTATCTTGCTCA+TGG | + | chr8.4:24746825-24746844 | None:intergenic | 35.0% | |
| GAAAAGAATTCTGGTCAAGA+AGG | - | chr8.4:24747501-24747520 | MS.gene45624:CDS | 35.0% | |
| GAAGAGAAGAAAAATGAAGG+GGG | - | chr8.4:24746661-24746680 | MS.gene45624:CDS | 35.0% | |
| GACAGAAAATGATTCACAGA+AGG | - | chr8.4:24747167-24747186 | MS.gene45624:CDS | 35.0% | |
| GAGAATGAAGAGAACAAAGA+TGG | - | chr8.4:24746460-24746479 | MS.gene45624:CDS | 35.0% | |
| GATTCTAAATCAGATGTTGC+TGG | - | chr8.4:24747381-24747400 | MS.gene45624:CDS | 35.0% | |
| GGAAATCAAAAAGGAAGTAG+AGG | - | chr8.4:24746342-24746361 | MS.gene45624:CDS | 35.0% | |
| GGCAATGAAGTTGTTAAGTT+AGG | - | chr8.4:24746022-24746041 | MS.gene45624:CDS | 35.0% | |
| GTTCTGATTCTCATTCACAT+TGG | + | chr8.4:24747907-24747926 | None:intergenic | 35.0% | |
| TCAAAATGCTAAGACTGACT+TGG | - | chr8.4:24746234-24746253 | MS.gene45624:CDS | 35.0% | |
| TGAAAAGAACAATGAGGCTA+GGG | - | chr8.4:24746939-24746958 | MS.gene45624:CDS | 35.0% | |
| TGAGACAAAGAGTAACGATA+AGG | - | chr8.4:24746744-24746763 | MS.gene45624:CDS | 35.0% | |
| TGATGCTCAAAATGAATCAG+TGG | - | chr8.4:24747965-24747984 | MS.gene45624:CDS | 35.0% | |
| TGTTATAGATGCAAGACACA+AGG | - | chr8.4:24746081-24746100 | MS.gene45624:CDS | 35.0% | |
| TTCATCTGATAATCAGGTTC+AGG | - | chr8.4:24746912-24746931 | MS.gene45624:CDS | 35.0% | |
| TTCTGAGCATAAAGAGGATT+CGG | - | chr8.4:24746186-24746205 | MS.gene45624:CDS | 35.0% | |
| ! | ATCTTTCTTTTGTTCCGATG+AGG | + | chr8.4:24747613-24747632 | None:intergenic | 35.0% |
| ! | CTTTTCCTCTGTAATTTCTC+CGG | + | chr8.4:24746698-24746717 | None:intergenic | 35.0% |
| ! | TCTTGACCAGAATTCTTTTC+CGG | + | chr8.4:24747501-24747520 | None:intergenic | 35.0% |
| ! | TTCTTGTTGGTGTTTGTGTT+TGG | - | chr8.4:24745936-24745955 | MS.gene45624:CDS | 35.0% |
| !! | ACCTTCATTTTCACTAGTCT+TGG | + | chr8.4:24747946-24747965 | None:intergenic | 35.0% |
| AAGATCTAAGAACGGCTTCA+AGG | - | chr8.4:24745889-24745908 | MS.gene45624:CDS | 40.0% | |
| ACAGAAAACAACAGTGCAGA+GGG | - | chr8.4:24747789-24747808 | MS.gene45624:CDS | 40.0% | |
| ACCGAATGACAATGCAAACT+CGG | - | chr8.4:24747668-24747687 | MS.gene45624:CDS | 40.0% | |
| AGAAACCGGAGAAATTACAG+AGG | - | chr8.4:24746690-24746709 | MS.gene45624:CDS | 40.0% | |
| AGAATTACTTTCTGCACTCG+AGG | + | chr8.4:24747640-24747659 | None:intergenic | 40.0% | |
| AGAGCAGAATAACATCACCA+AGG | - | chr8.4:24747227-24747246 | MS.gene45624:CDS | 40.0% | |
| AGTTGTTAAGTTAGGGAGGA+AGG | - | chr8.4:24746030-24746049 | MS.gene45624:CDS | 40.0% | |
| ATTGCCATCTTGAGTTTCTG+AGG | + | chr8.4:24747439-24747458 | None:intergenic | 40.0% | |
| CAAGAAGGAACACAAGAAAG+TGG | - | chr8.4:24747516-24747535 | MS.gene45624:CDS | 40.0% | |
| CCATTCTGCGATGATGTATT+CGG | + | chr8.4:24747267-24747286 | None:intergenic | 40.0% | |
| CGAATACATCATCGCAGAAT+GGG | - | chr8.4:24747265-24747284 | MS.gene45624:CDS | 40.0% | |
| GAAAACCCGGAAAAGAATTC+TGG | - | chr8.4:24747492-24747511 | MS.gene45624:CDS | 40.0% | |
| GCAAGATAGTAAACAAGGGA+CGG | - | chr8.4:24746828-24746847 | MS.gene45624:CDS | 40.0% | |
| GCATGACGAGCAAACAAAAT+TGG | - | chr8.4:24746138-24746157 | MS.gene45624:CDS | 40.0% | |
| GCTAGGGAGGAAAATTATTC+CGG | - | chr8.4:24746955-24746974 | MS.gene45624:CDS | 40.0% | |
| GGATGGTGAAAAGAACAATG+AGG | - | chr8.4:24746933-24746952 | MS.gene45624:CDS | 40.0% | |
| GTCATTAGCACTTTCATCAC+TGG | + | chr8.4:24747709-24747728 | None:intergenic | 40.0% | |
| GTGAAAAGAACAATGAGGCT+AGG | - | chr8.4:24746938-24746957 | MS.gene45624:CDS | 40.0% | |
| TACTACCTCTGATACCTCAT+CGG | - | chr8.4:24747596-24747615 | MS.gene45624:CDS | 40.0% | |
| TCATCTGAAAACAGTGCAGA+GGG | - | chr8.4:24747756-24747775 | MS.gene45624:CDS | 40.0% | |
| TCTGATAATCAGGTTCAGGA+TGG | - | chr8.4:24746916-24746935 | MS.gene45624:CDS | 40.0% | |
| TCTTCCTCAGAAACTCAAGA+TGG | - | chr8.4:24747432-24747451 | MS.gene45624:CDS | 40.0% | |
| TGAATCAGTGGAGTCGAAAA+AGG | - | chr8.4:24747977-24747996 | MS.gene45624:CDS | 40.0% | |
| TGACAACAAAGATTCTAGCC+AGG | - | chr8.4:24747725-24747744 | MS.gene45624:CDS | 40.0% | |
| TTAGATCTTTGACTCCTCCT+GGG | + | chr8.4:24745878-24745897 | None:intergenic | 40.0% | |
| TTCATCTGAAAACAGTGCAG+AGG | - | chr8.4:24747755-24747774 | MS.gene45624:CDS | 40.0% | |
| TTCTGATACATCAGTCACTC+AGG | - | chr8.4:24748061-24748080 | MS.gene45624:CDS | 40.0% | |
| TTTCAGATGAAGTAGTGACC+TGG | + | chr8.4:24747746-24747765 | None:intergenic | 40.0% | |
| TTTCCTCCACATGAGGTTTA+AGG | + | chr8.4:24746057-24746076 | None:intergenic | 40.0% | |
| ! | AGAAGGGCATGATAAGATTC+AGG | - | chr8.4:24746882-24746901 | MS.gene45624:CDS | 40.0% |
| ! | CTCTAGATGACTCTTTTCCT+CGG | + | chr8.4:24746443-24746462 | None:intergenic | 40.0% |
| ! | CTTGACCAGAATTCTTTTCC+GGG | + | chr8.4:24747500-24747519 | None:intergenic | 40.0% |
| ! | CTTTTCCGGGTTTTCATTAG+TGG | + | chr8.4:24747487-24747506 | None:intergenic | 40.0% |
| ! | TTCTGAGGAAGATGTAGTAG+TGG | + | chr8.4:24747424-24747443 | None:intergenic | 40.0% |
| ! | TTTGTTATCCACTACAGCAC+TGG | + | chr8.4:24746992-24747011 | None:intergenic | 40.0% |
| !! | AATGCTAAGACTGACTTGGA+AGG | - | chr8.4:24746238-24746257 | MS.gene45624:CDS | 40.0% |
| AAAGAACAATGAGGCTAGGG+AGG | - | chr8.4:24746942-24746961 | MS.gene45624:CDS | 45.0% | |
| AAGTGAGAGTGAGAAGGATC+AGG | - | chr8.4:24747140-24747159 | MS.gene45624:CDS | 45.0% | |
| ACAGAAGGAGGAGAGAAAGA+AGG | - | chr8.4:24746865-24746884 | MS.gene45624:CDS | 45.0% | |
| ACAGAAGTTTCCTCCACATG+AGG | + | chr8.4:24746064-24746083 | None:intergenic | 45.0% | |
| AGATAGTAAACAAGGGACGG+CGG | - | chr8.4:24746831-24746850 | MS.gene45624:CDS | 45.0% | |
| ATCAGATGTTGCTGGAGATC+AGG | - | chr8.4:24747389-24747408 | MS.gene45624:CDS | 45.0% | |
| CAAAGATGCTACTAGCAACG+AGG | - | chr8.4:24747563-24747582 | MS.gene45624:CDS | 45.0% | |
| CACAGAAAACAACAGTGCAG+AGG | - | chr8.4:24747788-24747807 | MS.gene45624:CDS | 45.0% | |
| CAGAAGGAGGAGAGAAAGAA+GGG | - | chr8.4:24746866-24746885 | MS.gene45624:CDS | 45.0% | |
| CCCGAGTTTGCATTGTCATT+CGG | + | chr8.4:24747672-24747691 | None:intergenic | 45.0% | |
| CCGAATACATCATCGCAGAA+TGG | - | chr8.4:24747264-24747283 | MS.gene45624:CDS | 45.0% | |
| CCGAATGACAATGCAAACTC+GGG | - | chr8.4:24747669-24747688 | MS.gene45624:CDS | 45.0% | |
| CGGAGTTTGTACATCATCCT+TGG | + | chr8.4:24747247-24747266 | None:intergenic | 45.0% | |
| CTTAGATCTTTGACTCCTCC+TGG | + | chr8.4:24745879-24745898 | None:intergenic | 45.0% | |
| GAAGGACCTTAAACCTCATG+TGG | - | chr8.4:24746048-24746067 | MS.gene45624:CDS | 45.0% | |
| GAAGTAGAGGACACAGAAAC+TGG | - | chr8.4:24746355-24746374 | MS.gene45624:CDS | 45.0% | |
| GAATGACAATGCAGAGACCA+AGG | - | chr8.4:24746291-24746310 | MS.gene45624:CDS | 45.0% | |
| GACGAATCTGCTCACAAAGA+TGG | - | chr8.4:24748005-24748024 | MS.gene45624:CDS | 45.0% | |
| GGACACCACTAATGAAAACC+CGG | - | chr8.4:24747479-24747498 | MS.gene45624:CDS | 45.0% | |
| TAGTGATGCGAAGGATCAAG+CGG | - | chr8.4:24746792-24746811 | MS.gene45624:CDS | 45.0% | |
| TATGGAGCGAGCACAAAAAC+TGG | - | chr8.4:24746001-24746020 | MS.gene45624:CDS | 45.0% | |
| TGAGGAAGATGTAGTAGTGG+TGG | + | chr8.4:24747421-24747440 | None:intergenic | 45.0% | |
| ! | TGTTTAGGTTATCTCCCAGG+AGG | - | chr8.4:24745861-24745880 | MS.gene45624:CDS | 45.0% |
| ! | TTGTTCCGATGAGGTATCAG+AGG | + | chr8.4:24747604-24747623 | None:intergenic | 45.0% |
| !! | AGAAACTGGAGAAAGTACCG+AGG | - | chr8.4:24746423-24746442 | MS.gene45624:CDS | 45.0% |
| !! | AGAAGTGTTTCCGCTGTCAT+TGG | + | chr8.4:24747877-24747896 | None:intergenic | 45.0% |
| AAGACACAAGGAAGACGAGG+AGG | - | chr8.4:24746093-24746112 | MS.gene45624:CDS | 50.0% | |
| ACAATGCAGAGACCAAGGAG+AGG | - | chr8.4:24746296-24746315 | MS.gene45624:CDS | 50.0% | |
| CAATGCAGAGACCAAGGAGA+GGG | - | chr8.4:24746297-24746316 | MS.gene45624:CDS | 50.0% | |
| CCAAGGAAGTGAGAGTGAGA+AGG | - | chr8.4:24747134-24747153 | MS.gene45624:CDS | 50.0% | |
| CCTTCGCATCACTACCATTC+TGG | + | chr8.4:24746786-24746805 | None:intergenic | 50.0% | |
| CCTTCTCACTCTCACTTCCT+TGG | + | chr8.4:24747137-24747156 | None:intergenic | 50.0% | |
| CTCTACACTTTCCCTCTCCT+TGG | + | chr8.4:24746311-24746330 | None:intergenic | 50.0% | |
| CTCTCCTCCTTCTGTTCCAT+TGG | + | chr8.4:24746860-24746879 | None:intergenic | 50.0% | |
| GAAGGGGGAGAGAAAGAAAC+CGG | - | chr8.4:24746676-24746695 | MS.gene45624:CDS | 50.0% | |
| GAGACCAATGGAACAGAAGG+AGG | - | chr8.4:24746853-24746872 | MS.gene45624:CDS | 50.0% | |
| GGAACTTTGCCAGACAGCAA+CGG | - | chr8.4:24748110-24748129 | MS.gene45624:CDS | 50.0% | |
| GGACCTTAAACCTCATGTGG+AGG | - | chr8.4:24746051-24746070 | MS.gene45624:CDS | 50.0% | |
| TAATGCCTCCAGTGCTGTAG+TGG | - | chr8.4:24746981-24747000 | MS.gene45624:CDS | 50.0% | |
| TCGTGTGACGGTAGAAACAG+TGG | + | chr8.4:24747109-24747128 | None:intergenic | 50.0% | |
| TGCAAGACACAAGGAAGACG+AGG | - | chr8.4:24746090-24746109 | MS.gene45624:CDS | 50.0% | |
| ! | CCAGAATGGTAGTGATGCGA+AGG | - | chr8.4:24746783-24746802 | MS.gene45624:CDS | 50.0% |
| ! | GTTATCCACTACAGCACTGG+AGG | + | chr8.4:24746989-24747008 | None:intergenic | 50.0% |
| ! | TCCTTGGCTGTTTCGTGTGA+CGG | + | chr8.4:24747121-24747140 | None:intergenic | 50.0% |
| !! | AGCACTGGAGGCATTATCTC+CGG | + | chr8.4:24746977-24746996 | None:intergenic | 50.0% |
| !! | CGCGAGCAAAAAGCGTCTTA+TGG | - | chr8.4:24745983-24746002 | MS.gene45624:CDS | 50.0% |
| ACCGTCACACGAAACAGCCA+AGG | - | chr8.4:24747117-24747136 | MS.gene45624:CDS | 55.0% | |
| GCGGAGACCAATGGAACAGA+AGG | - | chr8.4:24746850-24746869 | MS.gene45624:CDS | 55.0% | |
| TGATGCGAAGGATCAAGCGG+AGG | - | chr8.4:24746795-24746814 | MS.gene45624:CDS | 55.0% | |
| TGGCTTTCTCCGTTGCTGTC+TGG | + | chr8.4:24748122-24748141 | None:intergenic | 55.0% | |
| CAAGGGACGGCGGAGACCAA+TGG | - | chr8.4:24746841-24746860 | MS.gene45624:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 24745860 | 24748169 | 24745860 | ID=MS.gene45624 |
| chr8.4 | mRNA | 24745860 | 24748169 | 24745860 | ID=MS.gene45624.t1;Parent=MS.gene45624 |
| chr8.4 | exon | 24745860 | 24748169 | 24745860 | ID=MS.gene45624.t1.exon1;Parent=MS.gene45624.t1 |
| chr8.4 | CDS | 24745860 | 24748169 | 24745860 | ID=cds.MS.gene45624.t1;Parent=MS.gene45624.t1 |
| Gene Sequence |
| Protein sequence |
