Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56169.t1 | XP_003595094.2 | 95.4 | 1009 | 43 | 3 | 1 | 1006 | 1 | 1009 | 0.00E+00 | 1857 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56169.t1 | Q9SZR3 | 42.0 | 1082 | 477 | 35 | 1 | 1000 | 1 | 1013 | 6.4e-177 | 622.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56169.t1 | G7IGA7 | 95.4 | 1009 | 43 | 3 | 1 | 1006 | 1 | 1009 | 0.0e+00 | 1857.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene56169 | 0.829656 | 4.56E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene56169 | 0.841554 | 4.43E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene56169 | 0.806577 | 7.69E-50 | -1.69E-46 |
| MS.gene049418 | MS.gene56169 | 0.81818 | 2.24E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene56169 | 0.871748 | 5.40E-67 | -1.69E-46 |
| MS.gene049807 | MS.gene56169 | 0.840906 | 6.56E-58 | -1.69E-46 |
| MS.gene050258 | MS.gene56169 | 0.808846 | 2.53E-50 | -1.69E-46 |
| MS.gene051018 | MS.gene56169 | 0.833456 | 5.28E-56 | -1.69E-46 |
| MS.gene051201 | MS.gene56169 | 0.816363 | 5.75E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene56169 | 0.809644 | 1.71E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene56169 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene05157 | MS.gene56169 | 0.803976 | 2.70E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene56169 | 0.827558 | 1.46E-54 | -1.69E-46 |
| MS.gene051664 | MS.gene56169 | 0.826143 | 3.19E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene56169 | 0.841385 | 4.91E-58 | -1.69E-46 |
| MS.gene051720 | MS.gene56169 | 0.859389 | 4.28E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene56169 | 0.81902 | 1.45E-52 | -1.69E-46 |
| MS.gene052000 | MS.gene56169 | 0.822753 | 2.00E-53 | -1.69E-46 |
| MS.gene052168 | MS.gene56169 | 0.812384 | 4.36E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene56169 | 0.802142 | 6.45E-49 | -1.69E-46 |
| MS.gene052514 | MS.gene56169 | 0.825022 | 5.88E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene56169 | 0.832306 | 1.02E-55 | -1.69E-46 |
| MS.gene053122 | MS.gene56169 | 0.826758 | 2.28E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene56169 | 0.850315 | 1.84E-60 | -1.69E-46 |
| MS.gene053168 | MS.gene56169 | 0.803554 | 3.30E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene56169 | 0.818791 | 1.63E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene56169 | 0.860696 | 1.73E-63 | -1.69E-46 |
| MS.gene053538 | MS.gene56169 | 0.859868 | 3.07E-63 | -1.69E-46 |
| MS.gene053542 | MS.gene56169 | 0.802854 | 4.60E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene56169 | 0.80638 | 8.46E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene56169 | 0.821914 | 3.13E-53 | -1.69E-46 |
| MS.gene054142 | MS.gene56169 | 0.838334 | 3.06E-57 | -1.69E-46 |
| MS.gene054178 | MS.gene56169 | 0.802144 | 6.45E-49 | -1.69E-46 |
| MS.gene054557 | MS.gene56169 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene56169 | 0.845307 | 4.41E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene56169 | 0.815293 | 9.96E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene56169 | 0.801114 | 1.05E-48 | -1.69E-46 |
| MS.gene055083 | MS.gene56169 | 0.804442 | 2.16E-49 | -1.69E-46 |
| MS.gene055144 | MS.gene56169 | 0.811036 | 8.56E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene56169 | 0.838792 | 2.33E-57 | -1.69E-46 |
| MS.gene055466 | MS.gene56169 | 0.832066 | 1.17E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene56169 | 0.819687 | 1.02E-52 | -1.69E-46 |
| MS.gene055537 | MS.gene56169 | 0.870209 | 1.73E-66 | -1.69E-46 |
| MS.gene055580 | MS.gene56169 | -0.813368 | 2.65E-51 | -1.69E-46 |
| MS.gene055653 | MS.gene56169 | 0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene055764 | MS.gene56169 | 0.803889 | 2.81E-49 | -1.69E-46 |
| MS.gene055890 | MS.gene56169 | 0.804117 | 2.52E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene56169 | 0.817503 | 3.19E-52 | -1.69E-46 |
| MS.gene056005 | MS.gene56169 | 0.830858 | 2.32E-55 | -1.69E-46 |
| MS.gene056050 | MS.gene56169 | 0.822494 | 2.30E-53 | -1.69E-46 |
| MS.gene056169 | MS.gene56169 | 0.828066 | 1.11E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene56169 | 0.836387 | 9.64E-57 | -1.69E-46 |
| MS.gene05686 | MS.gene56169 | 0.826735 | 2.30E-54 | -1.69E-46 |
| MS.gene057082 | MS.gene56169 | 0.855081 | 8.02E-62 | -1.69E-46 |
| MS.gene057102 | MS.gene56169 | 0.803564 | 3.28E-49 | -1.69E-46 |
| MS.gene057132 | MS.gene56169 | 0.833992 | 3.88E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene56169 | 0.80087 | 1.18E-48 | -1.69E-46 |
| MS.gene058492 | MS.gene56169 | 0.818971 | 1.48E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene56169 | 0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene058649 | MS.gene56169 | 0.818072 | 2.37E-52 | -1.69E-46 |
| MS.gene058668 | MS.gene56169 | 0.834 | 3.86E-56 | -1.69E-46 |
| MS.gene05894 | MS.gene56169 | 0.881843 | 1.71E-70 | -1.69E-46 |
| MS.gene059015 | MS.gene56169 | 0.809832 | 1.56E-50 | -1.69E-46 |
| MS.gene059424 | MS.gene56169 | 0.849101 | 4.01E-60 | -1.69E-46 |
| MS.gene059425 | MS.gene56169 | 0.810046 | 1.40E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene56169 | 0.807218 | 5.63E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene56169 | 0.824776 | 6.72E-54 | -1.69E-46 |
| MS.gene060519 | MS.gene56169 | 0.834303 | 3.24E-56 | -1.69E-46 |
| MS.gene060587 | MS.gene56169 | 0.808546 | 2.94E-50 | -1.69E-46 |
| MS.gene060962 | MS.gene56169 | 0.81024 | 1.27E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene56169 | 0.814367 | 1.60E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56169.t1 | MTR_2g038200 | 96.729 | 1009 | 30 | 3 | 1 | 1006 | 1 | 1009 | 0.0 | 2009 |
| MS.gene56169.t1 | MTR_4g127290 | 52.276 | 637 | 214 | 20 | 397 | 1006 | 247 | 820 | 0.0 | 548 |
| MS.gene56169.t1 | MTR_4g127290 | 62.602 | 246 | 52 | 8 | 1 | 210 | 1 | 242 | 9.49e-67 | 241 |
| MS.gene56169.t1 | MTR_4g129230 | 30.317 | 1072 | 551 | 41 | 1 | 964 | 1 | 984 | 6.85e-109 | 362 |
| MS.gene56169.t1 | MTR_1g090640 | 40.417 | 527 | 253 | 17 | 1 | 500 | 1 | 493 | 1.75e-103 | 343 |
| MS.gene56169.t1 | MTR_1g057150 | 40.228 | 527 | 241 | 17 | 1 | 500 | 1 | 480 | 9.47e-98 | 327 |
| MS.gene56169.t1 | MTR_5g071060 | 26.479 | 997 | 530 | 39 | 1 | 863 | 1 | 928 | 2.48e-44 | 174 |
| MS.gene56169.t1 | MTR_5g071060 | 26.791 | 1019 | 532 | 42 | 1 | 863 | 1 | 961 | 4.21e-44 | 174 |
| MS.gene56169.t1 | MTR_3g464150 | 30.162 | 557 | 279 | 23 | 1 | 498 | 1 | 506 | 1.26e-34 | 144 |
| MS.gene56169.t1 | MTR_3g070850 | 31.991 | 422 | 216 | 13 | 1 | 397 | 1 | 376 | 5.84e-34 | 141 |
| MS.gene56169.t1 | MTR_4g109450 | 30.078 | 256 | 144 | 9 | 26 | 280 | 20 | 241 | 9.22e-18 | 89.4 |
| MS.gene56169.t1 | MTR_4g109450 | 30.078 | 256 | 144 | 8 | 26 | 280 | 20 | 241 | 1.51e-17 | 88.6 |
| MS.gene56169.t1 | MTR_1384s0010 | 52.632 | 76 | 30 | 3 | 52 | 124 | 32 | 104 | 2.37e-14 | 70.5 |
| MS.gene56169.t1 | MTR_1183s0010 | 46.392 | 97 | 46 | 3 | 86 | 179 | 16 | 109 | 3.32e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56169.t1 | AT4G29920 | 41.720 | 1093 | 467 | 38 | 1 | 1000 | 1 | 1016 | 0.0 | 661 |
| MS.gene56169.t1 | AT4G29920 | 41.537 | 1093 | 466 | 38 | 1 | 1000 | 1 | 1013 | 0.0 | 655 |
| MS.gene56169.t1 | AT5G57130 | 41.846 | 1116 | 447 | 49 | 1 | 1003 | 1 | 1027 | 0.0 | 635 |
| MS.gene56169.t1 | AT3G52490 | 40.619 | 517 | 236 | 14 | 1 | 496 | 1 | 467 | 2.54e-105 | 347 |
| MS.gene56169.t1 | AT5G57710 | 33.333 | 828 | 417 | 29 | 1 | 758 | 1 | 763 | 6.31e-102 | 343 |
| MS.gene56169.t1 | AT4G30350 | 32.633 | 904 | 434 | 35 | 1 | 828 | 1 | 805 | 4.18e-87 | 300 |
| MS.gene56169.t1 | AT2G29970 | 26.825 | 1055 | 586 | 42 | 1 | 962 | 1 | 962 | 3.01e-56 | 212 |
| MS.gene56169.t1 | AT1G07200 | 27.158 | 869 | 457 | 36 | 1 | 777 | 1 | 785 | 5.38e-46 | 180 |
| MS.gene56169.t1 | AT2G40130 | 31.655 | 417 | 232 | 16 | 1 | 397 | 1 | 384 | 1.10e-40 | 162 |
| MS.gene56169.t1 | AT2G40130 | 31.655 | 417 | 232 | 16 | 1 | 397 | 1 | 384 | 1.21e-40 | 162 |
| MS.gene56169.t1 | AT1G74310 | 26.953 | 256 | 152 | 9 | 26 | 280 | 20 | 241 | 3.55e-15 | 80.9 |
| MS.gene56169.t1 | AT1G74310 | 26.953 | 256 | 152 | 8 | 26 | 280 | 20 | 241 | 4.87e-15 | 80.5 |
Find 157 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATTGTTAACTACTTAA+TGG | 0.116030 | 2.3:-50769777 | MS.gene56169:CDS |
| ATAATTCATCATACCCTTAT+TGG | 0.138198 | 2.3:-50771221 | MS.gene56169:CDS |
| AAAATGGGATAGTGGGTTTA+TGG | 0.183846 | 2.3:-50769822 | MS.gene56169:CDS |
| CTTGTCAAATCACTTGAAAT+TGG | 0.210696 | 2.3:+50770175 | None:intergenic |
| CTACCTTGGTTTGGCCAATA+AGG | 0.218068 | 2.3:+50771207 | None:intergenic |
| CAATGAAAAGTTTGTTGTTT+TGG | 0.224683 | 2.3:-50770623 | MS.gene56169:CDS |
| AACCATTTCTTGAGTTCTTA+TGG | 0.228156 | 2.3:-50773539 | MS.gene56169:CDS |
| GATATTGAACTTGGTGTATC+TGG | 0.233918 | 2.3:+50771174 | None:intergenic |
| TTCTTGAGTTCTTATGGTTA+TGG | 0.246625 | 2.3:-50773533 | MS.gene56169:CDS |
| CCATTAAGTAGTTAACAATT+TGG | 0.247388 | 2.3:+50769777 | None:intergenic |
| TAAGGGTATGATGAATTATA+AGG | 0.279485 | 2.3:+50771225 | None:intergenic |
| ATTGCAAAGTTTGGAACTTT+AGG | 0.282514 | 2.3:-50770541 | MS.gene56169:CDS |
| ACAAGTTTAGAGAGGGTTAA+TGG | 0.285676 | 2.3:-50769899 | MS.gene56169:CDS |
| AGAAGAATCTGTTGCCTTCA+TGG | 0.287597 | 2.3:-50771731 | MS.gene56169:CDS |
| CCTGTTCCATCTGGTGGACT+TGG | 0.302111 | 2.3:-50772927 | MS.gene56169:CDS |
| TATAGTTTATACACTTTGTT+GGG | 0.306813 | 2.3:-50769861 | MS.gene56169:CDS |
| AAAATCTTCTGAGTCTAATA+AGG | 0.315204 | 2.3:-50773456 | MS.gene56169:CDS |
| GATTATGTTGTGGAAGAAAT+AGG | 0.322451 | 2.3:-50773080 | MS.gene56169:CDS |
| GTCATTTCCTTGTTCTTAGC+TGG | 0.323821 | 2.3:+50770076 | None:intergenic |
| AGTAACAACAACCTTGGAAT+TGG | 0.329743 | 2.3:-50771031 | MS.gene56169:CDS |
| TCATCAAAATCACCTTGTTT+AGG | 0.334064 | 2.3:-50770382 | MS.gene56169:CDS |
| GGAACAAGAATGGTAAGATT+TGG | 0.338899 | 2.3:-50773037 | MS.gene56169:CDS |
| GTTAGTGATTATGTTGCATT+AGG | 0.341264 | 2.3:-50773185 | MS.gene56169:CDS |
| ATGTTTGAGAAATGGCTAAA+AGG | 0.352149 | 2.3:-50769932 | MS.gene56169:CDS |
| GATAAGGTGATAGAGGAAAT+TGG | 0.356476 | 2.3:-50769983 | MS.gene56169:CDS |
| CTAACAACATGTTTGAGAAA+TGG | 0.359340 | 2.3:-50769940 | MS.gene56169:CDS |
| AGTAGAGTTATGAGAGAAGC+TGG | 0.362568 | 2.3:-50773653 | MS.gene56169:CDS |
| GTGGTTGCTGCTGCTGTTGT+TGG | 0.363016 | 2.3:+50773738 | None:intergenic |
| AAATGGGATAGTGGGTTTAT+GGG | 0.369377 | 2.3:-50769821 | MS.gene56169:CDS |
| GGCAACAGATTCTTCTGGTC+TGG | 0.371234 | 2.3:+50771738 | None:intergenic |
| TACCTTGGTTTGGCCAATAA+GGG | 0.372431 | 2.3:+50771208 | None:intergenic |
| TTGGTTGAAAATGCTGATTT+TGG | 0.372782 | 2.3:-50770604 | MS.gene56169:CDS |
| GAATTTGAGATTGCAAAGTT+TGG | 0.378824 | 2.3:-50770550 | MS.gene56169:CDS |
| CAAGCTGTTCCTGTTCCATC+TGG | 0.386300 | 2.3:-50772936 | MS.gene56169:CDS |
| ATTCCAAGGTTGTTGTTACT+TGG | 0.386999 | 2.3:+50771034 | None:intergenic |
| GTTTGAACTATAAGCTGGTT+TGG | 0.387155 | 2.3:+50771134 | None:intergenic |
| GCAATAGCAGAATCAGTGTT+TGG | 0.414527 | 2.3:-50770736 | MS.gene56169:CDS |
| CGCGCCGGAACCGAGGTATA+AGG | 0.419196 | 2.3:+50771112 | None:intergenic |
| ATCATTGAAGTTGAACTCAA+TGG | 0.420697 | 2.3:+50771074 | None:intergenic |
| TACAAGGAAATGATTCTGTT+GGG | 0.421749 | 2.3:-50770777 | MS.gene56169:CDS |
| GGAAAGTTGTTTGGTGAAGA+AGG | 0.427180 | 2.3:-50773059 | MS.gene56169:CDS |
| TCATATATATAAAGTGTTGC+AGG | 0.428362 | 2.3:-50770893 | MS.gene56169:CDS |
| GTGGTAAAGAGGATAGAAAA+TGG | 0.429390 | 2.3:-50769838 | MS.gene56169:CDS |
| CATCAAAGGAATGTGCTACT+TGG | 0.430549 | 2.3:-50770807 | MS.gene56169:CDS |
| CACCATTGATTCTCAAAAGT+TGG | 0.432170 | 2.3:+50772963 | None:intergenic |
| TAGTTCAATAGCAGAAGCTT+TGG | 0.437063 | 2.3:-50770842 | MS.gene56169:CDS |
| TCTTTAACTGAAGGACTAGT+TGG | 0.442649 | 2.3:-50773359 | MS.gene56169:CDS |
| AACCATAAGAACTCAAGAAA+TGG | 0.445877 | 2.3:+50773537 | None:intergenic |
| TGGAGATTTGAAGTGGATAG+TGG | 0.446714 | 2.3:-50773141 | MS.gene56169:CDS |
| ATTGACATTACTGCCACCAT+TGG | 0.450158 | 2.3:+50770498 | None:intergenic |
| GAAGGATTCAGTGATGAAGT+TGG | 0.452059 | 2.3:-50770464 | MS.gene56169:CDS |
| GAGGATAGAAAATGGGATAG+TGG | 0.454439 | 2.3:-50769830 | MS.gene56169:CDS |
| GTATAGTTTATACACTTTGT+TGG | 0.454781 | 2.3:-50769862 | MS.gene56169:CDS |
| CAAATTCTCAATTGAGTCTA+GGG | 0.457600 | 2.3:+50770117 | None:intergenic |
| GTGATAGAGGAAATTGGTGT+AGG | 0.463249 | 2.3:-50769977 | MS.gene56169:CDS |
| TGTACAAGATAAGGTGATAG+AGG | 0.466717 | 2.3:-50769990 | MS.gene56169:CDS |
| AAGATACTACTACCTTGGTT+TGG | 0.466919 | 2.3:+50771198 | None:intergenic |
| CAAACCTTATACCTCGGTTC+CGG | 0.467247 | 2.3:-50771116 | MS.gene56169:CDS |
| AAAATTTAGTGTACAAGATA+AGG | 0.472610 | 2.3:-50769999 | MS.gene56169:CDS |
| ACAAATTCTCAATTGAGTCT+AGG | 0.473106 | 2.3:+50770116 | None:intergenic |
| GATGGTGATAACTCAAAAGT+TGG | 0.473844 | 2.3:+50770412 | None:intergenic |
| TTTGAGGTTGTTTGTTCTGG+TGG | 0.473926 | 2.3:+50771289 | None:intergenic |
| AAAGGTGAAGTAGTAGTTGT+TGG | 0.474280 | 2.3:+50773857 | None:intergenic |
| TCAAAACCCATCTCCTATGC+TGG | 0.480572 | 2.3:-50771856 | MS.gene56169:CDS |
| AACAGAAGGGTCATCAAGAA+TGG | 0.480936 | 2.3:+50773676 | None:intergenic |
| CTGGCAAGATACTACTACCT+TGG | 0.481842 | 2.3:+50771193 | None:intergenic |
| ATTGGATTCTCTCAAGGGTA+TGG | 0.481930 | 2.3:-50771013 | MS.gene56169:CDS |
| AAGGGTATGATGAATTATAA+GGG | 0.483177 | 2.3:+50771226 | None:intergenic |
| ATAAGGTTTGAACTATAAGC+TGG | 0.485992 | 2.3:+50771129 | None:intergenic |
| ATGAAGGCAACAGATTCTTC+TGG | 0.489093 | 2.3:+50771733 | None:intergenic |
| TTACAAGGAAATGATTCTGT+TGG | 0.489998 | 2.3:-50770778 | MS.gene56169:CDS |
| GCTGTTCCTGTTCCATCTGG+TGG | 0.490790 | 2.3:-50772933 | MS.gene56169:CDS |
| AACTATGATTGTTGCTCCAA+TGG | 0.491661 | 2.3:+50771265 | None:intergenic |
| CCAAGGATTGAAGAAAATGA+AGG | 0.493746 | 2.3:-50770313 | MS.gene56169:CDS |
| GAGCTCAAGCTCATCAAAGA+AGG | 0.494543 | 2.3:-50773778 | MS.gene56169:CDS |
| GTTTGAGTCTTCATTCATCA+AGG | 0.497632 | 2.3:-50772905 | MS.gene56169:intron |
| AGGATAGAAAATGGGATAGT+GGG | 0.497966 | 2.3:-50769829 | MS.gene56169:CDS |
| GATTTGACAAGAGAAACATT+AGG | 0.500539 | 2.3:-50770163 | MS.gene56169:CDS |
| ATGTTATTAGAGTGTTGAAA+AGG | 0.506322 | 2.3:-50773211 | MS.gene56169:CDS |
| GAAAGTTGTTTGGTGAAGAA+GGG | 0.506532 | 2.3:-50773058 | MS.gene56169:CDS |
| TCAACTTTAACACTCAAAAG+TGG | 0.507140 | 2.3:+50773719 | None:intergenic |
| ATAAGGGTAGATCTTTGCAT+TGG | 0.508400 | 2.3:+50771242 | None:intergenic |
| CCAAGTCCACCAGATGGAAC+AGG | 0.510866 | 2.3:+50772927 | None:intergenic |
| TCAATCTTGAAGCACTCTCT+AGG | 0.512470 | 2.3:-50774055 | MS.gene56169:CDS |
| GGTTGATTCAAAATCATCAA+AGG | 0.514321 | 2.3:-50770821 | MS.gene56169:CDS |
| TGGTAAAGAGGATAGAAAAT+GGG | 0.517397 | 2.3:-50769837 | MS.gene56169:CDS |
| TTGATTCCAGCATAGGAGAT+GGG | 0.522179 | 2.3:+50771850 | None:intergenic |
| ACTTTGTTGGGGTGGTAAAG+AGG | 0.524368 | 2.3:-50769849 | MS.gene56169:CDS |
| GAGGAAATTGGTGTAGGGTG+TGG | 0.525237 | 2.3:-50769971 | MS.gene56169:CDS |
| AGAAGATGAAGACTATGATG+AGG | 0.527194 | 2.3:-50770209 | MS.gene56169:CDS |
| GATACAGTTTCTTTAACTGA+AGG | 0.527453 | 2.3:-50773368 | MS.gene56169:CDS |
| ATAGTTCAAACCTTATACCT+CGG | 0.527851 | 2.3:-50771122 | MS.gene56169:CDS |
| TTTGATTCCAGCATAGGAGA+TGG | 0.528413 | 2.3:+50771849 | None:intergenic |
| GTTACATGAGGTGTCAAATG+AGG | 0.528631 | 2.3:-50772989 | MS.gene56169:CDS |
| CTTGGAATTGGATTCTCTCA+AGG | 0.529516 | 2.3:-50771019 | MS.gene56169:CDS |
| TGGATAGTGGATGATAATGA+TGG | 0.530923 | 2.3:-50773128 | MS.gene56169:CDS |
| TATTAGAGTGTTGAAAAGGA+AGG | 0.532303 | 2.3:-50773207 | MS.gene56169:CDS |
| GCATTTCTTAAAGAAGAAGA+TGG | 0.533196 | 2.3:+50773965 | None:intergenic |
| AAGAAGAACACTGTGATAGT+TGG | 0.533806 | 2.3:-50773392 | MS.gene56169:CDS |
| GAAGATGAAGACTATGATGA+GGG | 0.534488 | 2.3:-50770208 | MS.gene56169:CDS |
| GAAGAAATAGGAAAGTTGTT+TGG | 0.534540 | 2.3:-50773068 | MS.gene56169:CDS |
| GACAAAGATGTTTATGTCAA+GGG | 0.535057 | 2.3:-50770056 | MS.gene56169:CDS |
| GTTTATACACTTTGTTGGGG+TGG | 0.536531 | 2.3:-50769857 | MS.gene56169:CDS |
| GTTTAGAGAGGGTTAATGGT+GGG | 0.538900 | 2.3:-50769895 | MS.gene56169:CDS |
| TGACAAAGATGTTTATGTCA+AGG | 0.539341 | 2.3:-50770057 | MS.gene56169:CDS |
| GATTATGTTGCATTAGGTGT+TGG | 0.539481 | 2.3:-50773179 | MS.gene56169:CDS |
| GGTGAAGAAGGGAACAAGAA+TGG | 0.542309 | 2.3:-50773047 | MS.gene56169:CDS |
| AGCTCAAGCTCATCAAAGAA+GGG | 0.544619 | 2.3:-50773777 | MS.gene56169:CDS |
| CTCATAACTCTACTAACAGA+AGG | 0.547154 | 2.3:+50773662 | None:intergenic |
| ACAAACAACCTCAAAACCAT+TGG | 0.547893 | 2.3:-50771281 | MS.gene56169:CDS |
| TAGCAAATTGTAATGCGCTC+AGG | 0.548048 | 2.3:-50774118 | None:intergenic |
| ATAATGAAAAGATTTGAAAG+AGG | 0.551174 | 2.3:-50773332 | MS.gene56169:CDS |
| GTAAAGACAACTCTTGCACT+TGG | 0.555155 | 2.3:-50770976 | MS.gene56169:CDS |
| TCAACAAAAGATATTGAACT+TGG | 0.555816 | 2.3:+50771165 | None:intergenic |
| TTGGAATTGGATTCTCTCAA+GGG | 0.562145 | 2.3:-50771018 | MS.gene56169:CDS |
| AGTGTAGCAGCAACGTGAAG+AGG | 0.562888 | 2.3:+50773998 | None:intergenic |
| AAACCAAGTAACAACAACCT+TGG | 0.563498 | 2.3:-50771037 | MS.gene56169:CDS |
| TGTTGTCCGCGCCGGAACCG+AGG | 0.564126 | 2.3:+50771105 | None:intergenic |
| TTAGAGAGGGTTAATGGTGG+GGG | 0.564593 | 2.3:-50769893 | MS.gene56169:CDS |
| CTAACTGTTTCACATTGCCA+TGG | 0.568665 | 2.3:+50770862 | None:intergenic |
| TGATAGAGGAAATTGGTGTA+GGG | 0.570147 | 2.3:-50769976 | MS.gene56169:CDS |
| CTTCAAGATTGAAGCAGCCT+CGG | 0.571682 | 2.3:+50774066 | None:intergenic |
| TGTCAATGAAGATCAGAAGA+AGG | 0.573112 | 2.3:-50770482 | MS.gene56169:CDS |
| CAAGGATTGAAGAAAATGAA+GGG | 0.573650 | 2.3:-50770312 | MS.gene56169:CDS |
| TAGCACAGAAGCACGTCAGA+AGG | 0.576747 | 2.3:-50771697 | MS.gene56169:intron |
| CTTGAGAGAATCCAATTCCA+AGG | 0.578207 | 2.3:+50771020 | None:intergenic |
| TTTAGAGAGGGTTAATGGTG+GGG | 0.579670 | 2.3:-50769894 | MS.gene56169:CDS |
| GAGCTCTACATTGAAGAGGA+TGG | 0.582696 | 2.3:+50773915 | None:intergenic |
| AAAATATTCATATTGTCCAA+TGG | 0.583934 | 2.3:-50770514 | MS.gene56169:CDS |
| TCTATGTTGGAGATTTGAAG+TGG | 0.587362 | 2.3:-50773148 | MS.gene56169:CDS |
| TGAACTTGACTTGTTTAGCA+AGG | 0.587561 | 2.3:-50770344 | MS.gene56169:CDS |
| ATAGTTTATACACTTTGTTG+GGG | 0.593962 | 2.3:-50769860 | MS.gene56169:CDS |
| GGTAAAAGAGTCATTTGAGG+AGG | 0.594837 | 2.3:-50770035 | MS.gene56169:CDS |
| TCAAGAGCTCTACATTGAAG+AGG | 0.598089 | 2.3:+50773911 | None:intergenic |
| ACATGCTGTGGTTGAAGCAA+AGG | 0.603439 | 2.3:+50773839 | None:intergenic |
| TTACATGAGGTGTCAAATGA+GGG | 0.606608 | 2.3:-50772988 | MS.gene56169:CDS |
| AGAGATTGTTGATTATGTTG+TGG | 0.609416 | 2.3:-50773090 | MS.gene56169:CDS |
| AGTTTAGAGAGGGTTAATGG+TGG | 0.613323 | 2.3:-50769896 | MS.gene56169:CDS |
| CTAGGCTTAGCACGTAGAAG+AGG | 0.615440 | 2.3:-50774037 | MS.gene56169:CDS |
| CTCAAACCAAGTCCACCAGA+TGG | 0.615673 | 2.3:+50772921 | None:intergenic |
| ATGAGTGCATTAGAAAGTGA+AGG | 0.616666 | 2.3:+50773815 | None:intergenic |
| CTATGAGAGTGAAGCCATGA+AGG | 0.621620 | 2.3:+50771717 | None:intergenic |
| TGCATGATTGTTGTCCGCGC+CGG | 0.621817 | 2.3:+50771097 | None:intergenic |
| AAGGGTAAAAGAGTCATTTG+AGG | 0.622133 | 2.3:-50770038 | MS.gene56169:CDS |
| GCTCAAGCTCATCAAAGAAG+GGG | 0.624859 | 2.3:-50773776 | MS.gene56169:CDS |
| TCAAAGTCCAGCTAAGAACA+AGG | 0.627959 | 2.3:-50770083 | MS.gene56169:CDS |
| AAATGGTTATGACTAAGAGA+AGG | 0.639749 | 2.3:+50773554 | None:intergenic |
| ATATTCATATTGTCCAATGG+TGG | 0.641525 | 2.3:-50770511 | MS.gene56169:CDS |
| TCATAACTCTACTAACAGAA+GGG | 0.643236 | 2.3:+50773663 | None:intergenic |
| TACCCTTATTGGCCAAACCA+AGG | 0.646502 | 2.3:-50771210 | MS.gene56169:CDS |
| GAAGAGGTGTGATTTGTGCA+TGG | 0.654069 | 2.3:+50774014 | None:intergenic |
| TGTTGCAGGAGAATGTTCCA+TGG | 0.660728 | 2.3:-50770879 | MS.gene56169:CDS |
| CTCAAGCTCATCAAAGAAGG+GGG | 0.661271 | 2.3:-50773775 | MS.gene56169:CDS |
| CTAGTTATCAAAGTTACATG+AGG | 0.668274 | 2.3:-50773001 | MS.gene56169:CDS |
| GAAAGTGAAGGAACATGCTG+TGG | 0.672616 | 2.3:+50773827 | None:intergenic |
| GCAAGAGACACTAACAGCCG+AGG | 0.683106 | 2.3:-50774083 | MS.gene56169:CDS |
| CTTATACCTCGGTTCCGGCG+CGG | 0.701684 | 2.3:-50771111 | MS.gene56169:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTTTTATTTTAAATA+TGG | - | chr2.3:50771435-50771454 | MS.gene56169:intron | 0.0% |
| !! | TAAAAAAAATACAAAAAAGA+GGG | - | chr2.3:50771365-50771384 | MS.gene56169:intron | 10.0% |
| !! | AATATCATAAAGTAAAAACA+TGG | - | chr2.3:50771718-50771737 | MS.gene56169:CDS | 15.0% |
| !! | ATTTATCAAAACATATATGA+AGG | - | chr2.3:50771076-50771095 | MS.gene56169:CDS | 15.0% |
| !! | CAATAATACACAAAATATAT+CGG | + | chr2.3:50771907-50771926 | None:intergenic | 15.0% |
| !! | CTAAAAAAAATACAAAAAAG+AGG | - | chr2.3:50771364-50771383 | MS.gene56169:intron | 15.0% |
| !!! | AGTGTTTATTTGTTTAATTT+TGG | - | chr2.3:50771940-50771959 | MS.gene56169:intron | 15.0% |
| !!! | TTAACAATTTGGATATTTTT+AGG | + | chr2.3:50774093-50774112 | None:intergenic | 15.0% |
| !! | AAAATATTCATATTGTCCAA+TGG | - | chr2.3:50773364-50773383 | MS.gene56169:CDS | 20.0% |
| !! | AAAATTTAGTGTACAAGATA+AGG | - | chr2.3:50773879-50773898 | MS.gene56169:CDS | 20.0% |
| !! | ATAATGAAAAGATTTGAAAG+AGG | - | chr2.3:50770546-50770565 | MS.gene56169:CDS | 20.0% |
| !! | ATCATTAGATCAAAATTAGA+CGG | - | chr2.3:50772405-50772424 | MS.gene56169:intron | 20.0% |
| !! | ATGATTAAAATGTTTCAACT+AGG | + | chr2.3:50772390-50772409 | None:intergenic | 20.0% |
| !! | GTCTTTCATTAGTAAATTTA+TGG | + | chr2.3:50771184-50771203 | None:intergenic | 20.0% |
| !! | TATAGTTTATACACTTTGTT+GGG | - | chr2.3:50774017-50774036 | MS.gene56169:CDS | 20.0% |
| !!! | ATCTTATGTGATTTTTTACT+TGG | - | chr2.3:50772470-50772489 | MS.gene56169:intron | 20.0% |
| !!! | CGATATATTTTGTGTATTAT+TGG | - | chr2.3:50771905-50771924 | MS.gene56169:intron | 20.0% |
| !!! | TAAGAATAAATAGTCCTTTT+TGG | - | chr2.3:50771038-50771057 | MS.gene56169:CDS | 20.0% |
| !!! | TGGACAATATGAATATTTTT+TGG | + | chr2.3:50773363-50773382 | None:intergenic | 20.0% |
| !!! | TTAATTTGTTTTGCAATTTG+TGG | - | chr2.3:50771506-50771525 | MS.gene56169:intron | 20.0% |
| !!! | TTACTTTATGATATTGCTTT+TGG | + | chr2.3:50771713-50771732 | None:intergenic | 20.0% |
| !!! | TTGGTGTATGTTTAAAATAA+TGG | - | chr2.3:50772489-50772508 | MS.gene56169:intron | 20.0% |
| !!! | TTGTTTTTTAGTTTCAACTT+AGG | - | chr2.3:50771132-50771151 | MS.gene56169:CDS | 20.0% |
| !!! | TTTTGTAATTTTGATACAGT+CGG | - | chr2.3:50771315-50771334 | MS.gene56169:CDS | 20.0% |
| ! | AAAATCTTCTGAGTCTAATA+AGG | - | chr2.3:50770422-50770441 | MS.gene56169:CDS | 25.0% |
| ! | ATAATTCATCATACCCTTAT+TGG | - | chr2.3:50772657-50772676 | MS.gene56169:intron | 25.0% |
| ! | ATAGTTTATACACTTTGTTG+GGG | - | chr2.3:50774018-50774037 | MS.gene56169:CDS | 25.0% |
| ! | ATGATAAGTGTTTATGTGAA+AGG | - | chr2.3:50771483-50771502 | MS.gene56169:intron | 25.0% |
| ! | CCAAATTGTTAACTACTTAA+TGG | - | chr2.3:50774101-50774120 | MS.gene56169:CDS | 25.0% |
| ! | CCATTAAGTAGTTAACAATT+TGG | + | chr2.3:50774104-50774123 | None:intergenic | 25.0% |
| ! | GTATAGTTTATACACTTTGT+TGG | - | chr2.3:50774016-50774035 | MS.gene56169:CDS | 25.0% |
| ! | TATTTAAGAGAATGAAACGT+TGG | + | chr2.3:50771773-50771792 | None:intergenic | 25.0% |
| ! | TCAACAAAAGATATTGAACT+TGG | + | chr2.3:50772716-50772735 | None:intergenic | 25.0% |
| ! | TCCTTCTGTTAAAAACAATT+TGG | - | chr2.3:50770257-50770276 | MS.gene56169:CDS | 25.0% |
| ! | TTACTAACAAAACACGTTTA+AGG | - | chr2.3:50771288-50771307 | MS.gene56169:CDS | 25.0% |
| ! | TTTGTATTCTTGTACAAGTT+GGG | + | chr2.3:50772228-50772247 | None:intergenic | 25.0% |
| !! | AAGGGTATGATGAATTATAA+GGG | + | chr2.3:50772655-50772674 | None:intergenic | 25.0% |
| !! | CTTCTTTTATTACCTAAACA+AGG | + | chr2.3:50773511-50773530 | None:intergenic | 25.0% |
| !! | TAAGGGTATGATGAATTATA+AGG | + | chr2.3:50772656-50772675 | None:intergenic | 25.0% |
| !! | TATAGACTAAAGTACCAAAA+AGG | + | chr2.3:50771055-50771074 | None:intergenic | 25.0% |
| !! | TTTTCAAACAAGTTTAGAGA+GGG | - | chr2.3:50773972-50773991 | MS.gene56169:CDS | 25.0% |
| !! | TTTTGTATTCTTGTACAAGT+TGG | + | chr2.3:50772229-50772248 | None:intergenic | 25.0% |
| !!! | ATCAAAGTTTTTCAGTAACA+AGG | - | chr2.3:50772046-50772065 | MS.gene56169:intron | 25.0% |
| !!! | ATGTTATTAGAGTGTTGAAA+AGG | - | chr2.3:50770667-50770686 | MS.gene56169:CDS | 25.0% |
| !!! | CAATGAAAAGTTTGTTGTTT+TGG | - | chr2.3:50773255-50773274 | MS.gene56169:CDS | 25.0% |
| !!! | GAACAATTCAATGTTTTTTC+AGG | - | chr2.3:50772517-50772536 | MS.gene56169:intron | 25.0% |
| !!! | GTGTATTTTGTTACTTAGTT+TGG | - | chr2.3:50771098-50771117 | MS.gene56169:CDS | 25.0% |
| !!! | GTTTAATTTTGGATGCTAAT+TGG | - | chr2.3:50771951-50771970 | MS.gene56169:intron | 25.0% |
| !!! | TCATATATATAAAGTGTTGC+AGG | - | chr2.3:50772985-50773004 | MS.gene56169:CDS | 25.0% |
| !!! | TCCAAATTGTTTTTAACAGA+AGG | + | chr2.3:50770261-50770280 | None:intergenic | 25.0% |
| !!! | TTGAGCTTCTTTTTCATAAT+TGG | + | chr2.3:50772111-50772130 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGATGTTCTTTTG+AGG | - | chr2.3:50770457-50770476 | MS.gene56169:CDS | 25.0% |
| !!! | TTTTTCAAACAAGTTTAGAG+AGG | - | chr2.3:50773971-50773990 | MS.gene56169:CDS | 25.0% |
| AAAAACTTTGATTCCAGCAT+AGG | + | chr2.3:50772038-50772057 | None:intergenic | 30.0% | |
| AAATGGTTATGACTAAGAGA+AGG | + | chr2.3:50770327-50770346 | None:intergenic | 30.0% | |
| AACCATAAGAACTCAAGAAA+TGG | + | chr2.3:50770344-50770363 | None:intergenic | 30.0% | |
| AACCATTTCTTGAGTTCTTA+TGG | - | chr2.3:50770339-50770358 | MS.gene56169:CDS | 30.0% | |
| AATTGTTGTCAATTGTCGTA+TGG | + | chr2.3:50771247-50771266 | None:intergenic | 30.0% | |
| AATTTGTGGCTAAGTATGTA+CGG | - | chr2.3:50771520-50771539 | MS.gene56169:intron | 30.0% | |
| ACTAGGATACGATAAATGTA+TGG | + | chr2.3:50772373-50772392 | None:intergenic | 30.0% | |
| ATAAGGTTTGAACTATAAGC+TGG | + | chr2.3:50772752-50772771 | None:intergenic | 30.0% | |
| ATAGTTCAAACCTTATACCT+CGG | - | chr2.3:50772756-50772775 | MS.gene56169:intron | 30.0% | |
| ATATTCATATTGTCCAATGG+TGG | - | chr2.3:50773367-50773386 | MS.gene56169:CDS | 30.0% | |
| ATCATTGAAGTTGAACTCAA+TGG | + | chr2.3:50772807-50772826 | None:intergenic | 30.0% | |
| ATGATTCTGTTGGGAAAAAA+AGG | - | chr2.3:50773110-50773129 | MS.gene56169:CDS | 30.0% | |
| ATGTTTGAGAAATGGCTAAA+AGG | - | chr2.3:50773946-50773965 | MS.gene56169:CDS | 30.0% | |
| CAAAACCTCTTTAGACATTA+CGG | - | chr2.3:50771651-50771670 | MS.gene56169:intron | 30.0% | |
| CAAGGATTGAAGAAAATGAA+GGG | - | chr2.3:50773566-50773585 | MS.gene56169:CDS | 30.0% | |
| CTAACAACATGTTTGAGAAA+TGG | - | chr2.3:50773938-50773957 | MS.gene56169:CDS | 30.0% | |
| CTAGTTATCAAAGTTACATG+AGG | - | chr2.3:50770877-50770896 | MS.gene56169:CDS | 30.0% | |
| CTTGTCAAATCACTTGAAAT+TGG | + | chr2.3:50773706-50773725 | None:intergenic | 30.0% | |
| GAAGAAATAGGAAAGTTGTT+TGG | - | chr2.3:50770810-50770829 | MS.gene56169:CDS | 30.0% | |
| GACAAAGATGTTTATGTCAA+GGG | - | chr2.3:50773822-50773841 | MS.gene56169:CDS | 30.0% | |
| GATACAGTTTCTTTAACTGA+AGG | - | chr2.3:50770510-50770529 | MS.gene56169:CDS | 30.0% | |
| GATTATGTTGTGGAAGAAAT+AGG | - | chr2.3:50770798-50770817 | MS.gene56169:CDS | 30.0% | |
| GATTTGACAAGAGAAACATT+AGG | - | chr2.3:50773715-50773734 | MS.gene56169:CDS | 30.0% | |
| GCATTTCTTAAAGAAGAAGA+TGG | + | chr2.3:50769916-50769935 | None:intergenic | 30.0% | |
| GTTAGTGATTATGTTGCATT+AGG | - | chr2.3:50770693-50770712 | MS.gene56169:CDS | 30.0% | |
| TACAAGGAAATGATTCTGTT+GGG | - | chr2.3:50773101-50773120 | MS.gene56169:CDS | 30.0% | |
| TCAACTTTAACACTCAAAAG+TGG | + | chr2.3:50770162-50770181 | None:intergenic | 30.0% | |
| TCATAACTCTACTAACAGAA+GGG | + | chr2.3:50770218-50770237 | None:intergenic | 30.0% | |
| TGACAAAGATGTTTATGTCA+AGG | - | chr2.3:50773821-50773840 | MS.gene56169:CDS | 30.0% | |
| TGGTAAAGAGGATAGAAAAT+GGG | - | chr2.3:50774041-50774060 | MS.gene56169:CDS | 30.0% | |
| TGTTTCAGATCAGAAAAAGA+TGG | - | chr2.3:50772940-50772959 | MS.gene56169:CDS | 30.0% | |
| TTACAAGGAAATGATTCTGT+TGG | - | chr2.3:50773100-50773119 | MS.gene56169:CDS | 30.0% | |
| TTAGCAAGGTAAAAATTCCA+AGG | - | chr2.3:50773548-50773567 | MS.gene56169:CDS | 30.0% | |
| TTCTTGAGTTCTTATGGTTA+TGG | - | chr2.3:50770345-50770364 | MS.gene56169:CDS | 30.0% | |
| ! | ACTCATTTTGTGAAGTTTCA+TGG | - | chr2.3:50770594-50770613 | MS.gene56169:CDS | 30.0% |
| ! | AGAGATTGTTGATTATGTTG+TGG | - | chr2.3:50770788-50770807 | MS.gene56169:CDS | 30.0% |
| ! | AGCAAGCATTTTCCTTAAAA+GGG | + | chr2.3:50773305-50773324 | None:intergenic | 30.0% |
| ! | AGTTGAAATGTTTTCTCAGA+TGG | - | chr2.3:50773168-50773187 | MS.gene56169:CDS | 30.0% |
| ! | ATTGCAAAGTTTGGAACTTT+AGG | - | chr2.3:50773337-50773356 | MS.gene56169:CDS | 30.0% |
| ! | GAATTTGAGATTGCAAAGTT+TGG | - | chr2.3:50773328-50773347 | MS.gene56169:CDS | 30.0% |
| ! | GGTTGATTCAAAATCATCAA+AGG | - | chr2.3:50773057-50773076 | MS.gene56169:CDS | 30.0% |
| ! | TCATCAAAATCACCTTGTTT+AGG | - | chr2.3:50773496-50773515 | MS.gene56169:CDS | 30.0% |
| ! | TTCACATGATGTTTTGTACA+AGG | - | chr2.3:50771675-50771694 | MS.gene56169:intron | 30.0% |
| !! | AAAGTTTTTCAGTAACAAGG+AGG | - | chr2.3:50772049-50772068 | MS.gene56169:intron | 30.0% |
| !! | AGCTTCTTTTTCATAATTGG+AGG | + | chr2.3:50772108-50772127 | None:intergenic | 30.0% |
| !! | GACTCAGAAGATTTTAAGAA+AGG | + | chr2.3:50770417-50770436 | None:intergenic | 30.0% |
| !! | TACCAACTTTTGAGAATCAA+TGG | - | chr2.3:50770913-50770932 | MS.gene56169:CDS | 30.0% |
| !! | TATTAGAGTGTTGAAAAGGA+AGG | - | chr2.3:50770671-50770690 | MS.gene56169:CDS | 30.0% |
| !!! | GATTTTGATGATGATGAAGA+TGG | + | chr2.3:50773487-50773506 | None:intergenic | 30.0% |
| !!! | TGAGTTTTTTTCATCTCATC+AGG | + | chr2.3:50770579-50770598 | None:intergenic | 30.0% |
| !!! | TTGGTTGAAAATGCTGATTT+TGG | - | chr2.3:50773274-50773293 | MS.gene56169:CDS | 30.0% |
| AAACCAAGTAACAACAACCT+TGG | - | chr2.3:50772841-50772860 | MS.gene56169:intron | 35.0% | |
| AAAGGTGAAGTAGTAGTTGT+TGG | + | chr2.3:50770024-50770043 | None:intergenic | 35.0% | |
| AACTATGATTGTTGCTCCAA+TGG | + | chr2.3:50772616-50772635 | None:intergenic | 35.0% | |
| AAGAAGAACACTGTGATAGT+TGG | - | chr2.3:50770486-50770505 | MS.gene56169:CDS | 35.0% | |
| AAGATACTACTACCTTGGTT+TGG | + | chr2.3:50772683-50772702 | None:intergenic | 35.0% | |
| AAGGGTAAAAGAGTCATTTG+AGG | - | chr2.3:50773840-50773859 | MS.gene56169:CDS | 35.0% | |
| ACAAACAACCTCAAAACCAT+TGG | - | chr2.3:50772597-50772616 | MS.gene56169:intron | 35.0% | |
| ACAAGTTTAGAGAGGGTTAA+TGG | - | chr2.3:50773979-50773998 | MS.gene56169:CDS | 35.0% | |
| ACGCATTAATTAACCTAGAC+CGG | + | chr2.3:50772308-50772327 | None:intergenic | 35.0% | |
| AGAAGATGAAGACTATGATG+AGG | - | chr2.3:50773669-50773688 | MS.gene56169:CDS | 35.0% | |
| AGGATAGAAAATGGGATAGT+GGG | - | chr2.3:50774049-50774068 | MS.gene56169:CDS | 35.0% | |
| AGTAACAACAACCTTGGAAT+TGG | - | chr2.3:50772847-50772866 | MS.gene56169:intron | 35.0% | |
| ATAAGGGTAGATCTTTGCAT+TGG | + | chr2.3:50772639-50772658 | None:intergenic | 35.0% | |
| ATGAGTGCATTAGAAAGTGA+AGG | + | chr2.3:50770066-50770085 | None:intergenic | 35.0% | |
| ATGTCTTCCGTGAATCATTT+CGG | - | chr2.3:50771157-50771176 | MS.gene56169:CDS | 35.0% | |
| CAAAACAAAGTGAAGCAGAA+AGG | + | chr2.3:50771621-50771640 | None:intergenic | 35.0% | |
| CCAAGGATTGAAGAAAATGA+AGG | - | chr2.3:50773565-50773584 | MS.gene56169:CDS | 35.0% | |
| CTCATAACTCTACTAACAGA+AGG | + | chr2.3:50770219-50770238 | None:intergenic | 35.0% | |
| GAAGATGAAGACTATGATGA+GGG | - | chr2.3:50773670-50773689 | MS.gene56169:CDS | 35.0% | |
| GATAAGGTGATAGAGGAAAT+TGG | - | chr2.3:50773895-50773914 | MS.gene56169:CDS | 35.0% | |
| GATGGTGATAACTCAAAAGT+TGG | + | chr2.3:50773469-50773488 | None:intergenic | 35.0% | |
| GATTATGTTGCATTAGGTGT+TGG | - | chr2.3:50770699-50770718 | MS.gene56169:CDS | 35.0% | |
| GGAACAAGAATGGTAAGATT+TGG | - | chr2.3:50770841-50770860 | MS.gene56169:CDS | 35.0% | |
| GTGGTAAAGAGGATAGAAAA+TGG | - | chr2.3:50774040-50774059 | MS.gene56169:CDS | 35.0% | |
| GTTTGAACTATAAGCTGGTT+TGG | + | chr2.3:50772747-50772766 | None:intergenic | 35.0% | |
| GTTTGAGTCTTCATTCATCA+AGG | - | chr2.3:50770973-50770992 | MS.gene56169:CDS | 35.0% | |
| TAGTTCAATAGCAGAAGCTT+TGG | - | chr2.3:50773036-50773055 | MS.gene56169:CDS | 35.0% | |
| TCTATGTTGGAGATTTGAAG+TGG | - | chr2.3:50770730-50770749 | MS.gene56169:CDS | 35.0% | |
| TGAATCCGTAATGTCTAAAG+AGG | + | chr2.3:50771659-50771678 | None:intergenic | 35.0% | |
| TGATAGAGGAAATTGGTGTA+GGG | - | chr2.3:50773902-50773921 | MS.gene56169:CDS | 35.0% | |
| TGTACAAGATAAGGTGATAG+AGG | - | chr2.3:50773888-50773907 | MS.gene56169:CDS | 35.0% | |
| TGTCAATGAAGATCAGAAGA+AGG | - | chr2.3:50773396-50773415 | MS.gene56169:CDS | 35.0% | |
| TTATGGTCCGAAATGATTCA+CGG | + | chr2.3:50771167-50771186 | None:intergenic | 35.0% | |
| TTGGAATTGGATTCTCTCAA+GGG | - | chr2.3:50772860-50772879 | MS.gene56169:intron | 35.0% | |
| ! | AGTCATTTGAGGAGGTTTTT+GGG | - | chr2.3:50773851-50773870 | MS.gene56169:CDS | 35.0% |
| ! | ATTCCAAGGTTGTTGTTACT+TGG | + | chr2.3:50772847-50772866 | None:intergenic | 35.0% |
| ! | CAGCAAGCATTTTCCTTAAA+AGG | + | chr2.3:50773306-50773325 | None:intergenic | 35.0% |
| ! | CCAACAACCTTTTCAGAAAA+GGG | + | chr2.3:50773223-50773242 | None:intergenic | 35.0% |
| ! | CCTTCATTTTCTTCAATCCT+TGG | + | chr2.3:50773568-50773587 | None:intergenic | 35.0% |
| ! | GAAAGTTGTTTGGTGAAGAA+GGG | - | chr2.3:50770820-50770839 | MS.gene56169:CDS | 35.0% |
| ! | TCTTTAACTGAAGGACTAGT+TGG | - | chr2.3:50770519-50770538 | MS.gene56169:CDS | 35.0% |
| ! | TTACATGAGGTGTCAAATGA+GGG | - | chr2.3:50770890-50770909 | MS.gene56169:CDS | 35.0% |
| !! | AAAAGCATTGTTGGTTGGTA+AGG | - | chr2.3:50771574-50771593 | MS.gene56169:intron | 35.0% |
| !! | AAAATGGGATAGTGGGTTTA+TGG | - | chr2.3:50774056-50774075 | MS.gene56169:CDS | 35.0% |
| !! | AAATGGGATAGTGGGTTTAT+GGG | - | chr2.3:50774057-50774076 | MS.gene56169:CDS | 35.0% |
| !! | ACTGTTGATTTGAGATCAAC+CGG | - | chr2.3:50772286-50772305 | MS.gene56169:intron | 35.0% |
| !! | ATTTTGGTGACACCCTTTTA+AGG | - | chr2.3:50773290-50773309 | MS.gene56169:CDS | 35.0% |
| !! | CACCATTGATTCTCAAAAGT+TGG | + | chr2.3:50770918-50770937 | None:intergenic | 35.0% |
| !! | CCTTTTCTGAAAAGGTTGTT+GGG | - | chr2.3:50773221-50773240 | MS.gene56169:CDS | 35.0% |
| !! | GATATTGAACTTGGTGTATC+TGG | + | chr2.3:50772707-50772726 | None:intergenic | 35.0% |
| !! | GTTGGAGCTATTTTCTATGT+TGG | - | chr2.3:50770717-50770736 | MS.gene56169:CDS | 35.0% |
| !! | TGAACTTGACTTGTTTAGCA+AGG | - | chr2.3:50773534-50773553 | MS.gene56169:CDS | 35.0% |
| !! | TGGATAGTGGATGATAATGA+TGG | - | chr2.3:50770750-50770769 | MS.gene56169:CDS | 35.0% |
| !!! | GCTACTTGGTTGTTTTTACA+AGG | - | chr2.3:50773085-50773104 | MS.gene56169:CDS | 35.0% |
| !!! | GTTCCACTTTTTGTTCAACT+GGG | + | chr2.3:50772552-50772571 | None:intergenic | 35.0% |
| !!! | TGTTCCACTTTTTGTTCAAC+TGG | + | chr2.3:50772553-50772572 | None:intergenic | 35.0% |
| AACAGAAGGGTCATCAAGAA+TGG | + | chr2.3:50770205-50770224 | None:intergenic | 40.0% | |
| AGAAGAATCTGTTGCCTTCA+TGG | - | chr2.3:50772147-50772166 | MS.gene56169:intron | 40.0% | |
| AGCTCAAGCTCATCAAAGAA+GGG | - | chr2.3:50770101-50770120 | MS.gene56169:CDS | 40.0% | |
| AGTAGAGTTATGAGAGAAGC+TGG | - | chr2.3:50770225-50770244 | MS.gene56169:CDS | 40.0% | |
| AGTTTAGAGAGGGTTAATGG+TGG | - | chr2.3:50773982-50774001 | MS.gene56169:CDS | 40.0% | |
| ATGAAGGCAACAGATTCTTC+TGG | + | chr2.3:50772148-50772167 | None:intergenic | 40.0% | |
| ATTCTGGACTATATGGCAGA+AGG | - | chr2.3:50771544-50771563 | MS.gene56169:intron | 40.0% | |
| ATTGACATTACTGCCACCAT+TGG | + | chr2.3:50773383-50773402 | None:intergenic | 40.0% | |
| ATTGGATTCTCTCAAGGGTA+TGG | - | chr2.3:50772865-50772884 | MS.gene56169:intron | 40.0% | |
| CTAACTGTTTCACATTGCCA+TGG | + | chr2.3:50773019-50773038 | None:intergenic | 40.0% | |
| CTTGAGAGAATCCAATTCCA+AGG | + | chr2.3:50772861-50772880 | None:intergenic | 40.0% | |
| CTTGGAATTGGATTCTCTCA+AGG | - | chr2.3:50772859-50772878 | MS.gene56169:intron | 40.0% | |
| GAAGGATTCAGTGATGAAGT+TGG | - | chr2.3:50773414-50773433 | MS.gene56169:CDS | 40.0% | |
| GAGGATAGAAAATGGGATAG+TGG | - | chr2.3:50774048-50774067 | MS.gene56169:CDS | 40.0% | |
| GCAATAGCAGAATCAGTGTT+TGG | - | chr2.3:50773142-50773161 | MS.gene56169:CDS | 40.0% | |
| GCTAAGTATGTACGGTATTC+TGG | - | chr2.3:50771528-50771547 | MS.gene56169:intron | 40.0% | |
| GGTAAAAGAGTCATTTGAGG+AGG | - | chr2.3:50773843-50773862 | MS.gene56169:CDS | 40.0% | |
| GTAAAGACAACTCTTGCACT+TGG | - | chr2.3:50772902-50772921 | MS.gene56169:intron | 40.0% | |
| GTACGGTATTCTGGACTATA+TGG | - | chr2.3:50771537-50771556 | MS.gene56169:intron | 40.0% | |
| GTCATTTCCTTGTTCTTAGC+TGG | + | chr2.3:50773805-50773824 | None:intergenic | 40.0% | |
| GTGATAGAGGAAATTGGTGT+AGG | - | chr2.3:50773901-50773920 | MS.gene56169:CDS | 40.0% | |
| GTTTAGAGAGGGTTAATGGT+GGG | - | chr2.3:50773983-50774002 | MS.gene56169:CDS | 40.0% | |
| GTTTATACACTTTGTTGGGG+TGG | - | chr2.3:50774021-50774040 | MS.gene56169:CDS | 40.0% | |
| TCAAAGTCCAGCTAAGAACA+AGG | - | chr2.3:50773795-50773814 | MS.gene56169:CDS | 40.0% | |
| TCAAGAGCTCTACATTGAAG+AGG | + | chr2.3:50769970-50769989 | None:intergenic | 40.0% | |
| TGACCCAGTTGAACAAAAAG+TGG | - | chr2.3:50772546-50772565 | MS.gene56169:intron | 40.0% | |
| TTGATTCCAGCATAGGAGAT+GGG | + | chr2.3:50772031-50772050 | None:intergenic | 40.0% | |
| TTTAGAGAGGGTTAATGGTG+GGG | - | chr2.3:50773984-50774003 | MS.gene56169:CDS | 40.0% | |
| TTTGATTCCAGCATAGGAGA+TGG | + | chr2.3:50772032-50772051 | None:intergenic | 40.0% | |
| ! | CATCAAAGGAATGTGCTACT+TGG | - | chr2.3:50773071-50773090 | MS.gene56169:CDS | 40.0% |
| ! | CCCAACAACCTTTTCAGAAA+AGG | + | chr2.3:50773224-50773243 | None:intergenic | 40.0% |
| ! | GAGTCATTTGAGGAGGTTTT+TGG | - | chr2.3:50773850-50773869 | MS.gene56169:CDS | 40.0% |
| ! | GGAAAGTTGTTTGGTGAAGA+AGG | - | chr2.3:50770819-50770838 | MS.gene56169:CDS | 40.0% |
| ! | GTTAATGGTGGGGGTAAAAA+TGG | - | chr2.3:50773994-50774013 | MS.gene56169:CDS | 40.0% |
| ! | GTTACATGAGGTGTCAAATG+AGG | - | chr2.3:50770889-50770908 | MS.gene56169:CDS | 40.0% |
| ! | TCAATCTTGAAGCACTCTCT+AGG | - | chr2.3:50769823-50769842 | MS.gene56169:CDS | 40.0% |
| ! | TGGAGATTTGAAGTGGATAG+TGG | - | chr2.3:50770737-50770756 | MS.gene56169:CDS | 40.0% |
| ! | TTTGAGGTTGTTTGTTCTGG+TGG | + | chr2.3:50772592-50772611 | None:intergenic | 40.0% |
| !! | AGAGACACCCTTTTCTGAAA+AGG | - | chr2.3:50773213-50773232 | MS.gene56169:CDS | 40.0% |
| !! | CATTGTTGGTTGGTAAGGTA+AGG | - | chr2.3:50771579-50771598 | MS.gene56169:intron | 40.0% |
| !! | CCCTTTTCTGAAAAGGTTGT+TGG | - | chr2.3:50773220-50773239 | MS.gene56169:CDS | 40.0% |
| !! | CTGTGAAAAGCATTGTTGGT+TGG | - | chr2.3:50771569-50771588 | MS.gene56169:intron | 40.0% |
| !! | TACCTTGGTTTGGCCAATAA+GGG | + | chr2.3:50772673-50772692 | None:intergenic | 40.0% |
| !! | TTGTTGCTCCAATGGTTTTG+AGG | + | chr2.3:50772608-50772627 | None:intergenic | 40.0% |
| !!! | GGTTTTGAGGTTGTTTGTTC+TGG | + | chr2.3:50772595-50772614 | None:intergenic | 40.0% |
| ACATGCTGTGGTTGAAGCAA+AGG | + | chr2.3:50770042-50770061 | None:intergenic | 45.0% | |
| ACTTTGTTGGGGTGGTAAAG+AGG | - | chr2.3:50774029-50774048 | MS.gene56169:CDS | 45.0% | |
| CAAACCTTATACCTCGGTTC+CGG | - | chr2.3:50772762-50772781 | MS.gene56169:intron | 45.0% | |
| CTATGAGAGTGAAGCCATGA+AGG | + | chr2.3:50772164-50772183 | None:intergenic | 45.0% | |
| CTCAAGCTCATCAAAGAAGG+GGG | - | chr2.3:50770103-50770122 | MS.gene56169:CDS | 45.0% | |
| CTGGCAAGATACTACTACCT+TGG | + | chr2.3:50772688-50772707 | None:intergenic | 45.0% | |
| CTTCAAGATTGAAGCAGCCT+CGG | + | chr2.3:50769815-50769834 | None:intergenic | 45.0% | |
| GAAAGTGAAGGAACATGCTG+TGG | + | chr2.3:50770054-50770073 | None:intergenic | 45.0% | |
| GAGCTCAAGCTCATCAAAGA+AGG | - | chr2.3:50770100-50770119 | MS.gene56169:CDS | 45.0% | |
| GAGCTCTACATTGAAGAGGA+TGG | + | chr2.3:50769966-50769985 | None:intergenic | 45.0% | |
| GCTCAAGCTCATCAAAGAAG+GGG | - | chr2.3:50770102-50770121 | MS.gene56169:CDS | 45.0% | |
| GGTGAAGAAGGGAACAAGAA+TGG | - | chr2.3:50770831-50770850 | MS.gene56169:CDS | 45.0% | |
| TACCCTTATTGGCCAAACCA+AGG | - | chr2.3:50772668-50772687 | MS.gene56169:intron | 45.0% | |
| TCAAAACCCATCTCCTATGC+TGG | - | chr2.3:50772022-50772041 | MS.gene56169:intron | 45.0% | |
| TGTTGCAGGAGAATGTTCCA+TGG | - | chr2.3:50772999-50773018 | MS.gene56169:CDS | 45.0% | |
| TTAGAGAGGGTTAATGGTGG+GGG | - | chr2.3:50773985-50774004 | MS.gene56169:CDS | 45.0% | |
| ! | GAAGAGGTGTGATTTGTGCA+TGG | + | chr2.3:50769867-50769886 | None:intergenic | 45.0% |
| ! | GATTTGAGATCAACCGGTCT+AGG | - | chr2.3:50772292-50772311 | MS.gene56169:intron | 45.0% |
| !! | CTACCTTGGTTTGGCCAATA+AGG | + | chr2.3:50772674-50772693 | None:intergenic | 45.0% |
| !! | GGCACTGTGAAAAGCATTGT+TGG | - | chr2.3:50771565-50771584 | MS.gene56169:intron | 45.0% |
| !! | TAAATTATTTAAAAATGATT+CGG | + | chr2.3:50772265-50772284 | None:intergenic | 5.0% |
| AGTGTAGCAGCAACGTGAAG+AGG | + | chr2.3:50769883-50769902 | None:intergenic | 50.0% | |
| CAAGCTGTTCCTGTTCCATC+TGG | - | chr2.3:50770942-50770961 | MS.gene56169:CDS | 50.0% | |
| CTAGGCTTAGCACGTAGAAG+AGG | - | chr2.3:50769841-50769860 | MS.gene56169:CDS | 50.0% | |
| CTCAAACCAAGTCCACCAGA+TGG | + | chr2.3:50770960-50770979 | None:intergenic | 50.0% | |
| GAGGAAATTGGTGTAGGGTG+TGG | - | chr2.3:50773907-50773926 | MS.gene56169:CDS | 50.0% | |
| GGCAACAGATTCTTCTGGTC+TGG | + | chr2.3:50772143-50772162 | None:intergenic | 50.0% | |
| ! | TAGCACAGAAGCACGTCAGA+AGG | - | chr2.3:50772181-50772200 | MS.gene56169:intron | 50.0% |
| CCAAGTCCACCAGATGGAAC+AGG | + | chr2.3:50770954-50770973 | None:intergenic | 55.0% | |
| GCAAGAGACACTAACAGCCG+AGG | - | chr2.3:50769795-50769814 | MS.gene56169:CDS | 55.0% | |
| GCTGTTCCTGTTCCATCTGG+TGG | - | chr2.3:50770945-50770964 | MS.gene56169:CDS | 55.0% | |
| GTGGTTGCTGCTGCTGTTGT+TGG | + | chr2.3:50770143-50770162 | None:intergenic | 55.0% | |
| TGCATGATTGTTGTCCGCGC+CGG | + | chr2.3:50772784-50772803 | None:intergenic | 55.0% | |
| !! | CCTGTTCCATCTGGTGGACT+TGG | - | chr2.3:50770951-50770970 | MS.gene56169:CDS | 55.0% |
| CTTATACCTCGGTTCCGGCG+CGG | - | chr2.3:50772767-50772786 | MS.gene56169:intron | 60.0% | |
| CGCGCCGGAACCGAGGTATA+AGG | + | chr2.3:50772769-50772788 | None:intergenic | 65.0% | |
| TGTTGTCCGCGCCGGAACCG+AGG | + | chr2.3:50772776-50772795 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 50769772 | 50774128 | 50769772 | ID=MS.gene56169 |
| chr2.3 | mRNA | 50769772 | 50774128 | 50769772 | ID=MS.gene56169.t1;Parent=MS.gene56169 |
| chr2.3 | exon | 50772906 | 50774128 | 50772906 | ID=MS.gene56169.t1.exon1;Parent=MS.gene56169.t1 |
| chr2.3 | CDS | 50772906 | 50774128 | 50772906 | ID=cds.MS.gene56169.t1;Parent=MS.gene56169.t1 |
| chr2.3 | exon | 50771698 | 50771905 | 50771698 | ID=MS.gene56169.t1.exon2;Parent=MS.gene56169.t1 |
| chr2.3 | CDS | 50771698 | 50771905 | 50771698 | ID=cds.MS.gene56169.t1;Parent=MS.gene56169.t1 |
| chr2.3 | exon | 50769772 | 50771361 | 50769772 | ID=MS.gene56169.t1.exon3;Parent=MS.gene56169.t1 |
| chr2.3 | CDS | 50769772 | 50771361 | 50769772 | ID=cds.MS.gene56169.t1;Parent=MS.gene56169.t1 |
| Gene Sequence |
| Protein sequence |
