Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07723.t1 | XP_003595094.2 | 95.6 | 1009 | 41 | 3 | 1 | 1006 | 1 | 1009 | 0.00E+00 | 1867.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07723.t1 | Q9SZR3 | 42.4 | 1083 | 471 | 36 | 1 | 1000 | 1 | 1013 | 5.8e-178 | 626.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07723.t1 | G7IGA7 | 95.6 | 1009 | 41 | 3 | 1 | 1006 | 1 | 1009 | 0.0e+00 | 1867.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049350 | MS.gene07723 | 0.825162 | 5.45E-54 | -1.69E-46 |
| MS.gene049418 | MS.gene07723 | 0.810956 | 8.91E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene07723 | 0.861816 | 7.86E-64 | -1.69E-46 |
| MS.gene049807 | MS.gene07723 | 0.837339 | 5.51E-57 | -1.69E-46 |
| MS.gene051018 | MS.gene07723 | 0.839837 | 1.25E-57 | -1.69E-46 |
| MS.gene051201 | MS.gene07723 | 0.821928 | 3.11E-53 | -1.69E-46 |
| MS.gene051279 | MS.gene07723 | 0.816837 | 4.50E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene07723 | 0.845873 | 3.10E-59 | -1.69E-46 |
| MS.gene051664 | MS.gene07723 | 0.826218 | 3.06E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene07723 | 0.809996 | 1.44E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene07723 | 0.841116 | 5.78E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene07723 | 0.810069 | 1.38E-50 | -1.69E-46 |
| MS.gene052000 | MS.gene07723 | 0.8106 | 1.06E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene07723 | 0.807511 | 4.88E-50 | -1.69E-46 |
| MS.gene052151 | MS.gene07723 | 0.817201 | 3.73E-52 | -1.69E-46 |
| MS.gene052155 | MS.gene07723 | -0.823102 | 1.66E-53 | -1.69E-46 |
| MS.gene052628 | MS.gene07723 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene07723 | 0.801963 | 7.03E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene07723 | 0.843752 | 1.15E-58 | -1.69E-46 |
| MS.gene053536 | MS.gene07723 | 0.87611 | 1.81E-68 | -1.69E-46 |
| MS.gene053538 | MS.gene07723 | 0.876588 | 1.24E-68 | -1.69E-46 |
| MS.gene053540 | MS.gene07723 | 0.804581 | 2.02E-49 | -1.69E-46 |
| MS.gene053945 | MS.gene07723 | 0.803109 | 4.08E-49 | -1.69E-46 |
| MS.gene054142 | MS.gene07723 | 0.804707 | 1.90E-49 | -1.69E-46 |
| MS.gene054557 | MS.gene07723 | 0.802683 | 5.00E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene07723 | 0.840068 | 1.09E-57 | -1.69E-46 |
| MS.gene055083 | MS.gene07723 | 0.824748 | 6.82E-54 | -1.69E-46 |
| MS.gene055465 | MS.gene07723 | 0.843053 | 1.77E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene07723 | 0.810171 | 1.32E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene07723 | 0.860887 | 1.51E-63 | -1.69E-46 |
| MS.gene055580 | MS.gene07723 | -0.816057 | 6.73E-52 | -1.69E-46 |
| MS.gene056169 | MS.gene07723 | 0.839207 | 1.82E-57 | -1.69E-46 |
| MS.gene056228 | MS.gene07723 | 0.801738 | 7.82E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene07723 | 0.801869 | 7.34E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene07723 | 0.804745 | 1.86E-49 | -1.69E-46 |
| MS.gene057082 | MS.gene07723 | 0.844602 | 6.83E-59 | -1.69E-46 |
| MS.gene057132 | MS.gene07723 | 0.824489 | 7.85E-54 | -1.69E-46 |
| MS.gene057294 | MS.gene07723 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene058087 | MS.gene07723 | 0.804888 | 1.74E-49 | -1.69E-46 |
| MS.gene058210 | MS.gene07723 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene07723 | 0.825662 | 4.15E-54 | -1.69E-46 |
| MS.gene05894 | MS.gene07723 | 0.888697 | 4.69E-73 | -1.69E-46 |
| MS.gene059015 | MS.gene07723 | 0.802864 | 4.58E-49 | -1.69E-46 |
| MS.gene059424 | MS.gene07723 | 0.864325 | 1.32E-64 | -1.69E-46 |
| MS.gene059426 | MS.gene07723 | 0.805021 | 1.63E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene07723 | 0.819264 | 1.27E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene07723 | 0.851747 | 7.25E-61 | -1.69E-46 |
| MS.gene060962 | MS.gene07723 | 0.804057 | 2.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07723.t1 | MTR_2g038200 | 96.928 | 1009 | 28 | 3 | 1 | 1006 | 1 | 1009 | 0.0 | 2018 |
| MS.gene07723.t1 | MTR_4g127290 | 52.276 | 637 | 214 | 20 | 397 | 1006 | 247 | 820 | 0.0 | 549 |
| MS.gene07723.t1 | MTR_4g127290 | 62.097 | 248 | 54 | 8 | 1 | 212 | 1 | 244 | 4.08e-67 | 241 |
| MS.gene07723.t1 | MTR_4g129230 | 30.483 | 1076 | 544 | 42 | 1 | 964 | 1 | 984 | 1.02e-109 | 365 |
| MS.gene07723.t1 | MTR_1g090640 | 40.607 | 527 | 252 | 17 | 1 | 500 | 1 | 493 | 1.90e-103 | 343 |
| MS.gene07723.t1 | MTR_1g057150 | 40.797 | 527 | 238 | 17 | 1 | 500 | 1 | 480 | 8.65e-101 | 335 |
| MS.gene07723.t1 | MTR_5g071060 | 26.426 | 999 | 528 | 39 | 1 | 863 | 1 | 928 | 2.71e-44 | 174 |
| MS.gene07723.t1 | MTR_5g071060 | 26.738 | 1021 | 530 | 43 | 1 | 863 | 1 | 961 | 9.97e-44 | 173 |
| MS.gene07723.t1 | MTR_3g464150 | 30.686 | 554 | 280 | 23 | 1 | 498 | 1 | 506 | 1.27e-35 | 147 |
| MS.gene07723.t1 | MTR_3g070850 | 33.094 | 417 | 218 | 14 | 1 | 397 | 1 | 376 | 4.14e-34 | 142 |
| MS.gene07723.t1 | MTR_4g109450 | 30.469 | 256 | 143 | 9 | 26 | 280 | 20 | 241 | 6.90e-18 | 89.7 |
| MS.gene07723.t1 | MTR_4g109450 | 30.469 | 256 | 143 | 9 | 26 | 280 | 20 | 241 | 1.14e-17 | 89.0 |
| MS.gene07723.t1 | MTR_1384s0010 | 52.632 | 76 | 30 | 3 | 52 | 124 | 32 | 104 | 2.37e-14 | 70.5 |
| MS.gene07723.t1 | MTR_1183s0010 | 45.361 | 97 | 47 | 3 | 86 | 179 | 16 | 109 | 7.02e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07723.t1 | AT4G29920 | 42.318 | 1087 | 469 | 39 | 1 | 1000 | 1 | 1016 | 0.0 | 664 |
| MS.gene07723.t1 | AT4G29920 | 42.134 | 1087 | 468 | 39 | 1 | 1000 | 1 | 1013 | 0.0 | 657 |
| MS.gene07723.t1 | AT5G57130 | 41.727 | 1112 | 454 | 47 | 1 | 1003 | 1 | 1027 | 0.0 | 632 |
| MS.gene07723.t1 | AT3G52490 | 40.812 | 517 | 235 | 14 | 1 | 496 | 1 | 467 | 9.18e-105 | 346 |
| MS.gene07723.t1 | AT5G57710 | 33.414 | 829 | 415 | 30 | 1 | 758 | 1 | 763 | 2.17e-101 | 341 |
| MS.gene07723.t1 | AT4G30350 | 38.148 | 540 | 256 | 17 | 1 | 498 | 1 | 504 | 3.88e-79 | 278 |
| MS.gene07723.t1 | AT2G29970 | 27.014 | 1055 | 584 | 45 | 1 | 962 | 1 | 962 | 3.77e-55 | 208 |
| MS.gene07723.t1 | AT1G07200 | 27.189 | 868 | 458 | 34 | 1 | 779 | 1 | 783 | 3.46e-46 | 180 |
| MS.gene07723.t1 | AT2G40130 | 31.655 | 417 | 232 | 16 | 1 | 397 | 1 | 384 | 5.51e-41 | 164 |
| MS.gene07723.t1 | AT2G40130 | 31.655 | 417 | 232 | 16 | 1 | 397 | 1 | 384 | 6.63e-41 | 163 |
| MS.gene07723.t1 | AT1G74310 | 27.344 | 256 | 151 | 9 | 26 | 280 | 20 | 241 | 2.04e-15 | 81.6 |
| MS.gene07723.t1 | AT1G74310 | 27.344 | 256 | 151 | 9 | 26 | 280 | 20 | 241 | 2.56e-15 | 81.3 |
Find 155 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAATTGTTAACTACTTAA+TGG | 0.116030 | 2.4:-51337278 | MS.gene07723:CDS |
| ATAATTCATCATACCCTTAT+TGG | 0.138198 | 2.4:-51338722 | MS.gene07723:CDS |
| AAAATGGGATAGTGGGTTTA+TGG | 0.183846 | 2.4:-51337323 | MS.gene07723:CDS |
| CTTGTCAAATCACTTGAAAT+TGG | 0.210696 | 2.4:+51337676 | None:intergenic |
| CTACCTTGGTTTGGCCAATA+AGG | 0.218068 | 2.4:+51338708 | None:intergenic |
| AGCACATTCCTTTGATGATT+TGG | 0.220493 | 2.4:+51338314 | None:intergenic |
| CAATGAAAAGTTTGTTGTTT+TGG | 0.224683 | 2.4:-51338124 | MS.gene07723:CDS |
| GATATTGAACTTGGTGTATC+TGG | 0.233918 | 2.4:+51338675 | None:intergenic |
| CCATTAAGTAGTTAACAATT+TGG | 0.247388 | 2.4:+51337278 | None:intergenic |
| TAAGGGTATGATGAATTATA+AGG | 0.279485 | 2.4:+51338726 | None:intergenic |
| ATTGCAAAGTTTGGAACTTT+AGG | 0.282514 | 2.4:-51338042 | MS.gene07723:CDS |
| ACAAGTTTAGAGAGGGTTAA+TGG | 0.285676 | 2.4:-51337400 | MS.gene07723:CDS |
| AGAAGAATCTGTTGCCTTCA+TGG | 0.287597 | 2.4:-51339327 | MS.gene07723:CDS |
| CTTGGAGTTGGATTCTCTTA+AGG | 0.288171 | 2.4:-51338520 | MS.gene07723:CDS |
| TTCTTTGAAGTATATGAAAA+AGG | 0.292144 | 2.4:-51340845 | MS.gene07723:CDS |
| CCTGTTCCATCTGGTGGACT+TGG | 0.302111 | 2.4:-51340523 | MS.gene07723:CDS |
| TATAGTTTATACACTTTGTT+GGG | 0.306813 | 2.4:-51337362 | MS.gene07723:CDS |
| GAAATCTTCTGAGTCTAATA+AGG | 0.315204 | 2.4:-51341052 | MS.gene07723:CDS |
| GATTATGTTGTGGAAGAAAT+AGG | 0.322451 | 2.4:-51340676 | MS.gene07723:CDS |
| GTCATTTCCTTGTTCTTAGC+TGG | 0.323821 | 2.4:+51337577 | None:intergenic |
| TCATCAAAATCACCTTGTTT+AGG | 0.334064 | 2.4:-51337883 | MS.gene07723:CDS |
| TTGGAGTTGGATTCTCTTAA+GGG | 0.334465 | 2.4:-51338519 | MS.gene07723:CDS |
| GGAACAAGAATGGTAAGATT+TGG | 0.338899 | 2.4:-51340633 | MS.gene07723:CDS |
| GTTAGTGATTATGTTGCATT+AGG | 0.341264 | 2.4:-51340781 | MS.gene07723:CDS |
| ATGTTTGAGAAATGGCTAAA+AGG | 0.352149 | 2.4:-51337433 | MS.gene07723:CDS |
| GATAAGGTGATAGAGGAAAT+TGG | 0.356476 | 2.4:-51337484 | MS.gene07723:CDS |
| CTAACAACATGTTTGAGAAA+TGG | 0.359340 | 2.4:-51337441 | MS.gene07723:CDS |
| AGTAGAGTTATGAGAGAAGC+TGG | 0.362568 | 2.4:-51341249 | MS.gene07723:CDS |
| GTGGTTGCTGCTGCTGTTGT+TGG | 0.363016 | 2.4:+51341334 | None:intergenic |
| AAATGGGATAGTGGGTTTAT+GGG | 0.369377 | 2.4:-51337322 | MS.gene07723:CDS |
| GGCAACAGATTCTTCTGGTC+TGG | 0.371234 | 2.4:+51339334 | None:intergenic |
| TACCTTGGTTTGGCCAATAA+GGG | 0.372431 | 2.4:+51338709 | None:intergenic |
| TTGGTTGAAAATGCTGATTT+TGG | 0.372782 | 2.4:-51338105 | MS.gene07723:CDS |
| GAATTTGAGATTGCAAAGTT+TGG | 0.378824 | 2.4:-51338051 | MS.gene07723:CDS |
| GTTTGAGCTATAAGCTGGTT+TGG | 0.382997 | 2.4:+51338635 | None:intergenic |
| CAAGCTGTTCCTGTTCCATC+TGG | 0.386300 | 2.4:-51340532 | MS.gene07723:CDS |
| GCAATTGCAGAATCAGTGTT+TGG | 0.389107 | 2.4:-51338237 | MS.gene07723:CDS |
| ACTCCAAGGTTGTTGTTACT+TGG | 0.405028 | 2.4:+51338535 | None:intergenic |
| CGCGACGGAATCGAGGTATA+AGG | 0.415499 | 2.4:+51338613 | None:intergenic |
| TGCAAGGAAATGATTCTGTT+GGG | 0.420831 | 2.4:-51338278 | MS.gene07723:CDS |
| GACTCAGAAGATTTCAAGAA+AGG | 0.424730 | 2.4:+51341060 | None:intergenic |
| GGAAAGTTGTTTGGTGAAGA+AGG | 0.427180 | 2.4:-51340655 | MS.gene07723:CDS |
| TCATATATATAAAGTGTTGC+AGG | 0.428362 | 2.4:-51338394 | MS.gene07723:CDS |
| GTGGTAAAGAGGATAGAAAA+TGG | 0.429390 | 2.4:-51337339 | MS.gene07723:CDS |
| CATCAAAGGAATGTGCTACT+TGG | 0.430549 | 2.4:-51338308 | MS.gene07723:CDS |
| CACCATTGATTCTCAAAAGT+TGG | 0.432170 | 2.4:+51340559 | None:intergenic |
| TAGTTCAATAGCAGAAGCTT+TGG | 0.437063 | 2.4:-51338343 | MS.gene07723:CDS |
| TGGAGATTTGAAGTGGATAG+TGG | 0.446714 | 2.4:-51340737 | MS.gene07723:CDS |
| GAAGGATTCAGTGATGAAGT+TGG | 0.452059 | 2.4:-51337965 | MS.gene07723:CDS |
| GAGGATAGAAAATGGGATAG+TGG | 0.454439 | 2.4:-51337331 | MS.gene07723:CDS |
| GTATAGTTTATACACTTTGT+TGG | 0.454781 | 2.4:-51337363 | MS.gene07723:CDS |
| CAAATTCTCAATTGAGTCTA+GGG | 0.457600 | 2.4:+51337618 | None:intergenic |
| GTTGGATTCTCTTAAGGGTA+TGG | 0.458957 | 2.4:-51338514 | MS.gene07723:CDS |
| AACAGAAGGGTCATCAAGAA+TGG | 0.461745 | 2.4:+51341272 | None:intergenic |
| GTGATAGAGGAAATTGGTGT+AGG | 0.463249 | 2.4:-51337478 | MS.gene07723:CDS |
| TTGCAAGGAAATGATTCTGT+TGG | 0.465938 | 2.4:-51338279 | MS.gene07723:CDS |
| TGTACAAGATAAGGTGATAG+AGG | 0.466717 | 2.4:-51337491 | MS.gene07723:CDS |
| AAGATACTACTACCTTGGTT+TGG | 0.466919 | 2.4:+51338699 | None:intergenic |
| ATTGACAATACTGCCACCAT+TGG | 0.472037 | 2.4:+51337999 | None:intergenic |
| AAAATTTAGTGTACAAGATA+AGG | 0.472610 | 2.4:-51337500 | MS.gene07723:CDS |
| ACAAATTCTCAATTGAGTCT+AGG | 0.473106 | 2.4:+51337617 | None:intergenic |
| GATGGTGATAACTCAAAAGT+TGG | 0.473844 | 2.4:+51337913 | None:intergenic |
| TTTGAGGTTGTTTGTTCTGG+TGG | 0.473926 | 2.4:+51338790 | None:intergenic |
| TCAAAACCCATCTCCTATGC+TGG | 0.480572 | 2.4:-51339452 | MS.gene07723:CDS |
| CTGGCAAGATACTACTACCT+TGG | 0.481842 | 2.4:+51338694 | None:intergenic |
| AAGGGTATGATGAATTATAA+GGG | 0.483177 | 2.4:+51338727 | None:intergenic |
| ATCATTGAAGCTGAACTCAA+TGG | 0.484131 | 2.4:+51338575 | None:intergenic |
| AAAGGTGAAGTAGTAGTAGT+TGG | 0.486118 | 2.4:+51341453 | None:intergenic |
| ATAAGGTTTGAGCTATAAGC+TGG | 0.487817 | 2.4:+51338630 | None:intergenic |
| ATGAAGGCAACAGATTCTTC+TGG | 0.489093 | 2.4:+51339329 | None:intergenic |
| GCTGTTCCTGTTCCATCTGG+TGG | 0.490790 | 2.4:-51340529 | MS.gene07723:CDS |
| AACTATGATTGTTGCTCCAA+TGG | 0.491661 | 2.4:+51338766 | None:intergenic |
| CCAAGGATTGAAGAAAATGA+AGG | 0.493746 | 2.4:-51337814 | MS.gene07723:CDS |
| GAGCTCAAGCTCATCAAAGA+AGG | 0.494543 | 2.4:-51341374 | MS.gene07723:CDS |
| GTTTGAGTCTTCATTCATCA+AGG | 0.497632 | 2.4:-51340501 | MS.gene07723:intron |
| AGGATAGAAAATGGGATAGT+GGG | 0.497966 | 2.4:-51337330 | MS.gene07723:CDS |
| GATTTGACAAGAGAAACATT+AGG | 0.500539 | 2.4:-51337664 | MS.gene07723:CDS |
| ATGTTATTAGAGTGTTGAAA+AGG | 0.506322 | 2.4:-51340807 | MS.gene07723:CDS |
| GAAAGTTGTTTGGTGAAGAA+GGG | 0.506532 | 2.4:-51340654 | MS.gene07723:CDS |
| TCAACTTTAACACTCAAAAG+TGG | 0.507140 | 2.4:+51341315 | None:intergenic |
| ATAAGGGTAGATCTTTGCAT+TGG | 0.508400 | 2.4:+51338743 | None:intergenic |
| CCAAGTCCACCAGATGGAAC+AGG | 0.510866 | 2.4:+51340523 | None:intergenic |
| TCAATCTTGAAGCACTCTCT+AGG | 0.512470 | 2.4:-51341651 | MS.gene07723:CDS |
| GGTTGATTCCAAATCATCAA+AGG | 0.514321 | 2.4:-51338322 | MS.gene07723:CDS |
| TGGTAAAGAGGATAGAAAAT+GGG | 0.517397 | 2.4:-51337338 | MS.gene07723:CDS |
| AGTAACAACAACCTTGGAGT+TGG | 0.517705 | 2.4:-51338532 | MS.gene07723:CDS |
| TTGATTCCAGCATAGGAGAT+GGG | 0.522179 | 2.4:+51339446 | None:intergenic |
| ACTTTGTTGGGGTGGTAAAG+AGG | 0.524368 | 2.4:-51337350 | MS.gene07723:CDS |
| GAGGAAATTGGTGTAGGGTG+TGG | 0.525237 | 2.4:-51337472 | MS.gene07723:CDS |
| AGAAGATGAAGACTATGATG+AGG | 0.527194 | 2.4:-51337710 | MS.gene07723:CDS |
| GATACAGTTTCTTTAACTGA+AGG | 0.527453 | 2.4:-51340964 | MS.gene07723:CDS |
| TTTGATTCCAGCATAGGAGA+TGG | 0.528413 | 2.4:+51339445 | None:intergenic |
| GTTACATGAGGTGTCAAATG+AGG | 0.528631 | 2.4:-51340585 | MS.gene07723:CDS |
| TGGATAGTGGATGATAATGA+TGG | 0.530923 | 2.4:-51340724 | MS.gene07723:CDS |
| TATTAGAGTGTTGAAAAGGA+AGG | 0.532303 | 2.4:-51340803 | MS.gene07723:CDS |
| GCATTTCTTAAAGAAGAAGA+TGG | 0.533196 | 2.4:+51341561 | None:intergenic |
| GAAGATGAAGACTATGATGA+GGG | 0.534488 | 2.4:-51337709 | MS.gene07723:CDS |
| GAAGAAATAGGAAAGTTGTT+TGG | 0.534540 | 2.4:-51340664 | MS.gene07723:CDS |
| CTTGGAAATTCAACATTCAG+TGG | 0.534821 | 2.4:-51338459 | MS.gene07723:CDS |
| GACAAAGATGTTTATGTCAA+GGG | 0.535057 | 2.4:-51337557 | MS.gene07723:CDS |
| GTTTATACACTTTGTTGGGG+TGG | 0.536531 | 2.4:-51337358 | MS.gene07723:CDS |
| GTTTAGAGAGGGTTAATGGT+GGG | 0.538900 | 2.4:-51337396 | MS.gene07723:CDS |
| TGACAAAGATGTTTATGTCA+AGG | 0.539341 | 2.4:-51337558 | MS.gene07723:CDS |
| GATTATGTTGCATTAGGTGT+TGG | 0.539481 | 2.4:-51340775 | MS.gene07723:CDS |
| GGTGAAGAAGGGAACAAGAA+TGG | 0.542309 | 2.4:-51340643 | MS.gene07723:CDS |
| AGCTCAAGCTCATCAAAGAA+GGG | 0.544619 | 2.4:-51341373 | MS.gene07723:CDS |
| CTCATAACTCTACTAACAGA+AGG | 0.547154 | 2.4:+51341258 | None:intergenic |
| ACAAACAACCTCAAAACCAT+TGG | 0.547893 | 2.4:-51338782 | MS.gene07723:CDS |
| TAGCAAATTGTAATGCGCTC+AGG | 0.548048 | 2.4:-51341714 | None:intergenic |
| ATAATGAAAAGATTTGAAAG+AGG | 0.551174 | 2.4:-51340928 | MS.gene07723:CDS |
| GTAAAGACAACTCTTGCACT+TGG | 0.555155 | 2.4:-51338477 | MS.gene07723:CDS |
| TCAACAAAAGATATTGAACT+TGG | 0.555816 | 2.4:+51338666 | None:intergenic |
| GATTCTCTTAAGGGTATGGA+AGG | 0.560727 | 2.4:-51338510 | MS.gene07723:CDS |
| ATTTGAAAGAGGTGAAGTAC+CGG | 0.561365 | 2.4:-51340917 | MS.gene07723:CDS |
| AAACCAAGTAACAACAACCT+TGG | 0.563498 | 2.4:-51338538 | MS.gene07723:CDS |
| TTAGAGAGGGTTAATGGTGG+GGG | 0.564593 | 2.4:-51337394 | MS.gene07723:CDS |
| CTAACTGTTTCACATTGCCA+TGG | 0.568665 | 2.4:+51338363 | None:intergenic |
| TGATAGAGGAAATTGGTGTA+GGG | 0.570147 | 2.4:-51337477 | MS.gene07723:CDS |
| CTTCAAGATTGAAGCAGCCT+CGG | 0.571682 | 2.4:+51341662 | None:intergenic |
| CAAGGATTGAAGAAAATGAA+GGG | 0.573650 | 2.4:-51337813 | MS.gene07723:CDS |
| AGTGTAGCAGCAACGTGAAG+AGG | 0.575327 | 2.4:+51341594 | None:intergenic |
| TTTAGAGAGGGTTAATGGTG+GGG | 0.579670 | 2.4:-51337395 | MS.gene07723:CDS |
| TGTCAATGAAGATCAGAAGA+AGG | 0.579932 | 2.4:-51337983 | MS.gene07723:CDS |
| TGTTGTCCGCGACGGAATCG+AGG | 0.580825 | 2.4:+51338606 | None:intergenic |
| AAAATATTCATATTGTCCAA+TGG | 0.583934 | 2.4:-51338015 | MS.gene07723:CDS |
| TCTATGTTGGAGATTTGAAG+TGG | 0.587362 | 2.4:-51340744 | MS.gene07723:CDS |
| TGAACTTGACTTGTTTAGCA+AGG | 0.587561 | 2.4:-51337845 | MS.gene07723:CDS |
| ATAGTTTATACACTTTGTTG+GGG | 0.593962 | 2.4:-51337361 | MS.gene07723:CDS |
| GGTAAAAGAGTCATTTGAGG+AGG | 0.594837 | 2.4:-51337536 | MS.gene07723:CDS |
| TCAAGAGCTCTACATTGAAG+AGG | 0.598089 | 2.4:+51341507 | None:intergenic |
| CTATGAGACTGAAGCCATGA+AGG | 0.600566 | 2.4:+51339313 | None:intergenic |
| ACATGCTGTGGTTGAAGCAA+AGG | 0.603439 | 2.4:+51341435 | None:intergenic |
| TTACATGAGGTGTCAAATGA+GGG | 0.606608 | 2.4:-51340584 | MS.gene07723:CDS |
| AGAGATTGTTGATTATGTTG+TGG | 0.609416 | 2.4:-51340686 | MS.gene07723:CDS |
| AGTTTAGAGAGGGTTAATGG+TGG | 0.613323 | 2.4:-51337397 | MS.gene07723:CDS |
| CTAGGCTTAGCACGTAGAAG+AGG | 0.615440 | 2.4:-51341633 | MS.gene07723:CDS |
| CTCAAACCAAGTCCACCAGA+TGG | 0.615673 | 2.4:+51340517 | None:intergenic |
| ATGAGTGCATTAGAAAGTGA+AGG | 0.616666 | 2.4:+51341411 | None:intergenic |
| TAGCACACAAGCACGTCAGA+AGG | 0.619056 | 2.4:-51339293 | MS.gene07723:intron |
| CTTAAGAGAATCCAACTCCA+AGG | 0.619758 | 2.4:+51338521 | None:intergenic |
| AAGGGTAAAAGAGTCATTTG+AGG | 0.622133 | 2.4:-51337539 | MS.gene07723:CDS |
| GCTCAAGCTCATCAAAGAAG+GGG | 0.624859 | 2.4:-51341372 | MS.gene07723:CDS |
| TCAAAGTCCAGCTAAGAACA+AGG | 0.627959 | 2.4:-51337584 | MS.gene07723:CDS |
| AAATGGTTATGACTAAGAGA+AGG | 0.639749 | 2.4:+51341150 | None:intergenic |
| ATATTCATATTGTCCAATGG+TGG | 0.641525 | 2.4:-51338012 | MS.gene07723:CDS |
| TCATAACTCTACTAACAGAA+GGG | 0.643236 | 2.4:+51341259 | None:intergenic |
| TACCCTTATTGGCCAAACCA+AGG | 0.646502 | 2.4:-51338711 | MS.gene07723:CDS |
| GAAGAGGTGTGATTTGTGCA+TGG | 0.654069 | 2.4:+51341610 | None:intergenic |
| TGCATGATTGTTGTCCGCGA+CGG | 0.659605 | 2.4:+51338598 | None:intergenic |
| TGTTGCAGGAGAATGTTCCA+TGG | 0.660728 | 2.4:-51338380 | MS.gene07723:CDS |
| CTCAAGCTCATCAAAGAAGG+GGG | 0.661271 | 2.4:-51341371 | MS.gene07723:CDS |
| CTAGTTATCAAAGTTACATG+AGG | 0.668274 | 2.4:-51340597 | MS.gene07723:CDS |
| GAAAGTGAAGGAACATGCTG+TGG | 0.672616 | 2.4:+51341423 | None:intergenic |
| GCAAGAGACACTAACAGCCG+AGG | 0.683106 | 2.4:-51341679 | MS.gene07723:CDS |
| CTTATACCTCGATTCCGTCG+CGG | 0.713335 | 2.4:-51338612 | MS.gene07723:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTTTTATTTTAAATA+TGG | - | chr2.4:51338936-51338955 | MS.gene07723:intron | 0.0% |
| !! | TAAAAAAAATACAAAAAAGA+GGG | - | chr2.4:51338866-51338885 | MS.gene07723:intron | 10.0% |
| !! | TAAATGATTTAAAAATGATT+TGG | + | chr2.4:51339858-51339877 | None:intergenic | 10.0% |
| !! | AATATCATAAAGTAAAAACA+TGG | - | chr2.4:51339219-51339238 | MS.gene07723:intron | 15.0% |
| !! | ATGTAATTATAATTAAGTGT+TGG | + | chr2.4:51339798-51339817 | None:intergenic | 15.0% |
| !! | ATTTATCAAAACATATATGA+AGG | - | chr2.4:51338577-51338596 | MS.gene07723:CDS | 15.0% |
| !! | CAATAATACACAAAATATAT+CGG | + | chr2.4:51339408-51339427 | None:intergenic | 15.0% |
| !! | CTAAAAAAAATACAAAAAAG+AGG | - | chr2.4:51338865-51338884 | MS.gene07723:intron | 15.0% |
| !!! | AGTGTTTATTTGTTTAATTT+TGG | - | chr2.4:51339441-51339460 | MS.gene07723:CDS | 15.0% |
| !!! | CAATTTAATGTTTTTTTTTC+AGG | - | chr2.4:51340113-51340132 | MS.gene07723:intron | 15.0% |
| !!! | TTAACAATTTGGATATTTTT+AGG | + | chr2.4:51341689-51341708 | None:intergenic | 15.0% |
| !! | AAAAGTTTAACATATATGTG+TGG | + | chr2.4:51339834-51339853 | None:intergenic | 20.0% |
| !! | AAAATATTCATATTGTCCAA+TGG | - | chr2.4:51340960-51340979 | MS.gene07723:CDS | 20.0% |
| !! | AAAATTTAGTGTACAAGATA+AGG | - | chr2.4:51341475-51341494 | MS.gene07723:CDS | 20.0% |
| !! | ATAATGAAAAGATTTGAAAG+AGG | - | chr2.4:51338047-51338066 | MS.gene07723:CDS | 20.0% |
| !! | ATCATTAGATCAAAATTAGA+CGG | - | chr2.4:51339998-51340017 | MS.gene07723:intron | 20.0% |
| !! | ATGATTAAAATGTTTCAACT+AGG | + | chr2.4:51339983-51340002 | None:intergenic | 20.0% |
| !! | GTCTTTCATTAGTAAATTTA+TGG | + | chr2.4:51338685-51338704 | None:intergenic | 20.0% |
| !! | TATAGTTTATACACTTTGTT+GGG | - | chr2.4:51341613-51341632 | MS.gene07723:CDS | 20.0% |
| !!! | CGATATATTTTGTGTATTAT+TGG | - | chr2.4:51339406-51339425 | MS.gene07723:CDS | 20.0% |
| !!! | TAAGAATAAATAGTCCTTTT+TGG | - | chr2.4:51338539-51338558 | MS.gene07723:CDS | 20.0% |
| !!! | TGGACAATATGAATATTTTT+TGG | + | chr2.4:51340959-51340978 | None:intergenic | 20.0% |
| !!! | TTAATTTGTTTTGCAATTTG+TGG | - | chr2.4:51339007-51339026 | MS.gene07723:intron | 20.0% |
| !!! | TTACTTTATGATATTGCTTT+TGG | + | chr2.4:51339214-51339233 | None:intergenic | 20.0% |
| !!! | TTCTTTGAAGTATATGAAAA+AGG | - | chr2.4:51338130-51338149 | MS.gene07723:CDS | 20.0% |
| !!! | TTGTTTTTTAGTTTCAACTT+AGG | - | chr2.4:51338633-51338652 | MS.gene07723:CDS | 20.0% |
| !!! | TTTTGTAATTTTGATACAGT+CGG | - | chr2.4:51338816-51338835 | MS.gene07723:CDS | 20.0% |
| ! | AACCATAAGAACTCAAAAAA+TGG | + | chr2.4:51337845-51337864 | None:intergenic | 25.0% |
| ! | ATAATTCATCATACCCTTAT+TGG | - | chr2.4:51340253-51340272 | MS.gene07723:intron | 25.0% |
| ! | ATAGTTTATACACTTTGTTG+GGG | - | chr2.4:51341614-51341633 | MS.gene07723:CDS | 25.0% |
| ! | ATGATAAGTGTTTATGTGAA+AGG | - | chr2.4:51338984-51339003 | MS.gene07723:intron | 25.0% |
| ! | CCAAATTGTTAACTACTTAA+TGG | - | chr2.4:51341697-51341716 | MS.gene07723:CDS | 25.0% |
| ! | CCATTAAGTAGTTAACAATT+TGG | + | chr2.4:51341700-51341719 | None:intergenic | 25.0% |
| ! | GTATAGTTTATACACTTTGT+TGG | - | chr2.4:51341612-51341631 | MS.gene07723:CDS | 25.0% |
| ! | TATTTAAGAGAATGAAACGT+TGG | + | chr2.4:51339274-51339293 | None:intergenic | 25.0% |
| ! | TCAACAAAAGATATTGAACT+TGG | + | chr2.4:51340312-51340331 | None:intergenic | 25.0% |
| ! | TCCTTCTGTTAAAAACAATT+TGG | - | chr2.4:51337758-51337777 | MS.gene07723:CDS | 25.0% |
| ! | TTACTAACAAAACACGTTTA+AGG | - | chr2.4:51338789-51338808 | MS.gene07723:CDS | 25.0% |
| ! | TTTGTATTCTTGTACATGTT+GGG | + | chr2.4:51339730-51339749 | None:intergenic | 25.0% |
| !! | AAGGGTATGATGAATTATAA+GGG | + | chr2.4:51340251-51340270 | None:intergenic | 25.0% |
| !! | CTTCTTTTATTACCTAAACA+AGG | + | chr2.4:51341107-51341126 | None:intergenic | 25.0% |
| !! | TAAGGGTATGATGAATTATA+AGG | + | chr2.4:51340252-51340271 | None:intergenic | 25.0% |
| !! | TATAGACTAAAGTACCAAAA+AGG | + | chr2.4:51338556-51338575 | None:intergenic | 25.0% |
| !! | TTTTCAAACAAGTTTAGAGA+GGG | - | chr2.4:51341568-51341587 | MS.gene07723:CDS | 25.0% |
| !! | TTTTGTATTCTTGTACATGT+TGG | + | chr2.4:51339731-51339750 | None:intergenic | 25.0% |
| !!! | AACCATTTTTTGAGTTCTTA+TGG | - | chr2.4:51337840-51337859 | MS.gene07723:CDS | 25.0% |
| !!! | ATCAAAGTTTTTCAGTAACA+AGG | - | chr2.4:51339547-51339566 | MS.gene07723:intron | 25.0% |
| !!! | ATCTTATGTGATTTTTGACT+TGG | - | chr2.4:51340063-51340082 | MS.gene07723:intron | 25.0% |
| !!! | ATGTTATTAGAGTGTTGAAA+AGG | - | chr2.4:51338168-51338187 | MS.gene07723:CDS | 25.0% |
| !!! | CAATGAAAAGTTTGTTGTTT+TGG | - | chr2.4:51340851-51340870 | MS.gene07723:CDS | 25.0% |
| !!! | GTGTATTTTGTTACTTAGTT+TGG | - | chr2.4:51338599-51338618 | MS.gene07723:CDS | 25.0% |
| !!! | GTTTAATTTTGGATGCTAAT+TGG | - | chr2.4:51339452-51339471 | MS.gene07723:CDS | 25.0% |
| !!! | TCATATATATAAAGTGTTGC+AGG | - | chr2.4:51340581-51340600 | MS.gene07723:CDS | 25.0% |
| !!! | TCCAAATTGTTTTTAACAGA+AGG | + | chr2.4:51337762-51337781 | None:intergenic | 25.0% |
| !!! | TTGAGCTTCTTTTTCATAAT+TGG | + | chr2.4:51339612-51339631 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGATGTTCTTTTG+AGG | - | chr2.4:51337958-51337977 | MS.gene07723:CDS | 25.0% |
| !!! | TTTTTCAAACAAGTTTAGAG+AGG | - | chr2.4:51341567-51341586 | MS.gene07723:CDS | 25.0% |
| !!! | TTTTTGAGTTCTTATGGTTA+TGG | - | chr2.4:51337846-51337865 | MS.gene07723:CDS | 25.0% |
| AAAAACTTTGATTCCAGCAT+AGG | + | chr2.4:51339539-51339558 | None:intergenic | 30.0% | |
| AAATGGTTATGACTAAGAGA+AGG | + | chr2.4:51337828-51337847 | None:intergenic | 30.0% | |
| AAGAAAAACACTGTGATAGT+TGG | - | chr2.4:51337987-51338006 | MS.gene07723:CDS | 30.0% | |
| AATTGTTGTCAATTGTCGTA+TGG | + | chr2.4:51338748-51338767 | None:intergenic | 30.0% | |
| ACAAATTCTCAATTGAGTCT+AGG | + | chr2.4:51341361-51341380 | None:intergenic | 30.0% | |
| ACTAGGATACGATAAATGTA+TGG | + | chr2.4:51339966-51339985 | None:intergenic | 30.0% | |
| ATATTCATATTGTCCAATGG+TGG | - | chr2.4:51340963-51340982 | MS.gene07723:CDS | 30.0% | |
| ATGATTCTGTTGGGAAAAAA+AGG | - | chr2.4:51340706-51340725 | MS.gene07723:CDS | 30.0% | |
| ATGTTTGAGAAATGGCTAAA+AGG | - | chr2.4:51341542-51341561 | MS.gene07723:CDS | 30.0% | |
| CAAAACCTCTTTAGACATTA+CGG | - | chr2.4:51339152-51339171 | MS.gene07723:intron | 30.0% | |
| CAAATTCTCAATTGAGTCTA+GGG | + | chr2.4:51341360-51341379 | None:intergenic | 30.0% | |
| CAAGGATTGAAGAAAATGAA+GGG | - | chr2.4:51341162-51341181 | MS.gene07723:CDS | 30.0% | |
| CTAACAACATGTTTGAGAAA+TGG | - | chr2.4:51341534-51341553 | MS.gene07723:CDS | 30.0% | |
| CTAGTTATCAAAGTTACATG+AGG | - | chr2.4:51338378-51338397 | MS.gene07723:CDS | 30.0% | |
| CTTGTCAAATCACTTGAAAT+TGG | + | chr2.4:51341302-51341321 | None:intergenic | 30.0% | |
| GAAATCTTCTGAGTCTAATA+AGG | - | chr2.4:51337923-51337942 | MS.gene07723:CDS | 30.0% | |
| GAAGAAATAGGAAAGTTGTT+TGG | - | chr2.4:51338311-51338330 | MS.gene07723:CDS | 30.0% | |
| GACAAAGATGTTTATGTCAA+GGG | - | chr2.4:51341418-51341437 | MS.gene07723:CDS | 30.0% | |
| GATACAGTTTCTTTAACTGA+AGG | - | chr2.4:51338011-51338030 | MS.gene07723:CDS | 30.0% | |
| GATTATGTTGTGGAAGAAAT+AGG | - | chr2.4:51338299-51338318 | MS.gene07723:CDS | 30.0% | |
| GATTTGACAAGAGAAACATT+AGG | - | chr2.4:51341311-51341330 | MS.gene07723:CDS | 30.0% | |
| GCATTTCTTAAAGAAGAAGA+TGG | + | chr2.4:51337417-51337436 | None:intergenic | 30.0% | |
| GTTAGTGATTATGTTGCATT+AGG | - | chr2.4:51338194-51338213 | MS.gene07723:CDS | 30.0% | |
| TCAACTTTAACACTCAAAAG+TGG | + | chr2.4:51337663-51337682 | None:intergenic | 30.0% | |
| TCATAACTCTACTAACAGAA+GGG | + | chr2.4:51337719-51337738 | None:intergenic | 30.0% | |
| TGACAAAGATGTTTATGTCA+AGG | - | chr2.4:51341417-51341436 | MS.gene07723:CDS | 30.0% | |
| TGGTAAAGAGGATAGAAAAT+GGG | - | chr2.4:51341637-51341656 | MS.gene07723:CDS | 30.0% | |
| TTAGCAAGGTAAAAATTCCA+AGG | - | chr2.4:51341144-51341163 | MS.gene07723:CDS | 30.0% | |
| ! | ACTCATTTTGTGAAGTTTCA+TGG | - | chr2.4:51338095-51338114 | MS.gene07723:CDS | 30.0% |
| ! | AGAGATTGTTGATTATGTTG+TGG | - | chr2.4:51338289-51338308 | MS.gene07723:CDS | 30.0% |
| ! | AGCAAGCATTTTCCTTAAAA+GGG | + | chr2.4:51340901-51340920 | None:intergenic | 30.0% |
| ! | AGTTGAAATGTTTTCTCAGA+TGG | - | chr2.4:51340764-51340783 | MS.gene07723:CDS | 30.0% |
| ! | ATTGCAAAGTTTGGAACTTT+AGG | - | chr2.4:51340933-51340952 | MS.gene07723:CDS | 30.0% |
| ! | CCAACAATCTTTTCAGAAAA+GGG | + | chr2.4:51340819-51340838 | None:intergenic | 30.0% |
| ! | GAATTTGAGATTGCAAAGTT+TGG | - | chr2.4:51340924-51340943 | MS.gene07723:CDS | 30.0% |
| ! | TCATCAAAATCACCTTGTTT+AGG | - | chr2.4:51341092-51341111 | MS.gene07723:CDS | 30.0% |
| ! | TTCACATGATGTTTTGTACA+AGG | - | chr2.4:51339176-51339195 | MS.gene07723:intron | 30.0% |
| !! | AAAGTTTTTCAGTAACAAGG+AGG | - | chr2.4:51339550-51339569 | MS.gene07723:intron | 30.0% |
| !! | CCTTTTCTGAAAAGATTGTT+GGG | - | chr2.4:51340817-51340836 | MS.gene07723:CDS | 30.0% |
| !! | TACCAACTTTTGAGAATCAA+TGG | - | chr2.4:51338414-51338433 | MS.gene07723:CDS | 30.0% |
| !! | TATTAGAGTGTTGAAAAGGA+AGG | - | chr2.4:51338172-51338191 | MS.gene07723:CDS | 30.0% |
| !! | TGAGTTGTTTTCAATTCATC+CGG | + | chr2.4:51338080-51338099 | None:intergenic | 30.0% |
| !!! | GATTTTGATGATGATGAAGA+TGG | + | chr2.4:51341083-51341102 | None:intergenic | 30.0% |
| !!! | TTGGTTGAAAATGCTGATTT+TGG | - | chr2.4:51340870-51340889 | MS.gene07723:CDS | 30.0% |
| AAACCAAGTAACAACAACCT+TGG | - | chr2.4:51340437-51340456 | MS.gene07723:intron | 35.0% | |
| AAAGGTGAAGTAGTAGTAGT+TGG | + | chr2.4:51337525-51337544 | None:intergenic | 35.0% | |
| AACTATGATTGTTGCTCCAA+TGG | + | chr2.4:51340212-51340231 | None:intergenic | 35.0% | |
| AAGATACTACTACCTTGGTT+TGG | + | chr2.4:51340279-51340298 | None:intergenic | 35.0% | |
| AAGGGTAAAAGAGTCATTTG+AGG | - | chr2.4:51341436-51341455 | MS.gene07723:CDS | 35.0% | |
| AATTTGTGGCCAAGTATGTA+CGG | - | chr2.4:51339021-51339040 | MS.gene07723:intron | 35.0% | |
| ACAAACAACCTCAAAACCAT+TGG | - | chr2.4:51340193-51340212 | MS.gene07723:intron | 35.0% | |
| ACAAGTTTAGAGAGGGTTAA+TGG | - | chr2.4:51341575-51341594 | MS.gene07723:CDS | 35.0% | |
| ACGCATTAATTAACCTAGAC+CGG | + | chr2.4:51339901-51339920 | None:intergenic | 35.0% | |
| AGGATAGAAAATGGGATAGT+GGG | - | chr2.4:51341645-51341664 | MS.gene07723:CDS | 35.0% | |
| ATAAGGGTAGATCTTTGCAT+TGG | + | chr2.4:51340235-51340254 | None:intergenic | 35.0% | |
| ATAAGGTTTGAGCTATAAGC+TGG | + | chr2.4:51340348-51340367 | None:intergenic | 35.0% | |
| ATCATTGAAGCTGAACTCAA+TGG | + | chr2.4:51340403-51340422 | None:intergenic | 35.0% | |
| ATGAGTGCATTAGAAAGTGA+AGG | + | chr2.4:51337567-51337586 | None:intergenic | 35.0% | |
| ATGTCTTCCGTGAATCATTT+CGG | - | chr2.4:51338658-51338677 | MS.gene07723:CDS | 35.0% | |
| ATTTGAAAGAGGTGAAGTAC+CGG | - | chr2.4:51338058-51338077 | MS.gene07723:CDS | 35.0% | |
| CAAAACAAAGTGAAGCAGAA+AGG | + | chr2.4:51339122-51339141 | None:intergenic | 35.0% | |
| CCAAGGATTGAAGAAAATGA+AGG | - | chr2.4:51341161-51341180 | MS.gene07723:CDS | 35.0% | |
| CTCATAACTCTACTAACAGA+AGG | + | chr2.4:51337720-51337739 | None:intergenic | 35.0% | |
| CTTGGAAATTCAACATTCAG+TGG | - | chr2.4:51340516-51340535 | MS.gene07723:CDS | 35.0% | |
| GACTCAGAAGATTTCAAGAA+AGG | + | chr2.4:51337918-51337937 | None:intergenic | 35.0% | |
| GATAAGGTGATAGAGGAAAT+TGG | - | chr2.4:51341491-51341510 | MS.gene07723:CDS | 35.0% | |
| GATGGTGATAACTCAAAAGT+TGG | + | chr2.4:51341065-51341084 | None:intergenic | 35.0% | |
| GATTATGTTGCATTAGGTGT+TGG | - | chr2.4:51338200-51338219 | MS.gene07723:CDS | 35.0% | |
| GGAACAAGAATGGTAAGATT+TGG | - | chr2.4:51338342-51338361 | MS.gene07723:CDS | 35.0% | |
| GTGGTAAAGAGGATAGAAAA+TGG | - | chr2.4:51341636-51341655 | MS.gene07723:CDS | 35.0% | |
| GTTTGAGTCTTCATTCATCA+AGG | - | chr2.4:51338474-51338493 | MS.gene07723:CDS | 35.0% | |
| TAGTTCAATAGCAGAAGCTT+TGG | - | chr2.4:51340632-51340651 | MS.gene07723:CDS | 35.0% | |
| TCTATGTTGGAGATTTGAAG+TGG | - | chr2.4:51338231-51338250 | MS.gene07723:CDS | 35.0% | |
| TGAATCCGTAATGTCTAAAG+AGG | + | chr2.4:51339160-51339179 | None:intergenic | 35.0% | |
| TGATAGAGGAAATTGGTGTA+GGG | - | chr2.4:51341498-51341517 | MS.gene07723:CDS | 35.0% | |
| TGCAAGGAAATGATTCTGTT+GGG | - | chr2.4:51340697-51340716 | MS.gene07723:CDS | 35.0% | |
| TGGTTCAGATCAGAAAAAGA+TGG | - | chr2.4:51340536-51340555 | MS.gene07723:CDS | 35.0% | |
| TGTACAAGATAAGGTGATAG+AGG | - | chr2.4:51341484-51341503 | MS.gene07723:CDS | 35.0% | |
| TGTCAATGAAGATCAGAAGA+AGG | - | chr2.4:51340992-51341011 | MS.gene07723:CDS | 35.0% | |
| TTATGGTCCGAAATGATTCA+CGG | + | chr2.4:51338668-51338687 | None:intergenic | 35.0% | |
| TTCTGTTGGGAAAAAAAGGT+TGG | - | chr2.4:51340710-51340729 | MS.gene07723:CDS | 35.0% | |
| TTGCAAGGAAATGATTCTGT+TGG | - | chr2.4:51340696-51340715 | MS.gene07723:CDS | 35.0% | |
| TTGGAGTTGGATTCTCTTAA+GGG | - | chr2.4:51340456-51340475 | MS.gene07723:intron | 35.0% | |
| ! | AGCACATTCCTTTGATGATT+TGG | + | chr2.4:51340664-51340683 | None:intergenic | 35.0% |
| ! | AGTCATTTGAGGAGGTTTTT+GGG | - | chr2.4:51341447-51341466 | MS.gene07723:CDS | 35.0% |
| ! | CAGCAAGCATTTTCCTTAAA+AGG | + | chr2.4:51340902-51340921 | None:intergenic | 35.0% |
| ! | CCCAACAATCTTTTCAGAAA+AGG | + | chr2.4:51340820-51340839 | None:intergenic | 35.0% |
| ! | CCTTCATTTTCTTCAATCCT+TGG | + | chr2.4:51341164-51341183 | None:intergenic | 35.0% |
| ! | GAAAGTTGTTTGGTGAAGAA+GGG | - | chr2.4:51338321-51338340 | MS.gene07723:CDS | 35.0% |
| ! | GGTTGATTCCAAATCATCAA+AGG | - | chr2.4:51340653-51340672 | MS.gene07723:CDS | 35.0% |
| ! | TTACATGAGGTGTCAAATGA+GGG | - | chr2.4:51338391-51338410 | MS.gene07723:CDS | 35.0% |
| ! | TTGGCGTATGTTTGAAATAG+TGG | - | chr2.4:51340082-51340101 | MS.gene07723:intron | 35.0% |
| !! | AAAAGCATTGTTGGTTGGTA+AGG | - | chr2.4:51339075-51339094 | MS.gene07723:intron | 35.0% |
| !! | AAAATGGGATAGTGGGTTTA+TGG | - | chr2.4:51341652-51341671 | MS.gene07723:CDS | 35.0% |
| !! | AAATGGGATAGTGGGTTTAT+GGG | - | chr2.4:51341653-51341672 | MS.gene07723:CDS | 35.0% |
| !! | ATTTTGGTGACACCCTTTTA+AGG | - | chr2.4:51340886-51340905 | MS.gene07723:CDS | 35.0% |
| !! | CACCATTGATTCTCAAAAGT+TGG | + | chr2.4:51338419-51338438 | None:intergenic | 35.0% |
| !! | CCCTTTTCTGAAAAGATTGT+TGG | - | chr2.4:51340816-51340835 | MS.gene07723:CDS | 35.0% |
| !! | GATATTGAACTTGGTGTATC+TGG | + | chr2.4:51340303-51340322 | None:intergenic | 35.0% |
| !! | GTTGGAGCTATTTTCTATGT+TGG | - | chr2.4:51338218-51338237 | MS.gene07723:CDS | 35.0% |
| !! | TGAACTTGACTTGTTTAGCA+AGG | - | chr2.4:51341130-51341149 | MS.gene07723:CDS | 35.0% |
| !! | TGGATAGTGGATGATAATGA+TGG | - | chr2.4:51338251-51338270 | MS.gene07723:CDS | 35.0% |
| !!! | GTTCCACTTTTTGTTCAACT+GGG | + | chr2.4:51340148-51340167 | None:intergenic | 35.0% |
| !!! | TGTTCCACTTTTTGTTCAAC+TGG | + | chr2.4:51340149-51340168 | None:intergenic | 35.0% |
| AACAGAAGGGTCATCAAGAA+TGG | + | chr2.4:51337706-51337725 | None:intergenic | 40.0% | |
| ACCGGTTGATCTCAAATCAA+CGG | + | chr2.4:51339883-51339902 | None:intergenic | 40.0% | |
| AGAAGAATCTGTTGCCTTCA+TGG | - | chr2.4:51339648-51339667 | MS.gene07723:intron | 40.0% | |
| AGCTCAAGCTCATCAAAGAA+GGG | - | chr2.4:51337602-51337621 | MS.gene07723:CDS | 40.0% | |
| AGTAACAACAACCTTGGAGT+TGG | - | chr2.4:51340443-51340462 | MS.gene07723:intron | 40.0% | |
| AGTAGAGTTATGAGAGAAGC+TGG | - | chr2.4:51337726-51337745 | MS.gene07723:CDS | 40.0% | |
| AGTTTAGAGAGGGTTAATGG+TGG | - | chr2.4:51341578-51341597 | MS.gene07723:CDS | 40.0% | |
| ATGAAGGCAACAGATTCTTC+TGG | + | chr2.4:51339649-51339668 | None:intergenic | 40.0% | |
| ATTCTGGACTATATGGCAGA+AGG | - | chr2.4:51339045-51339064 | MS.gene07723:intron | 40.0% | |
| ATTGACAATACTGCCACCAT+TGG | + | chr2.4:51340979-51340998 | None:intergenic | 40.0% | |
| CTAACTGTTTCACATTGCCA+TGG | + | chr2.4:51340615-51340634 | None:intergenic | 40.0% | |
| CTTAAGAGAATCCAACTCCA+AGG | + | chr2.4:51340457-51340476 | None:intergenic | 40.0% | |
| CTTGGAGTTGGATTCTCTTA+AGG | - | chr2.4:51340455-51340474 | MS.gene07723:intron | 40.0% | |
| GAAGGATTCAGTGATGAAGT+TGG | - | chr2.4:51341010-51341029 | MS.gene07723:CDS | 40.0% | |
| GAGGATAGAAAATGGGATAG+TGG | - | chr2.4:51341644-51341663 | MS.gene07723:CDS | 40.0% | |
| GCAATTGCAGAATCAGTGTT+TGG | - | chr2.4:51340738-51340757 | MS.gene07723:CDS | 40.0% | |
| GGTAAAAGAGTCATTTGAGG+AGG | - | chr2.4:51341439-51341458 | MS.gene07723:CDS | 40.0% | |
| GTAAAGACAACTCTTGCACT+TGG | - | chr2.4:51340498-51340517 | MS.gene07723:intron | 40.0% | |
| GTACGGTATTCTGGACTATA+TGG | - | chr2.4:51339038-51339057 | MS.gene07723:intron | 40.0% | |
| GTCATTTCCTTGTTCTTAGC+TGG | + | chr2.4:51341401-51341420 | None:intergenic | 40.0% | |
| GTGATAGAGGAAATTGGTGT+AGG | - | chr2.4:51341497-51341516 | MS.gene07723:CDS | 40.0% | |
| GTTGGATTCTCTTAAGGGTA+TGG | - | chr2.4:51340461-51340480 | MS.gene07723:intron | 40.0% | |
| GTTTAGAGAGGGTTAATGGT+GGG | - | chr2.4:51341579-51341598 | MS.gene07723:CDS | 40.0% | |
| GTTTATACACTTTGTTGGGG+TGG | - | chr2.4:51341617-51341636 | MS.gene07723:CDS | 40.0% | |
| GTTTGAGCTATAAGCTGGTT+TGG | + | chr2.4:51340343-51340362 | None:intergenic | 40.0% | |
| TCAAAGTCCAGCTAAGAACA+AGG | - | chr2.4:51341391-51341410 | MS.gene07723:CDS | 40.0% | |
| TCAAGAGCTCTACATTGAAG+AGG | + | chr2.4:51337471-51337490 | None:intergenic | 40.0% | |
| TCCAGAATACCGTACATACT+TGG | + | chr2.4:51339033-51339052 | None:intergenic | 40.0% | |
| TGACCCAGTTGAACAAAAAG+TGG | - | chr2.4:51340142-51340161 | MS.gene07723:intron | 40.0% | |
| TTGATTCCAGCATAGGAGAT+GGG | + | chr2.4:51339532-51339551 | None:intergenic | 40.0% | |
| TTTAGAGAGGGTTAATGGTG+GGG | - | chr2.4:51341580-51341599 | MS.gene07723:CDS | 40.0% | |
| TTTGATTCCAGCATAGGAGA+TGG | + | chr2.4:51339533-51339552 | None:intergenic | 40.0% | |
| ! | ACTCCAAGGTTGTTGTTACT+TGG | + | chr2.4:51340443-51340462 | None:intergenic | 40.0% |
| ! | CATCAAAGGAATGTGCTACT+TGG | - | chr2.4:51340667-51340686 | MS.gene07723:CDS | 40.0% |
| ! | GAGTCATTTGAGGAGGTTTT+TGG | - | chr2.4:51341446-51341465 | MS.gene07723:CDS | 40.0% |
| ! | GATTCTCTTAAGGGTATGGA+AGG | - | chr2.4:51340465-51340484 | MS.gene07723:intron | 40.0% |
| ! | GGAAAGTTGTTTGGTGAAGA+AGG | - | chr2.4:51338320-51338339 | MS.gene07723:CDS | 40.0% |
| ! | GTTAATGGTGGGGGTAAAAA+TGG | - | chr2.4:51341590-51341609 | MS.gene07723:CDS | 40.0% |
| ! | GTTACATGAGGTGTCAAATG+AGG | - | chr2.4:51338390-51338409 | MS.gene07723:CDS | 40.0% |
| ! | TCAATCTTGAAGCACTCTCT+AGG | - | chr2.4:51337324-51337343 | MS.gene07723:CDS | 40.0% |
| ! | TGGAGATTTGAAGTGGATAG+TGG | - | chr2.4:51338238-51338257 | MS.gene07723:CDS | 40.0% |
| ! | TTTGAGGTTGTTTGTTCTGG+TGG | + | chr2.4:51340188-51340207 | None:intergenic | 40.0% |
| !! | ACCGTTGATTTGAGATCAAC+CGG | - | chr2.4:51339879-51339898 | MS.gene07723:intron | 40.0% |
| !! | CATTGTTGGTTGGTAAGGTA+AGG | - | chr2.4:51339080-51339099 | MS.gene07723:intron | 40.0% |
| !! | CTGTGAAAAGCATTGTTGGT+TGG | - | chr2.4:51339070-51339089 | MS.gene07723:intron | 40.0% |
| !! | TACCTTGGTTTGGCCAATAA+GGG | + | chr2.4:51340269-51340288 | None:intergenic | 40.0% |
| !! | TTGTTGCTCCAATGGTTTTG+AGG | + | chr2.4:51340204-51340223 | None:intergenic | 40.0% |
| !!! | GCTACTTGGTTGTTTTTGCA+AGG | - | chr2.4:51340681-51340700 | MS.gene07723:CDS | 40.0% |
| !!! | GGTTTTGAGGTTGTTTGTTC+TGG | + | chr2.4:51340191-51340210 | None:intergenic | 40.0% |
| ACATGCTGTGGTTGAAGCAA+AGG | + | chr2.4:51337543-51337562 | None:intergenic | 45.0% | |
| ACTTTGTTGGGGTGGTAAAG+AGG | - | chr2.4:51341625-51341644 | MS.gene07723:CDS | 45.0% | |
| CTATGAGACTGAAGCCATGA+AGG | + | chr2.4:51339665-51339684 | None:intergenic | 45.0% | |
| CTCAAGCTCATCAAAGAAGG+GGG | - | chr2.4:51337604-51337623 | MS.gene07723:CDS | 45.0% | |
| CTGGCAAGATACTACTACCT+TGG | + | chr2.4:51340284-51340303 | None:intergenic | 45.0% | |
| CTTCAAGATTGAAGCAGCCT+CGG | + | chr2.4:51337316-51337335 | None:intergenic | 45.0% | |
| GAAAGTGAAGGAACATGCTG+TGG | + | chr2.4:51337555-51337574 | None:intergenic | 45.0% | |
| GAGCTCAAGCTCATCAAAGA+AGG | - | chr2.4:51337601-51337620 | MS.gene07723:CDS | 45.0% | |
| GCCAAGTATGTACGGTATTC+TGG | - | chr2.4:51339029-51339048 | MS.gene07723:intron | 45.0% | |
| GCTCAAGCTCATCAAAGAAG+GGG | - | chr2.4:51337603-51337622 | MS.gene07723:CDS | 45.0% | |
| GGTGAAGAAGGGAACAAGAA+TGG | - | chr2.4:51338332-51338351 | MS.gene07723:CDS | 45.0% | |
| TACCCTTATTGGCCAAACCA+AGG | - | chr2.4:51340264-51340283 | MS.gene07723:intron | 45.0% | |
| TCAAAACCCATCTCCTATGC+TGG | - | chr2.4:51339523-51339542 | MS.gene07723:intron | 45.0% | |
| TGTTGCAGGAGAATGTTCCA+TGG | - | chr2.4:51340595-51340614 | MS.gene07723:CDS | 45.0% | |
| TTAGAGAGGGTTAATGGTGG+GGG | - | chr2.4:51341581-51341600 | MS.gene07723:CDS | 45.0% | |
| ! | GAAGAGGTGTGATTTGTGCA+TGG | + | chr2.4:51337368-51337387 | None:intergenic | 45.0% |
| ! | GATTTGAGATCAACCGGTCT+AGG | - | chr2.4:51339885-51339904 | MS.gene07723:intron | 45.0% |
| !! | CTACCTTGGTTTGGCCAATA+AGG | + | chr2.4:51340270-51340289 | None:intergenic | 45.0% |
| !! | GGCACTGTGAAAAGCATTGT+TGG | - | chr2.4:51339066-51339085 | MS.gene07723:intron | 45.0% |
| AGTGTAGCAGCAACGTGAAG+AGG | + | chr2.4:51337384-51337403 | None:intergenic | 50.0% | |
| CAAGCTGTTCCTGTTCCATC+TGG | - | chr2.4:51338443-51338462 | MS.gene07723:CDS | 50.0% | |
| CTAGGCTTAGCACGTAGAAG+AGG | - | chr2.4:51337342-51337361 | MS.gene07723:CDS | 50.0% | |
| CTCAAACCAAGTCCACCAGA+TGG | + | chr2.4:51338461-51338480 | None:intergenic | 50.0% | |
| CTTATACCTCGATTCCGTCG+CGG | - | chr2.4:51340363-51340382 | MS.gene07723:intron | 50.0% | |
| GAGGAAATTGGTGTAGGGTG+TGG | - | chr2.4:51341503-51341522 | MS.gene07723:CDS | 50.0% | |
| GGCAACAGATTCTTCTGGTC+TGG | + | chr2.4:51339644-51339663 | None:intergenic | 50.0% | |
| TAGCACACAAGCACGTCAGA+AGG | - | chr2.4:51339682-51339701 | MS.gene07723:intron | 50.0% | |
| TGCATGATTGTTGTCCGCGA+CGG | + | chr2.4:51340380-51340399 | None:intergenic | 50.0% | |
| CCAAGTCCACCAGATGGAAC+AGG | + | chr2.4:51338455-51338474 | None:intergenic | 55.0% | |
| CGCGACGGAATCGAGGTATA+AGG | + | chr2.4:51340365-51340384 | None:intergenic | 55.0% | |
| GCAAGAGACACTAACAGCCG+AGG | - | chr2.4:51337296-51337315 | MS.gene07723:CDS | 55.0% | |
| GCTGTTCCTGTTCCATCTGG+TGG | - | chr2.4:51338446-51338465 | MS.gene07723:CDS | 55.0% | |
| GTGGTTGCTGCTGCTGTTGT+TGG | + | chr2.4:51337644-51337663 | None:intergenic | 55.0% | |
| !! | CCTGTTCCATCTGGTGGACT+TGG | - | chr2.4:51338452-51338471 | MS.gene07723:CDS | 55.0% |
| TGTTGTCCGCGACGGAATCG+AGG | + | chr2.4:51340372-51340391 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 51337273 | 51341724 | 51337273 | ID=MS.gene07723 |
| chr2.4 | mRNA | 51337273 | 51341724 | 51337273 | ID=MS.gene07723.t1;Parent=MS.gene07723 |
| chr2.4 | exon | 51340502 | 51341724 | 51340502 | ID=MS.gene07723.t1.exon1;Parent=MS.gene07723.t1 |
| chr2.4 | CDS | 51340502 | 51341724 | 51340502 | ID=cds.MS.gene07723.t1;Parent=MS.gene07723.t1 |
| chr2.4 | exon | 51339294 | 51339501 | 51339294 | ID=MS.gene07723.t1.exon2;Parent=MS.gene07723.t1 |
| chr2.4 | CDS | 51339294 | 51339501 | 51339294 | ID=cds.MS.gene07723.t1;Parent=MS.gene07723.t1 |
| chr2.4 | exon | 51337273 | 51338862 | 51337273 | ID=MS.gene07723.t1.exon3;Parent=MS.gene07723.t1 |
| chr2.4 | CDS | 51337273 | 51338862 | 51337273 | ID=cds.MS.gene07723.t1;Parent=MS.gene07723.t1 |
| Gene Sequence |
| Protein sequence |
