Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055184.t1 | GAU12858.1 | 81.9 | 806 | 81 | 9 | 1 | 743 | 5 | 808 | 0.00E+00 | 1108.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055184.t1 | Q8RXF1 | 62.1 | 805 | 219 | 13 | 1 | 743 | 5 | 785 | 1.8e-224 | 780.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055184.t1 | A0A2Z6LKS9 | 81.9 | 806 | 81 | 9 | 1 | 743 | 5 | 808 | 0.0e+00 | 1108.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055184 | MS.gene52116 | PPI |
| MS.gene06729 | MS.gene055184 | PPI |
| MS.gene013796 | MS.gene055184 | PPI |
| MS.gene055184 | MS.gene003478 | PPI |
| MS.gene055184 | MS.gene013791 | PPI |
| MS.gene06946 | MS.gene055184 | PPI |
| MS.gene02577 | MS.gene055184 | PPI |
| MS.gene73791 | MS.gene055184 | PPI |
| MS.gene022734 | MS.gene055184 | PPI |
| MS.gene057666 | MS.gene055184 | PPI |
| MS.gene73790 | MS.gene055184 | PPI |
| MS.gene46271 | MS.gene055184 | PPI |
| MS.gene013607 | MS.gene055184 | PPI |
| MS.gene055184 | MS.gene46269 | PPI |
| MS.gene055184 | MS.gene020229 | PPI |
| MS.gene39316 | MS.gene055184 | PPI |
| MS.gene055184 | MS.gene03206 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055184.t1 | MTR_8g106170 | 84.722 | 792 | 59 | 7 | 11 | 743 | 16 | 804 | 0.0 | 1142 |
| MS.gene055184.t1 | MTR_7g063860 | 82.080 | 452 | 50 | 3 | 298 | 743 | 1 | 427 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055184.t1 | AT1G14650 | 63.321 | 807 | 206 | 17 | 1 | 743 | 5 | 785 | 0.0 | 837 |
| MS.gene055184.t1 | AT1G14650 | 63.321 | 807 | 206 | 17 | 1 | 743 | 5 | 785 | 0.0 | 837 |
| MS.gene055184.t1 | AT1G14650 | 63.321 | 807 | 206 | 17 | 1 | 743 | 5 | 785 | 0.0 | 837 |
| MS.gene055184.t1 | AT1G14640 | 58.177 | 746 | 257 | 17 | 1 | 706 | 5 | 735 | 0.0 | 692 |
| MS.gene055184.t1 | AT1G14640 | 58.177 | 746 | 257 | 17 | 1 | 706 | 5 | 735 | 0.0 | 692 |
| MS.gene055184.t1 | AT4G16200 | 32.258 | 279 | 115 | 6 | 33 | 237 | 10 | 288 | 2.98e-32 | 127 |
| MS.gene055184.t1 | AT5G12280 | 48.966 | 145 | 53 | 3 | 590 | 734 | 294 | 417 | 2.46e-30 | 124 |
| MS.gene055184.t1 | AT5G12280 | 27.984 | 243 | 137 | 6 | 40 | 281 | 89 | 294 | 1.48e-11 | 67.8 |
| MS.gene055184.t1 | AT5G06520 | 35.246 | 244 | 117 | 9 | 34 | 273 | 391 | 597 | 3.65e-30 | 127 |
| MS.gene055184.t1 | AT5G06520 | 31.892 | 185 | 98 | 7 | 47 | 205 | 92 | 274 | 1.65e-13 | 74.7 |
| MS.gene055184.t1 | AT5G06520 | 31.765 | 170 | 93 | 5 | 141 | 308 | 79 | 227 | 1.11e-12 | 72.0 |
| MS.gene055184.t1 | AT5G06890 | 54.667 | 75 | 22 | 3 | 661 | 734 | 2 | 65 | 6.41e-15 | 70.5 |
| MS.gene055184.t1 | AT2G43960 | 27.200 | 250 | 156 | 8 | 40 | 280 | 9 | 241 | 2.58e-14 | 76.3 |
| MS.gene055184.t1 | AT3G49130 | 36.066 | 183 | 89 | 9 | 128 | 300 | 39 | 203 | 4.85e-14 | 74.3 |
Find 230 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCTGACATTTCACTATT+AGG | 0.211420 | 7.4:+40255182 | None:intergenic |
| CAGAGTGGTTTCTCGTATTT+TGG | 0.223336 | 7.4:+40255103 | None:intergenic |
| TACTTCATCCTCTTTGGTTC+TGG | 0.241819 | 7.4:+40254441 | None:intergenic |
| GATCCCTGAGGATAAATTTC+TGG | 0.243440 | 7.4:-40254403 | MS.gene055184:CDS |
| CCGAGAGGCTTTATCAATAA+TGG | 0.256433 | 7.4:+40256195 | None:intergenic |
| AGATTTCCTTCATCAAAATT+AGG | 0.258736 | 7.4:+40254342 | None:intergenic |
| CTCTTTGGTTCTGGTTCCTC+TGG | 0.261880 | 7.4:+40254450 | None:intergenic |
| AGCAACCTAAGCAGGTTATA+TGG | 0.279454 | 7.4:-40254956 | MS.gene055184:CDS |
| GATAGGAGAAACCACAAATT+TGG | 0.286635 | 7.4:+40255220 | None:intergenic |
| TTGGTTTCATGAAATGAAAT+TGG | 0.291074 | 7.4:+40255795 | None:intergenic |
| GGGAACGAGAGCTGCTAGTT+TGG | 0.298170 | 7.4:-40255363 | MS.gene055184:CDS |
| GGATCAAGTACTTTCTTTAC+TGG | 0.315349 | 7.4:+40255962 | None:intergenic |
| CTCAATTTCTGCTTGTTAGC+AGG | 0.319229 | 7.4:+40254231 | None:intergenic |
| GAAATTAAACTTGGGATTGC+TGG | 0.322274 | 7.4:+40256120 | None:intergenic |
| ACATCGTTACCATCAGTTTC+CGG | 0.326509 | 7.4:+40256025 | None:intergenic |
| TGGTTTCATGAAATGAAATT+GGG | 0.327351 | 7.4:+40255796 | None:intergenic |
| GGCATTCCTTGGTTATTCAT+AGG | 0.329052 | 7.4:+40254618 | None:intergenic |
| ATTGGAAGGCCAATACTATT+AGG | 0.329277 | 7.4:+40254708 | None:intergenic |
| TCTTTCTGTTCTTTGTACTT+AGG | 0.329702 | 7.4:+40255137 | None:intergenic |
| GCTTCCTCAGGAGGCGGCGG+TGG | 0.330227 | 7.4:+40254486 | None:intergenic |
| TCGTCATACTTCATCCTCTT+TGG | 0.331389 | 7.4:+40254435 | None:intergenic |
| AAGGGAAGAAGAGTGAAGTC+AGG | 0.334414 | 7.4:-40255328 | MS.gene055184:CDS |
| AGCTTCTCTGTCAACCCCTT+TGG | 0.339349 | 7.4:+40255710 | None:intergenic |
| CAAGCAATGTCACAAAATAT+TGG | 0.348373 | 7.4:-40254897 | MS.gene055184:CDS |
| TACAAATTGCTATGATTGAT+TGG | 0.348644 | 7.4:-40255571 | MS.gene055184:CDS |
| TGGTTATTCATAGGAATTGA+TGG | 0.349393 | 7.4:+40254627 | None:intergenic |
| CCTCCCACTGATGGAAATCT+TGG | 0.352504 | 7.4:-40256307 | MS.gene055184:CDS |
| CGATTAGGATTGTGAATAAC+TGG | 0.353048 | 7.4:-40255283 | MS.gene055184:CDS |
| TTAAACCGGGCAGAAATATC+AGG | 0.353449 | 7.4:+40255986 | None:intergenic |
| TCCTCCCTTGTAATGCCTTC+AGG | 0.361482 | 7.4:+40255908 | None:intergenic |
| CACAATTTGTGGCTCGTAAT+GGG | 0.363738 | 7.4:-40255862 | MS.gene055184:CDS |
| CTTTCTTTACTGGTTTAAAC+CGG | 0.371124 | 7.4:+40255972 | None:intergenic |
| ACAAGAGCACTCTAGGAAAA+AGG | 0.374143 | 7.4:-40255621 | MS.gene055184:CDS |
| GTGCTGATAATATGCATGAT+AGG | 0.375932 | 7.4:+40256081 | None:intergenic |
| ACAATCCTAATCGGTGGTTC+AGG | 0.375962 | 7.4:+40255293 | None:intergenic |
| CTTCCTCAGGAGGCGGCGGT+GGG | 0.381326 | 7.4:+40254487 | None:intergenic |
| AAATCTCAAAGGACAAGTTC+TGG | 0.387127 | 7.4:-40254325 | MS.gene055184:CDS |
| GAAGGAAGTAGAAATGGATA+TGG | 0.387273 | 7.4:-40255414 | MS.gene055184:CDS |
| GCCACACACACTAGAACTAT+TGG | 0.387802 | 7.4:-40256247 | MS.gene055184:CDS |
| TATGCAGGAAGCCTGTCTTC+TGG | 0.393917 | 7.4:+40255254 | None:intergenic |
| CAGTTATTCACAATCCTAAT+CGG | 0.396142 | 7.4:+40255284 | None:intergenic |
| CGGATTGAGGAAATTAAACT+TGG | 0.398821 | 7.4:+40256111 | None:intergenic |
| CGTTCCCTCTTCAACAAGTT+GGG | 0.404253 | 7.4:+40255379 | None:intergenic |
| ACTCCTTGAGGTGGAGGTGG+TGG | 0.405349 | 7.4:+40254513 | None:intergenic |
| TAAATTTCTGGATCAGCATC+AGG | 0.405570 | 7.4:-40254391 | MS.gene055184:CDS |
| AGAGGTTTCCAATGCTGTTA+AGG | 0.406420 | 7.4:-40255003 | MS.gene055184:CDS |
| CTCCCACTGATGGAAATCTT+GGG | 0.407306 | 7.4:-40256306 | MS.gene055184:CDS |
| TGTGCATGCCTGGTCTTGGT+GGG | 0.408145 | 7.4:+40254682 | None:intergenic |
| GGTAGGGAAGGAAGTAGAAA+TGG | 0.408708 | 7.4:-40255420 | MS.gene055184:CDS |
| CGTCCTCTTCCGCCACCAAC+TGG | 0.418670 | 7.4:-40254783 | MS.gene055184:CDS |
| GTGGAGGAATGGGCATTCCT+TGG | 0.419123 | 7.4:+40254607 | None:intergenic |
| TAGAGATTCAACCAAATTTG+TGG | 0.421417 | 7.4:-40255231 | MS.gene055184:CDS |
| TGGTAACGATGTAGCAACTA+TGG | 0.425035 | 7.4:-40256014 | MS.gene055184:CDS |
| TTCTCTGTCAACCCCTTTGG+AGG | 0.429998 | 7.4:+40255713 | None:intergenic |
| GGAGGAGGTGCAGCAGGACC+AGG | 0.431521 | 7.4:+40254828 | None:intergenic |
| GATGTGTGAATAGGCTAGAA+TGG | 0.434898 | 7.4:-40255652 | MS.gene055184:CDS |
| TTACCATCAGTTTCCGGTGC+AGG | 0.435503 | 7.4:+40256031 | None:intergenic |
| CCTCACCCTCATCCACCATC+AGG | 0.435685 | 7.4:-40254555 | MS.gene055184:CDS |
| AAAGCTTACAGCACAATTTG+TGG | 0.438501 | 7.4:-40255873 | MS.gene055184:CDS |
| TAGGAATTGATGGATGCATT+GGG | 0.444523 | 7.4:+40254637 | None:intergenic |
| ATCACCTCCTCAAGTGTCAT+TGG | 0.449631 | 7.4:+40255485 | None:intergenic |
| AAGACCCTGAACCACCGATT+AGG | 0.451674 | 7.4:-40255298 | MS.gene055184:CDS |
| GCAACCTAAGCAGGTTATAT+GGG | 0.454626 | 7.4:-40254955 | MS.gene055184:CDS |
| AATTTCAGCCTTAACAGCAT+TGG | 0.456041 | 7.4:+40254995 | None:intergenic |
| GATACTCCTTGAGGTGGAGG+TGG | 0.456648 | 7.4:+40254510 | None:intergenic |
| TGCATGCCTGGTCTTGGTGG+GGG | 0.457278 | 7.4:+40254684 | None:intergenic |
| GAAGAAGATGATGCTGAGGT+AGG | 0.457553 | 7.4:-40255437 | MS.gene055184:CDS |
| GGATGAGGGTGAGGAACATA+AGG | 0.458423 | 7.4:+40254564 | None:intergenic |
| GCACAATTTGTGGCTCGTAA+TGG | 0.460668 | 7.4:-40255863 | MS.gene055184:CDS |
| ATGTGCATGCCTGGTCTTGG+TGG | 0.461170 | 7.4:+40254681 | None:intergenic |
| AGTCCAGTTGGTGGCGGAAG+AGG | 0.462185 | 7.4:+40254780 | None:intergenic |
| GGAATCAGTTCACCGGTGAT+AGG | 0.466222 | 7.4:+40255203 | None:intergenic |
| GATCCAGGTGGTGGAGGAAT+GGG | 0.466476 | 7.4:+40254597 | None:intergenic |
| AGATCCAGGTGGTGGAGGAA+TGG | 0.470134 | 7.4:+40254596 | None:intergenic |
| GGTCTTGGAGGAGGTGCAGC+AGG | 0.470671 | 7.4:+40254822 | None:intergenic |
| TCGTTCCCTCTTCAACAAGT+TGG | 0.470849 | 7.4:+40255378 | None:intergenic |
| TCAATTTCTGCTTGTTAGCA+GGG | 0.474049 | 7.4:+40254232 | None:intergenic |
| GTCATGTGCATGCCTGGTCT+TGG | 0.475861 | 7.4:+40254678 | None:intergenic |
| TTCTGGTTCCTCTGGAAACA+AGG | 0.479917 | 7.4:+40254458 | None:intergenic |
| AACTGTATACTGCTCAGCCT+CGG | 0.479959 | 7.4:+40255937 | None:intergenic |
| CCATCCCATATAACCTGCTT+AGG | 0.482921 | 7.4:+40254951 | None:intergenic |
| AATGTAAACATGTTGTGAGT+TGG | 0.484691 | 7.4:+40255776 | None:intergenic |
| GGCTTCCTGAAGGCATTACA+AGG | 0.485693 | 7.4:-40255913 | MS.gene055184:CDS |
| GGAGCTTCCTCAGGAGGCGG+CGG | 0.486510 | 7.4:+40254483 | None:intergenic |
| TTGGTTGAATCTCTATATGC+AGG | 0.488704 | 7.4:+40255239 | None:intergenic |
| GGGGATACTCCTTGAGGTGG+AGG | 0.491423 | 7.4:+40254507 | None:intergenic |
| AGATGATGCTGAGGTAGGGA+AGG | 0.492151 | 7.4:-40255432 | MS.gene055184:CDS |
| TCAGTGGGAGGAGCGGGTAG+AGG | 0.492761 | 7.4:+40256319 | None:intergenic |
| AACTGAGATCCAGGTGGTGG+AGG | 0.493314 | 7.4:+40254591 | None:intergenic |
| TGCACATGACGCAATCTCTC+CGG | 0.493421 | 7.4:-40254665 | MS.gene055184:CDS |
| TGATCCAGAAATTTATCCTC+AGG | 0.493754 | 7.4:+40254399 | None:intergenic |
| AAATGATGAGCAACCTAAGC+AGG | 0.494557 | 7.4:-40254964 | MS.gene055184:CDS |
| AGTGTTCACAAGAGCACTCT+AGG | 0.496209 | 7.4:-40255628 | MS.gene055184:CDS |
| CCTTGCTGATGCATATTCAA+AGG | 0.496930 | 7.4:-40255744 | MS.gene055184:CDS |
| AATGGATATGGACGAGGAAG+AGG | 0.498367 | 7.4:-40255402 | MS.gene055184:CDS |
| TTTCCATCAGTGGGAGGAGC+GGG | 0.498622 | 7.4:+40256313 | None:intergenic |
| ACTGTATACTGCTCAGCCTC+GGG | 0.500711 | 7.4:+40255938 | None:intergenic |
| ATAGGAATTGATGGATGCAT+TGG | 0.501574 | 7.4:+40254636 | None:intergenic |
| ATGTGTGAATAGGCTAGAAT+GGG | 0.505142 | 7.4:-40255651 | MS.gene055184:CDS |
| CAATCCTAATCGGTGGTTCA+GGG | 0.505409 | 7.4:+40255294 | None:intergenic |
| TGACACTTGAGGAGGTGATA+AGG | 0.505752 | 7.4:-40255481 | MS.gene055184:CDS |
| ATATTGTCCTTGAGAAAGCC+TGG | 0.508540 | 7.4:+40254201 | None:intergenic |
| AAGAAGATGATGCTGAGGTA+GGG | 0.508977 | 7.4:-40255436 | MS.gene055184:CDS |
| CTACCCGCTCCTCCCACTGA+TGG | 0.510889 | 7.4:-40256316 | MS.gene055184:CDS |
| AGTACAAAGAACAGAAAGAA+AGG | 0.511535 | 7.4:-40255133 | MS.gene055184:CDS |
| GATAGGGATCAGACGGATTG+AGG | 0.512224 | 7.4:+40256098 | None:intergenic |
| AACAAGGGAGGAGCTTCCTC+AGG | 0.512702 | 7.4:+40254474 | None:intergenic |
| GATTGCGTCATGTGCATGCC+TGG | 0.513367 | 7.4:+40254672 | None:intergenic |
| TTCCTCAGGAGGCGGCGGTG+GGG | 0.516253 | 7.4:+40254488 | None:intergenic |
| TATTCTAATCCTAATAGTAT+TGG | 0.516440 | 7.4:-40254717 | MS.gene055184:CDS |
| ATGGTCTTGAATTCGAAAAG+AGG | 0.517310 | 7.4:-40256159 | MS.gene055184:CDS |
| TGATGGAAATCTTGGGGAGG+AGG | 0.519562 | 7.4:-40256299 | MS.gene055184:CDS |
| CAGAAATTGAGTGGAAAGCC+AGG | 0.519574 | 7.4:-40254219 | MS.gene055184:CDS |
| GGAGGAGCTTCCTCAGGAGG+CGG | 0.521643 | 7.4:+40254480 | None:intergenic |
| TAAGGAGTGAACTGAGATCC+AGG | 0.526111 | 7.4:+40254582 | None:intergenic |
| ATGCCCATTCCTCCACCACC+TGG | 0.528755 | 7.4:-40254600 | MS.gene055184:CDS |
| TCCTCAAGTGTCATTGGAGG+AGG | 0.532277 | 7.4:+40255491 | None:intergenic |
| GTGCATGCCTGGTCTTGGTG+GGG | 0.532518 | 7.4:+40254683 | None:intergenic |
| ATCATCCCTGATGGTGGATG+AGG | 0.533964 | 7.4:+40254549 | None:intergenic |
| GAAGTCATACCAGGTCTTGG+AGG | 0.534350 | 7.4:+40254810 | None:intergenic |
| ACTGAAGTCATACCAGGTCT+TGG | 0.536230 | 7.4:+40254807 | None:intergenic |
| GGTTTCATGAAATGAAATTG+GGG | 0.538125 | 7.4:+40255797 | None:intergenic |
| GCGAAACAAGATAACGCCTA+TGG | 0.538384 | 7.4:-40255459 | MS.gene055184:CDS |
| GAGGAGGTGCAGCAGGACCA+GGG | 0.541548 | 7.4:+40254829 | None:intergenic |
| TTCTGACGGGATTGACAAGT+AGG | 0.543304 | 7.4:-40255832 | MS.gene055184:CDS |
| TTTGTGGTTTCTCCTATCAC+CGG | 0.544417 | 7.4:-40255215 | MS.gene055184:CDS |
| AGGGAAGAAGAGTGAAGTCA+GGG | 0.544952 | 7.4:-40255327 | MS.gene055184:CDS |
| AGGCTGAGCAGTATACAGTT+AGG | 0.547036 | 7.4:-40255934 | MS.gene055184:CDS |
| ACGAGAAACCACTCTGGCAC+AGG | 0.548179 | 7.4:-40255096 | MS.gene055184:CDS |
| CACCACGCTCTCTCAAGGCT+AGG | 0.548324 | 7.4:+40254136 | None:intergenic |
| TCCCCAAGATTTCCATCAGT+GGG | 0.549023 | 7.4:+40256304 | None:intergenic |
| AGTTTGGAAGACAATGATGA+AGG | 0.550080 | 7.4:-40255347 | MS.gene055184:CDS |
| GGAGCGGGTAGAGGAAGTAT+AGG | 0.550091 | 7.4:+40256328 | None:intergenic |
| CAATCTTTGTCTGAAACTGT+TGG | 0.550457 | 7.4:-40254291 | MS.gene055184:CDS |
| GTGAACTGAGATCCAGGTGG+TGG | 0.552277 | 7.4:+40254588 | None:intergenic |
| ACCTCCTCAAGTGTCATTGG+AGG | 0.553642 | 7.4:+40255488 | None:intergenic |
| GATGGTCACAGCGGTAGTAT+TGG | 0.553821 | 7.4:-40254933 | MS.gene055184:CDS |
| GAATACTGCATGTTATGTAA+AGG | 0.556618 | 7.4:+40254735 | None:intergenic |
| GTCACAAAATATTGGAAGTG+AGG | 0.557834 | 7.4:-40254889 | MS.gene055184:CDS |
| TCAGCATCATCTTCTTCCAT+AGG | 0.558125 | 7.4:+40255443 | None:intergenic |
| TCCAATAGTTCTAGTGTGTG+TGG | 0.560378 | 7.4:+40256246 | None:intergenic |
| GTCATACCAGGTCTTGGAGG+AGG | 0.561127 | 7.4:+40254813 | None:intergenic |
| ACATATATACTGATGCGAGC+AGG | 0.561433 | 7.4:+40254366 | None:intergenic |
| GTGTGTGTGGCAACAGTTGT+CGG | 0.561561 | 7.4:+40256259 | None:intergenic |
| AATGGGAAATCCTTTCTGAC+GGG | 0.564614 | 7.4:-40255845 | MS.gene055184:CDS |
| ACTTGTCAATCCCGTCAGAA+AGG | 0.565178 | 7.4:+40255835 | None:intergenic |
| AGCTCCTCCCTTGTTTCCAG+AGG | 0.565510 | 7.4:-40254466 | MS.gene055184:CDS |
| AGCAGGGAGTTGAATCTCCC+CGG | 0.565840 | 7.4:+40254248 | None:intergenic |
| AGTAGAAATGGATATGGACG+AGG | 0.566282 | 7.4:-40255408 | MS.gene055184:CDS |
| ATCCCCACCGCCGCCTCCTG+AGG | 0.567346 | 7.4:-40254490 | MS.gene055184:CDS |
| TCTACCACCACGCTCTCTCA+AGG | 0.569307 | 7.4:+40254131 | None:intergenic |
| ACTATTAGGAATCAGTTCAC+CGG | 0.579775 | 7.4:+40255196 | None:intergenic |
| CTCCCCAAGATTTCCATCAG+TGG | 0.579945 | 7.4:+40256303 | None:intergenic |
| TGCTGATAATATGCATGATA+GGG | 0.580063 | 7.4:+40256082 | None:intergenic |
| TAATGGGAAATCCTTTCTGA+CGG | 0.581173 | 7.4:-40255846 | MS.gene055184:CDS |
| TGCTTGAAAGATGTGTGAAT+AGG | 0.583530 | 7.4:-40255661 | MS.gene055184:CDS |
| AGAGGCCCAACTTGTTGAAG+AGG | 0.583627 | 7.4:-40255384 | MS.gene055184:CDS |
| TTCAAAGCTAGTCCAGTTGG+TGG | 0.583859 | 7.4:+40254771 | None:intergenic |
| CATGTTATGTAAAGGACCAC+GGG | 0.584405 | 7.4:+40254743 | None:intergenic |
| TTTGATGAAGGAAATCTCAA+AGG | 0.585080 | 7.4:-40254336 | MS.gene055184:CDS |
| GTTTGGAAGACAATGATGAA+GGG | 0.585538 | 7.4:-40255346 | MS.gene055184:CDS |
| CCTGATGGTGGATGAGGGTG+AGG | 0.585720 | 7.4:+40254555 | None:intergenic |
| TCCCACTGATGGAAATCTTG+GGG | 0.587594 | 7.4:-40256305 | MS.gene055184:CDS |
| AAAGCTAGTCCAGTTGGTGG+CGG | 0.588084 | 7.4:+40254774 | None:intergenic |
| GGACGAACTGAAGTCATACC+AGG | 0.589321 | 7.4:+40254801 | None:intergenic |
| GCTGCACCTCCTCCAAGACC+TGG | 0.589894 | 7.4:-40254819 | MS.gene055184:CDS |
| CCTAAGCAGGTTATATGGGA+TGG | 0.590606 | 7.4:-40254951 | MS.gene055184:CDS |
| AGCATTGGAAACCTCTTCCT+CGG | 0.590624 | 7.4:+40255010 | None:intergenic |
| AGATTCAAAGCTAGTCCAGT+TGG | 0.591700 | 7.4:+40254768 | None:intergenic |
| ACCACGCTCTCTCAAGGCTA+GGG | 0.592917 | 7.4:+40254137 | None:intergenic |
| TATGCATGATAGGGATCAGA+CGG | 0.596075 | 7.4:+40256091 | None:intergenic |
| TCCCTAGCCTTGAGAGAGCG+TGG | 0.597079 | 7.4:-40254138 | MS.gene055184:CDS |
| ACTGGAAGAGACCAGAAGAC+AGG | 0.604101 | 7.4:-40255265 | MS.gene055184:CDS |
| TGAAACTGTTGGCAGCCTGA+AGG | 0.606065 | 7.4:-40254280 | MS.gene055184:CDS |
| CTCACCCTCATCCACCATCA+GGG | 0.607170 | 7.4:-40254554 | MS.gene055184:CDS |
| AAGGGAGGAGCTTCCTCAGG+AGG | 0.607480 | 7.4:+40254477 | None:intergenic |
| TCTGACGGGATTGACAAGTA+GGG | 0.611403 | 7.4:-40255831 | MS.gene055184:CDS |
| TGGAAAGCCAGGCTTTCTCA+AGG | 0.611679 | 7.4:-40254208 | MS.gene055184:CDS |
| CCATTATTGATAAAGCCTCT+CGG | 0.611957 | 7.4:-40256195 | MS.gene055184:CDS |
| GGCGGTGGGGATACTCCTTG+AGG | 0.612815 | 7.4:+40254501 | None:intergenic |
| ATAAGCATCATCCCTGATGG+TGG | 0.613914 | 7.4:+40254543 | None:intergenic |
| TCTTGGGGAGGAGGTGATCG+AGG | 0.614190 | 7.4:-40256290 | MS.gene055184:CDS |
| ATTTCCATCAGTGGGAGGAG+CGG | 0.614809 | 7.4:+40256312 | None:intergenic |
| ATCATAAGCATCATCCCTGA+TGG | 0.614902 | 7.4:+40254540 | None:intergenic |
| AAACCTGCACCGGAAACTGA+TGG | 0.615397 | 7.4:-40256034 | MS.gene055184:CDS |
| GAGGCCCAACTTGTTGAAGA+GGG | 0.616284 | 7.4:-40255383 | MS.gene055184:CDS |
| CACTGATGGAAATCTTGGGG+AGG | 0.616691 | 7.4:-40256302 | MS.gene055184:CDS |
| GGAATTGATGGATGCATTGG+GGG | 0.617363 | 7.4:+40254639 | None:intergenic |
| CATCCACCACCTCCACCTCA+AGG | 0.617512 | 7.4:-40254516 | MS.gene055184:CDS |
| GCTAACAAGCAGAAATTGAG+TGG | 0.618988 | 7.4:-40254228 | MS.gene055184:CDS |
| TTCATCATCCTGTGCCAGAG+TGG | 0.619478 | 7.4:+40255088 | None:intergenic |
| TCTGGTTCCTCTGGAAACAA+GGG | 0.620399 | 7.4:+40254459 | None:intergenic |
| GTTTCATGAAATGAAATTGG+GGG | 0.624393 | 7.4:+40255798 | None:intergenic |
| TCAATTCCTATGAATAACCA+AGG | 0.629776 | 7.4:-40254624 | MS.gene055184:CDS |
| TTTCTTTACTGGTTTAAACC+GGG | 0.630709 | 7.4:+40255973 | None:intergenic |
| ATTCACACATCTTTCAAGCA+CGG | 0.630916 | 7.4:+40255664 | None:intergenic |
| AGGAATTGATGGATGCATTG+GGG | 0.631433 | 7.4:+40254638 | None:intergenic |
| AGAAGCCTGATATTTCTGCC+CGG | 0.631478 | 7.4:-40255991 | MS.gene055184:CDS |
| GCATGTTATGTAAAGGACCA+CGG | 0.631905 | 7.4:+40254742 | None:intergenic |
| TCCTGAAGGCATTACAAGGG+AGG | 0.633482 | 7.4:-40255909 | MS.gene055184:CDS |
| GGATTGAGGAAATTAAACTT+GGG | 0.634198 | 7.4:+40256112 | None:intergenic |
| GATCCAGAAATTTATCCTCA+GGG | 0.634230 | 7.4:+40254400 | None:intergenic |
| CCTTTGAATATGCATCAGCA+AGG | 0.634998 | 7.4:+40255744 | None:intergenic |
| CTTTGAATATGCATCAGCAA+GGG | 0.636298 | 7.4:+40255745 | None:intergenic |
| TCGTAGTCAGAAACCTGCAC+CGG | 0.636446 | 7.4:-40256044 | MS.gene055184:CDS |
| ACCTCCTCCAATGACACTTG+AGG | 0.642711 | 7.4:-40255492 | MS.gene055184:CDS |
| CAGAGGAACCAGAACCAAAG+AGG | 0.642866 | 7.4:-40254449 | MS.gene055184:CDS |
| GTATACTGCTCAGCCTCGGG+AGG | 0.644159 | 7.4:+40255941 | None:intergenic |
| TTATTCACAATCCTAATCGG+TGG | 0.645627 | 7.4:+40255287 | None:intergenic |
| CTTGCACATTACAATGTCAG+TGG | 0.646215 | 7.4:-40254174 | MS.gene055184:CDS |
| AATAGACTTTGCTGATGATG+AGG | 0.647412 | 7.4:-40255525 | MS.gene055184:CDS |
| GGTTCCTCTGGAAACAAGGG+AGG | 0.650047 | 7.4:+40254462 | None:intergenic |
| TCCTCCAATGACACTTGAGG+AGG | 0.650135 | 7.4:-40255489 | MS.gene055184:CDS |
| GGTGGGGATACTCCTTGAGG+TGG | 0.652903 | 7.4:+40254504 | None:intergenic |
| AAATTTCTGGATCAGCATCA+GGG | 0.656993 | 7.4:-40254390 | MS.gene055184:CDS |
| GCTTCCTGAAGGCATTACAA+GGG | 0.666795 | 7.4:-40255912 | MS.gene055184:CDS |
| TCATCCCTGATGGTGGATGA+GGG | 0.667117 | 7.4:+40254550 | None:intergenic |
| CGATTCTGCTCTGATCCCTG+AGG | 0.667531 | 7.4:-40254415 | MS.gene055184:CDS |
| CAAAATACGAGAAACCACTC+TGG | 0.669456 | 7.4:-40255102 | MS.gene055184:CDS |
| CCAAGATTTCCATCAGTGGG+AGG | 0.670695 | 7.4:+40256307 | None:intergenic |
| GCACATTACAATGTCAGTGG+AGG | 0.674142 | 7.4:-40254171 | MS.gene055184:CDS |
| TATACAGTTAGGCTTCCTGA+AGG | 0.674309 | 7.4:-40255923 | MS.gene055184:CDS |
| TATGGAAGAAGATGATGCTG+AGG | 0.681247 | 7.4:-40255441 | MS.gene055184:CDS |
| GAAAGTACTTGATCCTCCCG+AGG | 0.684311 | 7.4:-40255954 | MS.gene055184:CDS |
| GAGGTGCAGCAGGACCAGGG+AGG | 0.710329 | 7.4:+40254832 | None:intergenic |
| CTAGCCTTGAGAGAGCGTGG+TGG | 0.725849 | 7.4:-40254135 | MS.gene055184:CDS |
| CTAGCTTTGAATCTACCCCG+TGG | 0.743510 | 7.4:-40254759 | MS.gene055184:CDS |
| GTTATATGGGATGGTCACAG+CGG | 0.750758 | 7.4:-40254942 | MS.gene055184:CDS |
| ATGTTATGTAAAGGACCACG+GGG | 0.788598 | 7.4:+40254744 | None:intergenic |
| GGAGTGAACTGAGATCCAGG+TGG | 0.832532 | 7.4:+40254585 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCTAATCCTAATAGTAT+TGG | - | chr7.4:40255736-40255755 | MS.gene055184:CDS | 20.0% |
| ! | AGATTTCCTTCATCAAAATT+AGG | + | chr7.4:40256114-40256133 | None:intergenic | 25.0% |
| ! | TACAAATTGCTATGATTGAT+TGG | - | chr7.4:40254882-40254901 | MS.gene055184:CDS | 25.0% |
| ! | TGAAATCTCAAAAAACATTG+TGG | - | chr7.4:40255384-40255403 | MS.gene055184:CDS | 25.0% |
| ! | TGGTTTCATGAAATGAAATT+GGG | + | chr7.4:40254660-40254679 | None:intergenic | 25.0% |
| ! | TTGGTTTCATGAAATGAAAT+TGG | + | chr7.4:40254661-40254680 | None:intergenic | 25.0% |
| !!! | TATGTTCCTAATTTTGATGA+AGG | - | chr7.4:40256105-40256124 | MS.gene055184:CDS | 25.0% |
| !!! | TCAATAATGGTTTTAATGTC+TGG | + | chr7.4:40254248-40254267 | None:intergenic | 25.0% |
| AATGTAAACATGTTGTGAGT+TGG | + | chr7.4:40254680-40254699 | None:intergenic | 30.0% | |
| AGTACAAAGAACAGAAAGAA+AGG | - | chr7.4:40255320-40255339 | MS.gene055184:CDS | 30.0% | |
| CAAGCAATGTCACAAAATAT+TGG | - | chr7.4:40255556-40255575 | MS.gene055184:CDS | 30.0% | |
| CAGTTATTCACAATCCTAAT+CGG | + | chr7.4:40255172-40255191 | None:intergenic | 30.0% | |
| GAATACTGCATGTTATGTAA+AGG | + | chr7.4:40255721-40255740 | None:intergenic | 30.0% | |
| GGATTGAGGAAATTAAACTT+GGG | + | chr7.4:40254344-40254363 | None:intergenic | 30.0% | |
| GGTTTCATGAAATGAAATTG+GGG | + | chr7.4:40254659-40254678 | None:intergenic | 30.0% | |
| GTTTCATGAAATGAAATTGG+GGG | + | chr7.4:40254658-40254677 | None:intergenic | 30.0% | |
| TAGAGATTCAACCAAATTTG+TGG | - | chr7.4:40255222-40255241 | MS.gene055184:CDS | 30.0% | |
| TCAATTCCTATGAATAACCA+AGG | - | chr7.4:40255829-40255848 | MS.gene055184:CDS | 30.0% | |
| TCTTTCTGTTCTTTGTACTT+AGG | + | chr7.4:40255319-40255338 | None:intergenic | 30.0% | |
| TGCTGATAATATGCATGATA+GGG | + | chr7.4:40254374-40254393 | None:intergenic | 30.0% | |
| TGGTTATTCATAGGAATTGA+TGG | + | chr7.4:40255829-40255848 | None:intergenic | 30.0% | |
| TGTTCTGACATTTCACTATT+AGG | + | chr7.4:40255274-40255293 | None:intergenic | 30.0% | |
| TTTGATGAAGGAAATCTCAA+AGG | - | chr7.4:40256117-40256136 | MS.gene055184:CDS | 30.0% | |
| ! | CAATATTTTGTGACATTGCT+TGG | + | chr7.4:40255558-40255577 | None:intergenic | 30.0% |
| !! | CTTTCTTTACTGGTTTAAAC+CGG | + | chr7.4:40254484-40254503 | None:intergenic | 30.0% |
| !! | TTTCTTTACTGGTTTAAACC+GGG | + | chr7.4:40254483-40254502 | None:intergenic | 30.0% |
| !!! | ATAATGGTTTTAATGTCTGG+AGG | + | chr7.4:40254245-40254264 | None:intergenic | 30.0% |
| !!! | TAATGGTTTTAATGTCTGGA+GGG | + | chr7.4:40254244-40254263 | None:intergenic | 30.0% |
| AAAGCTTACAGCACAATTTG+TGG | - | chr7.4:40254580-40254599 | MS.gene055184:CDS | 35.0% | |
| AAATCTCAAAGGACAAGTTC+TGG | - | chr7.4:40256128-40256147 | MS.gene055184:CDS | 35.0% | |
| AATGAATCTAAAAACCTCCC+TGG | - | chr7.4:40255607-40255626 | MS.gene055184:CDS | 35.0% | |
| AATTTCAGCCTTAACAGCAT+TGG | + | chr7.4:40255461-40255480 | None:intergenic | 35.0% | |
| ACTATTAGGAATCAGTTCAC+CGG | + | chr7.4:40255260-40255279 | None:intergenic | 35.0% | |
| AGTTTGGAAGACAATGATGA+AGG | - | chr7.4:40255106-40255125 | MS.gene055184:CDS | 35.0% | |
| ATGTGTGAATAGGCTAGAAT+GGG | - | chr7.4:40254802-40254821 | MS.gene055184:CDS | 35.0% | |
| ATTCACACATCTTTCAAGCA+CGG | + | chr7.4:40254792-40254811 | None:intergenic | 35.0% | |
| ATTGGAAGGCCAATACTATT+AGG | + | chr7.4:40255748-40255767 | None:intergenic | 35.0% | |
| CCATTATTGATAAAGCCTCT+CGG | - | chr7.4:40254258-40254277 | MS.gene055184:CDS | 35.0% | |
| CGATTAGGATTGTGAATAAC+TGG | - | chr7.4:40255170-40255189 | MS.gene055184:CDS | 35.0% | |
| CGGATTGAGGAAATTAAACT+TGG | + | chr7.4:40254345-40254364 | None:intergenic | 35.0% | |
| CTTTGAATATGCATCAGCAA+GGG | + | chr7.4:40254711-40254730 | None:intergenic | 35.0% | |
| GAAATTAAACTTGGGATTGC+TGG | + | chr7.4:40254336-40254355 | None:intergenic | 35.0% | |
| GAAGGAAGTAGAAATGGATA+TGG | - | chr7.4:40255039-40255058 | MS.gene055184:CDS | 35.0% | |
| GATAGGAGAAACCACAAATT+TGG | + | chr7.4:40255236-40255255 | None:intergenic | 35.0% | |
| GATCCAGAAATTTATCCTCA+GGG | + | chr7.4:40256056-40256075 | None:intergenic | 35.0% | |
| GGATCAAGTACTTTCTTTAC+TGG | + | chr7.4:40254494-40254513 | None:intergenic | 35.0% | |
| GTCACAAAATATTGGAAGTG+AGG | - | chr7.4:40255564-40255583 | MS.gene055184:CDS | 35.0% | |
| GTTTGGAAGACAATGATGAA+GGG | - | chr7.4:40255107-40255126 | MS.gene055184:CDS | 35.0% | |
| TAATGGGAAATCCTTTCTGA+CGG | - | chr7.4:40254607-40254626 | MS.gene055184:CDS | 35.0% | |
| TCGGTAGTACCAAAAATATC+AGG | + | chr7.4:40255427-40255446 | None:intergenic | 35.0% | |
| TGATCCAGAAATTTATCCTC+AGG | + | chr7.4:40256057-40256076 | None:intergenic | 35.0% | |
| TGCTTGAAAGATGTGTGAAT+AGG | - | chr7.4:40254792-40254811 | MS.gene055184:CDS | 35.0% | |
| TTATTCACAATCCTAATCGG+TGG | + | chr7.4:40255169-40255188 | None:intergenic | 35.0% | |
| TTGGTTGAATCTCTATATGC+AGG | + | chr7.4:40255217-40255236 | None:intergenic | 35.0% | |
| ! | AAATTTCTGGATCAGCATCA+GGG | - | chr7.4:40256063-40256082 | MS.gene055184:CDS | 35.0% |
| ! | AATAGACTTTGCTGATGATG+AGG | - | chr7.4:40254928-40254947 | MS.gene055184:CDS | 35.0% |
| ! | ATAGGAATTGATGGATGCAT+TGG | + | chr7.4:40255820-40255839 | None:intergenic | 35.0% |
| ! | ATGGTCTTGAATTCGAAAAG+AGG | - | chr7.4:40254294-40254313 | MS.gene055184:CDS | 35.0% |
| ! | CAATCTTTGTCTGAAACTGT+TGG | - | chr7.4:40256162-40256181 | MS.gene055184:CDS | 35.0% |
| ! | GATTGATTGGCATGATTTTG+TGG | - | chr7.4:40254895-40254914 | MS.gene055184:CDS | 35.0% |
| ! | GTGCTGATAATATGCATGAT+AGG | + | chr7.4:40254375-40254394 | None:intergenic | 35.0% |
| ! | TAAATTTCTGGATCAGCATC+AGG | - | chr7.4:40256062-40256081 | MS.gene055184:CDS | 35.0% |
| ! | TAGGAATTGATGGATGCATT+GGG | + | chr7.4:40255819-40255838 | None:intergenic | 35.0% |
| ! | TCAATTTCTGCTTGTTAGCA+GGG | + | chr7.4:40256224-40256243 | None:intergenic | 35.0% |
| !!! | AATGGTTTTAATGTCTGGAG+GGG | + | chr7.4:40254243-40254262 | None:intergenic | 35.0% |
| !!! | TGATATTTTTGGTACTACCG+AGG | - | chr7.4:40255426-40255445 | MS.gene055184:CDS | 35.0% |
| AAATGATGAGCAACCTAAGC+AGG | - | chr7.4:40255489-40255508 | MS.gene055184:CDS | 40.0% | |
| AAGAAGATGATGCTGAGGTA+GGG | - | chr7.4:40255017-40255036 | MS.gene055184:CDS | 40.0% | |
| AATGGGAAATCCTTTCTGAC+GGG | - | chr7.4:40254608-40254627 | MS.gene055184:CDS | 40.0% | |
| ACATATATACTGATGCGAGC+AGG | + | chr7.4:40256090-40256109 | None:intergenic | 40.0% | |
| ACATCGTTACCATCAGTTTC+CGG | + | chr7.4:40254431-40254450 | None:intergenic | 40.0% | |
| AGAGGTTTCCAATGCTGTTA+AGG | - | chr7.4:40255450-40255469 | MS.gene055184:CDS | 40.0% | |
| AGATTCAAAGCTAGTCCAGT+TGG | + | chr7.4:40255688-40255707 | None:intergenic | 40.0% | |
| AGCAACCTAAGCAGGTTATA+TGG | - | chr7.4:40255497-40255516 | MS.gene055184:CDS | 40.0% | |
| AGCCTGAAGGAAAAAATTGC+CGG | - | chr7.4:40256186-40256205 | MS.gene055184:CDS | 40.0% | |
| AGTAGAAATGGATATGGACG+AGG | - | chr7.4:40255045-40255064 | MS.gene055184:CDS | 40.0% | |
| ATATTGTCCTTGAGAAAGCC+TGG | + | chr7.4:40256255-40256274 | None:intergenic | 40.0% | |
| ATCATAAGCATCATCCCTGA+TGG | + | chr7.4:40255916-40255935 | None:intergenic | 40.0% | |
| ATGTTATGTAAAGGACCACG+GGG | + | chr7.4:40255712-40255731 | None:intergenic | 40.0% | |
| CAAAATACGAGAAACCACTC+TGG | - | chr7.4:40255351-40255370 | MS.gene055184:CDS | 40.0% | |
| CACAATTTGTGGCTCGTAAT+GGG | - | chr7.4:40254591-40254610 | MS.gene055184:CDS | 40.0% | |
| CATGTTATGTAAAGGACCAC+GGG | + | chr7.4:40255713-40255732 | None:intergenic | 40.0% | |
| CCTTGCTGATGCATATTCAA+AGG | - | chr7.4:40254709-40254728 | MS.gene055184:CDS | 40.0% | |
| CCTTTGAATATGCATCAGCA+AGG | + | chr7.4:40254712-40254731 | None:intergenic | 40.0% | |
| CTTGCACATTACAATGTCAG+TGG | - | chr7.4:40256279-40256298 | MS.gene055184:CDS | 40.0% | |
| GATCCCTGAGGATAAATTTC+TGG | - | chr7.4:40256050-40256069 | MS.gene055184:CDS | 40.0% | |
| GATGTGTGAATAGGCTAGAA+TGG | - | chr7.4:40254801-40254820 | MS.gene055184:CDS | 40.0% | |
| GCAACCTAAGCAGGTTATAT+GGG | - | chr7.4:40255498-40255517 | MS.gene055184:CDS | 40.0% | |
| GCATGTTATGTAAAGGACCA+CGG | + | chr7.4:40255714-40255733 | None:intergenic | 40.0% | |
| GCTAACAAGCAGAAATTGAG+TGG | - | chr7.4:40256225-40256244 | MS.gene055184:CDS | 40.0% | |
| GGCATTCCTTGGTTATTCAT+AGG | + | chr7.4:40255838-40255857 | None:intergenic | 40.0% | |
| TATACAGTTAGGCTTCCTGA+AGG | - | chr7.4:40254530-40254549 | MS.gene055184:CDS | 40.0% | |
| TATGCATGATAGGGATCAGA+CGG | + | chr7.4:40254365-40254384 | None:intergenic | 40.0% | |
| TATGGAAGAAGATGATGCTG+AGG | - | chr7.4:40255012-40255031 | MS.gene055184:CDS | 40.0% | |
| TCAGCATCATCTTCTTCCAT+AGG | + | chr7.4:40255013-40255032 | None:intergenic | 40.0% | |
| TCGTCATACTTCATCCTCTT+TGG | + | chr7.4:40256021-40256040 | None:intergenic | 40.0% | |
| TTAAACCGGGCAGAAATATC+AGG | + | chr7.4:40254470-40254489 | None:intergenic | 40.0% | |
| TTTGTGGTTTCTCCTATCAC+CGG | - | chr7.4:40255238-40255257 | MS.gene055184:CDS | 40.0% | |
| ! | AGGAATTGATGGATGCATTG+GGG | + | chr7.4:40255818-40255837 | None:intergenic | 40.0% |
| ! | CAGAGTGGTTTCTCGTATTT+TGG | + | chr7.4:40255353-40255372 | None:intergenic | 40.0% |
| ! | CCGAGAGGCTTTATCAATAA+TGG | + | chr7.4:40254261-40254280 | None:intergenic | 40.0% |
| ! | CGTACTCGTCCTGATATTTT+TGG | - | chr7.4:40255415-40255434 | MS.gene055184:CDS | 40.0% |
| ! | CTCAATTTCTGCTTGTTAGC+AGG | + | chr7.4:40256225-40256244 | None:intergenic | 40.0% |
| ! | TACTTCATCCTCTTTGGTTC+TGG | + | chr7.4:40256015-40256034 | None:intergenic | 40.0% |
| ! | TCTCGGTTCGTTGCTAAAAA+TGG | - | chr7.4:40254275-40254294 | MS.gene055184:CDS | 40.0% |
| ! | TGATTGGCATGATTTTGTGG+TGG | - | chr7.4:40254898-40254917 | MS.gene055184:CDS | 40.0% |
| ! | TGGTAACGATGTAGCAACTA+TGG | - | chr7.4:40254439-40254458 | MS.gene055184:CDS | 40.0% |
| !! | AAAGGTTTTGATGCCTCCAA+AGG | - | chr7.4:40254727-40254746 | MS.gene055184:CDS | 40.0% |
| !! | AAGGTTTTGATGCCTCCAAA+GGG | - | chr7.4:40254728-40254747 | MS.gene055184:CDS | 40.0% |
| !! | ACAAGAGCACTCTAGGAAAA+AGG | - | chr7.4:40254832-40254851 | MS.gene055184:CDS | 40.0% |
| !! | TCCAATAGTTCTAGTGTGTG+TGG | + | chr7.4:40254210-40254229 | None:intergenic | 40.0% |
| !!! | ATGGTTTTAATGTCTGGAGG+GGG | + | chr7.4:40254242-40254261 | None:intergenic | 40.0% |
| !!! | ATTTTTAGCAACGAACCGAG+AGG | + | chr7.4:40254276-40254295 | None:intergenic | 40.0% |
| AACTGTATACTGCTCAGCCT+CGG | + | chr7.4:40254519-40254538 | None:intergenic | 45.0% | |
| AAGGGAAGAAGAGTGAAGTC+AGG | - | chr7.4:40255125-40255144 | MS.gene055184:CDS | 45.0% | |
| AATGGATATGGACGAGGAAG+AGG | - | chr7.4:40255051-40255070 | MS.gene055184:CDS | 45.0% | |
| ACAATCCTAATCGGTGGTTC+AGG | + | chr7.4:40255163-40255182 | None:intergenic | 45.0% | |
| ACTGAAGTCATACCAGGTCT+TGG | + | chr7.4:40255649-40255668 | None:intergenic | 45.0% | |
| ACTTGTCAATCCCGTCAGAA+AGG | + | chr7.4:40254621-40254640 | None:intergenic | 45.0% | |
| AGGCTGAGCAGTATACAGTT+AGG | - | chr7.4:40254519-40254538 | MS.gene055184:CDS | 45.0% | |
| AGGGAAGAAGAGTGAAGTCA+GGG | - | chr7.4:40255126-40255145 | MS.gene055184:CDS | 45.0% | |
| ATAAGCATCATCCCTGATGG+TGG | + | chr7.4:40255913-40255932 | None:intergenic | 45.0% | |
| ATCACCTCCTCAAGTGTCAT+TGG | + | chr7.4:40254971-40254990 | None:intergenic | 45.0% | |
| CAATCCTAATCGGTGGTTCA+GGG | + | chr7.4:40255162-40255181 | None:intergenic | 45.0% | |
| CAGAAATTGAGTGGAAAGCC+AGG | - | chr7.4:40256234-40256253 | MS.gene055184:CDS | 45.0% | |
| CCATCCCATATAACCTGCTT+AGG | + | chr7.4:40255505-40255524 | None:intergenic | 45.0% | |
| CCTAAGCAGGTTATATGGGA+TGG | - | chr7.4:40255502-40255521 | MS.gene055184:CDS | 45.0% | |
| CCTGAAGGAAAAAATTGCCG+GGG | - | chr7.4:40256188-40256207 | MS.gene055184:CDS | 45.0% | |
| CGTTCCCTCTTCAACAAGTT+GGG | + | chr7.4:40255077-40255096 | None:intergenic | 45.0% | |
| CTCCCACTGATGGAAATCTT+GGG | - | chr7.4:40254147-40254166 | MS.gene055184:CDS | 45.0% | |
| GAAGAAGATGATGCTGAGGT+AGG | - | chr7.4:40255016-40255035 | MS.gene055184:CDS | 45.0% | |
| GCACAATTTGTGGCTCGTAA+TGG | - | chr7.4:40254590-40254609 | MS.gene055184:CDS | 45.0% | |
| GCACATTACAATGTCAGTGG+AGG | - | chr7.4:40256282-40256301 | MS.gene055184:CDS | 45.0% | |
| GCCACACACACTAGAACTAT+TGG | - | chr7.4:40254206-40254225 | MS.gene055184:CDS | 45.0% | |
| GCCTGAAGGAAAAAATTGCC+GGG | - | chr7.4:40256187-40256206 | MS.gene055184:CDS | 45.0% | |
| GCGAAACAAGATAACGCCTA+TGG | - | chr7.4:40254994-40255013 | MS.gene055184:CDS | 45.0% | |
| GGTAGGGAAGGAAGTAGAAA+TGG | - | chr7.4:40255033-40255052 | MS.gene055184:CDS | 45.0% | |
| GTTATATGGGATGGTCACAG+CGG | - | chr7.4:40255511-40255530 | MS.gene055184:CDS | 45.0% | |
| TAAGGAGTGAACTGAGATCC+AGG | + | chr7.4:40255874-40255893 | None:intergenic | 45.0% | |
| TCCCACTGATGGAAATCTTG+GGG | - | chr7.4:40254148-40254167 | MS.gene055184:CDS | 45.0% | |
| TCCCCAAGATTTCCATCAGT+GGG | + | chr7.4:40254152-40254171 | None:intergenic | 45.0% | |
| TCGTTCCCTCTTCAACAAGT+TGG | + | chr7.4:40255078-40255097 | None:intergenic | 45.0% | |
| TCTGACGGGATTGACAAGTA+GGG | - | chr7.4:40254622-40254641 | MS.gene055184:CDS | 45.0% | |
| TGACACTTGAGGAGGTGATA+AGG | - | chr7.4:40254972-40254991 | MS.gene055184:CDS | 45.0% | |
| TTCAAAGCTAGTCCAGTTGG+TGG | + | chr7.4:40255685-40255704 | None:intergenic | 45.0% | |
| TTCTGACGGGATTGACAAGT+AGG | - | chr7.4:40254621-40254640 | MS.gene055184:CDS | 45.0% | |
| ! | AGAAGCCTGATATTTCTGCC+CGG | - | chr7.4:40254462-40254481 | MS.gene055184:CDS | 45.0% |
| ! | AGCATTGGAAACCTCTTCCT+CGG | + | chr7.4:40255446-40255465 | None:intergenic | 45.0% |
| ! | GGAATTGATGGATGCATTGG+GGG | + | chr7.4:40255817-40255836 | None:intergenic | 45.0% |
| ! | TCTGGTTCCTCTGGAAACAA+GGG | + | chr7.4:40255997-40256016 | None:intergenic | 45.0% |
| ! | TTTTGGTACTACCGAGGAAG+AGG | - | chr7.4:40255432-40255451 | MS.gene055184:CDS | 45.0% |
| !! | AGGTTTTGATGCCTCCAAAG+GGG | - | chr7.4:40254729-40254748 | MS.gene055184:CDS | 45.0% |
| !! | AGTGTTCACAAGAGCACTCT+AGG | - | chr7.4:40254825-40254844 | MS.gene055184:CDS | 45.0% |
| !! | GCTTCCTGAAGGCATTACAA+GGG | - | chr7.4:40254541-40254560 | MS.gene055184:CDS | 45.0% |
| !! | TTCTGGTTCCTCTGGAAACA+AGG | + | chr7.4:40255998-40256017 | None:intergenic | 45.0% |
| !!! | TGGTTTTAATGTCTGGAGGG+GGG | + | chr7.4:40254241-40254260 | None:intergenic | 45.0% |
| AAACCTGCACCGGAAACTGA+TGG | - | chr7.4:40254419-40254438 | MS.gene055184:CDS | 50.0% | |
| ACCTCCTCCAATGACACTTG+AGG | - | chr7.4:40254961-40254980 | MS.gene055184:CDS | 50.0% | |
| ACTGGAAGAGACCAGAAGAC+AGG | - | chr7.4:40255188-40255207 | MS.gene055184:CDS | 50.0% | |
| ACTGTATACTGCTCAGCCTC+GGG | + | chr7.4:40254518-40254537 | None:intergenic | 50.0% | |
| AGATGATGCTGAGGTAGGGA+AGG | - | chr7.4:40255021-40255040 | MS.gene055184:CDS | 50.0% | |
| AGCTTCTCTGTCAACCCCTT+TGG | + | chr7.4:40254746-40254765 | None:intergenic | 50.0% | |
| ATTTCCATCAGTGGGAGGAG+CGG | + | chr7.4:40254144-40254163 | None:intergenic | 50.0% | |
| CACTGATGGAAATCTTGGGG+AGG | - | chr7.4:40254151-40254170 | MS.gene055184:CDS | 50.0% | |
| CAGAGGAACCAGAACCAAAG+AGG | - | chr7.4:40256004-40256023 | MS.gene055184:CDS | 50.0% | |
| CCAAGATTTCCATCAGTGGG+AGG | + | chr7.4:40254149-40254168 | None:intergenic | 50.0% | |
| CCTCCCACTGATGGAAATCT+TGG | - | chr7.4:40254146-40254165 | MS.gene055184:CDS | 50.0% | |
| CTCCCCAAGATTTCCATCAG+TGG | + | chr7.4:40254153-40254172 | None:intergenic | 50.0% | |
| GAAGTCATACCAGGTCTTGG+AGG | + | chr7.4:40255646-40255665 | None:intergenic | 50.0% | |
| GATGGTCACAGCGGTAGTAT+TGG | - | chr7.4:40255520-40255539 | MS.gene055184:CDS | 50.0% | |
| GGAATCAGTTCACCGGTGAT+AGG | + | chr7.4:40255253-40255272 | None:intergenic | 50.0% | |
| GGACGAACTGAAGTCATACC+AGG | + | chr7.4:40255655-40255674 | None:intergenic | 50.0% | |
| GGATGAGGGTGAGGAACATA+AGG | + | chr7.4:40255892-40255911 | None:intergenic | 50.0% | |
| GTGTGTGTGGCAACAGTTGT+CGG | + | chr7.4:40254197-40254216 | None:intergenic | 50.0% | |
| TATGCAGGAAGCCTGTCTTC+TGG | + | chr7.4:40255202-40255221 | None:intergenic | 50.0% | |
| TCCTCCAATGACACTTGAGG+AGG | - | chr7.4:40254964-40254983 | MS.gene055184:CDS | 50.0% | |
| TCCTCCCTTGTAATGCCTTC+AGG | + | chr7.4:40254548-40254567 | None:intergenic | 50.0% | |
| TCGTAGTCAGAAACCTGCAC+CGG | - | chr7.4:40254409-40254428 | MS.gene055184:CDS | 50.0% | |
| TGAAACTGTTGGCAGCCTGA+AGG | - | chr7.4:40256173-40256192 | MS.gene055184:CDS | 50.0% | |
| TGATGGAAATCTTGGGGAGG+AGG | - | chr7.4:40254154-40254173 | MS.gene055184:CDS | 50.0% | |
| TGCACATGACGCAATCTCTC+CGG | - | chr7.4:40255788-40255807 | MS.gene055184:CDS | 50.0% | |
| TGGAAAGCCAGGCTTTCTCA+AGG | - | chr7.4:40256245-40256264 | MS.gene055184:CDS | 50.0% | |
| TTACCATCAGTTTCCGGTGC+AGG | + | chr7.4:40254425-40254444 | None:intergenic | 50.0% | |
| TTCATCATCCTGTGCCAGAG+TGG | + | chr7.4:40255368-40255387 | None:intergenic | 50.0% | |
| TTCTCTGTCAACCCCTTTGG+AGG | + | chr7.4:40254743-40254762 | None:intergenic | 50.0% | |
| ! | AAGACCCTGAACCACCGATT+AGG | - | chr7.4:40255155-40255174 | MS.gene055184:CDS | 50.0% |
| ! | ACCTCCTCAAGTGTCATTGG+AGG | + | chr7.4:40254968-40254987 | None:intergenic | 50.0% |
| ! | ATTGATGGATGCATTGGGGG+TGG | + | chr7.4:40255814-40255833 | None:intergenic | 50.0% |
| ! | TCCTCAAGTGTCATTGGAGG+AGG | + | chr7.4:40254965-40254984 | None:intergenic | 50.0% |
| !! | AAAGCTAGTCCAGTTGGTGG+CGG | + | chr7.4:40255682-40255701 | None:intergenic | 50.0% |
| !! | AGAGGCCCAACTTGTTGAAG+AGG | - | chr7.4:40255069-40255088 | MS.gene055184:CDS | 50.0% |
| !! | ATCATCCCTGATGGTGGATG+AGG | + | chr7.4:40255907-40255926 | None:intergenic | 50.0% |
| !! | CTAGCTTTGAATCTACCCCG+TGG | - | chr7.4:40255694-40255713 | MS.gene055184:CDS | 50.0% |
| !! | CTCTTTGGTTCTGGTTCCTC+TGG | + | chr7.4:40256006-40256025 | None:intergenic | 50.0% |
| !! | GAAAGTACTTGATCCTCCCG+AGG | - | chr7.4:40254499-40254518 | MS.gene055184:CDS | 50.0% |
| !! | GAGGCCCAACTTGTTGAAGA+GGG | - | chr7.4:40255070-40255089 | MS.gene055184:CDS | 50.0% |
| !! | GATAGGGATCAGACGGATTG+AGG | + | chr7.4:40254358-40254377 | None:intergenic | 50.0% |
| !! | GGCTTCCTGAAGGCATTACA+AGG | - | chr7.4:40254540-40254559 | MS.gene055184:CDS | 50.0% |
| !! | TCATCCCTGATGGTGGATGA+GGG | + | chr7.4:40255906-40255925 | None:intergenic | 50.0% |
| !! | TCCTGAAGGCATTACAAGGG+AGG | - | chr7.4:40254544-40254563 | MS.gene055184:CDS | 50.0% |
| !!! | CCCCGGCAATTTTTTCCTTC+AGG | + | chr7.4:40256191-40256210 | None:intergenic | 50.0% |
| AACAAGGGAGGAGCTTCCTC+AGG | + | chr7.4:40255982-40256001 | None:intergenic | 55.0% | |
| ACCACGCTCTCTCAAGGCTA+GGG | + | chr7.4:40256319-40256338 | None:intergenic | 55.0% | |
| ACGAGAAACCACTCTGGCAC+AGG | - | chr7.4:40255357-40255376 | MS.gene055184:CDS | 55.0% | |
| AGCAGGGAGTTGAATCTCCC+CGG | + | chr7.4:40256208-40256227 | None:intergenic | 55.0% | |
| CGATTCTGCTCTGATCCCTG+AGG | - | chr7.4:40256038-40256057 | MS.gene055184:CDS | 55.0% | |
| CTCACCCTCATCCACCATCA+GGG | - | chr7.4:40255899-40255918 | MS.gene055184:CDS | 55.0% | |
| GATACTCCTTGAGGTGGAGG+TGG | + | chr7.4:40255946-40255965 | None:intergenic | 55.0% | |
| GATTGCGTCATGTGCATGCC+TGG | + | chr7.4:40255784-40255803 | None:intergenic | 55.0% | |
| GGAGTGAACTGAGATCCAGG+TGG | + | chr7.4:40255871-40255890 | None:intergenic | 55.0% | |
| GGGAACGAGAGCTGCTAGTT+TGG | - | chr7.4:40255090-40255109 | MS.gene055184:CDS | 55.0% | |
| GTCATACCAGGTCTTGGAGG+AGG | + | chr7.4:40255643-40255662 | None:intergenic | 55.0% | |
| GTCATGTGCATGCCTGGTCT+TGG | + | chr7.4:40255778-40255797 | None:intergenic | 55.0% | |
| GTCTTGGTGGGGGAATTGGA+AGG | + | chr7.4:40255762-40255781 | None:intergenic | 55.0% | |
| GTGAACTGAGATCCAGGTGG+TGG | + | chr7.4:40255868-40255887 | None:intergenic | 55.0% | |
| GTGGAGGAATGGGCATTCCT+TGG | + | chr7.4:40255849-40255868 | None:intergenic | 55.0% | |
| TCTACCACCACGCTCTCTCA+AGG | + | chr7.4:40256325-40256344 | None:intergenic | 55.0% | |
| TTTCCATCAGTGGGAGGAGC+GGG | + | chr7.4:40254143-40254162 | None:intergenic | 55.0% | |
| ! | AACTGAGATCCAGGTGGTGG+AGG | + | chr7.4:40255865-40255884 | None:intergenic | 55.0% |
| ! | AGCTCCTCCCTTGTTTCCAG+AGG | - | chr7.4:40255987-40256006 | MS.gene055184:CDS | 55.0% |
| ! | GGAGCGGGTAGAGGAAGTAT+AGG | + | chr7.4:40254128-40254147 | None:intergenic | 55.0% |
| ! | GGTTCCTCTGGAAACAAGGG+AGG | + | chr7.4:40255994-40256013 | None:intergenic | 55.0% |
| !! | AGATCCAGGTGGTGGAGGAA+TGG | + | chr7.4:40255860-40255879 | None:intergenic | 55.0% |
| !! | ATGTGCATGCCTGGTCTTGG+TGG | + | chr7.4:40255775-40255794 | None:intergenic | 55.0% |
| !! | GATCCAGGTGGTGGAGGAAT+GGG | + | chr7.4:40255859-40255878 | None:intergenic | 55.0% |
| !! | TGTGCATGCCTGGTCTTGGT+GGG | + | chr7.4:40255774-40255793 | None:intergenic | 55.0% |
| AAGGGAGGAGCTTCCTCAGG+AGG | + | chr7.4:40255979-40255998 | None:intergenic | 60.0% | |
| ACTCCTTGAGGTGGAGGTGG+TGG | + | chr7.4:40255943-40255962 | None:intergenic | 60.0% | |
| ATGCCCATTCCTCCACCACC+TGG | - | chr7.4:40255853-40255872 | MS.gene055184:CDS | 60.0% | |
| ATGGATGCATTGGGGGTGGC+CGG | + | chr7.4:40255810-40255829 | None:intergenic | 60.0% | |
| CACCACGCTCTCTCAAGGCT+AGG | + | chr7.4:40256320-40256339 | None:intergenic | 60.0% | |
| CATCCACCACCTCCACCTCA+AGG | - | chr7.4:40255937-40255956 | MS.gene055184:CDS | 60.0% | |
| CCAATTCCCCCACCAAGACC+AGG | - | chr7.4:40255763-40255782 | MS.gene055184:CDS | 60.0% | |
| CCTCACCCTCATCCACCATC+AGG | - | chr7.4:40255898-40255917 | MS.gene055184:CDS | 60.0% | |
| GGGGATACTCCTTGAGGTGG+AGG | + | chr7.4:40255949-40255968 | None:intergenic | 60.0% | |
| GGTGGGGATACTCCTTGAGG+TGG | + | chr7.4:40255952-40255971 | None:intergenic | 60.0% | |
| GTATACTGCTCAGCCTCGGG+AGG | + | chr7.4:40254515-40254534 | None:intergenic | 60.0% | |
| TCTTGGGGAGGAGGTGATCG+AGG | - | chr7.4:40254163-40254182 | MS.gene055184:CDS | 60.0% | |
| !! | AGTCCAGTTGGTGGCGGAAG+AGG | + | chr7.4:40255676-40255695 | None:intergenic | 60.0% |
| !! | CCTGATGGTGGATGAGGGTG+AGG | + | chr7.4:40255901-40255920 | None:intergenic | 60.0% |
| !! | CCTGGTCTTGGTGGGGGAAT+TGG | + | chr7.4:40255766-40255785 | None:intergenic | 60.0% |
| !! | CTAGCCTTGAGAGAGCGTGG+TGG | - | chr7.4:40256318-40256337 | MS.gene055184:CDS | 60.0% |
| !! | GTGCATGCCTGGTCTTGGTG+GGG | + | chr7.4:40255773-40255792 | None:intergenic | 60.0% |
| !! | TCCCTAGCCTTGAGAGAGCG+TGG | - | chr7.4:40256315-40256334 | MS.gene055184:CDS | 60.0% |
| !! | TGCATGCCTGGTCTTGGTGG+GGG | + | chr7.4:40255772-40255791 | None:intergenic | 60.0% |
| CGTCCTCTTCCGCCACCAAC+TGG | - | chr7.4:40255670-40255689 | MS.gene055184:CDS | 65.0% | |
| CTACCCGCTCCTCCCACTGA+TGG | - | chr7.4:40254137-40254156 | MS.gene055184:CDS | 65.0% | |
| GCTGCACCTCCTCCAAGACC+TGG | - | chr7.4:40255634-40255653 | MS.gene055184:CDS | 65.0% | |
| GGAGGAGCTTCCTCAGGAGG+CGG | + | chr7.4:40255976-40255995 | None:intergenic | 65.0% | |
| GGCGGTGGGGATACTCCTTG+AGG | + | chr7.4:40255955-40255974 | None:intergenic | 65.0% | |
| TCAGTGGGAGGAGCGGGTAG+AGG | + | chr7.4:40254137-40254156 | None:intergenic | 65.0% | |
| ! | GAGGAGGTGCAGCAGGACCA+GGG | + | chr7.4:40255627-40255646 | None:intergenic | 65.0% |
| ! | GGTCTTGGAGGAGGTGCAGC+AGG | + | chr7.4:40255634-40255653 | None:intergenic | 65.0% |
| CTTCCTCAGGAGGCGGCGGT+GGG | + | chr7.4:40255969-40255988 | None:intergenic | 70.0% | |
| GAGGTGCAGCAGGACCAGGG+AGG | + | chr7.4:40255624-40255643 | None:intergenic | 70.0% | |
| GGAGCTTCCTCAGGAGGCGG+CGG | + | chr7.4:40255973-40255992 | None:intergenic | 70.0% | |
| TTCCTCAGGAGGCGGCGGTG+GGG | + | chr7.4:40255968-40255987 | None:intergenic | 70.0% | |
| ! | GGAGGAGGTGCAGCAGGACC+AGG | + | chr7.4:40255628-40255647 | None:intergenic | 70.0% |
| ATCCCCACCGCCGCCTCCTG+AGG | - | chr7.4:40255963-40255982 | MS.gene055184:CDS | 75.0% | |
| GCTTCCTCAGGAGGCGGCGG+TGG | + | chr7.4:40255970-40255989 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 40254122 | 40256353 | 40254122 | ID=MS.gene055184 |
| chr7.4 | mRNA | 40254122 | 40256353 | 40254122 | ID=MS.gene055184.t1;Parent=MS.gene055184 |
| chr7.4 | exon | 40254122 | 40256353 | 40254122 | ID=MS.gene055184.t1.exon1;Parent=MS.gene055184.t1 |
| chr7.4 | CDS | 40254122 | 40256353 | 40254122 | ID=cds.MS.gene055184.t1;Parent=MS.gene055184.t1 |
| Gene Sequence |
| Protein sequence |
