Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055186.t1 | GAU12858.1 | 76.1 | 809 | 107 | 8 | 1 | 724 | 1 | 808 | 5.60E-299 | 1036.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055186.t1 | Q8RXF1 | 60.2 | 800 | 227 | 13 | 1 | 724 | 1 | 785 | 5.8e-204 | 712.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055186.t1 | A0A2Z6LKS9 | 76.1 | 809 | 107 | 8 | 1 | 724 | 1 | 808 | 4.0e-299 | 1036.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73791 | MS.gene055186 | PPI |
| MS.gene055186 | MS.gene022734 | PPI |
| MS.gene055186 | MS.gene013791 | PPI |
| MS.gene055186 | MS.gene02577 | PPI |
| MS.gene055186 | MS.gene46271 | PPI |
| MS.gene013796 | MS.gene055186 | PPI |
| MS.gene06729 | MS.gene055186 | PPI |
| MS.gene055186 | MS.gene73790 | PPI |
| MS.gene055186 | MS.gene52116 | PPI |
| MS.gene06946 | MS.gene055186 | PPI |
| MS.gene055186 | MS.gene46269 | PPI |
| MS.gene055186 | MS.gene020229 | PPI |
| MS.gene055186 | MS.gene03206 | PPI |
| MS.gene055186 | MS.gene013607 | PPI |
| MS.gene055186 | MS.gene39316 | PPI |
| MS.gene057666 | MS.gene055186 | PPI |
| MS.gene055186 | MS.gene003478 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055186.t1 | MTR_8g106170 | 81.638 | 806 | 63 | 10 | 1 | 724 | 2 | 804 | 0.0 | 1061 |
| MS.gene055186.t1 | MTR_7g063860 | 75.943 | 424 | 46 | 4 | 338 | 724 | 23 | 427 | 8.41e-150 | 443 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055186.t1 | AT1G14650 | 60.777 | 798 | 226 | 13 | 1 | 724 | 1 | 785 | 0.0 | 758 |
| MS.gene055186.t1 | AT1G14650 | 60.777 | 798 | 226 | 13 | 1 | 724 | 1 | 785 | 0.0 | 758 |
| MS.gene055186.t1 | AT1G14650 | 60.777 | 798 | 226 | 13 | 1 | 724 | 1 | 785 | 0.0 | 758 |
| MS.gene055186.t1 | AT1G14640 | 54.449 | 753 | 259 | 17 | 1 | 687 | 1 | 735 | 0.0 | 619 |
| MS.gene055186.t1 | AT1G14640 | 54.449 | 753 | 259 | 17 | 1 | 687 | 1 | 735 | 0.0 | 619 |
| MS.gene055186.t1 | AT5G12280 | 48.966 | 145 | 53 | 3 | 571 | 715 | 294 | 417 | 2.11e-30 | 125 |
| MS.gene055186.t1 | AT5G12280 | 30.220 | 182 | 91 | 4 | 44 | 224 | 89 | 235 | 9.92e-12 | 68.2 |
| MS.gene055186.t1 | AT4G16200 | 32.841 | 271 | 106 | 7 | 37 | 236 | 10 | 275 | 3.25e-30 | 121 |
| MS.gene055186.t1 | AT5G06520 | 33.333 | 252 | 119 | 9 | 38 | 285 | 391 | 597 | 3.56e-28 | 121 |
| MS.gene055186.t1 | AT5G06520 | 36.029 | 136 | 67 | 4 | 153 | 286 | 79 | 196 | 8.26e-13 | 72.4 |
| MS.gene055186.t1 | AT5G06890 | 57.333 | 75 | 20 | 3 | 642 | 715 | 2 | 65 | 2.10e-16 | 74.7 |
| MS.gene055186.t1 | AT2G43960 | 26.744 | 258 | 155 | 8 | 44 | 292 | 9 | 241 | 1.70e-13 | 73.9 |
| MS.gene055186.t1 | AT3G49130 | 37.410 | 139 | 68 | 4 | 140 | 277 | 39 | 159 | 6.31e-13 | 70.9 |
Find 219 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTGGTTTCTCGAATTT+TGG | 0.125226 | 7.4:+40264716 | None:intergenic |
| CTCTTTGGTTCTGGTTCCTT+TGG | 0.222575 | 7.4:+40264091 | None:intergenic |
| GATCCATGAGGATAAATTTC+TGG | 0.232498 | 7.4:-40264044 | MS.gene055186:CDS |
| TACTTCATCCTCTTTGGTTC+TGG | 0.251478 | 7.4:+40264082 | None:intergenic |
| GGGAATGAGAGATGCTAGTT+TGG | 0.254518 | 7.4:-40264976 | MS.gene055186:CDS |
| CAGCATCATCTTCTTCTATA+GGG | 0.266634 | 7.4:+40265057 | None:intergenic |
| ACTGTATACTGCTCAGCTTC+TGG | 0.278913 | 7.4:+40265551 | None:intergenic |
| TCATCATACTTCATCCTCTT+TGG | 0.287652 | 7.4:+40264076 | None:intergenic |
| TTGGTTTCATGAAATGAAAT+TGG | 0.291074 | 7.4:+40265408 | None:intergenic |
| GGATCAAGTACTTTCCTTAC+TGG | 0.302859 | 7.4:+40265575 | None:intergenic |
| ACTTGTCAATCCTGTCAAAA+AGG | 0.309455 | 7.4:+40265448 | None:intergenic |
| CTGAGACGCTTTATCGATAA+TGG | 0.312615 | 7.4:+40265832 | None:intergenic |
| TCAGCATCATCTTCTTCTAT+AGG | 0.318980 | 7.4:+40265056 | None:intergenic |
| CTCAATTTCTGCTTGTTAGC+AGG | 0.319229 | 7.4:+40263872 | None:intergenic |
| CACAATTTGTGGCTCGTAAT+GGG | 0.323408 | 7.4:-40265475 | MS.gene055186:CDS |
| TGGTTTCATGAAATGAAATT+GGG | 0.327351 | 7.4:+40265409 | None:intergenic |
| ATTGGAAGGCCAATGCTATT+AGG | 0.334626 | 7.4:+40264322 | None:intergenic |
| AGCTTCTCTGTCAACCCCTT+TGG | 0.339349 | 7.4:+40265323 | None:intergenic |
| CAAGCAATGTCACAAAATAT+TGG | 0.348373 | 7.4:-40264511 | MS.gene055186:CDS |
| ACCTCACACACTAGAACTAT+TGG | 0.352920 | 7.4:-40265884 | MS.gene055186:CDS |
| TTAAACCGGGCAGAAATATC+AGG | 0.353449 | 7.4:+40265599 | None:intergenic |
| AGATTTCCTTCATCAACATT+AGG | 0.356214 | 7.4:+40263983 | None:intergenic |
| GATGGGAGAAACCGCAAAAT+TGG | 0.357100 | 7.4:+40264833 | None:intergenic |
| TAAATTTCTGGCTCAGCATC+AGG | 0.363323 | 7.4:-40264032 | MS.gene055186:CDS |
| GCTTCCTCAGGAGGTGGCGG+TGG | 0.365030 | 7.4:+40264127 | None:intergenic |
| AAGGGAATAAGAGTGAAGTT+AGG | 0.372148 | 7.4:-40264941 | MS.gene055186:CDS |
| GTGCTGATTATATGCATGAT+AGG | 0.379389 | 7.4:+40265718 | None:intergenic |
| GAGGAATTGATGGATGCATT+GGG | 0.385343 | 7.4:+40264251 | None:intergenic |
| AAATCTCAAAGGACAAGTTC+TGG | 0.387127 | 7.4:-40263966 | MS.gene055186:CDS |
| TCATTCCCTCTTCAACAAGC+TGG | 0.390495 | 7.4:+40264991 | None:intergenic |
| TCGATAATGGTTCTAATGTC+TGG | 0.393863 | 7.4:+40265845 | None:intergenic |
| CAGTTCTTCACAATCCTAAT+CGG | 0.396930 | 7.4:+40264897 | None:intergenic |
| CTTTCCTTACTGGTTTAAAC+CGG | 0.399511 | 7.4:+40265585 | None:intergenic |
| TCAACAACCTGGGGCTGCAC+TGG | 0.414407 | 7.4:-40265657 | MS.gene055186:CDS |
| CGATTAGGATTGTGAAGAAC+TGG | 0.415914 | 7.4:-40264896 | MS.gene055186:CDS |
| AAAGCTTACAACACAATTTG+TGG | 0.416193 | 7.4:-40265486 | MS.gene055186:CDS |
| TCTGCAGGAAGCCTGTCTTC+TGG | 0.418705 | 7.4:+40264867 | None:intergenic |
| TGTGCATGCCTGGTCTTGGT+GGG | 0.420984 | 7.4:+40264296 | None:intergenic |
| TCCTCCCTTGTAATACCTTC+AGG | 0.423377 | 7.4:+40265521 | None:intergenic |
| ATGTGCATGCCTGGTCTTGG+TGG | 0.427467 | 7.4:+40264295 | None:intergenic |
| ATCACCTCCTCAAGGGTCAT+TGG | 0.428965 | 7.4:+40265098 | None:intergenic |
| ACTCCTTGAGGCGGAGGTGG+TGG | 0.429322 | 7.4:+40264154 | None:intergenic |
| TTCTCTGTCAACCCCTTTGG+AGG | 0.429998 | 7.4:+40265326 | None:intergenic |
| GGTCTTGGAGGAGGTGCAGC+TGG | 0.430475 | 7.4:+40264436 | None:intergenic |
| CTTGCACATTACAATGTTAG+TGG | 0.432552 | 7.4:-40263815 | MS.gene055186:CDS |
| CCTCCCACTGATCGAAATCT+TGG | 0.434890 | 7.4:-40265944 | MS.gene055186:CDS |
| CCAGGTGGTGGAGGAATTGA+TGG | 0.435716 | 7.4:+40264241 | None:intergenic |
| AGTCCAGGTGGTAGCGGAAG+AGG | 0.436647 | 7.4:+40264394 | None:intergenic |
| ATCATGTGCATGCCTGGTCT+TGG | 0.437697 | 7.4:+40264292 | None:intergenic |
| TGCATGCCTGGTCTTGGTGG+GGG | 0.438941 | 7.4:+40264298 | None:intergenic |
| TCGAATCAGTTCACCGGTGA+TGG | 0.439397 | 7.4:+40264815 | None:intergenic |
| CTTCCTCAGGAGGTGGCGGT+GGG | 0.441197 | 7.4:+40264128 | None:intergenic |
| GCTCACCCTCATCCACCATC+AGG | 0.441412 | 7.4:-40264196 | MS.gene055186:CDS |
| ACACAATTTGTGGCTCGTAA+TGG | 0.446772 | 7.4:-40265476 | MS.gene055186:CDS |
| AAAACATTGTTGGACTTGCT+CGG | 0.455205 | 7.4:-40264671 | MS.gene055186:CDS |
| GATACTCCTTGAGGCGGAGG+TGG | 0.455624 | 7.4:+40264151 | None:intergenic |
| AGGTATTACAAGGGAGGAGC+TGG | 0.455882 | 7.4:-40265516 | MS.gene055186:CDS |
| GCTAGGGAAGGAAGTAGAAA+TGG | 0.459230 | 7.4:-40265033 | MS.gene055186:CDS |
| AATTTCAGCCTTAACAGCAT+TGG | 0.464541 | 7.4:+40264609 | None:intergenic |
| TGACCCTTGAGGAGGTGATA+AGG | 0.466381 | 7.4:-40265094 | MS.gene055186:CDS |
| GAAGGAAGTAGAAATGGAAA+TGG | 0.467583 | 7.4:-40265027 | MS.gene055186:CDS |
| GTGTGTGAGGTAACAGTTAT+CGG | 0.468066 | 7.4:+40265896 | None:intergenic |
| AGGGAATAAGAGTGAAGTTA+GGG | 0.469948 | 7.4:-40264940 | MS.gene055186:CDS |
| TGGATTGAGGAAATTAAACT+TGG | 0.471770 | 7.4:+40265748 | None:intergenic |
| AATGTAAACATGCTATGAGT+TGG | 0.473616 | 7.4:+40265389 | None:intergenic |
| TCAATTTCTGCTTGTTAGCA+GGG | 0.474049 | 7.4:+40263873 | None:intergenic |
| GGGGATACTCCTTGAGGCGG+AGG | 0.475436 | 7.4:+40264148 | None:intergenic |
| ATGTGTGAATAGGCTGGAAT+GGG | 0.475469 | 7.4:-40265264 | MS.gene055186:CDS |
| CATTCCCTCTTCAACAAGCT+GGG | 0.478566 | 7.4:+40264992 | None:intergenic |
| GGAGGAATTGATGGATGCAT+TGG | 0.478614 | 7.4:+40264250 | None:intergenic |
| GATGTGTGAATAGGCTGGAA+TGG | 0.480996 | 7.4:-40265265 | MS.gene055186:CDS |
| GGAGCTTCCTCAGGAGGTGG+CGG | 0.481607 | 7.4:+40264124 | None:intergenic |
| CAATCTTCTACTCAACAACC+TGG | 0.481694 | 7.4:-40265668 | MS.gene055186:CDS |
| GAAGAAGATGATGCTGAGCT+AGG | 0.486919 | 7.4:-40265050 | MS.gene055186:CDS |
| CTGCCCGGTTTAAACCAGTA+AGG | 0.487537 | 7.4:-40265589 | MS.gene055186:CDS |
| GATTGCATCATGTGCATGCC+TGG | 0.488108 | 7.4:+40264286 | None:intergenic |
| AGGATTATTGCTAATTATGC+GGG | 0.488493 | 7.4:-40265776 | MS.gene055186:CDS |
| AACTGAGATCCAGGTGGTGG+AGG | 0.493314 | 7.4:+40264232 | None:intergenic |
| AACACCGTGAACCACCGATT+AGG | 0.494010 | 7.4:-40264911 | MS.gene055186:CDS |
| AGCGAGGGAGGAGCTTCCTC+AGG | 0.496092 | 7.4:+40264115 | None:intergenic |
| TTCTCCTTATCACCTCCTCA+AGG | 0.496247 | 7.4:+40265090 | None:intergenic |
| CCTTGCTGATGCATATTCAA+AGG | 0.496930 | 7.4:-40265357 | MS.gene055186:CDS |
| TTTCGATCAGTGGGAGGAGC+GGG | 0.498622 | 7.4:+40265950 | None:intergenic |
| GGACGAACTGAAGGCATACC+AGG | 0.501660 | 7.4:+40264415 | None:intergenic |
| TTGGTTGAATCTCTATCTGC+AGG | 0.504250 | 7.4:+40264852 | None:intergenic |
| CCATCAATTCCTCCACCACC+TGG | 0.504486 | 7.4:-40264241 | MS.gene055186:CDS |
| ATATTGTCCTTGAGAAAGCC+TGG | 0.508540 | 7.4:+40263842 | None:intergenic |
| TAAGGAATTCTCATCATGCT+AGG | 0.509471 | 7.4:-40265995 | None:intergenic |
| AAGCTGAGCAGTATACAGTT+AGG | 0.509662 | 7.4:-40265547 | MS.gene055186:CDS |
| GTGCATGCCTGGTCTTGGTG+GGG | 0.510444 | 7.4:+40264297 | None:intergenic |
| TTCTGGTTCCTTTGGAAGCG+AGG | 0.510904 | 7.4:+40264099 | None:intergenic |
| AATGGAAATGGACGAGGAAG+AGG | 0.514865 | 7.4:-40265015 | MS.gene055186:CDS |
| GGATGAGGGTGAGCAACATA+AGG | 0.516615 | 7.4:+40264205 | None:intergenic |
| ATGGTCTTGAATTCGAAAAG+AGG | 0.517310 | 7.4:-40265796 | MS.gene055186:CDS |
| TCAGTGGGAGGAGCGGGTAA+AGG | 0.517550 | 7.4:+40265956 | None:intergenic |
| TGCGAATTTCTCTCATTGAT+CGG | 0.519056 | 7.4:-40264770 | MS.gene055186:CDS |
| CAGAAATTGAGTGGAAAGCC+AGG | 0.519574 | 7.4:-40263860 | MS.gene055186:CDS |
| TCTGTTCCTAATGTTGATGA+AGG | 0.520094 | 7.4:-40263989 | MS.gene055186:CDS |
| GGAGCGGGTAAAGGAAGTAT+AGG | 0.521350 | 7.4:+40265965 | None:intergenic |
| AGAGGCCCAGCTTGTTGAAG+AGG | 0.521543 | 7.4:-40264997 | MS.gene055186:CDS |
| CGTCCTCTTCCGCTACCACC+TGG | 0.524024 | 7.4:-40264397 | MS.gene055186:CDS |
| TTCACACATCTTTCAAGCAC+GGG | 0.524474 | 7.4:+40265278 | None:intergenic |
| GGAGGAGCTTCCTCAGGAGG+TGG | 0.524586 | 7.4:+40264121 | None:intergenic |
| TAAGGAGTGAACTGAGATCC+AGG | 0.526111 | 7.4:+40264223 | None:intergenic |
| AGGAATTGATGGATGCATTG+GGG | 0.531424 | 7.4:+40264252 | None:intergenic |
| GGCGTTCACAAGAGCAAGCT+AGG | 0.533847 | 7.4:-40265241 | MS.gene055186:CDS |
| ATCATCCCTGATGGTGGATG+AGG | 0.533964 | 7.4:+40264190 | None:intergenic |
| GAAGGCATACCAGGTCTTGG+AGG | 0.534350 | 7.4:+40264424 | None:intergenic |
| TTTGCGGTTTCTCCCATCAC+CGG | 0.535322 | 7.4:-40264828 | MS.gene055186:CDS |
| AGTACAAAGAACAGAAAGAA+AGG | 0.535684 | 7.4:-40264746 | MS.gene055186:CDS |
| ACTGAAGGCATACCAGGTCT+TGG | 0.536230 | 7.4:+40264421 | None:intergenic |
| GGCTTCCTGAAGGTATTACA+AGG | 0.536300 | 7.4:-40265526 | MS.gene055186:CDS |
| TCAGTTTCCAGTGCAGCCCC+AGG | 0.537130 | 7.4:+40265650 | None:intergenic |
| GGTTTCATGAAATGAAATTG+GGG | 0.538125 | 7.4:+40265410 | None:intergenic |
| ACAAGAGCAAGCTAGGCAAA+AGG | 0.539404 | 7.4:-40265234 | MS.gene055186:CDS |
| ACCTCCTCAAGGGTCATTGG+AGG | 0.542212 | 7.4:+40265101 | None:intergenic |
| AGCATCATCTTCTTCTATAG+GGG | 0.542453 | 7.4:+40265058 | None:intergenic |
| TATGCATGATAGGGATCAGA+TGG | 0.545106 | 7.4:+40265728 | None:intergenic |
| TGCACATGATGCAATCTCTC+CGG | 0.546274 | 7.4:-40264279 | MS.gene055186:CDS |
| GATAGGGATCAGATGGATTG+AGG | 0.547989 | 7.4:+40265735 | None:intergenic |
| CACCACGCTCTCTCAAGGCT+AGG | 0.548324 | 7.4:+40263777 | None:intergenic |
| AGTTTGGAAGACAATGATGA+AGG | 0.550080 | 7.4:-40264960 | MS.gene055186:CDS |
| CGAATCAGTTCACCGGTGAT+GGG | 0.550218 | 7.4:+40264816 | None:intergenic |
| CAATCTTTGTCTGAAACTGT+TGG | 0.550457 | 7.4:-40263932 | MS.gene055186:CDS |
| TTTGACAGGATTGACAAGTA+GGG | 0.551971 | 7.4:-40265444 | MS.gene055186:CDS |
| GTGAACTGAGATCCAGGTGG+TGG | 0.552277 | 7.4:+40264229 | None:intergenic |
| AGCTCCTCCCTCGCTTCCAA+AGG | 0.552670 | 7.4:-40264107 | MS.gene055186:CDS |
| GAGCCAGAAATTTATCCTCA+TGG | 0.553389 | 7.4:+40264041 | None:intergenic |
| GATGGTCACAGCGGTAGTAT+TGG | 0.553821 | 7.4:-40264547 | MS.gene055186:intron |
| TCTGGTTCCTTTGGAAGCGA+GGG | 0.554206 | 7.4:+40264100 | None:intergenic |
| TATTCTAATCCTAATAGCAT+TGG | 0.556841 | 7.4:-40264331 | MS.gene055186:CDS |
| GTCACAAAATATTGGAAGTG+AGG | 0.557834 | 7.4:-40264503 | MS.gene055186:CDS |
| AAGAAGATGATGCTGAGCTA+GGG | 0.558865 | 7.4:-40265049 | MS.gene055186:CDS |
| TATCGGTGCTGCTTCCTCGA+TGG | 0.559008 | 7.4:+40265913 | None:intergenic |
| AAAGATAGTCCAGGTGGTAG+CGG | 0.559926 | 7.4:+40264388 | None:intergenic |
| ACTGGAAGAGACCAGAAGAC+AGG | 0.560860 | 7.4:-40264878 | MS.gene055186:CDS |
| GGCATACCAGGTCTTGGAGG+AGG | 0.561127 | 7.4:+40264427 | None:intergenic |
| TCGAGAAACCACATTGGCAC+AGG | 0.562925 | 7.4:-40264709 | MS.gene055186:CDS |
| GAAACTGATAGTAACGATGT+AGG | 0.565425 | 7.4:-40265635 | MS.gene055186:CDS |
| GGAATTGATGGATGCATTGG+GGG | 0.566343 | 7.4:+40264253 | None:intergenic |
| GGTTCCTTTGGAAGCGAGGG+AGG | 0.567077 | 7.4:+40264103 | None:intergenic |
| CAATCCTAATCGGTGGTTCA+CGG | 0.567153 | 7.4:+40264907 | None:intergenic |
| TGAAAGATGTGTGAATAGGC+TGG | 0.567577 | 7.4:-40265270 | MS.gene055186:CDS |
| TCTCCTTATCACCTCCTCAA+GGG | 0.568936 | 7.4:+40265091 | None:intergenic |
| TCTACCACCACGCTCTCTCA+AGG | 0.569307 | 7.4:+40263772 | None:intergenic |
| TCCAATAGTTCTAGTGTGTG+AGG | 0.573333 | 7.4:+40265883 | None:intergenic |
| ATGGTTCTAATGTCTGGAGG+GGG | 0.574125 | 7.4:+40265851 | None:intergenic |
| GAGGATTATTGCTAATTATG+CGG | 0.574782 | 7.4:-40265777 | MS.gene055186:CDS |
| GAGGGAGGAGCTTCCTCAGG+AGG | 0.575398 | 7.4:+40264118 | None:intergenic |
| GGACCAAGATTTCGATCAGT+GGG | 0.576987 | 7.4:+40265941 | None:intergenic |
| ACAGATATACTGATGCGAGC+AGG | 0.578610 | 7.4:+40264007 | None:intergenic |
| ATCCCCACCGCCACCTCCTG+AGG | 0.579478 | 7.4:-40264131 | MS.gene055186:CDS |
| TTCCTCAGGAGGTGGCGGTG+GGG | 0.580148 | 7.4:+40264129 | None:intergenic |
| CATCCACCACCTCCGCCTCA+AGG | 0.581195 | 7.4:-40264157 | MS.gene055186:CDS |
| AGTAGAAATGGAAATGGACG+AGG | 0.582780 | 7.4:-40265021 | MS.gene055186:CDS |
| TGCTTGAAAGATGTGTGAAT+AGG | 0.583530 | 7.4:-40265274 | MS.gene055186:CDS |
| GTTTGGAAGACAATGATGAA+GGG | 0.585538 | 7.4:-40264959 | MS.gene055186:CDS |
| AGGACCAAGATTTCGATCAG+TGG | 0.588527 | 7.4:+40265940 | None:intergenic |
| ATTCACACATCTTTCAAGCA+CGG | 0.589297 | 7.4:+40265277 | None:intergenic |
| GGATTGAGGAAATTAAACTT+GGG | 0.589490 | 7.4:+40265749 | None:intergenic |
| AGCGGAAGAGGACGAACTGA+AGG | 0.591416 | 7.4:+40264406 | None:intergenic |
| ACCACGCTCTCTCAAGGCTA+GGG | 0.592917 | 7.4:+40263778 | None:intergenic |
| GAGGCCCAGCTTGTTGAAGA+GGG | 0.593577 | 7.4:-40264996 | MS.gene055186:CDS |
| CAGCATTGGAACCTCTTCCT+CGG | 0.595200 | 7.4:+40264623 | None:intergenic |
| TGCTGATTATATGCATGATA+GGG | 0.597204 | 7.4:+40265719 | None:intergenic |
| GCTGCTTCCTCGATGGAGAG+AGG | 0.597908 | 7.4:+40265920 | None:intergenic |
| TAGTAACGATGTAGGAACTA+CGG | 0.600138 | 7.4:-40265627 | MS.gene055186:CDS |
| AATCTTCTACTCAACAACCT+GGG | 0.604537 | 7.4:-40265667 | MS.gene055186:CDS |
| GAATACTGCATGTTATGCAT+AGG | 0.605357 | 7.4:+40264349 | None:intergenic |
| TGAAACTGTTGGCAGCCTGA+AGG | 0.606065 | 7.4:-40263921 | MS.gene055186:CDS |
| CTCACCCTCATCCACCATCA+GGG | 0.607170 | 7.4:-40264195 | MS.gene055186:CDS |
| TTCTTCACAATCCTAATCGG+TGG | 0.607876 | 7.4:+40264900 | None:intergenic |
| GTTGATGAAGGAAATCTCAA+AGG | 0.607889 | 7.4:-40263977 | MS.gene055186:CDS |
| GAGGAGGTGCAGCTGGACCG+AGG | 0.610847 | 7.4:+40264443 | None:intergenic |
| TGGAAAGCCAGGCTTTCTCA+AGG | 0.611679 | 7.4:-40263849 | MS.gene055186:CDS |
| TAATGGTTCTAATGTCTGGA+GGG | 0.613198 | 7.4:+40265849 | None:intergenic |
| ATAAGCATCATCCCTGATGG+TGG | 0.613914 | 7.4:+40264184 | None:intergenic |
| ATTTCGATCAGTGGGAGGAG+CGG | 0.614809 | 7.4:+40265949 | None:intergenic |
| ATCATAAGCATCATCCCTGA+TGG | 0.614902 | 7.4:+40264181 | None:intergenic |
| TTCATCATCCTGTGCCAATG+TGG | 0.615827 | 7.4:+40264701 | None:intergenic |
| TCCCTAGCCTTGAGAGAGCG+TGG | 0.616920 | 7.4:-40263779 | MS.gene055186:CDS |
| GGTAGATTCAAAGATAGTCC+AGG | 0.617177 | 7.4:+40264379 | None:intergenic |
| GCTAACAAGCAGAAATTGAG+TGG | 0.618988 | 7.4:-40263869 | MS.gene055186:CDS |
| AAAAGCCTGATATTTCTGCC+CGG | 0.620912 | 7.4:-40265604 | MS.gene055186:CDS |
| CAAAGGAACCAGAACCAAAG+AGG | 0.621379 | 7.4:-40264090 | MS.gene055186:CDS |
| GCTGCACCTCCTCCAAGACC+TGG | 0.621506 | 7.4:-40264433 | MS.gene055186:CDS |
| GTTTCATGAAATGAAATTGG+GGG | 0.624393 | 7.4:+40265411 | None:intergenic |
| AATGGTTCTAATGTCTGGAG+GGG | 0.624614 | 7.4:+40265850 | None:intergenic |
| AGATGATGCTGAGCTAGGGA+AGG | 0.625713 | 7.4:-40265045 | MS.gene055186:CDS |
| TCCTCCAATGACCCTTGAGG+AGG | 0.630248 | 7.4:-40265102 | MS.gene055186:CDS |
| ATCTTCTACTCAACAACCTG+GGG | 0.632988 | 7.4:-40265666 | MS.gene055186:CDS |
| TCCTGAAGGTATTACAAGGG+AGG | 0.633171 | 7.4:-40265522 | MS.gene055186:CDS |
| ACTAATTCGAATCAGTTCAC+CGG | 0.634021 | 7.4:+40264809 | None:intergenic |
| AAATTTCTGGCTCAGCATCA+GGG | 0.634384 | 7.4:-40264031 | MS.gene055186:CDS |
| CCTTTGAATATGCATCAGCA+AGG | 0.634998 | 7.4:+40265357 | None:intergenic |
| GCACATTACAATGTTAGTGG+AGG | 0.635245 | 7.4:-40263812 | MS.gene055186:CDS |
| CTTTGAATATGCATCAGCAA+GGG | 0.636298 | 7.4:+40265358 | None:intergenic |
| ATAATGGTTCTAATGTCTGG+AGG | 0.636775 | 7.4:+40265848 | None:intergenic |
| GGCGGTGGGGATACTCCTTG+AGG | 0.643477 | 7.4:+40264142 | None:intergenic |
| TTTCCTTACTGGTTTAAACC+GGG | 0.644189 | 7.4:+40265586 | None:intergenic |
| GTATACTGCTCAGCTTCTGG+AGG | 0.649302 | 7.4:+40265554 | None:intergenic |
| GGTGGGGATACTCCTTGAGG+CGG | 0.652325 | 7.4:+40264145 | None:intergenic |
| TGGTTCTAATGTCTGGAGGG+GGG | 0.655443 | 7.4:+40265852 | None:intergenic |
| CCAAGATTTCGATCAGTGGG+AGG | 0.656947 | 7.4:+40265944 | None:intergenic |
| TATACAGTTAGGCTTCCTGA+AGG | 0.661500 | 7.4:-40265536 | MS.gene055186:CDS |
| TCATCCCTGATGGTGGATGA+GGG | 0.667117 | 7.4:+40264191 | None:intergenic |
| ACATCCTCCAATGACCCTTG+AGG | 0.671282 | 7.4:-40265105 | MS.gene055186:CDS |
| CAAAATTCGAGAAACCACAT+TGG | 0.672286 | 7.4:-40264715 | MS.gene055186:CDS |
| TGTGTGAATAGGCTGGAATG+GGG | 0.675824 | 7.4:-40265263 | MS.gene055186:CDS |
| AGATTCAAAGATAGTCCAGG+TGG | 0.676207 | 7.4:+40264382 | None:intergenic |
| GCTTCCTGAAGGTATTACAA+GGG | 0.678634 | 7.4:-40265525 | MS.gene055186:CDS |
| CTAGCCTTGAGAGAGCGTGG+TGG | 0.691451 | 7.4:-40263776 | MS.gene055186:CDS |
| GAGGTGCAGCTGGACCGAGG+AGG | 0.692623 | 7.4:+40264446 | None:intergenic |
| TCTTGGTCCTCTCTCCATCG+AGG | 0.699779 | 7.4:-40265927 | MS.gene055186:CDS |
| TGATTCTGCTCTGATCCATG+AGG | 0.703630 | 7.4:-40264056 | MS.gene055186:CDS |
| GTGTGAATAGGCTGGAATGG+GGG | 0.708042 | 7.4:-40265262 | MS.gene055186:CDS |
| CTATCTTTGAATCTACCTCG+TGG | 0.718321 | 7.4:-40264373 | MS.gene055186:CDS |
| ATGTTATGCATAGGACCACG+AGG | 0.777679 | 7.4:+40264358 | None:intergenic |
| GGAGTGAACTGAGATCCAGG+TGG | 0.832532 | 7.4:+40264226 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAGCTATGATTGAT+TGG | - | chr7.4:40264559-40264578 | MS.gene055186:intron | 20.0% |
| ! | GAAATCTCAAAAAACATTGT+TGG | - | chr7.4:40265062-40265081 | MS.gene055186:CDS | 25.0% |
| ! | TATTCTAATCCTAATAGCAT+TGG | - | chr7.4:40265412-40265431 | MS.gene055186:CDS | 25.0% |
| ! | TGGTTTCATGAAATGAAATT+GGG | + | chr7.4:40264337-40264356 | None:intergenic | 25.0% |
| ! | TTGGTTTCATGAAATGAAAT+TGG | + | chr7.4:40264338-40264357 | None:intergenic | 25.0% |
| AAAGCTTACAACACAATTTG+TGG | - | chr7.4:40264257-40264276 | MS.gene055186:CDS | 30.0% | |
| AATGAATCTAAAAACCTCCT+CGG | - | chr7.4:40265283-40265302 | MS.gene055186:CDS | 30.0% | |
| AATGTAAACATGCTATGAGT+TGG | + | chr7.4:40264357-40264376 | None:intergenic | 30.0% | |
| AGATTTCCTTCATCAACATT+AGG | + | chr7.4:40265763-40265782 | None:intergenic | 30.0% | |
| AGGATTATTGCTAATTATGC+GGG | - | chr7.4:40263967-40263986 | MS.gene055186:CDS | 30.0% | |
| AGTACAAAGAACAGAAAGAA+AGG | - | chr7.4:40264997-40265016 | MS.gene055186:CDS | 30.0% | |
| CAAGCAATGTCACAAAATAT+TGG | - | chr7.4:40265232-40265251 | MS.gene055186:CDS | 30.0% | |
| GAGGATTATTGCTAATTATG+CGG | - | chr7.4:40263966-40263985 | MS.gene055186:CDS | 30.0% | |
| GGATTGAGGAAATTAAACTT+GGG | + | chr7.4:40263997-40264016 | None:intergenic | 30.0% | |
| GGTTTCATGAAATGAAATTG+GGG | + | chr7.4:40264336-40264355 | None:intergenic | 30.0% | |
| GTTTCATGAAATGAAATTGG+GGG | + | chr7.4:40264335-40264354 | None:intergenic | 30.0% | |
| TCGGTAGTATCAAAAATATC+AGG | + | chr7.4:40265104-40265123 | None:intergenic | 30.0% | |
| TGGATTGAGGAAATTAAACT+TGG | + | chr7.4:40263998-40264017 | None:intergenic | 30.0% | |
| ! | CAATATTTTGTGACATTGCT+TGG | + | chr7.4:40265234-40265253 | None:intergenic | 30.0% |
| ! | TAGAGATTCAACCAATTTTG+CGG | - | chr7.4:40264899-40264918 | MS.gene055186:CDS | 30.0% |
| ! | TGCTGATTATATGCATGATA+GGG | + | chr7.4:40264027-40264046 | None:intergenic | 30.0% |
| !! | AATAGATTTTGCTGATGATG+AGG | - | chr7.4:40264605-40264624 | MS.gene055186:intron | 30.0% |
| !! | TGATATTTTTGATACTACCG+AGG | - | chr7.4:40265103-40265122 | MS.gene055186:CDS | 30.0% |
| AAATCTCAAAGGACAAGTTC+TGG | - | chr7.4:40265777-40265796 | MS.gene055186:CDS | 35.0% | |
| AACAACCTAAGCTGGTTATA+TGG | - | chr7.4:40265173-40265192 | MS.gene055186:CDS | 35.0% | |
| AAGGGAATAAGAGTGAAGTT+AGG | - | chr7.4:40264802-40264821 | MS.gene055186:CDS | 35.0% | |
| AATCTTCTACTCAACAACCT+GGG | - | chr7.4:40264076-40264095 | MS.gene055186:CDS | 35.0% | |
| AATTGATGAACAACCTAAGC+TGG | - | chr7.4:40265165-40265184 | MS.gene055186:CDS | 35.0% | |
| AATTTCAGCCTTAACAGCAT+TGG | + | chr7.4:40265137-40265156 | None:intergenic | 35.0% | |
| ACAACCTAAGCTGGTTATAT+GGG | - | chr7.4:40265174-40265193 | MS.gene055186:CDS | 35.0% | |
| ACTAATTCGAATCAGTTCAC+CGG | + | chr7.4:40264937-40264956 | None:intergenic | 35.0% | |
| ACTTGTCAATCCTGTCAAAA+AGG | + | chr7.4:40264298-40264317 | None:intergenic | 35.0% | |
| AGCATCATCTTCTTCTATAG+GGG | + | chr7.4:40264688-40264707 | None:intergenic | 35.0% | |
| AGGGAATAAGAGTGAAGTTA+GGG | - | chr7.4:40264803-40264822 | MS.gene055186:CDS | 35.0% | |
| AGTTTGGAAGACAATGATGA+AGG | - | chr7.4:40264783-40264802 | MS.gene055186:CDS | 35.0% | |
| ATTCACACATCTTTCAAGCA+CGG | + | chr7.4:40264469-40264488 | None:intergenic | 35.0% | |
| CAAAATTCGAGAAACCACAT+TGG | - | chr7.4:40265028-40265047 | MS.gene055186:CDS | 35.0% | |
| CAGCATCATCTTCTTCTATA+GGG | + | chr7.4:40264689-40264708 | None:intergenic | 35.0% | |
| CAGTTCTTCACAATCCTAAT+CGG | + | chr7.4:40264849-40264868 | None:intergenic | 35.0% | |
| CTTGCACATTACAATGTTAG+TGG | - | chr7.4:40265928-40265947 | MS.gene055186:CDS | 35.0% | |
| CTTTGAATATGCATCAGCAA+GGG | + | chr7.4:40264388-40264407 | None:intergenic | 35.0% | |
| GAAACTGATAGTAACGATGT+AGG | - | chr7.4:40264108-40264127 | MS.gene055186:CDS | 35.0% | |
| GAAGGAAGTAGAAATGGAAA+TGG | - | chr7.4:40264716-40264735 | MS.gene055186:CDS | 35.0% | |
| GAATACTGCATGTTATGCAT+AGG | + | chr7.4:40265397-40265416 | None:intergenic | 35.0% | |
| GATCCATGAGGATAAATTTC+TGG | - | chr7.4:40265699-40265718 | MS.gene055186:CDS | 35.0% | |
| GTCACAAAATATTGGAAGTG+AGG | - | chr7.4:40265240-40265259 | MS.gene055186:CDS | 35.0% | |
| GTTTGGAAGACAATGATGAA+GGG | - | chr7.4:40264784-40264803 | MS.gene055186:CDS | 35.0% | |
| TAGTAACGATGTAGGAACTA+CGG | - | chr7.4:40264116-40264135 | MS.gene055186:CDS | 35.0% | |
| TCAGCATCATCTTCTTCTAT+AGG | + | chr7.4:40264690-40264709 | None:intergenic | 35.0% | |
| TCATCATACTTCATCCTCTT+TGG | + | chr7.4:40265670-40265689 | None:intergenic | 35.0% | |
| TCTCAGTTCGTTGCTAAAAA+TGG | - | chr7.4:40263928-40263947 | MS.gene055186:CDS | 35.0% | |
| TGCGAATTTCTCTCATTGAT+CGG | - | chr7.4:40264973-40264992 | MS.gene055186:CDS | 35.0% | |
| TGCTTGAAAGATGTGTGAAT+AGG | - | chr7.4:40264469-40264488 | MS.gene055186:CDS | 35.0% | |
| TTTGACAGGATTGACAAGTA+GGG | - | chr7.4:40264299-40264318 | MS.gene055186:CDS | 35.0% | |
| ! | AAAACATTGTTGGACTTGCT+CGG | - | chr7.4:40265072-40265091 | MS.gene055186:CDS | 35.0% |
| ! | AATGGGAAATCCTTTTTGAC+AGG | - | chr7.4:40264285-40264304 | MS.gene055186:CDS | 35.0% |
| ! | ATGGTCTTGAATTCGAAAAG+AGG | - | chr7.4:40263947-40263966 | MS.gene055186:CDS | 35.0% |
| ! | CAATCTTTGTCTGAAACTGT+TGG | - | chr7.4:40265811-40265830 | MS.gene055186:CDS | 35.0% |
| ! | CAATGTGGTTTCTCGAATTT+TGG | + | chr7.4:40265030-40265049 | None:intergenic | 35.0% |
| ! | GATTGATTGGCATGATTTTG+TGG | - | chr7.4:40264572-40264591 | MS.gene055186:intron | 35.0% |
| ! | GTTGATGAAGGAAATCTCAA+AGG | - | chr7.4:40265766-40265785 | MS.gene055186:CDS | 35.0% |
| ! | TCAATTTCTGCTTGTTAGCA+GGG | + | chr7.4:40265873-40265892 | None:intergenic | 35.0% |
| ! | TCTGTTCCTAATGTTGATGA+AGG | - | chr7.4:40265754-40265773 | MS.gene055186:CDS | 35.0% |
| ! | TTTTGACAGGATTGACAAGT+AGG | - | chr7.4:40264298-40264317 | MS.gene055186:CDS | 35.0% |
| !! | ATAATGGTTCTAATGTCTGG+AGG | + | chr7.4:40263898-40263917 | None:intergenic | 35.0% |
| !! | CTTTCCTTACTGGTTTAAAC+CGG | + | chr7.4:40264161-40264180 | None:intergenic | 35.0% |
| !! | GTGCTGATTATATGCATGAT+AGG | + | chr7.4:40264028-40264047 | None:intergenic | 35.0% |
| !! | TAATGGTTCTAATGTCTGGA+GGG | + | chr7.4:40263897-40263916 | None:intergenic | 35.0% |
| !! | TCGATAATGGTTCTAATGTC+TGG | + | chr7.4:40263901-40263920 | None:intergenic | 35.0% |
| !! | TTTCCTTACTGGTTTAAACC+GGG | + | chr7.4:40264160-40264179 | None:intergenic | 35.0% |
| AAGAAGATGATGCTGAGCTA+GGG | - | chr7.4:40264694-40264713 | MS.gene055186:CDS | 40.0% | |
| AAGAGGTTCCAATGCTGTTA+AGG | - | chr7.4:40265126-40265145 | MS.gene055186:CDS | 40.0% | |
| AAGCTGAGCAGTATACAGTT+AGG | - | chr7.4:40264196-40264215 | MS.gene055186:CDS | 40.0% | |
| ACACAATTTGTGGCTCGTAA+TGG | - | chr7.4:40264267-40264286 | MS.gene055186:CDS | 40.0% | |
| ACCTCACACACTAGAACTAT+TGG | - | chr7.4:40263859-40263878 | MS.gene055186:CDS | 40.0% | |
| AGATTCAAAGATAGTCCAGG+TGG | + | chr7.4:40265364-40265383 | None:intergenic | 40.0% | |
| AGCCTGAAGGAAAAAATTGC+TGG | - | chr7.4:40265835-40265854 | MS.gene055186:CDS | 40.0% | |
| AGTAGAAATGGAAATGGACG+AGG | - | chr7.4:40264722-40264741 | MS.gene055186:CDS | 40.0% | |
| ATATTGTCCTTGAGAAAGCC+TGG | + | chr7.4:40265904-40265923 | None:intergenic | 40.0% | |
| ATCATAAGCATCATCCCTGA+TGG | + | chr7.4:40265565-40265584 | None:intergenic | 40.0% | |
| ATCTTCTACTCAACAACCTG+GGG | - | chr7.4:40264077-40264096 | MS.gene055186:CDS | 40.0% | |
| ATGTGTGAATAGGCTGGAAT+GGG | - | chr7.4:40264479-40264498 | MS.gene055186:CDS | 40.0% | |
| ATTGGAAGGCCAATGCTATT+AGG | + | chr7.4:40265424-40265443 | None:intergenic | 40.0% | |
| CAATCTTCTACTCAACAACC+TGG | - | chr7.4:40264075-40264094 | MS.gene055186:CDS | 40.0% | |
| CACAATTTGTGGCTCGTAAT+GGG | - | chr7.4:40264268-40264287 | MS.gene055186:CDS | 40.0% | |
| CCTGAAGGAAAAAATTGCTG+GGG | - | chr7.4:40265837-40265856 | MS.gene055186:CDS | 40.0% | |
| CCTTGCTGATGCATATTCAA+AGG | - | chr7.4:40264386-40264405 | MS.gene055186:CDS | 40.0% | |
| CCTTTGAATATGCATCAGCA+AGG | + | chr7.4:40264389-40264408 | None:intergenic | 40.0% | |
| CGATTAGGATTGTGAAGAAC+TGG | - | chr7.4:40264847-40264866 | MS.gene055186:CDS | 40.0% | |
| CTATCTTTGAATCTACCTCG+TGG | - | chr7.4:40265370-40265389 | MS.gene055186:CDS | 40.0% | |
| CTGAGACGCTTTATCGATAA+TGG | + | chr7.4:40263914-40263933 | None:intergenic | 40.0% | |
| GAGCCAGAAATTTATCCTCA+TGG | + | chr7.4:40265705-40265724 | None:intergenic | 40.0% | |
| GCACATTACAATGTTAGTGG+AGG | - | chr7.4:40265931-40265950 | MS.gene055186:CDS | 40.0% | |
| GCCTGAAGGAAAAAATTGCT+GGG | - | chr7.4:40265836-40265855 | MS.gene055186:CDS | 40.0% | |
| GCTAACAAGCAGAAATTGAG+TGG | - | chr7.4:40265874-40265893 | MS.gene055186:CDS | 40.0% | |
| GGATCAAGTACTTTCCTTAC+TGG | + | chr7.4:40264171-40264190 | None:intergenic | 40.0% | |
| GGTAGATTCAAAGATAGTCC+AGG | + | chr7.4:40265367-40265386 | None:intergenic | 40.0% | |
| GTGTGTGAGGTAACAGTTAT+CGG | + | chr7.4:40263850-40263869 | None:intergenic | 40.0% | |
| TATACAGTTAGGCTTCCTGA+AGG | - | chr7.4:40264207-40264226 | MS.gene055186:CDS | 40.0% | |
| TATGCATGATAGGGATCAGA+TGG | + | chr7.4:40264018-40264037 | None:intergenic | 40.0% | |
| TGAAAGATGTGTGAATAGGC+TGG | - | chr7.4:40264473-40264492 | MS.gene055186:CDS | 40.0% | |
| TTAAACCGGGCAGAAATATC+AGG | + | chr7.4:40264147-40264166 | None:intergenic | 40.0% | |
| TTCACACATCTTTCAAGCAC+GGG | + | chr7.4:40264468-40264487 | None:intergenic | 40.0% | |
| TTCTTCACAATCCTAATCGG+TGG | + | chr7.4:40264846-40264865 | None:intergenic | 40.0% | |
| TTGGTTGAATCTCTATCTGC+AGG | + | chr7.4:40264894-40264913 | None:intergenic | 40.0% | |
| ! | AAAAGCCTGATATTTCTGCC+CGG | - | chr7.4:40264139-40264158 | MS.gene055186:CDS | 40.0% |
| ! | AGGAATTGATGGATGCATTG+GGG | + | chr7.4:40265494-40265513 | None:intergenic | 40.0% |
| ! | CTCAATTTCTGCTTGTTAGC+AGG | + | chr7.4:40265874-40265893 | None:intergenic | 40.0% |
| ! | GAGGAATTGATGGATGCATT+GGG | + | chr7.4:40265495-40265514 | None:intergenic | 40.0% |
| ! | TACTTCATCCTCTTTGGTTC+TGG | + | chr7.4:40265664-40265683 | None:intergenic | 40.0% |
| ! | TGATTGGCATGATTTTGTGG+TGG | - | chr7.4:40264575-40264594 | MS.gene055186:intron | 40.0% |
| ! | TTTTGATACTACCGAGGAAG+AGG | - | chr7.4:40265109-40265128 | MS.gene055186:CDS | 40.0% |
| !! | AAAGGTTTTGATGCCTCCAA+AGG | - | chr7.4:40264404-40264423 | MS.gene055186:CDS | 40.0% |
| !! | AAATTTCTGGCTCAGCATCA+GGG | - | chr7.4:40265712-40265731 | MS.gene055186:CDS | 40.0% |
| !! | AAGGTTTTGATGCCTCCAAA+GGG | - | chr7.4:40264405-40264424 | MS.gene055186:CDS | 40.0% |
| !! | AATGGTTCTAATGTCTGGAG+GGG | + | chr7.4:40263896-40263915 | None:intergenic | 40.0% |
| !! | GCTTCCTGAAGGTATTACAA+GGG | - | chr7.4:40264218-40264237 | MS.gene055186:CDS | 40.0% |
| !! | TAAATTTCTGGCTCAGCATC+AGG | - | chr7.4:40265711-40265730 | MS.gene055186:CDS | 40.0% |
| !! | TCCAATAGTTCTAGTGTGTG+AGG | + | chr7.4:40263863-40263882 | None:intergenic | 40.0% |
| AAAGATAGTCCAGGTGGTAG+CGG | + | chr7.4:40265358-40265377 | None:intergenic | 45.0% | |
| AATGGAAATGGACGAGGAAG+AGG | - | chr7.4:40264728-40264747 | MS.gene055186:CDS | 45.0% | |
| ACAAGAGCAAGCTAGGCAAA+AGG | - | chr7.4:40264509-40264528 | MS.gene055186:CDS | 45.0% | |
| ACAGATATACTGATGCGAGC+AGG | + | chr7.4:40265739-40265758 | None:intergenic | 45.0% | |
| ACTGTATACTGCTCAGCTTC+TGG | + | chr7.4:40264195-40264214 | None:intergenic | 45.0% | |
| AGGACCAAGATTTCGATCAG+TGG | + | chr7.4:40263806-40263825 | None:intergenic | 45.0% | |
| ATAAGCATCATCCCTGATGG+TGG | + | chr7.4:40265562-40265581 | None:intergenic | 45.0% | |
| ATGTTATGCATAGGACCACG+AGG | + | chr7.4:40265388-40265407 | None:intergenic | 45.0% | |
| CAAAGGAACCAGAACCAAAG+AGG | - | chr7.4:40265653-40265672 | MS.gene055186:CDS | 45.0% | |
| CAATCCTAATCGGTGGTTCA+CGG | + | chr7.4:40264839-40264858 | None:intergenic | 45.0% | |
| CAGAAATTGAGTGGAAAGCC+AGG | - | chr7.4:40265883-40265902 | MS.gene055186:CDS | 45.0% | |
| CATTCCCTCTTCAACAAGCT+GGG | + | chr7.4:40264754-40264773 | None:intergenic | 45.0% | |
| CCATCCCATATAACCAGCTT+AGG | + | chr7.4:40265181-40265200 | None:intergenic | 45.0% | |
| CCTAAGCTGGTTATATGGGA+TGG | - | chr7.4:40265178-40265197 | MS.gene055186:CDS | 45.0% | |
| GAAGAAGATGATGCTGAGCT+AGG | - | chr7.4:40264693-40264712 | MS.gene055186:CDS | 45.0% | |
| GATGGGAGAAACCGCAAAAT+TGG | + | chr7.4:40264913-40264932 | None:intergenic | 45.0% | |
| GATGTGTGAATAGGCTGGAA+TGG | - | chr7.4:40264478-40264497 | MS.gene055186:CDS | 45.0% | |
| GCTAGGGAAGGAAGTAGAAA+TGG | - | chr7.4:40264710-40264729 | MS.gene055186:CDS | 45.0% | |
| GGACCAAGATTTCGATCAGT+GGG | + | chr7.4:40263805-40263824 | None:intergenic | 45.0% | |
| GGGAATGAGAGATGCTAGTT+TGG | - | chr7.4:40264767-40264786 | MS.gene055186:CDS | 45.0% | |
| GTTATATGGGATGGTCACAG+CGG | - | chr7.4:40265187-40265206 | MS.gene055186:CDS | 45.0% | |
| TAAGGAGTGAACTGAGATCC+AGG | + | chr7.4:40265523-40265542 | None:intergenic | 45.0% | |
| TCATTCCCTCTTCAACAAGC+TGG | + | chr7.4:40264755-40264774 | None:intergenic | 45.0% | |
| TCCTCCCTTGTAATACCTTC+AGG | + | chr7.4:40264225-40264244 | None:intergenic | 45.0% | |
| TCTCCTTATCACCTCCTCAA+GGG | + | chr7.4:40264655-40264674 | None:intergenic | 45.0% | |
| TGATTCTGCTCTGATCCATG+AGG | - | chr7.4:40265687-40265706 | MS.gene055186:CDS | 45.0% | |
| TGCACATGATGCAATCTCTC+CGG | - | chr7.4:40265464-40265483 | MS.gene055186:CDS | 45.0% | |
| TGTGTGAATAGGCTGGAATG+GGG | - | chr7.4:40264480-40264499 | MS.gene055186:CDS | 45.0% | |
| TTCATCATCCTGTGCCAATG+TGG | + | chr7.4:40265045-40265064 | None:intergenic | 45.0% | |
| TTCTCCTTATCACCTCCTCA+AGG | + | chr7.4:40264656-40264675 | None:intergenic | 45.0% | |
| ! | GGAATTGATGGATGCATTGG+GGG | + | chr7.4:40265493-40265512 | None:intergenic | 45.0% |
| ! | GGAGGAATTGATGGATGCAT+TGG | + | chr7.4:40265496-40265515 | None:intergenic | 45.0% |
| !! | AGGTTTTGATGCCTCCAAAG+GGG | - | chr7.4:40264406-40264425 | MS.gene055186:CDS | 45.0% |
| !! | ATGGTTCTAATGTCTGGAGG+GGG | + | chr7.4:40263895-40263914 | None:intergenic | 45.0% |
| !! | CTCTTTGGTTCTGGTTCCTT+TGG | + | chr7.4:40265655-40265674 | None:intergenic | 45.0% |
| !! | GATAGGGATCAGATGGATTG+AGG | + | chr7.4:40264011-40264030 | None:intergenic | 45.0% |
| !! | GGCTTCCTGAAGGTATTACA+AGG | - | chr7.4:40264217-40264236 | MS.gene055186:CDS | 45.0% |
| !! | TCCTGAAGGTATTACAAGGG+AGG | - | chr7.4:40264221-40264240 | MS.gene055186:CDS | 45.0% |
| !!! | CCCCAGCAATTTTTTCCTTC+AGG | + | chr7.4:40265840-40265859 | None:intergenic | 45.0% |
| ACATCCTCCAATGACCCTTG+AGG | - | chr7.4:40264638-40264657 | MS.gene055186:CDS | 50.0% | |
| ACTGGAAGAGACCAGAAGAC+AGG | - | chr7.4:40264865-40264884 | MS.gene055186:CDS | 50.0% | |
| AGATGATGCTGAGCTAGGGA+AGG | - | chr7.4:40264698-40264717 | MS.gene055186:CDS | 50.0% | |
| AGCTTCTCTGTCAACCCCTT+TGG | + | chr7.4:40264423-40264442 | None:intergenic | 50.0% | |
| AGGTATTACAAGGGAGGAGC+TGG | - | chr7.4:40264227-40264246 | MS.gene055186:CDS | 50.0% | |
| ATCACCTCCTCAAGGGTCAT+TGG | + | chr7.4:40264648-40264667 | None:intergenic | 50.0% | |
| ATCATGTGCATGCCTGGTCT+TGG | + | chr7.4:40265454-40265473 | None:intergenic | 50.0% | |
| ATTTCGATCAGTGGGAGGAG+CGG | + | chr7.4:40263797-40263816 | None:intergenic | 50.0% | |
| CCAAGATTTCGATCAGTGGG+AGG | + | chr7.4:40263802-40263821 | None:intergenic | 50.0% | |
| CCTCCCACTGATCGAAATCT+TGG | - | chr7.4:40263799-40263818 | MS.gene055186:CDS | 50.0% | |
| CGAATCAGTTCACCGGTGAT+GGG | + | chr7.4:40264930-40264949 | None:intergenic | 50.0% | |
| CTGCCCGGTTTAAACCAGTA+AGG | - | chr7.4:40264154-40264173 | MS.gene055186:CDS | 50.0% | |
| GATGGTCACAGCGGTAGTAT+TGG | - | chr7.4:40265196-40265215 | MS.gene055186:CDS | 50.0% | |
| GATTGCATCATGTGCATGCC+TGG | + | chr7.4:40265460-40265479 | None:intergenic | 50.0% | |
| GGATGAGGGTGAGCAACATA+AGG | + | chr7.4:40265541-40265560 | None:intergenic | 50.0% | |
| GTATACTGCTCAGCTTCTGG+AGG | + | chr7.4:40264192-40264211 | None:intergenic | 50.0% | |
| GTGTGAATAGGCTGGAATGG+GGG | - | chr7.4:40264481-40264500 | MS.gene055186:CDS | 50.0% | |
| TCGAATCAGTTCACCGGTGA+TGG | + | chr7.4:40264931-40264950 | None:intergenic | 50.0% | |
| TCGAGAAACCACATTGGCAC+AGG | - | chr7.4:40265034-40265053 | MS.gene055186:CDS | 50.0% | |
| TGAAACTGTTGGCAGCCTGA+AGG | - | chr7.4:40265822-40265841 | MS.gene055186:CDS | 50.0% | |
| TGACCCTTGAGGAGGTGATA+AGG | - | chr7.4:40264649-40264668 | MS.gene055186:CDS | 50.0% | |
| TGGAAAGCCAGGCTTTCTCA+AGG | - | chr7.4:40265894-40265913 | MS.gene055186:CDS | 50.0% | |
| TTCTCTGTCAACCCCTTTGG+AGG | + | chr7.4:40264420-40264439 | None:intergenic | 50.0% | |
| TTTGCGGTTTCTCCCATCAC+CGG | - | chr7.4:40264915-40264934 | MS.gene055186:CDS | 50.0% | |
| ! | AACACCGTGAACCACCGATT+AGG | - | chr7.4:40264832-40264851 | MS.gene055186:CDS | 50.0% |
| ! | ACTGAAGGCATACCAGGTCT+TGG | + | chr7.4:40265325-40265344 | None:intergenic | 50.0% |
| ! | ATTGATGGATGCATTGGGGG+TGG | + | chr7.4:40265490-40265509 | None:intergenic | 50.0% |
| ! | CAGCATTGGAACCTCTTCCT+CGG | + | chr7.4:40265123-40265142 | None:intergenic | 50.0% |
| ! | GGAGCGGGTAAAGGAAGTAT+AGG | + | chr7.4:40263781-40263800 | None:intergenic | 50.0% |
| ! | TCTGGTTCCTTTGGAAGCGA+GGG | + | chr7.4:40265646-40265665 | None:intergenic | 50.0% |
| !! | ATCATCCCTGATGGTGGATG+AGG | + | chr7.4:40265556-40265575 | None:intergenic | 50.0% |
| !! | TCATCCCTGATGGTGGATGA+GGG | + | chr7.4:40265555-40265574 | None:intergenic | 50.0% |
| !! | TGGTTCTAATGTCTGGAGGG+GGG | + | chr7.4:40263894-40263913 | None:intergenic | 50.0% |
| !! | TTCTGGTTCCTTTGGAAGCG+AGG | + | chr7.4:40265647-40265666 | None:intergenic | 50.0% |
| ACCACGCTCTCTCAAGGCTA+GGG | + | chr7.4:40265968-40265987 | None:intergenic | 55.0% | |
| ACCTCCTCAAGGGTCATTGG+AGG | + | chr7.4:40264645-40264664 | None:intergenic | 55.0% | |
| AGCGGAAGAGGACGAACTGA+AGG | + | chr7.4:40265340-40265359 | None:intergenic | 55.0% | |
| CCATCAATTCCTCCACCACC+TGG | - | chr7.4:40265502-40265521 | MS.gene055186:CDS | 55.0% | |
| CTCACCCTCATCCACCATCA+GGG | - | chr7.4:40265548-40265567 | MS.gene055186:CDS | 55.0% | |
| GGAGTGAACTGAGATCCAGG+TGG | + | chr7.4:40265520-40265539 | None:intergenic | 55.0% | |
| GGCGTTCACAAGAGCAAGCT+AGG | - | chr7.4:40264502-40264521 | MS.gene055186:CDS | 55.0% | |
| GTGAACTGAGATCCAGGTGG+TGG | + | chr7.4:40265517-40265536 | None:intergenic | 55.0% | |
| TCCTCCAATGACCCTTGAGG+AGG | - | chr7.4:40264641-40264660 | MS.gene055186:CDS | 55.0% | |
| TCTACCACCACGCTCTCTCA+AGG | + | chr7.4:40265974-40265993 | None:intergenic | 55.0% | |
| TCTGCAGGAAGCCTGTCTTC+TGG | + | chr7.4:40264879-40264898 | None:intergenic | 55.0% | |
| TCTTGGTCCTCTCTCCATCG+AGG | - | chr7.4:40263816-40263835 | MS.gene055186:CDS | 55.0% | |
| TTTCGATCAGTGGGAGGAGC+GGG | + | chr7.4:40263796-40263815 | None:intergenic | 55.0% | |
| ! | AACTGAGATCCAGGTGGTGG+AGG | + | chr7.4:40265514-40265533 | None:intergenic | 55.0% |
| ! | GAAGGCATACCAGGTCTTGG+AGG | + | chr7.4:40265322-40265341 | None:intergenic | 55.0% |
| ! | GGACGAACTGAAGGCATACC+AGG | + | chr7.4:40265331-40265350 | None:intergenic | 55.0% |
| !! | AGAGGCCCAGCTTGTTGAAG+AGG | - | chr7.4:40264746-40264765 | MS.gene055186:CDS | 55.0% |
| !! | ATGTGCATGCCTGGTCTTGG+TGG | + | chr7.4:40265451-40265470 | None:intergenic | 55.0% |
| !! | CCAGGTGGTGGAGGAATTGA+TGG | + | chr7.4:40265505-40265524 | None:intergenic | 55.0% |
| !! | GAGGCCCAGCTTGTTGAAGA+GGG | - | chr7.4:40264747-40264766 | MS.gene055186:CDS | 55.0% |
| !! | TATCGGTGCTGCTTCCTCGA+TGG | + | chr7.4:40263833-40263852 | None:intergenic | 55.0% |
| !! | TGTGCATGCCTGGTCTTGGT+GGG | + | chr7.4:40265450-40265469 | None:intergenic | 55.0% |
| AGCTCCTCCCTCGCTTCCAA+AGG | - | chr7.4:40265636-40265655 | MS.gene055186:CDS | 60.0% | |
| ATGGATGCATTGGGGGTGGC+CGG | + | chr7.4:40265486-40265505 | None:intergenic | 60.0% | |
| CACCACGCTCTCTCAAGGCT+AGG | + | chr7.4:40265969-40265988 | None:intergenic | 60.0% | |
| GATACTCCTTGAGGCGGAGG+TGG | + | chr7.4:40265595-40265614 | None:intergenic | 60.0% | |
| GCTCACCCTCATCCACCATC+AGG | - | chr7.4:40265547-40265566 | MS.gene055186:CDS | 60.0% | |
| GCTGCTTCCTCGATGGAGAG+AGG | + | chr7.4:40263826-40263845 | None:intergenic | 60.0% | |
| GGCATACCAGGTCTTGGAGG+AGG | + | chr7.4:40265319-40265338 | None:intergenic | 60.0% | |
| GGTGGGGATACTCCTTGAGG+CGG | + | chr7.4:40265601-40265620 | None:intergenic | 60.0% | |
| TCAACAACCTGGGGCTGCAC+TGG | - | chr7.4:40264086-40264105 | MS.gene055186:CDS | 60.0% | |
| TCAGTGGGAGGAGCGGGTAA+AGG | + | chr7.4:40263790-40263809 | None:intergenic | 60.0% | |
| TCAGTTTCCAGTGCAGCCCC+AGG | + | chr7.4:40264096-40264115 | None:intergenic | 60.0% | |
| ! | GGTTCCTTTGGAAGCGAGGG+AGG | + | chr7.4:40265643-40265662 | None:intergenic | 60.0% |
| !! | AGTCCAGGTGGTAGCGGAAG+AGG | + | chr7.4:40265352-40265371 | None:intergenic | 60.0% |
| !! | CTAGCCTTGAGAGAGCGTGG+TGG | - | chr7.4:40265967-40265986 | MS.gene055186:CDS | 60.0% |
| !! | GTCTTGGTGGGGGCATTGGA+AGG | + | chr7.4:40265438-40265457 | None:intergenic | 60.0% |
| !! | GTGCATGCCTGGTCTTGGTG+GGG | + | chr7.4:40265449-40265468 | None:intergenic | 60.0% |
| !! | TCCCTAGCCTTGAGAGAGCG+TGG | - | chr7.4:40265964-40265983 | MS.gene055186:CDS | 60.0% |
| !! | TGCATGCCTGGTCTTGGTGG+GGG | + | chr7.4:40265448-40265467 | None:intergenic | 60.0% |
| ACTCCTTGAGGCGGAGGTGG+TGG | + | chr7.4:40265592-40265611 | None:intergenic | 65.0% | |
| AGCGAGGGAGGAGCTTCCTC+AGG | + | chr7.4:40265631-40265650 | None:intergenic | 65.0% | |
| CATCCACCACCTCCGCCTCA+AGG | - | chr7.4:40265586-40265605 | MS.gene055186:CDS | 65.0% | |
| CCAATGCCCCCACCAAGACC+AGG | - | chr7.4:40265439-40265458 | MS.gene055186:CDS | 65.0% | |
| CGTCCTCTTCCGCTACCACC+TGG | - | chr7.4:40265346-40265365 | MS.gene055186:CDS | 65.0% | |
| GAGGGAGGAGCTTCCTCAGG+AGG | + | chr7.4:40265628-40265647 | None:intergenic | 65.0% | |
| GCTGCACCTCCTCCAAGACC+TGG | - | chr7.4:40265310-40265329 | MS.gene055186:CDS | 65.0% | |
| GGAGCTTCCTCAGGAGGTGG+CGG | + | chr7.4:40265622-40265641 | None:intergenic | 65.0% | |
| GGAGGAGCTTCCTCAGGAGG+TGG | + | chr7.4:40265625-40265644 | None:intergenic | 65.0% | |
| GGCGGTGGGGATACTCCTTG+AGG | + | chr7.4:40265604-40265623 | None:intergenic | 65.0% | |
| GGGGATACTCCTTGAGGCGG+AGG | + | chr7.4:40265598-40265617 | None:intergenic | 65.0% | |
| ! | CTTCCTCAGGAGGTGGCGGT+GGG | + | chr7.4:40265618-40265637 | None:intergenic | 65.0% |
| ! | GGTCTTGGAGGAGGTGCAGC+TGG | + | chr7.4:40265310-40265329 | None:intergenic | 65.0% |
| ! | TTCCTCAGGAGGTGGCGGTG+GGG | + | chr7.4:40265617-40265636 | None:intergenic | 65.0% |
| !! | CCTGGTCTTGGTGGGGGCAT+TGG | + | chr7.4:40265442-40265461 | None:intergenic | 65.0% |
| ATCCCCACCGCCACCTCCTG+AGG | - | chr7.4:40265612-40265631 | MS.gene055186:CDS | 70.0% | |
| GAGGTGCAGCTGGACCGAGG+AGG | + | chr7.4:40265300-40265319 | None:intergenic | 70.0% | |
| ! | GAGGAGGTGCAGCTGGACCG+AGG | + | chr7.4:40265303-40265322 | None:intergenic | 70.0% |
| ! | GCTTCCTCAGGAGGTGGCGG+TGG | + | chr7.4:40265619-40265638 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 40263763 | 40266002 | 40263763 | ID=MS.gene055186 |
| chr7.4 | mRNA | 40263763 | 40266002 | 40263763 | ID=MS.gene055186.t1;Parent=MS.gene055186 |
| chr7.4 | exon | 40264624 | 40266002 | 40264624 | ID=MS.gene055186.t1.exon1;Parent=MS.gene055186.t1 |
| chr7.4 | CDS | 40264624 | 40266002 | 40264624 | ID=cds.MS.gene055186.t1;Parent=MS.gene055186.t1 |
| chr7.4 | exon | 40263763 | 40264558 | 40263763 | ID=MS.gene055186.t1.exon2;Parent=MS.gene055186.t1 |
| chr7.4 | CDS | 40263763 | 40264558 | 40263763 | ID=cds.MS.gene055186.t1;Parent=MS.gene055186.t1 |
| Gene Sequence |
| Protein sequence |
