Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56071.t1 | XP_003607905.1 | 95.8 | 577 | 14 | 1 | 166 | 742 | 55 | 621 | 0.00E+00 | 1110.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56071.t1 | Q9SSL1 | 55.5 | 164 | 73 | 0 | 1 | 164 | 1 | 164 | 5.5e-48 | 194.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56071.t1 | G7JJZ2 | 95.8 | 577 | 14 | 1 | 166 | 742 | 55 | 621 | 0.0e+00 | 1110.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene56071 | -0.8193 | 1.25E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene56071 | -0.84659 | 1.97E-59 | -1.69E-46 |
| MS.gene05081 | MS.gene56071 | 0.820344 | 7.21E-53 | -1.69E-46 |
| MS.gene051208 | MS.gene56071 | 0.832144 | 1.12E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene56071 | 0.817947 | 2.53E-52 | -1.69E-46 |
| MS.gene051552 | MS.gene56071 | -0.82416 | 9.38E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene56071 | -0.81982 | 9.50E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene56071 | 0.832666 | 8.30E-56 | -1.69E-46 |
| MS.gene052135 | MS.gene56071 | 0.812029 | 5.21E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene56071 | 0.819407 | 1.18E-52 | -1.69E-46 |
| MS.gene052589 | MS.gene56071 | 0.858912 | 5.95E-63 | -1.69E-46 |
| MS.gene052590 | MS.gene56071 | 0.828543 | 8.48E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene56071 | 0.879174 | 1.54E-69 | -1.69E-46 |
| MS.gene054102 | MS.gene56071 | 0.811607 | 6.43E-51 | -1.69E-46 |
| MS.gene054107 | MS.gene56071 | 0.800056 | 1.72E-48 | -1.69E-46 |
| MS.gene054110 | MS.gene56071 | 0.826829 | 2.19E-54 | -1.69E-46 |
| MS.gene054719 | MS.gene56071 | 0.804063 | 2.59E-49 | -1.69E-46 |
| MS.gene054809 | MS.gene56071 | -0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene054810 | MS.gene56071 | -0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene055370 | MS.gene56071 | 0.863596 | 2.22E-64 | -1.69E-46 |
| MS.gene055488 | MS.gene56071 | -0.815582 | 8.59E-52 | -1.69E-46 |
| MS.gene055501 | MS.gene56071 | 0.831437 | 1.67E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene56071 | 0.830153 | 3.45E-55 | -1.69E-46 |
| MS.gene05569 | MS.gene56071 | 0.814531 | 1.47E-51 | -1.69E-46 |
| MS.gene056305 | MS.gene56071 | 0.805208 | 1.49E-49 | -1.69E-46 |
| MS.gene056337 | MS.gene56071 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene56071 | 0.867887 | 9.82E-66 | -1.69E-46 |
| MS.gene056633 | MS.gene56071 | 0.877018 | 8.79E-69 | -1.69E-46 |
| MS.gene056664 | MS.gene56071 | 0.809612 | 1.74E-50 | -1.69E-46 |
| MS.gene056877 | MS.gene56071 | 0.800859 | 1.18E-48 | -1.69E-46 |
| MS.gene057196 | MS.gene56071 | 0.824131 | 9.53E-54 | -1.69E-46 |
| MS.gene057332 | MS.gene56071 | 0.814701 | 1.35E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene56071 | 0.807463 | 4.99E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene56071 | 0.866827 | 2.14E-65 | -1.69E-46 |
| MS.gene059512 | MS.gene56071 | 0.926229 | 6.25E-91 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56071 | MS.gene54796 | PPI |
| MS.gene56071 | MS.gene49437 | PPI |
| MS.gene56071 | MS.gene005970 | PPI |
| MS.gene56071 | MS.gene34039 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56071.t1 | MTR_4g084270 | 95.841 | 577 | 14 | 1 | 166 | 742 | 55 | 621 | 0.0 | 1143 |
| MS.gene56071.t1 | MTR_1g094980 | 42.152 | 567 | 273 | 13 | 182 | 736 | 18 | 541 | 1.17e-131 | 401 |
| MS.gene56071.t1 | MTR_1g094980 | 42.152 | 567 | 273 | 13 | 182 | 736 | 90 | 613 | 2.44e-130 | 400 |
| MS.gene56071.t1 | MTR_4g084280 | 96.491 | 171 | 6 | 0 | 1 | 171 | 1 | 171 | 1.24e-114 | 343 |
| MS.gene56071.t1 | MTR_1g031650 | 66.871 | 163 | 53 | 1 | 3 | 164 | 4 | 166 | 1.57e-70 | 228 |
| MS.gene56071.t1 | MTR_1g031650 | 69.531 | 128 | 39 | 0 | 37 | 164 | 2 | 129 | 2.28e-58 | 194 |
| MS.gene56071.t1 | MTR_3g067585 | 54.601 | 163 | 74 | 0 | 1 | 163 | 1 | 163 | 9.66e-58 | 194 |
| MS.gene56071.t1 | MTR_8g107340 | 51.220 | 164 | 80 | 0 | 1 | 164 | 17 | 180 | 1.82e-52 | 180 |
| MS.gene56071.t1 | MTR_2g011590 | 51.235 | 162 | 79 | 0 | 3 | 164 | 2 | 163 | 1.55e-51 | 177 |
| MS.gene56071.t1 | MTR_6g069470 | 49.390 | 164 | 83 | 0 | 1 | 164 | 13 | 176 | 6.80e-50 | 173 |
| MS.gene56071.t1 | MTR_8g088320 | 40.000 | 160 | 95 | 1 | 1 | 159 | 161 | 320 | 2.37e-31 | 125 |
| MS.gene56071.t1 | MTR_2g030230 | 38.889 | 162 | 94 | 3 | 1 | 159 | 168 | 327 | 1.46e-28 | 117 |
| MS.gene56071.t1 | MTR_3g017500 | 38.889 | 162 | 98 | 1 | 1 | 161 | 209 | 370 | 3.56e-27 | 114 |
| MS.gene56071.t1 | MTR_8g038400 | 37.654 | 162 | 100 | 1 | 1 | 161 | 206 | 367 | 4.44e-27 | 114 |
| MS.gene56071.t1 | MTR_3g017500 | 38.889 | 162 | 98 | 1 | 1 | 161 | 239 | 400 | 8.62e-27 | 114 |
| MS.gene56071.t1 | MTR_2g027100 | 38.158 | 152 | 92 | 2 | 1 | 150 | 1 | 152 | 2.13e-26 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56071.t1 | AT1G70820 | 77.661 | 573 | 111 | 4 | 167 | 736 | 53 | 611 | 0.0 | 932 |
| MS.gene56071.t1 | AT1G70820 | 78.623 | 552 | 101 | 4 | 167 | 715 | 53 | 590 | 0.0 | 909 |
| MS.gene56071.t1 | AT5G17530 | 43.309 | 538 | 252 | 12 | 179 | 703 | 13 | 510 | 3.39e-129 | 395 |
| MS.gene56071.t1 | AT5G17530 | 43.309 | 538 | 252 | 12 | 179 | 703 | 52 | 549 | 1.89e-128 | 394 |
| MS.gene56071.t1 | AT5G17530 | 43.309 | 538 | 252 | 12 | 179 | 703 | 52 | 549 | 1.89e-128 | 394 |
| MS.gene56071.t1 | AT5G17530 | 43.309 | 538 | 252 | 12 | 179 | 703 | 52 | 549 | 1.89e-128 | 394 |
| MS.gene56071.t1 | AT5G17530 | 43.309 | 538 | 252 | 12 | 179 | 703 | 52 | 549 | 1.89e-128 | 394 |
| MS.gene56071.t1 | AT5G17530 | 43.309 | 538 | 252 | 12 | 179 | 703 | 85 | 582 | 6.00e-128 | 394 |
| MS.gene56071.t1 | AT5G17530 | 43.633 | 534 | 248 | 12 | 179 | 699 | 85 | 578 | 5.40e-127 | 392 |
| MS.gene56071.t1 | AT1G70810 | 55.488 | 164 | 73 | 0 | 1 | 164 | 1 | 164 | 4.03e-57 | 192 |
| MS.gene56071.t1 | AT1G48590 | 55.090 | 167 | 72 | 1 | 1 | 167 | 37 | 200 | 9.95e-56 | 189 |
| MS.gene56071.t1 | AT1G48590 | 55.090 | 167 | 72 | 1 | 1 | 167 | 6 | 169 | 1.08e-55 | 188 |
| MS.gene56071.t1 | AT1G48590 | 55.090 | 167 | 72 | 1 | 1 | 167 | 6 | 169 | 1.08e-55 | 188 |
| MS.gene56071.t1 | AT1G70790 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 6.09e-54 | 184 |
| MS.gene56071.t1 | AT1G70790 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 6.09e-54 | 184 |
| MS.gene56071.t1 | AT1G70790 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 6.09e-54 | 184 |
| MS.gene56071.t1 | AT3G17980 | 51.829 | 164 | 79 | 0 | 1 | 164 | 13 | 176 | 7.58e-53 | 181 |
| MS.gene56071.t1 | AT1G23140 | 51.852 | 162 | 78 | 0 | 1 | 162 | 1 | 162 | 3.71e-52 | 179 |
| MS.gene56071.t1 | AT2G01540 | 55.195 | 154 | 67 | 1 | 5 | 156 | 6 | 159 | 4.06e-52 | 179 |
| MS.gene56071.t1 | AT1G73580 | 48.780 | 164 | 84 | 0 | 1 | 164 | 4 | 167 | 4.57e-52 | 178 |
| MS.gene56071.t1 | AT1G70800 | 50.955 | 157 | 77 | 0 | 1 | 157 | 10 | 166 | 7.39e-50 | 172 |
| MS.gene56071.t1 | AT1G66360 | 47.531 | 162 | 83 | 1 | 1 | 160 | 1 | 162 | 1.78e-47 | 166 |
| MS.gene56071.t1 | AT5G37740 | 46.707 | 167 | 86 | 1 | 1 | 164 | 1 | 167 | 5.15e-46 | 162 |
| MS.gene56071.t1 | AT5G37740 | 44.068 | 177 | 86 | 2 | 1 | 164 | 1 | 177 | 8.70e-43 | 153 |
| MS.gene56071.t1 | AT1G70790 | 55.385 | 130 | 56 | 1 | 39 | 166 | 3 | 132 | 2.08e-41 | 148 |
| MS.gene56071.t1 | AT1G48590 | 45.509 | 167 | 56 | 2 | 1 | 167 | 37 | 168 | 9.81e-39 | 141 |
| MS.gene56071.t1 | AT4G05330 | 41.875 | 160 | 88 | 3 | 1 | 157 | 140 | 297 | 1.27e-30 | 122 |
| MS.gene56071.t1 | AT4G05330 | 41.875 | 160 | 88 | 3 | 1 | 157 | 175 | 332 | 3.42e-30 | 122 |
| MS.gene56071.t1 | AT4G05330 | 41.875 | 160 | 88 | 3 | 1 | 157 | 175 | 332 | 3.42e-30 | 122 |
| MS.gene56071.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 4.33e-30 | 122 |
| MS.gene56071.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 4.33e-30 | 122 |
| MS.gene56071.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 4.33e-30 | 122 |
| MS.gene56071.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 4.33e-30 | 122 |
| MS.gene56071.t1 | AT3G07940 | 39.506 | 162 | 97 | 1 | 1 | 161 | 224 | 385 | 1.01e-28 | 119 |
| MS.gene56071.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.85e-28 | 111 |
| MS.gene56071.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.85e-28 | 111 |
| MS.gene56071.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.85e-28 | 111 |
| MS.gene56071.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.85e-28 | 111 |
Find 174 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATAAGTTTGTTGAAAA+TGG | 0.159254 | 4.3:-27361363 | MS.gene56071:CDS |
| AACTCCACTTAAGGGATTTC+AGG | 0.200454 | 4.3:-27363828 | MS.gene56071:intron |
| TCAATCTTAAACTCATTTCT+TGG | 0.237962 | 4.3:+27365870 | None:intergenic |
| TCTCCTTGATGATTTCTCTT+AGG | 0.241263 | 4.3:+27363876 | None:intergenic |
| GTACAGGAAGGGAGGCTTAA+AGG | 0.243975 | 4.3:-27361987 | MS.gene56071:intron |
| TTTCACTGTGGACGACAAAA+TGG | 0.248123 | 4.3:-27366047 | MS.gene56071:CDS |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4.3:+27362803 | None:intergenic |
| GATATCCTCTTGAGAATGTT+AGG | 0.280295 | 4.3:-27364347 | MS.gene56071:CDS |
| GTCAGTTCTTCATTCCATTC+AGG | 0.282274 | 4.3:+27366881 | None:intergenic |
| GAGGCAATATCAGAGAGTTT+TGG | 0.300966 | 4.3:-27364405 | MS.gene56071:CDS |
| ATCTTCACACATTGGAGATA+TGG | 0.313339 | 4.3:+27366001 | None:intergenic |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4.3:+27362648 | None:intergenic |
| TGCAAGTTCACAGCAATGTT+TGG | 0.318198 | 4.3:+27361584 | None:intergenic |
| TGGTTGTATGGTGTTTGATA+TGG | 0.318441 | 4.3:-27364250 | MS.gene56071:CDS |
| AATGGTTTAGAGAAGGAAAA+AGG | 0.330346 | 4.3:-27364369 | MS.gene56071:CDS |
| GCATTATGAAACTCCACTTA+AGG | 0.337071 | 4.3:-27363837 | MS.gene56071:CDS |
| TGCTTTAGCATTTCGAGGTT+CGG | 0.347623 | 4.3:+27362279 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4.3:-27362881 | MS.gene56071:CDS |
| GTTTCGATGGCAAACATTCT+AGG | 0.356912 | 4.3:-27367271 | None:intergenic |
| GCTAGGCAATTAGTCGTATC+TGG | 0.362744 | 4.3:+27365932 | None:intergenic |
| CATTATGAAACTCCACTTAA+GGG | 0.365922 | 4.3:-27363836 | MS.gene56071:CDS |
| TGTCTATGATGCTTCAATAA+TGG | 0.374026 | 4.3:-27364178 | MS.gene56071:CDS |
| GTCTTGACTACATGTCCATC+TGG | 0.383427 | 4.3:+27365962 | None:intergenic |
| TTCAAACCATTGCGTGTGTA+AGG | 0.384986 | 4.3:+27364052 | None:intergenic |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4.3:-27363046 | MS.gene56071:CDS |
| CTCGGATAAGCCTTTGCCTT+CGG | 0.389439 | 4.3:+27365790 | None:intergenic |
| ATGAAGAATTGGACAAGATT+AGG | 0.394518 | 4.3:-27364512 | MS.gene56071:CDS |
| GCAAGTTCACAGCAATGTTT+GGG | 0.402997 | 4.3:+27361585 | None:intergenic |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4.3:-27362557 | MS.gene56071:intron |
| TGTACGAGCATCGGTTACTA+TGG | 0.406310 | 4.3:+27362736 | None:intergenic |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4.3:-27361956 | MS.gene56071:CDS |
| TTTGGGGAGTGGGTTATCAA+TGG | 0.408829 | 4.3:-27364387 | MS.gene56071:CDS |
| GGTTGTATGGTGTTTGATAT+GGG | 0.413997 | 4.3:-27364249 | MS.gene56071:CDS |
| TACAGGAAGGGAGGCTTAAA+GGG | 0.417177 | 4.3:-27361986 | MS.gene56071:intron |
| CATGGCTGCCATTGTATTGA+AGG | 0.421469 | 4.3:-27362774 | MS.gene56071:CDS |
| TTGAGTGTTGCAGTGTTTGC+CGG | 0.424973 | 4.3:-27364285 | MS.gene56071:CDS |
| TCTTGCTCGTGCTGGTTGTA+TGG | 0.433556 | 4.3:-27364262 | MS.gene56071:CDS |
| TCGGGATTGGGAATGTGATT+AGG | 0.440559 | 4.3:+27362941 | None:intergenic |
| CAGAATGGTTCGGATGTTAG+AGG | 0.441225 | 4.3:-27364483 | MS.gene56071:CDS |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4.3:-27362995 | MS.gene56071:CDS |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4.3:+27362552 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4.3:+27362316 | None:intergenic |
| AGTAGTGGTGGATGAAGAAT+TGG | 0.460522 | 4.3:-27364523 | MS.gene56071:CDS |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4.3:+27362746 | None:intergenic |
| TCCATGGTGACAAGAACATA+AGG | 0.466228 | 4.3:+27367184 | None:intergenic |
| CAAACCTGAAATCCCTTAAG+TGG | 0.467227 | 4.3:+27363824 | None:intergenic |
| TTTGCCGGTCTTGCTCGTGC+TGG | 0.468617 | 4.3:-27364270 | MS.gene56071:CDS |
| GGACGCGACCCTCGAGTCAC+AGG | 0.474920 | 4.3:-27364315 | MS.gene56071:CDS |
| GTTGCATTGGAAGGCGAGAA+AGG | 0.478585 | 4.3:-27364459 | MS.gene56071:CDS |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4.3:-27362815 | MS.gene56071:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4.3:+27362956 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4.3:-27361955 | MS.gene56071:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4.3:-27362596 | MS.gene56071:CDS |
| CCATACGCAGCTACTCTCTT+CGG | 0.489124 | 4.3:+27365910 | None:intergenic |
| CCTCGAAATGCTAAAGCAAA+AGG | 0.489207 | 4.3:-27362274 | MS.gene56071:CDS |
| CCTCCACGGCAGGAGGAGTA+AGG | 0.491033 | 4.3:+27364424 | None:intergenic |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4.3:-27362401 | MS.gene56071:CDS |
| CTAACTAACTTGTTCTTCCA+TGG | 0.492512 | 4.3:+27367168 | None:intergenic |
| AGTAGCTGCGTATGGAGAGA+TGG | 0.493455 | 4.3:-27365902 | MS.gene56071:CDS |
| TCTGATATTGCCTCCACGGC+AGG | 0.494254 | 4.3:+27364414 | None:intergenic |
| ACTAAGTTTATAACTGATAG+AGG | 0.494389 | 4.3:-27362701 | MS.gene56071:CDS |
| AAGATAACTGCCATCCTGAA+TGG | 0.495110 | 4.3:-27366895 | MS.gene56071:CDS |
| CTTATGAATCAGTAGAACTT+AGG | 0.496088 | 4.3:-27362315 | MS.gene56071:CDS |
| TATCAATTTGAGCAATGTCT+AGG | 0.498567 | 4.3:+27361379 | None:intergenic |
| TAGGAGGCTTCAGAATGGTT+CGG | 0.500282 | 4.3:-27364493 | MS.gene56071:CDS |
| TGTTAACACACCAATACATC+TGG | 0.500731 | 4.3:-27366843 | MS.gene56071:intron |
| TTCACTGTGGACGACAAAAT+GGG | 0.505157 | 4.3:-27366046 | MS.gene56071:CDS |
| ATATCTCCAATGTGTGAAGA+TGG | 0.506001 | 4.3:-27365999 | MS.gene56071:CDS |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4.3:-27361944 | MS.gene56071:CDS |
| TCAAGGAGGTTGCTTGTCAA+TGG | 0.508461 | 4.3:-27361552 | MS.gene56071:CDS |
| TGAACATGGACAACATGGTT+GGG | 0.514106 | 4.3:-27361633 | MS.gene56071:CDS |
| ATGAACATGGACAACATGGT+TGG | 0.518204 | 4.3:-27361634 | MS.gene56071:CDS |
| GAGAATGTTAGGGTGTCTCT+TGG | 0.518716 | 4.3:-27364336 | MS.gene56071:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4.3:-27362370 | MS.gene56071:CDS |
| ATTGAAGCATCATAGACAAA+TGG | 0.520839 | 4.3:+27364183 | None:intergenic |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4.3:-27363058 | MS.gene56071:intron |
| TCGTAAATATGCAAATAGAT+TGG | 0.522642 | 4.3:-27363966 | MS.gene56071:CDS |
| ATATTGATGCTCAAATGTAC+AGG | 0.524473 | 4.3:-27361890 | MS.gene56071:intron |
| TGACAAACTCATTGCTCTCA+TGG | 0.524707 | 4.3:-27362792 | MS.gene56071:CDS |
| TGAGTACTGACCAGATGTAT+TGG | 0.524936 | 4.3:+27366833 | None:intergenic |
| TATCTCCAATGTGTGAAGAT+GGG | 0.525049 | 4.3:-27365998 | MS.gene56071:CDS |
| ATATAATGAAGGGGCCTACA+TGG | 0.525333 | 4.3:-27362425 | MS.gene56071:intron |
| TTTGAGCATCAATATGAGCC+GGG | 0.527926 | 4.3:+27361898 | None:intergenic |
| CATATTGTAAATCAGGCTGA+TGG | 0.528700 | 4.3:+27361339 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4.3:-27361945 | MS.gene56071:CDS |
| CCGAAGAGAGTAGCTGCGTA+TGG | 0.539890 | 4.3:-27365910 | MS.gene56071:CDS |
| ATTTGAGCATCAATATGAGC+CGG | 0.540769 | 4.3:+27361897 | None:intergenic |
| ATATCCTCTTGAGAATGTTA+GGG | 0.543188 | 4.3:-27364346 | MS.gene56071:CDS |
| ACAACCAGCACGAGCAAGAC+CGG | 0.545469 | 4.3:+27364266 | None:intergenic |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4.3:-27363052 | MS.gene56071:CDS |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4.3:+27362979 | None:intergenic |
| ATTGTATTGAAGGAAAATCC+AGG | 0.558299 | 4.3:-27362764 | MS.gene56071:CDS |
| CACCATTGTTTATACCGCGT+TGG | 0.558868 | 4.3:-27362674 | MS.gene56071:CDS |
| AACAATGAACATGGACAACA+TGG | 0.562336 | 4.3:-27361638 | MS.gene56071:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4.3:+27362546 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4.3:-27362364 | MS.gene56071:CDS |
| CGACCTTACTCCTCCTGCCG+TGG | 0.566388 | 4.3:-27364427 | MS.gene56071:CDS |
| GGTTATCAATGGTTTAGAGA+AGG | 0.568136 | 4.3:-27364376 | MS.gene56071:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4.3:-27363010 | MS.gene56071:CDS |
| CATTTGCCTTACACACGCAA+TGG | 0.572460 | 4.3:-27364058 | MS.gene56071:CDS |
| GGATGTTAGAGGAGTTGCAT+TGG | 0.576031 | 4.3:-27364472 | MS.gene56071:CDS |
| ATGGTCGGTTACATAAAACT+TGG | 0.576767 | 4.3:-27364159 | MS.gene56071:CDS |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4.3:-27362829 | MS.gene56071:CDS |
| ATTTAGACCCTGTGACTCGA+GGG | 0.578792 | 4.3:+27364307 | None:intergenic |
| GACAAGAACATAAGGGTCGC+TGG | 0.578982 | 4.3:+27367192 | None:intergenic |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.582640 | 4.3:-27362633 | MS.gene56071:CDS |
| CCTTACTCCTCCTGCCGTGG+AGG | 0.582653 | 4.3:-27364424 | MS.gene56071:CDS |
| AACTTGCAATCATCTGCTCA+AGG | 0.583771 | 4.3:-27361569 | MS.gene56071:CDS |
| AGATTGAGAAATGTTGACTC+TGG | 0.584076 | 4.3:-27365854 | MS.gene56071:CDS |
| GTTAGAGGAGTTGCATTGGA+AGG | 0.585950 | 4.3:-27364468 | MS.gene56071:CDS |
| CCCTTATGTTCTTGTCACCA+TGG | 0.587591 | 4.3:-27367185 | MS.gene56071:CDS |
| CCATGGTGACAAGAACATAA+GGG | 0.590675 | 4.3:+27367185 | None:intergenic |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4.3:-27362971 | MS.gene56071:CDS |
| AGTGGAGTTTCATAATGCAA+AGG | 0.592830 | 4.3:+27363842 | None:intergenic |
| ATATTGTAAATCAGGCTGAT+GGG | 0.593285 | 4.3:+27361340 | None:intergenic |
| ATGTTGCTGTACAGGAAGGG+AGG | 0.593434 | 4.3:-27361995 | MS.gene56071:intron |
| AAGAATTGGACAAGATTAGG+AGG | 0.597154 | 4.3:-27364509 | MS.gene56071:CDS |
| GATATTGCCTCCACGGCAGG+AGG | 0.597822 | 4.3:+27364417 | None:intergenic |
| CGCAGCTACTCTCTTCGGCT+AGG | 0.597984 | 4.3:+27365915 | None:intergenic |
| AAGATTAGGAGGCTTCAGAA+TGG | 0.602089 | 4.3:-27364498 | MS.gene56071:CDS |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4.3:-27362382 | MS.gene56071:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4.3:-27362385 | MS.gene56071:CDS |
| ACTCTCTGATATTGCCTCCA+CGG | 0.605057 | 4.3:+27364410 | None:intergenic |
| TCCCGAGGACAAAATTGCCA+TGG | 0.605099 | 4.3:-27362924 | MS.gene56071:CDS |
| GTTACAGAATCCGAAGGCAA+AGG | 0.605128 | 4.3:-27365800 | MS.gene56071:CDS |
| GGAAGGGAGGCTTAAAGGGT+GGG | 0.606977 | 4.3:-27361982 | MS.gene56071:CDS |
| AAGTACTAGTCGAAATTGAG+TGG | 0.607422 | 4.3:-27365829 | MS.gene56071:CDS |
| GACGCGACCCTCGAGTCACA+GGG | 0.611240 | 4.3:-27364314 | MS.gene56071:CDS |
| TCTTGACTACATGTCCATCT+GGG | 0.611492 | 4.3:+27365963 | None:intergenic |
| GATACCGATGTTGACAGAAG+CGG | 0.611913 | 4.3:-27362848 | MS.gene56071:CDS |
| GGGTTGAGCGATCTCCCAGA+TGG | 0.612527 | 4.3:-27365977 | MS.gene56071:CDS |
| AATTTAGACCCTGTGACTCG+AGG | 0.613432 | 4.3:+27364306 | None:intergenic |
| AATGTGCTCATGAAACAAGC+GGG | 0.613902 | 4.3:+27364213 | None:intergenic |
| AAATGCTAAAGCAAAAGGAT+CGG | 0.620165 | 4.3:-27362269 | MS.gene56071:CDS |
| GAAGCATCATAGACAAATGG+AGG | 0.622415 | 4.3:+27364186 | None:intergenic |
| TGCTAAAGCAAAAGGATCGG+AGG | 0.622933 | 4.3:-27362266 | MS.gene56071:CDS |
| GGAGTTCAGCTTAACAAGGA+GGG | 0.622995 | 4.3:-27362629 | MS.gene56071:CDS |
| CAATGTGCTCATGAAACAAG+CGG | 0.623267 | 4.3:+27364212 | None:intergenic |
| GACACCCTAACATTCTCAAG+AGG | 0.625174 | 4.3:+27364342 | None:intergenic |
| CGACATGCTTGTACGAGCAT+CGG | 0.627032 | 4.3:+27362727 | None:intergenic |
| GTTCTTCATTCCATTCAGGA+TGG | 0.627122 | 4.3:+27366885 | None:intergenic |
| AGGAAGGGAGGCTTAAAGGG+TGG | 0.627499 | 4.3:-27361983 | MS.gene56071:CDS |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4.3:-27362830 | MS.gene56071:CDS |
| TATGATGCTTCAATAATGGT+CGG | 0.628222 | 4.3:-27364174 | MS.gene56071:CDS |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4.3:-27362369 | MS.gene56071:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4.3:-27363043 | MS.gene56071:CDS |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4.3:-27362650 | MS.gene56071:CDS |
| ATCTCCAATGTGTGAAGATG+GGG | 0.633945 | 4.3:-27365997 | MS.gene56071:CDS |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4.3:-27362590 | MS.gene56071:CDS |
| TGCAAAGTATGATGAAGTAG+TGG | 0.641435 | 4.3:-27364538 | MS.gene56071:intron |
| AACATGGTTGGGTACACATG+AGG | 0.643450 | 4.3:-27361622 | MS.gene56071:CDS |
| AAAGTATCAAACAATGAACA+TGG | 0.643511 | 4.3:-27361647 | MS.gene56071:CDS |
| GCACCTAAGAGAAATCATCA+AGG | 0.645515 | 4.3:-27363879 | MS.gene56071:CDS |
| AACCAACGCGGTATAAACAA+TGG | 0.648208 | 4.3:+27362672 | None:intergenic |
| TTTAAGCAGAGTAGACACTC+TGG | 0.648407 | 4.3:+27363943 | None:intergenic |
| TCAACCCCATCTTCACACAT+TGG | 0.658196 | 4.3:+27365993 | None:intergenic |
| CGACAAAGACACTTTCACTG+TGG | 0.661032 | 4.3:-27366059 | MS.gene56071:CDS |
| GGGTGGGAGTTAGACTCATG+TGG | 0.663424 | 4.3:-27361966 | MS.gene56071:CDS |
| GGGTGTCATTTGTATCAACA+AGG | 0.663565 | 4.3:+27361919 | None:intergenic |
| AGGAGTTCAGCTTAACAAGG+AGG | 0.668823 | 4.3:-27362630 | MS.gene56071:CDS |
| CGATGTTGACAGAAGCGGCG+TGG | 0.670101 | 4.3:-27362843 | MS.gene56071:CDS |
| TTGAGCATCAATATGAGCCG+GGG | 0.674597 | 4.3:+27361899 | None:intergenic |
| TAATGAAGGGGCCTACATGG+TGG | 0.680927 | 4.3:-27362422 | MS.gene56071:intron |
| TGTTGATACAAATGACACCC+CGG | 0.681662 | 4.3:-27361916 | MS.gene56071:CDS |
| ATTGATGTTACAGAATCCGA+AGG | 0.687927 | 4.3:-27365806 | MS.gene56071:CDS |
| AAAGTATGATGAAGTAGTGG+TGG | 0.692926 | 4.3:-27364535 | MS.gene56071:intron |
| TAATCACATTCCCAATCCCG+AGG | 0.693986 | 4.3:-27362939 | MS.gene56071:CDS |
| CGAAGGCAAAGGCTTATCCG+AGG | 0.695987 | 4.3:-27365789 | MS.gene56071:intron |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4.3:-27362698 | MS.gene56071:CDS |
| TTGCAATCATCTGCTCAAGG+AGG | 0.704569 | 4.3:-27361566 | MS.gene56071:CDS |
| TGACATTTCGGTAACCAACG+CGG | 0.705467 | 4.3:+27362660 | None:intergenic |
| CACGCCGCTTCTGTCAACAT+CGG | 0.714678 | 4.3:+27362844 | None:intergenic |
| TCGCTGGTACGAGAATCATG+AGG | 0.744769 | 4.3:+27367208 | None:intergenic |
| AACATTTCGAAACTACATCG+AGG | 0.755001 | 4.3:-27362236 | MS.gene56071:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAAAGGAAAAA+TGG | - | chr4.3:27361850-27361869 | MS.gene56071:intron | 10.0% |
| !! | AAATAAATAAAAGGAAAAAT+GGG | - | chr4.3:27361851-27361870 | MS.gene56071:intron | 10.0% |
| !!! | ACATTTATTTTTTACAAAAA+AGG | - | chr4.3:27366852-27366871 | MS.gene56071:CDS | 10.0% |
| !! | AAGATCTTAATATATTGAAT+AGG | + | chr4.3:27364897-27364916 | None:intergenic | 15.0% |
| !! | AGATCTTAATATATTGAATA+GGG | + | chr4.3:27364896-27364915 | None:intergenic | 15.0% |
| !! | ATTCAATATATTAAGATCTT+AGG | - | chr4.3:27364897-27364916 | MS.gene56071:intron | 15.0% |
| !! | CAAAAGAGAAAATAAATAAA+AGG | - | chr4.3:27361842-27361861 | MS.gene56071:intron | 15.0% |
| !! | TCATTATCAAATTAAGATTA+AGG | + | chr4.3:27362956-27362975 | None:intergenic | 15.0% |
| !! | TGAAAAAATCCTTATATTTA+AGG | + | chr4.3:27366821-27366840 | None:intergenic | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | + | chr4.3:27367185-27367204 | None:intergenic | 15.0% |
| !! | TTATGATATGTTACTATAAA+TGG | - | chr4.3:27361670-27361689 | MS.gene56071:intron | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | - | chr4.3:27366180-27366199 | MS.gene56071:intron | 15.0% |
| !! | TTTCTGTATATATATAATGA+AGG | - | chr4.3:27366179-27366198 | MS.gene56071:intron | 15.0% |
| !! | TTTGAATTTAAATTAACCAT+AGG | - | chr4.3:27362230-27362249 | MS.gene56071:intron | 15.0% |
| !!! | AAATTTTCAAAGAAAATAGA+GGG | + | chr4.3:27365504-27365523 | None:intergenic | 15.0% |
| !!! | AATCTTAGAAATTTTATCTT+AGG | + | chr4.3:27362098-27362117 | None:intergenic | 15.0% |
| !!! | ATCTTAGAAATTTTATCTTA+GGG | + | chr4.3:27362097-27362116 | None:intergenic | 15.0% |
| !!! | ATTGAAATTTATTTTTGTGT+AGG | - | chr4.3:27363416-27363435 | MS.gene56071:intron | 15.0% |
| !!! | TAAATTTTCAAAGAAAATAG+AGG | + | chr4.3:27365505-27365524 | None:intergenic | 15.0% |
| !!! | TTATAGTCATATTTTGAAAA+TGG | + | chr4.3:27363155-27363174 | None:intergenic | 15.0% |
| !!! | TTATCTTAGAAATTTTATCT+CGG | + | chr4.3:27362068-27362087 | None:intergenic | 15.0% |
| !!! | TTATTTTTTACAAAAAAGGA+CGG | - | chr4.3:27366856-27366875 | MS.gene56071:CDS | 15.0% |
| !! | AAACATTATCCAAGAAAATT+CGG | - | chr4.3:27363270-27363289 | MS.gene56071:intron | 20.0% |
| !! | ATAGTAGTCTAATAAATTAG+AGG | + | chr4.3:27361930-27361949 | None:intergenic | 20.0% |
| !! | CTTATTACAGATTTATTGAA+TGG | + | chr4.3:27364039-27364058 | None:intergenic | 20.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | - | chr4.3:27366809-27366828 | MS.gene56071:intron | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | - | chr4.3:27366214-27366233 | MS.gene56071:intron | 20.0% |
| !! | TACACGTATATAAAAAATTG+TGG | + | chr4.3:27366491-27366510 | None:intergenic | 20.0% |
| !! | TCTGTATATATATAATGAAG+GGG | - | chr4.3:27366181-27366200 | MS.gene56071:intron | 20.0% |
| !!! | ATCAACATAAAATACTGATT+TGG | + | chr4.3:27361533-27361552 | None:intergenic | 20.0% |
| !!! | ATCATTTTCAATTTCAAATG+TGG | - | chr4.3:27363072-27363091 | MS.gene56071:intron | 20.0% |
| !!! | ATTATGTATAGTACTTTTGA+AGG | + | chr4.3:27364483-27364502 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | - | chr4.3:27367252-27367271 | MS.gene56071:CDS | 20.0% |
| !!! | TAATGGTAGAAAATTTTATC+TGG | + | chr4.3:27363222-27363241 | None:intergenic | 20.0% |
| !!! | TAATGTTTCAAGTTTTGAAA+TGG | + | chr4.3:27363258-27363277 | None:intergenic | 20.0% |
| !!! | TCAATTTGAAACGAAAAAAA+CGG | + | chr4.3:27362477-27362496 | None:intergenic | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | + | chr4.3:27367124-27367143 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTTCCTGTTATAT+TGG | - | chr4.3:27363786-27363805 | MS.gene56071:intron | 20.0% |
| ! | AAATTAACCATAGGATCAAA+GGG | - | chr4.3:27362239-27362258 | MS.gene56071:CDS | 25.0% |
| ! | AATATATTGAATAGGGCATA+AGG | + | chr4.3:27364889-27364908 | None:intergenic | 25.0% |
| ! | AATTGCATTTAGACTTAGTT+TGG | + | chr4.3:27365425-27365444 | None:intergenic | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | - | chr4.3:27366588-27366607 | MS.gene56071:intron | 25.0% |
| ! | ACCACCAACAATTTAATATT+AGG | + | chr4.3:27362504-27362523 | None:intergenic | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | - | chr4.3:27365914-27365933 | MS.gene56071:CDS | 25.0% |
| ! | ACTAGTTAAACTGTTCAATT+CGG | + | chr4.3:27364955-27364974 | None:intergenic | 25.0% |
| ! | ACTTGTCTTGATAGATAAAT+AGG | - | chr4.3:27363358-27363377 | MS.gene56071:intron | 25.0% |
| ! | ATATTGGATTTGTAAGGTTA+TGG | - | chr4.3:27363802-27363821 | MS.gene56071:intron | 25.0% |
| ! | ATGAGAATCACAAACAAATA+CGG | - | chr4.3:27362382-27362401 | MS.gene56071:CDS | 25.0% |
| ! | ATTTAGAAGATACCAAATAC+AGG | + | chr4.3:27364858-27364877 | None:intergenic | 25.0% |
| ! | CAAAATGTGCTTATAAATAG+AGG | + | chr4.3:27366784-27366803 | None:intergenic | 25.0% |
| ! | GGAACTAATGACAAAATAAT+TGG | - | chr4.3:27363725-27363744 | MS.gene56071:intron | 25.0% |
| ! | GTAATAAGTGTGAAATGTTA+TGG | - | chr4.3:27364051-27364070 | MS.gene56071:CDS | 25.0% |
| ! | GTTATTTATTCAACAGATGA+CGG | - | chr4.3:27364529-27364548 | MS.gene56071:CDS | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | + | chr4.3:27367161-27367180 | None:intergenic | 25.0% |
| ! | TAAATTAACCATAGGATCAA+AGG | - | chr4.3:27362238-27362257 | MS.gene56071:CDS | 25.0% |
| ! | TAATTCAAATAAAGCAAGAG+CGG | - | chr4.3:27363866-27363885 | MS.gene56071:CDS | 25.0% |
| ! | TATTAAGATCTTAGGAACTA+CGG | - | chr4.3:27364905-27364924 | MS.gene56071:intron | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | - | chr4.3:27367146-27367165 | MS.gene56071:intron | 25.0% |
| ! | TCAATCTTAAACTCATTTCT+TGG | + | chr4.3:27362748-27362767 | None:intergenic | 25.0% |
| ! | TCGTAAATATGCAAATAGAT+TGG | - | chr4.3:27364649-27364668 | MS.gene56071:intron | 25.0% |
| ! | TCTAAGAACTGATTGAAATT+TGG | - | chr4.3:27361554-27361573 | MS.gene56071:CDS | 25.0% |
| ! | TTAATTTAAACATGACCTAG+AGG | - | chr4.3:27365161-27365180 | MS.gene56071:intron | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | - | chr4.3:27366093-27366112 | MS.gene56071:intron | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | - | chr4.3:27366968-27366987 | MS.gene56071:intron | 25.0% |
| !! | ACTAAGATCTTTCTTTTTAC+TGG | - | chr4.3:27361613-27361632 | MS.gene56071:CDS | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | - | chr4.3:27366524-27366543 | MS.gene56071:intron | 25.0% |
| !! | ATTTAGACTTAGTTTGGATT+AGG | + | chr4.3:27365419-27365438 | None:intergenic | 25.0% |
| !! | CATAAAAACTGACTTTATTG+AGG | - | chr4.3:27366932-27366951 | MS.gene56071:intron | 25.0% |
| !! | CTCCATTTTACAAATTTCTT+GGG | - | chr4.3:27363443-27363462 | MS.gene56071:intron | 25.0% |
| !! | CTCTATTTATAAGCACATTT+TGG | - | chr4.3:27366782-27366801 | MS.gene56071:intron | 25.0% |
| !! | TTAGTCTTCAAAATATCACA+TGG | - | chr4.3:27363704-27363723 | MS.gene56071:intron | 25.0% |
| !!! | AATTTTTTATGCGTTTCCTT+TGG | - | chr4.3:27361971-27361990 | MS.gene56071:CDS | 25.0% |
| !!! | TAAGCAAGTTTTAAGAGATA+AGG | + | chr4.3:27363846-27363865 | None:intergenic | 25.0% |
| !!! | TGAAATTTTTTACGAAGAGA+GGG | - | chr4.3:27364582-27364601 | MS.gene56071:intron | 25.0% |
| !!! | TTGAAATTTTTTACGAAGAG+AGG | - | chr4.3:27364581-27364600 | MS.gene56071:intron | 25.0% |
| AAAATGGTGAGCTAAATGTA+AGG | + | chr4.3:27363139-27363158 | None:intergenic | 30.0% | |
| AAAGCTAGTTGAAGTTTAGT+TGG | + | chr4.3:27366417-27366436 | None:intergenic | 30.0% | |
| AAATAACTGAACCGTAAACA+GGG | + | chr4.3:27365108-27365127 | None:intergenic | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | - | chr4.3:27366346-27366365 | MS.gene56071:intron | 30.0% | |
| AAATGGTGAGCTAAATGTAA+GGG | + | chr4.3:27363138-27363157 | None:intergenic | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | - | chr4.3:27365800-27365819 | MS.gene56071:CDS | 30.0% | |
| AAGTAATGTAGCCTAACAAA+TGG | - | chr4.3:27362330-27362349 | MS.gene56071:CDS | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | - | chr4.3:27365917-27365936 | MS.gene56071:CDS | 30.0% | |
| AATGGTTTAGAGAAGGAAAA+AGG | - | chr4.3:27364246-27364265 | MS.gene56071:CDS | 30.0% | |
| AATGTGCTTATAAATAGAGG+CGG | + | chr4.3:27366781-27366800 | None:intergenic | 30.0% | |
| ACGTAATATCTACTAGATAG+TGG | + | chr4.3:27363470-27363489 | None:intergenic | 30.0% | |
| ACTTTATTGAGGCAAATCAA+GGG | - | chr4.3:27366943-27366962 | MS.gene56071:intron | 30.0% | |
| ATAATAGTGAATGCTGGAAA+CGG | - | chr4.3:27365563-27365582 | MS.gene56071:intron | 30.0% | |
| ATATCCTCTTGAGAATGTTA+GGG | - | chr4.3:27364269-27364288 | MS.gene56071:CDS | 30.0% | |
| ATATCTTTGCAAACCAAACT+TGG | - | chr4.3:27363997-27364016 | MS.gene56071:CDS | 30.0% | |
| ATATTGATGCTCAAATGTAC+AGG | - | chr4.3:27366725-27366744 | MS.gene56071:intron | 30.0% | |
| ATCACACAAGTATAAACCAA+AGG | + | chr4.3:27361990-27362009 | None:intergenic | 30.0% | |
| ATCAGACTTCGTATCAAAAA+AGG | - | chr4.3:27361371-27361390 | MS.gene56071:CDS | 30.0% | |
| ATGAAGAATTGGACAAGATT+AGG | - | chr4.3:27364103-27364122 | MS.gene56071:intron | 30.0% | |
| ATGGCAAGGAAAGAAAATAA+TGG | + | chr4.3:27363239-27363258 | None:intergenic | 30.0% | |
| ATTGTATTGAAGGAAAATCC+AGG | - | chr4.3:27365851-27365870 | MS.gene56071:CDS | 30.0% | |
| CAATCTTACATAGTAACTTC+AGG | + | chr4.3:27362930-27362949 | None:intergenic | 30.0% | |
| CACAATGTGTCAAAATATGT+AGG | + | chr4.3:27366576-27366595 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | + | chr4.3:27366144-27366163 | None:intergenic | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | - | chr4.3:27366019-27366038 | MS.gene56071:CDS | 30.0% | |
| CATTATGAAACTCCACTTAA+GGG | - | chr4.3:27364779-27364798 | MS.gene56071:intron | 30.0% | |
| CCAAGAAATTTGTAAAATGG+AGG | + | chr4.3:27363445-27363464 | None:intergenic | 30.0% | |
| CCTGTTATATTGGATTTGTA+AGG | - | chr4.3:27363796-27363815 | MS.gene56071:intron | 30.0% | |
| CCTTACAAATCCAATATAAC+AGG | + | chr4.3:27363799-27363818 | None:intergenic | 30.0% | |
| CGAGCCTAATATTAAATTGT+TGG | - | chr4.3:27362497-27362516 | MS.gene56071:intron | 30.0% | |
| CTAATGCATAAAGTTAGAGA+AGG | + | chr4.3:27362872-27362891 | None:intergenic | 30.0% | |
| CTCAGTTGAAGATAAGTTTA+AGG | + | chr4.3:27362129-27362148 | None:intergenic | 30.0% | |
| CTTATGAATCAGTAGAACTT+AGG | - | chr4.3:27366300-27366319 | MS.gene56071:intron | 30.0% | |
| GCCTAATATTAAATTGTTGG+TGG | - | chr4.3:27362500-27362519 | MS.gene56071:intron | 30.0% | |
| GTCCCAAGAAATTTGTAAAA+TGG | + | chr4.3:27363448-27363467 | None:intergenic | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | + | chr4.3:27366072-27366091 | None:intergenic | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | + | chr4.3:27367239-27367258 | None:intergenic | 30.0% | |
| TATGATGCTTCAATAATGGT+CGG | - | chr4.3:27364441-27364460 | MS.gene56071:CDS | 30.0% | |
| TGATGTCAAATTCACTGATA+TGG | - | chr4.3:27362973-27362992 | MS.gene56071:CDS | 30.0% | |
| TGGTTTATACTTGTGTGATT+TGG | - | chr4.3:27361991-27362010 | MS.gene56071:intron | 30.0% | |
| TGTCTATGATGCTTCAATAA+TGG | - | chr4.3:27364437-27364456 | MS.gene56071:CDS | 30.0% | |
| TGTGATTTAAGCCATTTGTT+AGG | + | chr4.3:27362344-27362363 | None:intergenic | 30.0% | |
| TGTTACTATCATTCTTTGCT+AGG | - | chr4.3:27363967-27363986 | MS.gene56071:CDS | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | - | chr4.3:27365734-27365753 | MS.gene56071:intron | 30.0% | |
| TTCTGCAACTTAAACAAAGT+TGG | + | chr4.3:27361812-27361831 | None:intergenic | 30.0% | |
| TTGTTACATATGCCTGTATT+TGG | - | chr4.3:27364843-27364862 | MS.gene56071:intron | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | - | chr4.3:27366416-27366435 | MS.gene56071:intron | 30.0% |
| ! | AAGAAATTTTGAGCGTTTCT+GGG | + | chr4.3:27363499-27363518 | None:intergenic | 30.0% |
| ! | ATTGAAGCATCATAGACAAA+TGG | + | chr4.3:27364435-27364454 | None:intergenic | 30.0% |
| ! | CAAAGATGTTGAGAATTTTG+CGG | + | chr4.3:27363923-27363942 | None:intergenic | 30.0% |
| ! | CCTCCATTTTACAAATTTCT+TGG | - | chr4.3:27363442-27363461 | MS.gene56071:intron | 30.0% |
| ! | CTCATGAAATCAACTTTTGT+TGG | + | chr4.3:27364704-27364723 | None:intergenic | 30.0% |
| ! | GTAAAGAATCCGAATTTTCT+TGG | + | chr4.3:27363282-27363301 | None:intergenic | 30.0% |
| ! | TATAATTTTCACCACCATGT+AGG | + | chr4.3:27366207-27366226 | None:intergenic | 30.0% |
| ! | TGGATTTTCCTTCAATACAA+TGG | + | chr4.3:27365852-27365871 | None:intergenic | 30.0% |
| ! | TTTTTACAAAAAAGGACGGA+GGG | - | chr4.3:27366860-27366879 | MS.gene56071:CDS | 30.0% |
| !! | CTAAATGCAATTTTGAAGAG+AGG | - | chr4.3:27365433-27365452 | MS.gene56071:intron | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | + | chr4.3:27366302-27366321 | None:intergenic | 30.0% |
| !! | TTTATAAGCACATTTTGGAG+AGG | - | chr4.3:27366787-27366806 | MS.gene56071:intron | 30.0% |
| !!! | AAATTTTTTACGAAGAGAGG+GGG | - | chr4.3:27364584-27364603 | MS.gene56071:intron | 30.0% |
| !!! | CTACATATTTTGACACATTG+TGG | - | chr4.3:27366574-27366593 | MS.gene56071:intron | 30.0% |
| !!! | GAAATTTTTTACGAAGAGAG+GGG | - | chr4.3:27364583-27364602 | MS.gene56071:intron | 30.0% |
| !!! | TTTCAAGTTTTGAAATGGCA+AGG | + | chr4.3:27363253-27363272 | None:intergenic | 30.0% |
| !!! | TTTTTTACAAAAAAGGACGG+AGG | - | chr4.3:27366859-27366878 | MS.gene56071:CDS | 30.0% |
| AAAGTATGATGAAGTAGTGG+TGG | - | chr4.3:27364080-27364099 | MS.gene56071:intron | 35.0% | |
| AACAATGAACATGGACAACA+TGG | - | chr4.3:27366977-27366996 | MS.gene56071:intron | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | - | chr4.3:27366379-27366398 | MS.gene56071:intron | 35.0% | |
| AACTGAGTTCATCACAAACT+TGG | - | chr4.3:27362262-27362281 | MS.gene56071:CDS | 35.0% | |
| AAGAATTGGACAAGATTAGG+AGG | - | chr4.3:27364106-27364125 | MS.gene56071:intron | 35.0% | |
| AAGTACTAGTCGAAATTGAG+TGG | - | chr4.3:27362786-27362805 | MS.gene56071:CDS | 35.0% | |
| AATGGTGAGCTAAATGTAAG+GGG | + | chr4.3:27363137-27363156 | None:intergenic | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | + | chr4.3:27366066-27366085 | None:intergenic | 35.0% | |
| AGAAGATGAGAAACCAAGTT+TGG | + | chr4.3:27364013-27364032 | None:intergenic | 35.0% | |
| AGTGGAGTTTCATAATGCAA+AGG | + | chr4.3:27364776-27364795 | None:intergenic | 35.0% | |
| ATATCTCCAATGTGTGAAGA+TGG | - | chr4.3:27362616-27362635 | MS.gene56071:CDS | 35.0% | |
| ATCTTCACACATTGGAGATA+TGG | + | chr4.3:27362617-27362636 | None:intergenic | 35.0% | |
| ATGAGTTTGTCACCGTTTAT+TGG | + | chr4.3:27365815-27365834 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | - | chr4.3:27366025-27366044 | MS.gene56071:CDS | 35.0% | |
| ATGCCAGCTTATGAGTTAAA+AGG | + | chr4.3:27365380-27365399 | None:intergenic | 35.0% | |
| ATGGTCGGTTACATAAAACT+TGG | - | chr4.3:27364456-27364475 | MS.gene56071:CDS | 35.0% | |
| ATTGATGTTACAGAATCCGA+AGG | - | chr4.3:27362809-27362828 | MS.gene56071:CDS | 35.0% | |
| ATTTGAATACAGCGCATTAC+AGG | + | chr4.3:27365470-27365489 | None:intergenic | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | + | chr4.3:27366721-27366740 | None:intergenic | 35.0% | |
| CAAATAACTGAACCGTAAAC+AGG | + | chr4.3:27365109-27365128 | None:intergenic | 35.0% | |
| CATATCGTTGTCCAAAAACT+TGG | - | chr4.3:27362177-27362196 | MS.gene56071:intron | 35.0% | |
| CTACAGATAATAGTGAATGC+TGG | - | chr4.3:27365557-27365576 | MS.gene56071:intron | 35.0% | |
| CTATGGTTATTTGAGTGGTT+CGG | - | chr4.3:27365001-27365020 | MS.gene56071:intron | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | + | chr4.3:27365970-27365989 | None:intergenic | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | - | chr4.3:27366058-27366077 | MS.gene56071:CDS | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | - | chr4.3:27366230-27366249 | MS.gene56071:intron | 35.0% | |
| GACTTTATTGAGGCAAATCA+AGG | - | chr4.3:27366942-27366961 | MS.gene56071:intron | 35.0% | |
| GATATCCTCTTGAGAATGTT+AGG | - | chr4.3:27364268-27364287 | MS.gene56071:CDS | 35.0% | |
| GCATTATGAAACTCCACTTA+AGG | - | chr4.3:27364778-27364797 | MS.gene56071:intron | 35.0% | |
| GCGGCAAATAAAATCAACAA+TGG | - | chr4.3:27363885-27363904 | MS.gene56071:CDS | 35.0% | |
| GGTTATCAATGGTTTAGAGA+AGG | - | chr4.3:27364239-27364258 | MS.gene56071:CDS | 35.0% | |
| GGTTGTATGGTGTTTGATAT+GGG | - | chr4.3:27364366-27364385 | MS.gene56071:CDS | 35.0% | |
| GTAATCTGCAAGAATATACC+AGG | - | chr4.3:27363673-27363692 | MS.gene56071:intron | 35.0% | |
| TAAATGAGAGAGCTTCTCAA+AGG | + | chr4.3:27365353-27365372 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | - | chr4.3:27365965-27365984 | MS.gene56071:CDS | 35.0% | |
| TATCTCCAATGTGTGAAGAT+GGG | - | chr4.3:27362617-27362636 | MS.gene56071:CDS | 35.0% | |
| TGCAAAGTATGATGAAGTAG+TGG | - | chr4.3:27364077-27364096 | MS.gene56071:intron | 35.0% | |
| TGGTTGTATGGTGTTTGATA+TGG | - | chr4.3:27364365-27364384 | MS.gene56071:CDS | 35.0% | |
| TGTTAACACACCAATACATC+TGG | - | chr4.3:27361772-27361791 | MS.gene56071:intron | 35.0% | |
| TTTATGTTGCTGTACAGGAA+GGG | - | chr4.3:27366617-27366636 | MS.gene56071:intron | 35.0% | |
| ! | AGGCAATATCAGAGAGTTTT+GGG | - | chr4.3:27364211-27364230 | MS.gene56071:CDS | 35.0% |
| ! | CAAGAAATTTTGAGCGTTTC+TGG | + | chr4.3:27363500-27363519 | None:intergenic | 35.0% |
| ! | CTTACTGCTAGAAGTTGTTT+TGG | - | chr4.3:27363544-27363563 | MS.gene56071:intron | 35.0% |
| ! | TCTCCTTGATGATTTCTCTT+AGG | + | chr4.3:27364742-27364761 | None:intergenic | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | - | chr4.3:27366616-27366635 | MS.gene56071:intron | 35.0% |
| !! | AGATTGAGAAATGTTGACTC+TGG | - | chr4.3:27362761-27362780 | MS.gene56071:CDS | 35.0% |
| !! | CAAGTTTTTGGACAACGATA+TGG | + | chr4.3:27362179-27362198 | None:intergenic | 35.0% |
| !! | CTAACTAACTTGTTCTTCCA+TGG | + | chr4.3:27361450-27361469 | None:intergenic | 35.0% |
| !! | CTTCCTTTTAACTCATAAGC+TGG | - | chr4.3:27365374-27365393 | MS.gene56071:intron | 35.0% |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | - | chr4.3:27366612-27366631 | MS.gene56071:intron | 35.0% |
| !!! | AATTTTTTACGAAGAGAGGG+GGG | - | chr4.3:27364585-27364604 | MS.gene56071:intron | 35.0% |
| AACACAATTGACCATGCTTG+TGG | + | chr4.3:27363588-27363607 | None:intergenic | 40.0% | |
| AACCAACGCGGTATAAACAA+TGG | + | chr4.3:27365946-27365965 | None:intergenic | 40.0% | |
| AACTCCACTTAAGGGATTTC+AGG | - | chr4.3:27364787-27364806 | MS.gene56071:intron | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | - | chr4.3:27367046-27367065 | MS.gene56071:intron | 40.0% | |
| AAGATAACTGCCATCCTGAA+TGG | - | chr4.3:27361720-27361739 | MS.gene56071:intron | 40.0% | |
| AAGATTAGGAGGCTTCAGAA+TGG | - | chr4.3:27364117-27364136 | MS.gene56071:intron | 40.0% | |
| AATGTGCTCATGAAACAAGC+GGG | + | chr4.3:27364405-27364424 | None:intergenic | 40.0% | |
| AATTAGCAATGCCTGCACTA+TGG | - | chr4.3:27364984-27365003 | MS.gene56071:intron | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | - | chr4.3:27366660-27366679 | MS.gene56071:intron | 40.0% | |
| ATACGGCTGATGCATTGTAT+TGG | - | chr4.3:27362399-27362418 | MS.gene56071:CDS | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | - | chr4.3:27366190-27366209 | MS.gene56071:intron | 40.0% | |
| ATCTCCAATGTGTGAAGATG+GGG | - | chr4.3:27362618-27362637 | MS.gene56071:CDS | 40.0% | |
| ATGAACATGGACAACATGGT+TGG | - | chr4.3:27366981-27367000 | MS.gene56071:intron | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | - | chr4.3:27366233-27366252 | MS.gene56071:intron | 40.0% | |
| ATTGAATAGGGCATAAGGCA+AGG | + | chr4.3:27364884-27364903 | None:intergenic | 40.0% | |
| CAAACCTGAAATCCCTTAAG+TGG | + | chr4.3:27364794-27364813 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | - | chr4.3:27365982-27366001 | MS.gene56071:CDS | 40.0% | |
| CAATGTGCTCATGAAACAAG+CGG | + | chr4.3:27364406-27364425 | None:intergenic | 40.0% | |
| CACTCAAATAACCATAGTGC+AGG | + | chr4.3:27364998-27365017 | None:intergenic | 40.0% | |
| CAGTTTAACCATGACTCAGA+CGG | - | chr4.3:27365057-27365076 | MS.gene56071:intron | 40.0% | |
| CATAAGCTGGCATAAAGCAT+AGG | - | chr4.3:27365387-27365406 | MS.gene56071:intron | 40.0% | |
| CCATGAATTGACCCTGTTTA+CGG | - | chr4.3:27365094-27365113 | MS.gene56071:intron | 40.0% | |
| CCATGGTGACAAGAACATAA+GGG | + | chr4.3:27361433-27361452 | None:intergenic | 40.0% | |
| CCTCGAAATGCTAAAGCAAA+AGG | - | chr4.3:27366341-27366360 | MS.gene56071:intron | 40.0% | |
| CTGCACTATGGTTATTTGAG+TGG | - | chr4.3:27364996-27365015 | MS.gene56071:intron | 40.0% | |
| GATGTTGTAGCCTAGATGAA+GGG | - | chr4.3:27362441-27362460 | MS.gene56071:intron | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | + | chr4.3:27367033-27367052 | None:intergenic | 40.0% | |
| GCACCTAAGAGAAATCATCA+AGG | - | chr4.3:27364736-27364755 | MS.gene56071:intron | 40.0% | |
| GGAACTACGGCATTTATGAT+AGG | - | chr4.3:27364918-27364937 | MS.gene56071:intron | 40.0% | |
| GTACTCCTAAAACTCAACCT+CGG | + | chr4.3:27362846-27362865 | None:intergenic | 40.0% | |
| GTCAGTTCTTCATTCCATTC+AGG | + | chr4.3:27361737-27361756 | None:intergenic | 40.0% | |
| GTTCATCACAAACTTGGTTG+CGG | - | chr4.3:27362268-27362287 | MS.gene56071:CDS | 40.0% | |
| GTTCTTCATTCCATTCAGGA+TGG | + | chr4.3:27361733-27361752 | None:intergenic | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | - | chr4.3:27365605-27365624 | MS.gene56071:intron | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | - | chr4.3:27366659-27366678 | MS.gene56071:intron | 40.0% | |
| TCCATGGTGACAAGAACATA+AGG | + | chr4.3:27361434-27361453 | None:intergenic | 40.0% | |
| TCTTGACTACATGTCCATCT+GGG | + | chr4.3:27362655-27362674 | None:intergenic | 40.0% | |
| TGAACATGGACAACATGGTT+GGG | - | chr4.3:27366982-27367001 | MS.gene56071:intron | 40.0% | |
| TGAAGACTAAAATGTGTGCC+TGG | + | chr4.3:27363694-27363713 | None:intergenic | 40.0% | |
| TGACAAACTCATTGCTCTCA+TGG | - | chr4.3:27365823-27365842 | MS.gene56071:CDS | 40.0% | |
| TGATGTTGTAGCCTAGATGA+AGG | - | chr4.3:27362440-27362459 | MS.gene56071:intron | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | + | chr4.3:27365662-27365681 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | + | chr4.3:27367034-27367053 | None:intergenic | 40.0% | |
| TGCTTATAAATAGAGGCGGA+GGG | + | chr4.3:27366777-27366796 | None:intergenic | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | + | chr4.3:27366339-27366358 | None:intergenic | 40.0% | |
| TGTTGATACAAATGACACCC+CGG | - | chr4.3:27366699-27366718 | MS.gene56071:intron | 40.0% | |
| TTCAAACCATTGCGTGTGTA+AGG | + | chr4.3:27364566-27364585 | None:intergenic | 40.0% | |
| TTCACTGTGGACGACAAAAT+GGG | - | chr4.3:27362569-27362588 | MS.gene56071:CDS | 40.0% | |
| TTGAATAGGGCATAAGGCAA+GGG | + | chr4.3:27364883-27364902 | None:intergenic | 40.0% | |
| TTTAAGCAGAGTAGACACTC+TGG | + | chr4.3:27364675-27364694 | None:intergenic | 40.0% | |
| TTTCACTGTGGACGACAAAA+TGG | - | chr4.3:27362568-27362587 | MS.gene56071:CDS | 40.0% | |
| TTTCCTTCTCTATGAGTCAG+TGG | + | chr4.3:27365249-27365268 | None:intergenic | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | + | chr4.3:27366720-27366739 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | + | chr4.3:27366344-27366363 | None:intergenic | 40.0% |
| ! | CTGCTTTAAACCACTAGAAC+CGG | + | chr4.3:27365040-27365059 | None:intergenic | 40.0% |
| ! | CTTATCCGAGGTTGAGTTTT+AGG | - | chr4.3:27362838-27362857 | MS.gene56071:CDS | 40.0% |
| ! | GAAGCATCATAGACAAATGG+AGG | + | chr4.3:27364432-27364451 | None:intergenic | 40.0% |
| ! | GAGGCAATATCAGAGAGTTT+TGG | - | chr4.3:27364210-27364229 | MS.gene56071:CDS | 40.0% |
| ! | GGCAATATCAGAGAGTTTTG+GGG | - | chr4.3:27364212-27364231 | MS.gene56071:CDS | 40.0% |
| ! | TGAGAATTTTGCGGAAGTAG+AGG | + | chr4.3:27363914-27363933 | None:intergenic | 40.0% |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | - | chr4.3:27367201-27367220 | MS.gene56071:CDS | 40.0% |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | + | chr4.3:27365711-27365730 | None:intergenic | 40.0% |
| !! | AGTAGTGGTGGATGAAGAAT+TGG | - | chr4.3:27364092-27364111 | MS.gene56071:intron | 40.0% |
| !! | GGGTGTCATTTGTATCAACA+AGG | + | chr4.3:27366699-27366718 | None:intergenic | 40.0% |
| !! | TGAGTACTGACCAGATGTAT+TGG | + | chr4.3:27361785-27361804 | None:intergenic | 40.0% |
| AACATGGTTGGGTACACATG+AGG | - | chr4.3:27366993-27367012 | MS.gene56071:intron | 45.0% | |
| AATTTAGACCCTGTGACTCG+AGG | + | chr4.3:27364312-27364331 | None:intergenic | 45.0% | |
| ACATGACCTAGAGGTCTCAT+TGG | - | chr4.3:27365170-27365189 | MS.gene56071:intron | 45.0% | |
| ACTCTCTGATATTGCCTCCA+CGG | + | chr4.3:27364208-27364227 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | - | chr4.3:27365985-27366004 | MS.gene56071:CDS | 45.0% | |
| ATCCAACCAATGAGACCTCT+AGG | + | chr4.3:27365179-27365198 | None:intergenic | 45.0% | |
| ATTTAGACCCTGTGACTCGA+GGG | + | chr4.3:27364311-27364330 | None:intergenic | 45.0% | |
| CACCATTGTTTATACCGCGT+TGG | - | chr4.3:27365941-27365960 | MS.gene56071:CDS | 45.0% | |
| CATGACTCAGACGGTTCAAT+CGG | - | chr4.3:27365066-27365085 | MS.gene56071:intron | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | - | chr4.3:27365841-27365860 | MS.gene56071:CDS | 45.0% | |
| CATTTGCCTTACACACGCAA+TGG | - | chr4.3:27364557-27364576 | MS.gene56071:intron | 45.0% | |
| CCCTTATGTTCTTGTCACCA+TGG | - | chr4.3:27361430-27361449 | MS.gene56071:intron | 45.0% | |
| CCGTAAACAGGGTCAATTCA+TGG | + | chr4.3:27365097-27365116 | None:intergenic | 45.0% | |
| CGACAAAGACACTTTCACTG+TGG | - | chr4.3:27362556-27362575 | MS.gene56071:intron | 45.0% | |
| CTCAGTTCCCTTTGATCCTA+TGG | + | chr4.3:27362249-27362268 | None:intergenic | 45.0% | |
| GACAAGTCAGACAGAAGAGA+AGG | - | chr4.3:27363020-27363039 | MS.gene56071:CDS | 45.0% | |
| GACACCCTAACATTCTCAAG+AGG | + | chr4.3:27364276-27364295 | None:intergenic | 45.0% | |
| GATACCGATGTTGACAGAAG+CGG | - | chr4.3:27365767-27365786 | MS.gene56071:intron | 45.0% | |
| GCTAGGCAATTAGTCGTATC+TGG | + | chr4.3:27362686-27362705 | None:intergenic | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | - | chr4.3:27365986-27366005 | MS.gene56071:CDS | 45.0% | |
| GGATGTTAGAGGAGTTGCAT+TGG | - | chr4.3:27364143-27364162 | MS.gene56071:intron | 45.0% | |
| GTCTTGACTACATGTCCATC+TGG | + | chr4.3:27362656-27362675 | None:intergenic | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | - | chr4.3:27366671-27366690 | MS.gene56071:intron | 45.0% | |
| GTGCTTATAAATAGAGGCGG+AGG | + | chr4.3:27366778-27366797 | None:intergenic | 45.0% | |
| GTTACAGAATCCGAAGGCAA+AGG | - | chr4.3:27362815-27362834 | MS.gene56071:CDS | 45.0% | |
| GTTAGAGGAGTTGCATTGGA+AGG | - | chr4.3:27364147-27364166 | MS.gene56071:intron | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | - | chr4.3:27365676-27365695 | MS.gene56071:intron | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | - | chr4.3:27366629-27366648 | MS.gene56071:intron | 45.0% | |
| TAGGAGGCTTCAGAATGGTT+CGG | - | chr4.3:27364122-27364141 | MS.gene56071:intron | 45.0% | |
| TCAACCCCATCTTCACACAT+TGG | + | chr4.3:27362625-27362644 | None:intergenic | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | - | chr4.3:27367063-27367082 | MS.gene56071:intron | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | + | chr4.3:27365677-27365696 | None:intergenic | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | + | chr4.3:27365872-27365891 | None:intergenic | 45.0% | |
| TCTGAGTAGTAGACGCTTGT+TGG | + | chr4.3:27363313-27363332 | None:intergenic | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | + | chr4.3:27365958-27365977 | None:intergenic | 45.0% | |
| TGCTAAAGCAAAAGGATCGG+AGG | - | chr4.3:27366349-27366368 | MS.gene56071:intron | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | + | chr4.3:27366719-27366738 | None:intergenic | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | - | chr4.3:27367049-27367068 | MS.gene56071:intron | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | - | chr4.3:27366245-27366264 | MS.gene56071:intron | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | - | chr4.3:27366246-27366265 | MS.gene56071:intron | 45.0% |
| ! | CAGAATGGTTCGGATGTTAG+AGG | - | chr4.3:27364132-27364151 | MS.gene56071:intron | 45.0% |
| ! | GAGAATGTTAGGGTGTCTCT+TGG | - | chr4.3:27364279-27364298 | MS.gene56071:CDS | 45.0% |
| ! | GAGCGATCACAGTTTCGTTT+TGG | - | chr4.3:27365128-27365147 | MS.gene56071:intron | 45.0% |
| ! | GCAATTTTGTCCTCGGGATT+GGG | + | chr4.3:27365689-27365708 | None:intergenic | 45.0% |
| ! | GGTCTCATTGGTTGGATGTT+CGG | - | chr4.3:27365182-27365201 | MS.gene56071:intron | 45.0% |
| ! | GTAGACTCTCGCCAAGTTTT+TGG | + | chr4.3:27362191-27362210 | None:intergenic | 45.0% |
| ! | GTGCAGGCATTGCTAATTCA+TGG | + | chr4.3:27364982-27365001 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | + | chr4.3:27365696-27365715 | None:intergenic | 45.0% |
| ! | TTGAGTGTTGCAGTGTTTGC+CGG | - | chr4.3:27364330-27364349 | MS.gene56071:CDS | 45.0% |
| !! | AAGCTTGGTGCAGATACCTT+TGG | - | chr4.3:27365620-27365639 | MS.gene56071:intron | 45.0% |
| !! | TCTCCACTGACTCATAGAGA+AGG | - | chr4.3:27365243-27365262 | MS.gene56071:intron | 45.0% |
| !! | TGTACGAGCATCGGTTACTA+TGG | + | chr4.3:27365882-27365901 | None:intergenic | 45.0% |
| !! | TTTGGGGAGTGGGTTATCAA+TGG | - | chr4.3:27364228-27364247 | MS.gene56071:CDS | 45.0% |
| !!! | ATCAGAGAGTTTTGGGGAGT+GGG | - | chr4.3:27364218-27364237 | MS.gene56071:CDS | 45.0% |
| !!! | TATCAGAGAGTTTTGGGGAG+TGG | - | chr4.3:27364217-27364236 | MS.gene56071:CDS | 45.0% |
| AATGCTGGAAACGGTTCAGG+AGG | - | chr4.3:27365572-27365591 | MS.gene56071:intron | 50.0% | |
| ACTGACACTAGCCACAAGCA+TGG | - | chr4.3:27363574-27363593 | MS.gene56071:intron | 50.0% | |
| AGTAGCTGCGTATGGAGAGA+TGG | - | chr4.3:27362713-27362732 | MS.gene56071:CDS | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | - | chr4.3:27366620-27366639 | MS.gene56071:intron | 50.0% | |
| CCATACGCAGCTACTCTCTT+CGG | + | chr4.3:27362708-27362727 | None:intergenic | 50.0% | |
| CGACATGCTTGTACGAGCAT+CGG | + | chr4.3:27365891-27365910 | None:intergenic | 50.0% | |
| CGATTGAACCGTCTGAGTCA+TGG | + | chr4.3:27365068-27365087 | None:intergenic | 50.0% | |
| CTCAGACCAACAAGCGTCTA+CGG | - | chr4.3:27363304-27363323 | MS.gene56071:intron | 50.0% | |
| CTCGGATAAGCCTTTGCCTT+CGG | + | chr4.3:27362828-27362847 | None:intergenic | 50.0% | |
| GACAAGAACATAAGGGTCGC+TGG | + | chr4.3:27361426-27361445 | None:intergenic | 50.0% | |
| GACCTAGAGGTCTCATTGGT+TGG | - | chr4.3:27365174-27365193 | MS.gene56071:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | - | chr4.3:27366670-27366689 | MS.gene56071:intron | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | - | chr4.3:27366251-27366270 | MS.gene56071:intron | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | - | chr4.3:27366628-27366647 | MS.gene56071:intron | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | - | chr4.3:27365569-27365588 | MS.gene56071:intron | 50.0% | |
| GTTGCATTGGAAGGCGAGAA+AGG | - | chr4.3:27364156-27364175 | MS.gene56071:CDS | 50.0% | |
| TAATGAAGGGGCCTACATGG+TGG | - | chr4.3:27366193-27366212 | MS.gene56071:intron | 50.0% | |
| TCCCGAGGACAAAATTGCCA+TGG | - | chr4.3:27365691-27365710 | MS.gene56071:intron | 50.0% | |
| TCGCTGGTACGAGAATCATG+AGG | + | chr4.3:27361410-27361429 | None:intergenic | 50.0% | |
| TCTGTGTGCACCCTTCATCT+AGG | + | chr4.3:27362454-27362473 | None:intergenic | 50.0% | |
| ! | CACTTTCGTTCCGGTTCTAG+TGG | - | chr4.3:27365027-27365046 | MS.gene56071:intron | 50.0% |
| ! | GCCATGGCAATTTTGTCCTC+GGG | + | chr4.3:27365695-27365714 | None:intergenic | 50.0% |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | + | chr4.3:27365690-27365709 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | - | chr4.3:27365785-27365804 | MS.gene56071:intron | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | - | chr4.3:27365786-27365805 | MS.gene56071:intron | 50.0% |
| !! | TCTTGCTCGTGCTGGTTGTA+TGG | - | chr4.3:27364353-27364372 | MS.gene56071:CDS | 50.0% |
| ACAACCAGCACGAGCAAGAC+CGG | + | chr4.3:27364352-27364371 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | - | chr4.3:27366632-27366651 | MS.gene56071:intron | 55.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | + | chr4.3:27365774-27365793 | None:intergenic | 55.0% | |
| CCGAAGAGAGTAGCTGCGTA+TGG | - | chr4.3:27362705-27362724 | MS.gene56071:CDS | 55.0% | |
| CGAAGGCAAAGGCTTATCCG+AGG | - | chr4.3:27362826-27362845 | MS.gene56071:CDS | 55.0% | |
| CGTAGACCGTAGACGCTTGT+TGG | + | chr4.3:27363336-27363355 | None:intergenic | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | - | chr4.3:27366633-27366652 | MS.gene56071:intron | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | - | chr4.3:27366649-27366668 | MS.gene56071:intron | 55.0% | |
| GTTCGGTCGCACTTTCGTTC+CGG | - | chr4.3:27365018-27365037 | MS.gene56071:intron | 55.0% | |
| TCTGATATTGCCTCCACGGC+AGG | + | chr4.3:27364204-27364223 | None:intergenic | 55.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | - | chr4.3:27365772-27365791 | MS.gene56071:intron | 60.0% | |
| CGCAGCTACTCTCTTCGGCT+AGG | + | chr4.3:27362703-27362722 | None:intergenic | 60.0% | |
| GATATTGCCTCCACGGCAGG+AGG | + | chr4.3:27364201-27364220 | None:intergenic | 60.0% | |
| GGGTTGAGCGATCTCCCAGA+TGG | - | chr4.3:27362638-27362657 | MS.gene56071:CDS | 60.0% | |
| TTTGCCGGTCTTGCTCGTGC+TGG | - | chr4.3:27364345-27364364 | MS.gene56071:CDS | 60.0% | |
| CCTCCACGGCAGGAGGAGTA+AGG | + | chr4.3:27364194-27364213 | None:intergenic | 65.0% | |
| CCTTACTCCTCCTGCCGTGG+AGG | - | chr4.3:27364191-27364210 | MS.gene56071:CDS | 65.0% | |
| CGACCTTACTCCTCCTGCCG+TGG | - | chr4.3:27364188-27364207 | MS.gene56071:CDS | 65.0% | |
| GACGCGACCCTCGAGTCACA+GGG | - | chr4.3:27364301-27364320 | MS.gene56071:CDS | 65.0% | |
| ! | AGGGGGGCTGACTTCACTGG+AGG | - | chr4.3:27364601-27364620 | MS.gene56071:intron | 65.0% |
| ! | GAGAGGGGGGCTGACTTCAC+TGG | - | chr4.3:27364598-27364617 | MS.gene56071:intron | 65.0% |
| GGACGCGACCCTCGAGTCAC+AGG | - | chr4.3:27364300-27364319 | MS.gene56071:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 27361350 | 27367287 | 27361350 | ID=MS.gene56071 |
| chr4.3 | mRNA | 27361350 | 27367287 | 27361350 | ID=MS.gene56071.t1;Parent=MS.gene56071 |
| chr4.3 | exon | 27367177 | 27367287 | 27367177 | ID=MS.gene56071.t1.exon1;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27367177 | 27367287 | 27367177 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27366844 | 27366939 | 27366844 | ID=MS.gene56071.t1.exon2;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27366844 | 27366939 | 27366844 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27365790 | 27366089 | 27365790 | ID=MS.gene56071.t1.exon3;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27365790 | 27366089 | 27365790 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27364149 | 27364553 | 27364149 | ID=MS.gene56071.t1.exon4;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27364149 | 27364553 | 27364149 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27363829 | 27364092 | 27363829 | ID=MS.gene56071.t1.exon5;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27363829 | 27364092 | 27363829 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27362558 | 27363074 | 27362558 | ID=MS.gene56071.t1.exon6;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27362558 | 27363074 | 27362558 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27362237 | 27362436 | 27362237 | ID=MS.gene56071.t1.exon7;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27362237 | 27362436 | 27362237 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27361891 | 27362003 | 27361891 | ID=MS.gene56071.t1.exon8;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27361891 | 27362003 | 27361891 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27361533 | 27361673 | 27361533 | ID=MS.gene56071.t1.exon9;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27361533 | 27361673 | 27361533 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| chr4.3 | exon | 27361350 | 27361431 | 27361350 | ID=MS.gene56071.t1.exon10;Parent=MS.gene56071.t1 |
| chr4.3 | CDS | 27361350 | 27361431 | 27361350 | ID=cds.MS.gene56071.t1;Parent=MS.gene56071.t1 |
| Gene Sequence |
| Protein sequence |
