Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56072.t1 | XP_003607905.1 | 92.5 | 577 | 15 | 2 | 166 | 724 | 55 | 621 | 6.20E-306 | 1059.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56072.t1 | Q9SSL1 | 55.5 | 164 | 73 | 0 | 1 | 164 | 1 | 164 | 5.3e-48 | 194.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56072.t1 | G7JJZ2 | 92.5 | 577 | 15 | 2 | 166 | 724 | 55 | 621 | 4.4e-306 | 1059.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050133 | MS.gene56072 | -0.808296 | 3.32E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene56072 | -0.836928 | 7.02E-57 | -1.69E-46 |
| MS.gene051208 | MS.gene56072 | 0.842491 | 2.50E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene56072 | 0.805516 | 1.29E-49 | -1.69E-46 |
| MS.gene051552 | MS.gene56072 | -0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene56072 | -0.814348 | 1.61E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene56072 | 0.825588 | 4.32E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene56072 | 0.807638 | 4.58E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene56072 | 0.814292 | 1.66E-51 | -1.69E-46 |
| MS.gene052589 | MS.gene56072 | 0.852873 | 3.47E-61 | -1.69E-46 |
| MS.gene052590 | MS.gene56072 | 0.831927 | 1.26E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene56072 | 0.878613 | 2.44E-69 | -1.69E-46 |
| MS.gene054102 | MS.gene56072 | 0.814523 | 1.48E-51 | -1.69E-46 |
| MS.gene054110 | MS.gene56072 | 0.829002 | 6.57E-55 | -1.69E-46 |
| MS.gene054719 | MS.gene56072 | 0.804389 | 2.21E-49 | -1.69E-46 |
| MS.gene054810 | MS.gene56072 | -0.802513 | 5.41E-49 | -1.69E-46 |
| MS.gene055370 | MS.gene56072 | 0.851775 | 7.12E-61 | -1.69E-46 |
| MS.gene055488 | MS.gene56072 | -0.811989 | 5.31E-51 | -1.69E-46 |
| MS.gene055501 | MS.gene56072 | 0.821725 | 3.47E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene56072 | 0.832234 | 1.06E-55 | -1.69E-46 |
| MS.gene05569 | MS.gene56072 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene056305 | MS.gene56072 | 0.808674 | 2.76E-50 | -1.69E-46 |
| MS.gene056351 | MS.gene56072 | 0.851404 | 9.08E-61 | -1.69E-46 |
| MS.gene056442 | MS.gene56072 | 0.806258 | 8.98E-50 | -1.69E-46 |
| MS.gene056633 | MS.gene56072 | 0.866246 | 3.28E-65 | -1.69E-46 |
| MS.gene058746 | MS.gene56072 | 0.861113 | 1.29E-63 | -1.69E-46 |
| MS.gene059512 | MS.gene56072 | 0.903223 | 4.33E-79 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56072 | MS.gene54796 | PPI |
| MS.gene56072 | MS.gene49437 | PPI |
| MS.gene34039 | MS.gene56072 | PPI |
| MS.gene56072 | MS.gene005970 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56072.t1 | MTR_4g084270 | 92.548 | 577 | 15 | 2 | 166 | 724 | 55 | 621 | 0.0 | 1090 |
| MS.gene56072.t1 | MTR_1g094980 | 39.859 | 567 | 268 | 14 | 182 | 718 | 18 | 541 | 3.91e-116 | 360 |
| MS.gene56072.t1 | MTR_4g084280 | 96.491 | 171 | 6 | 0 | 1 | 171 | 1 | 171 | 6.31e-115 | 343 |
| MS.gene56072.t1 | MTR_1g094980 | 39.859 | 567 | 268 | 14 | 182 | 718 | 90 | 613 | 6.80e-115 | 359 |
| MS.gene56072.t1 | MTR_1g031650 | 66.871 | 163 | 53 | 1 | 3 | 164 | 4 | 166 | 1.01e-70 | 228 |
| MS.gene56072.t1 | MTR_1g031650 | 69.531 | 128 | 39 | 0 | 37 | 164 | 2 | 129 | 1.90e-58 | 194 |
| MS.gene56072.t1 | MTR_3g067585 | 54.601 | 163 | 74 | 0 | 1 | 163 | 1 | 163 | 7.58e-58 | 194 |
| MS.gene56072.t1 | MTR_8g107340 | 51.220 | 164 | 80 | 0 | 1 | 164 | 17 | 180 | 1.43e-52 | 180 |
| MS.gene56072.t1 | MTR_2g011590 | 51.235 | 162 | 79 | 0 | 3 | 164 | 2 | 163 | 1.32e-51 | 177 |
| MS.gene56072.t1 | MTR_6g069470 | 49.390 | 164 | 83 | 0 | 1 | 164 | 13 | 176 | 6.52e-50 | 172 |
| MS.gene56072.t1 | MTR_8g088320 | 40.000 | 160 | 95 | 1 | 1 | 159 | 161 | 320 | 2.34e-31 | 125 |
| MS.gene56072.t1 | MTR_2g030230 | 38.889 | 162 | 94 | 3 | 1 | 159 | 168 | 327 | 1.47e-28 | 117 |
| MS.gene56072.t1 | MTR_3g017500 | 37.952 | 166 | 94 | 2 | 1 | 161 | 209 | 370 | 3.40e-27 | 114 |
| MS.gene56072.t1 | MTR_8g038400 | 37.654 | 162 | 100 | 1 | 1 | 161 | 206 | 367 | 4.14e-27 | 114 |
| MS.gene56072.t1 | MTR_3g017500 | 38.889 | 162 | 98 | 1 | 1 | 161 | 239 | 400 | 8.01e-27 | 114 |
| MS.gene56072.t1 | MTR_2g027100 | 38.158 | 152 | 92 | 2 | 1 | 150 | 1 | 152 | 4.00e-26 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56072.t1 | AT1G70820 | 74.869 | 573 | 109 | 5 | 167 | 718 | 53 | 611 | 0.0 | 885 |
| MS.gene56072.t1 | AT1G70820 | 75.725 | 552 | 99 | 5 | 167 | 697 | 53 | 590 | 0.0 | 861 |
| MS.gene56072.t1 | AT5G17530 | 40.706 | 538 | 248 | 13 | 179 | 685 | 13 | 510 | 3.87e-113 | 352 |
| MS.gene56072.t1 | AT5G17530 | 40.706 | 538 | 248 | 13 | 179 | 685 | 52 | 549 | 2.77e-112 | 352 |
| MS.gene56072.t1 | AT5G17530 | 40.706 | 538 | 248 | 13 | 179 | 685 | 52 | 549 | 2.77e-112 | 352 |
| MS.gene56072.t1 | AT5G17530 | 40.706 | 538 | 248 | 13 | 179 | 685 | 52 | 549 | 2.77e-112 | 352 |
| MS.gene56072.t1 | AT5G17530 | 40.706 | 538 | 248 | 13 | 179 | 685 | 52 | 549 | 2.77e-112 | 352 |
| MS.gene56072.t1 | AT5G17530 | 40.706 | 538 | 248 | 13 | 179 | 685 | 85 | 582 | 7.41e-112 | 352 |
| MS.gene56072.t1 | AT5G17530 | 41.011 | 534 | 244 | 13 | 179 | 681 | 85 | 578 | 6.28e-111 | 350 |
| MS.gene56072.t1 | AT1G70810 | 55.488 | 164 | 73 | 0 | 1 | 164 | 1 | 164 | 3.02e-57 | 192 |
| MS.gene56072.t1 | AT1G48590 | 55.090 | 167 | 72 | 1 | 1 | 167 | 37 | 200 | 8.39e-56 | 189 |
| MS.gene56072.t1 | AT1G48590 | 55.090 | 167 | 72 | 1 | 1 | 167 | 6 | 169 | 1.02e-55 | 188 |
| MS.gene56072.t1 | AT1G48590 | 55.090 | 167 | 72 | 1 | 1 | 167 | 6 | 169 | 1.02e-55 | 188 |
| MS.gene56072.t1 | AT1G70790 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 5.71e-54 | 184 |
| MS.gene56072.t1 | AT1G70790 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 5.71e-54 | 184 |
| MS.gene56072.t1 | AT1G70790 | 53.659 | 164 | 74 | 1 | 5 | 166 | 6 | 169 | 5.71e-54 | 184 |
| MS.gene56072.t1 | AT3G17980 | 51.829 | 164 | 79 | 0 | 1 | 164 | 13 | 176 | 5.74e-53 | 181 |
| MS.gene56072.t1 | AT1G23140 | 51.852 | 162 | 78 | 0 | 1 | 162 | 1 | 162 | 2.83e-52 | 179 |
| MS.gene56072.t1 | AT2G01540 | 55.195 | 154 | 67 | 1 | 5 | 156 | 6 | 159 | 2.85e-52 | 179 |
| MS.gene56072.t1 | AT1G73580 | 48.780 | 164 | 84 | 0 | 1 | 164 | 4 | 167 | 4.44e-52 | 178 |
| MS.gene56072.t1 | AT1G70800 | 50.955 | 157 | 77 | 0 | 1 | 157 | 10 | 166 | 5.73e-50 | 172 |
| MS.gene56072.t1 | AT1G66360 | 47.531 | 162 | 83 | 1 | 1 | 160 | 1 | 162 | 1.73e-47 | 166 |
| MS.gene56072.t1 | AT5G37740 | 46.707 | 167 | 86 | 1 | 1 | 164 | 1 | 167 | 3.65e-46 | 162 |
| MS.gene56072.t1 | AT5G37740 | 44.068 | 177 | 86 | 2 | 1 | 164 | 1 | 177 | 7.43e-43 | 153 |
| MS.gene56072.t1 | AT1G70790 | 55.385 | 130 | 56 | 1 | 39 | 166 | 3 | 132 | 1.75e-41 | 148 |
| MS.gene56072.t1 | AT1G48590 | 45.509 | 167 | 56 | 2 | 1 | 167 | 37 | 168 | 8.07e-39 | 142 |
| MS.gene56072.t1 | AT4G05330 | 41.875 | 160 | 88 | 3 | 1 | 157 | 140 | 297 | 1.21e-30 | 122 |
| MS.gene56072.t1 | AT4G05330 | 40.854 | 164 | 92 | 3 | 1 | 161 | 175 | 336 | 3.35e-30 | 122 |
| MS.gene56072.t1 | AT4G05330 | 40.854 | 164 | 92 | 3 | 1 | 161 | 175 | 336 | 3.35e-30 | 122 |
| MS.gene56072.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 3.58e-30 | 122 |
| MS.gene56072.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 3.58e-30 | 122 |
| MS.gene56072.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 3.58e-30 | 122 |
| MS.gene56072.t1 | AT4G21160 | 40.854 | 164 | 92 | 3 | 1 | 161 | 176 | 337 | 3.58e-30 | 122 |
| MS.gene56072.t1 | AT3G07940 | 39.506 | 162 | 97 | 1 | 1 | 161 | 224 | 385 | 8.97e-29 | 119 |
| MS.gene56072.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.52e-28 | 111 |
| MS.gene56072.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.52e-28 | 111 |
| MS.gene56072.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.52e-28 | 111 |
| MS.gene56072.t1 | AT5G47710 | 37.126 | 167 | 89 | 2 | 1 | 158 | 1 | 160 | 4.52e-28 | 111 |
Find 171 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATAAGTTTGTTGAAAA+TGG | 0.159254 | 4.4:+28120334 | MS.gene56072:CDS |
| AACTCCACTTAAGGGATTTC+AGG | 0.200454 | 4.4:+28117869 | MS.gene56072:CDS |
| TCAATCTTAAACTCATTTCT+TGG | 0.237962 | 4.4:-28115827 | None:intergenic |
| TCTCCTTGATGATTTCTCTT+AGG | 0.241263 | 4.4:-28117821 | None:intergenic |
| GTACAGGAAGGGAGGCTTAA+AGG | 0.243975 | 4.4:+28119709 | MS.gene56072:intron |
| TTTCACTGTGGACGACAAAA+TGG | 0.248123 | 4.4:+28115650 | MS.gene56072:CDS |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4.4:-28118893 | None:intergenic |
| GATATCCTCTTGAGAATGTT+AGG | 0.280295 | 4.4:+28117350 | MS.gene56072:CDS |
| GTCAGTTCTTCATTCCATTC+AGG | 0.282274 | 4.4:-28114816 | None:intergenic |
| GAGGCAATATCAGAGAGTTT+TGG | 0.300966 | 4.4:+28117292 | MS.gene56072:CDS |
| ATCTTCACACATTGGAGATA+TGG | 0.313339 | 4.4:-28115696 | None:intergenic |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4.4:-28119048 | None:intergenic |
| TGCAAGTTCACAGCAATGTT+TGG | 0.318198 | 4.4:-28120113 | None:intergenic |
| TGGTTGTATGGTGTTTGATA+TGG | 0.318441 | 4.4:+28117447 | MS.gene56072:CDS |
| AATGGTTTAGAGAAGGAAAA+AGG | 0.330346 | 4.4:+28117328 | MS.gene56072:CDS |
| GCATTATGAAACTCCACTTA+AGG | 0.337071 | 4.4:+28117860 | MS.gene56072:CDS |
| TGCTTTAGCATTTCGAGGTT+CGG | 0.347623 | 4.4:-28119417 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4.4:+28118815 | MS.gene56072:CDS |
| GTTTCGATGGCAAACATTCT+AGG | 0.356912 | 4.4:+28114426 | None:intergenic |
| GCTAGGCAATTAGTCGTATC+TGG | 0.362744 | 4.4:-28115765 | None:intergenic |
| CATTATGAAACTCCACTTAA+GGG | 0.365922 | 4.4:+28117861 | MS.gene56072:CDS |
| TGTCTATGATGCTTCAATAA+TGG | 0.374026 | 4.4:+28117519 | MS.gene56072:CDS |
| GTCTTGACTACATGTCCATC+TGG | 0.383427 | 4.4:-28115735 | None:intergenic |
| TTCAAACCATTGCGTGTGTA+AGG | 0.384986 | 4.4:-28117645 | None:intergenic |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4.4:+28118651 | MS.gene56072:CDS |
| CTCGGATAAGCCTTTGCCTT+CGG | 0.389439 | 4.4:-28115907 | None:intergenic |
| ATGAAGAATTGGACAAGATT+AGG | 0.394518 | 4.4:+28117185 | MS.gene56072:CDS |
| GCAAGTTCACAGCAATGTTT+GGG | 0.402997 | 4.4:-28120112 | None:intergenic |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4.4:+28119139 | MS.gene56072:CDS |
| TGTACGAGCATCGGTTACTA+TGG | 0.406310 | 4.4:-28118960 | None:intergenic |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4.4:+28119740 | MS.gene56072:CDS |
| TTTGGGGAGTGGGTTATCAA+TGG | 0.408829 | 4.4:+28117310 | MS.gene56072:CDS |
| GGTTGTATGGTGTTTGATAT+GGG | 0.413997 | 4.4:+28117448 | MS.gene56072:CDS |
| TACAGGAAGGGAGGCTTAAA+GGG | 0.417177 | 4.4:+28119710 | MS.gene56072:intron |
| CATGGCTGCCATTGTATTGA+AGG | 0.421469 | 4.4:+28118922 | MS.gene56072:CDS |
| TTGAGTGTTGCAGTGTTTGC+CGG | 0.424973 | 4.4:+28117412 | MS.gene56072:CDS |
| TCTTGCTCGTGCTGGTTGTA+TGG | 0.433556 | 4.4:+28117435 | MS.gene56072:CDS |
| CAGAATGGTTCGGATGTTAG+AGG | 0.441225 | 4.4:+28117214 | MS.gene56072:CDS |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4.4:+28118702 | MS.gene56072:CDS |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4.4:-28119144 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4.4:-28119380 | None:intergenic |
| AGTAGTGGTGGATGAAGAAT+TGG | 0.460522 | 4.4:+28117174 | MS.gene56072:CDS |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4.4:-28118950 | None:intergenic |
| TCCATGGTGACAAGAACATA+AGG | 0.466228 | 4.4:-28114513 | None:intergenic |
| CAAACCTGAAATCCCTTAAG+TGG | 0.467227 | 4.4:-28117873 | None:intergenic |
| TTTGCCGGTCTTGCTCGTGC+TGG | 0.468617 | 4.4:+28117427 | MS.gene56072:CDS |
| GGACGCGACCCTCGAGTCAC+AGG | 0.474920 | 4.4:+28117382 | MS.gene56072:CDS |
| GTTGCATTGGAAGGCGAGAA+AGG | 0.478585 | 4.4:+28117238 | MS.gene56072:CDS |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4.4:+28118881 | MS.gene56072:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4.4:-28118741 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4.4:+28119741 | MS.gene56072:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4.4:+28119100 | MS.gene56072:CDS |
| CCATACGCAGCTACTCTCTT+CGG | 0.489124 | 4.4:-28115787 | None:intergenic |
| CCTCGAAATGCTAAAGCAAA+AGG | 0.489207 | 4.4:+28119422 | MS.gene56072:CDS |
| CCTCCACGGCAGGAGGAGTA+AGG | 0.491033 | 4.4:-28117273 | None:intergenic |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4.4:+28119295 | MS.gene56072:CDS |
| CTAACTAACTTGTTCTTCCA+TGG | 0.492512 | 4.4:-28114529 | None:intergenic |
| AGTAGCTGCGTATGGAGAGA+TGG | 0.493455 | 4.4:+28115795 | MS.gene56072:CDS |
| TCTGATATTGCCTCCACGGC+AGG | 0.494254 | 4.4:-28117283 | None:intergenic |
| ACTAAGTTTATAACTGATAG+AGG | 0.494389 | 4.4:+28118995 | MS.gene56072:CDS |
| AAGATAACTGCCATCCTGAA+TGG | 0.495110 | 4.4:+28114802 | MS.gene56072:CDS |
| CTTATGAATCAGTAGAACTT+AGG | 0.496088 | 4.4:+28119381 | MS.gene56072:CDS |
| TATCAATTTGAGCAATGTCT+AGG | 0.498567 | 4.4:-28120318 | None:intergenic |
| TAGGAGGCTTCAGAATGGTT+CGG | 0.500282 | 4.4:+28117204 | MS.gene56072:CDS |
| TGTTAACACACCAATACATC+TGG | 0.500731 | 4.4:+28114854 | MS.gene56072:CDS |
| TTCACTGTGGACGACAAAAT+GGG | 0.505157 | 4.4:+28115651 | MS.gene56072:CDS |
| ATATCTCCAATGTGTGAAGA+TGG | 0.506001 | 4.4:+28115698 | MS.gene56072:CDS |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4.4:+28119752 | MS.gene56072:CDS |
| TCAAGGAGGTTGCTTGTCAA+TGG | 0.508461 | 4.4:+28120145 | MS.gene56072:CDS |
| TGAACATGGACAACATGGTT+GGG | 0.514106 | 4.4:+28120064 | MS.gene56072:CDS |
| ATGAACATGGACAACATGGT+TGG | 0.518204 | 4.4:+28120063 | MS.gene56072:CDS |
| GAGAATGTTAGGGTGTCTCT+TGG | 0.518716 | 4.4:+28117361 | MS.gene56072:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4.4:+28119326 | MS.gene56072:CDS |
| ATTGAAGCATCATAGACAAA+TGG | 0.520839 | 4.4:-28117514 | None:intergenic |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4.4:+28118639 | MS.gene56072:intron |
| TCGTAAATATGCAAATAGAT+TGG | 0.522642 | 4.4:+28117731 | MS.gene56072:CDS |
| ATATTGATGCTCAAATGTAC+AGG | 0.524473 | 4.4:+28119806 | MS.gene56072:CDS |
| TGACAAACTCATTGCTCTCA+TGG | 0.524707 | 4.4:+28118904 | MS.gene56072:CDS |
| TGAGTACTGACCAGATGTAT+TGG | 0.524936 | 4.4:-28114864 | None:intergenic |
| TATCTCCAATGTGTGAAGAT+GGG | 0.525049 | 4.4:+28115699 | MS.gene56072:CDS |
| ATATAATGAAGGGGCCTACA+TGG | 0.525333 | 4.4:+28119271 | MS.gene56072:intron |
| TTTGAGCATCAATATGAGCC+GGG | 0.527926 | 4.4:-28119798 | None:intergenic |
| CATATTGTAAATCAGGCTGA+TGG | 0.528700 | 4.4:-28120358 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4.4:+28119751 | MS.gene56072:CDS |
| CCGAAGAGAGTAGCTGCGTA+TGG | 0.539890 | 4.4:+28115787 | MS.gene56072:CDS |
| ATTTGAGCATCAATATGAGC+CGG | 0.540769 | 4.4:-28119799 | None:intergenic |
| ATATCCTCTTGAGAATGTTA+GGG | 0.543188 | 4.4:+28117351 | MS.gene56072:CDS |
| ACAACCAGCACGAGCAAGAC+CGG | 0.545469 | 4.4:-28117431 | None:intergenic |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4.4:+28118645 | MS.gene56072:CDS |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4.4:-28118718 | None:intergenic |
| ATTGTATTGAAGGAAAATCC+AGG | 0.558299 | 4.4:+28118932 | MS.gene56072:CDS |
| CACCATTGTTTATACCGCGT+TGG | 0.558868 | 4.4:+28119022 | MS.gene56072:CDS |
| AACAATGAACATGGACAACA+TGG | 0.562336 | 4.4:+28120059 | MS.gene56072:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4.4:-28119150 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4.4:+28119332 | MS.gene56072:CDS |
| CGACCTTACTCCTCCTGCCG+TGG | 0.566388 | 4.4:+28117270 | MS.gene56072:CDS |
| GGTTATCAATGGTTTAGAGA+AGG | 0.568136 | 4.4:+28117321 | MS.gene56072:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4.4:+28118687 | MS.gene56072:CDS |
| CATTTGCCTTACACACGCAA+TGG | 0.572460 | 4.4:+28117639 | MS.gene56072:CDS |
| GGATGTTAGAGGAGTTGCAT+TGG | 0.576031 | 4.4:+28117225 | MS.gene56072:CDS |
| ATGGTCGGTTACATAAAACT+TGG | 0.576767 | 4.4:+28117538 | MS.gene56072:CDS |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4.4:+28118867 | MS.gene56072:CDS |
| ATTTAGACCCTGTGACTCGA+GGG | 0.578792 | 4.4:-28117390 | None:intergenic |
| GACAAGAACATAAGGGTCGC+TGG | 0.578982 | 4.4:-28114505 | None:intergenic |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.582640 | 4.4:+28119063 | MS.gene56072:CDS |
| CCTTACTCCTCCTGCCGTGG+AGG | 0.582653 | 4.4:+28117273 | MS.gene56072:CDS |
| AACTTGCAATCATCTGCTCA+AGG | 0.583771 | 4.4:+28120128 | MS.gene56072:CDS |
| AGATTGAGAAATGTTGACTC+TGG | 0.584076 | 4.4:+28115843 | MS.gene56072:CDS |
| GTTAGAGGAGTTGCATTGGA+AGG | 0.585950 | 4.4:+28117229 | MS.gene56072:CDS |
| CCCTTATGTTCTTGTCACCA+TGG | 0.587591 | 4.4:+28114512 | MS.gene56072:CDS |
| CCATGGTGACAAGAACATAA+GGG | 0.590675 | 4.4:-28114512 | None:intergenic |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4.4:+28118726 | MS.gene56072:CDS |
| AGTGGAGTTTCATAATGCAA+AGG | 0.592830 | 4.4:-28117855 | None:intergenic |
| ATATTGTAAATCAGGCTGAT+GGG | 0.593285 | 4.4:-28120357 | None:intergenic |
| ATGTTGCTGTACAGGAAGGG+AGG | 0.593434 | 4.4:+28119701 | MS.gene56072:intron |
| AAGAATTGGACAAGATTAGG+AGG | 0.597154 | 4.4:+28117188 | MS.gene56072:CDS |
| GATATTGCCTCCACGGCAGG+AGG | 0.597822 | 4.4:-28117280 | None:intergenic |
| CGCAGCTACTCTCTTCGGCT+AGG | 0.597984 | 4.4:-28115782 | None:intergenic |
| AAGATTAGGAGGCTTCAGAA+TGG | 0.602089 | 4.4:+28117199 | MS.gene56072:CDS |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4.4:+28119314 | MS.gene56072:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4.4:+28119311 | MS.gene56072:CDS |
| ACTCTCTGATATTGCCTCCA+CGG | 0.605057 | 4.4:-28117287 | None:intergenic |
| GTTACAGAATCCGAAGGCAA+AGG | 0.605128 | 4.4:+28115897 | MS.gene56072:CDS |
| GGAAGGGAGGCTTAAAGGGT+GGG | 0.606977 | 4.4:+28119714 | MS.gene56072:intron |
| AAGTACTAGTCGAAATTGAG+TGG | 0.607422 | 4.4:+28115868 | MS.gene56072:CDS |
| GACGCGACCCTCGAGTCACA+GGG | 0.611240 | 4.4:+28117383 | MS.gene56072:CDS |
| TCTTGACTACATGTCCATCT+GGG | 0.611492 | 4.4:-28115734 | None:intergenic |
| GATACCGATGTTGACAGAAG+CGG | 0.611913 | 4.4:+28118848 | MS.gene56072:CDS |
| GGGTTGAGCGATCTCCCAGA+TGG | 0.612527 | 4.4:+28115720 | MS.gene56072:CDS |
| AATTTAGACCCTGTGACTCG+AGG | 0.613432 | 4.4:-28117391 | None:intergenic |
| AATGTGCTCATGAAACAAGC+GGG | 0.613902 | 4.4:-28117484 | None:intergenic |
| AAATGCTAAAGCAAAAGGAT+CGG | 0.620165 | 4.4:+28119427 | MS.gene56072:CDS |
| GAAGCATCATAGACAAATGG+AGG | 0.622415 | 4.4:-28117511 | None:intergenic |
| TGCTAAAGCAAAAGGATCGG+AGG | 0.622933 | 4.4:+28119430 | MS.gene56072:CDS |
| GGAGTTCAGCTTAACAAGGA+GGG | 0.622995 | 4.4:+28119067 | MS.gene56072:CDS |
| CAATGTGCTCATGAAACAAG+CGG | 0.623267 | 4.4:-28117485 | None:intergenic |
| GACACCCTAACATTCTCAAG+AGG | 0.625174 | 4.4:-28117355 | None:intergenic |
| CGACATGCTTGTACGAGCAT+CGG | 0.627032 | 4.4:-28118969 | None:intergenic |
| GTTCTTCATTCCATTCAGGA+TGG | 0.627122 | 4.4:-28114812 | None:intergenic |
| AGGAAGGGAGGCTTAAAGGG+TGG | 0.627499 | 4.4:+28119713 | MS.gene56072:intron |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4.4:+28118866 | MS.gene56072:CDS |
| TATGATGCTTCAATAATGGT+CGG | 0.628222 | 4.4:+28117523 | MS.gene56072:CDS |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4.4:+28119327 | MS.gene56072:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4.4:+28118654 | MS.gene56072:CDS |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4.4:+28119046 | MS.gene56072:CDS |
| ATCTCCAATGTGTGAAGATG+GGG | 0.633945 | 4.4:+28115700 | MS.gene56072:CDS |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4.4:+28119106 | MS.gene56072:CDS |
| TGCAAAGTATGATGAAGTAG+TGG | 0.641435 | 4.4:+28117159 | MS.gene56072:intron |
| AACATGGTTGGGTACACATG+AGG | 0.643450 | 4.4:+28120075 | MS.gene56072:CDS |
| AAAGTATCAAACAATGAACA+TGG | 0.643511 | 4.4:+28120050 | MS.gene56072:CDS |
| GCACCTAAGAGAAATCATCA+AGG | 0.645515 | 4.4:+28117818 | MS.gene56072:CDS |
| AACCAACGCGGTATAAACAA+TGG | 0.648208 | 4.4:-28119024 | None:intergenic |
| TTTAAGCAGAGTAGACACTC+TGG | 0.648407 | 4.4:-28117754 | None:intergenic |
| TCAACCCCATCTTCACACAT+TGG | 0.658196 | 4.4:-28115704 | None:intergenic |
| CGACAAAGACACTTTCACTG+TGG | 0.661032 | 4.4:+28115638 | MS.gene56072:CDS |
| GGGTGGGAGTTAGACTCATG+TGG | 0.663424 | 4.4:+28119730 | MS.gene56072:CDS |
| GGGTGTCATTTGTATCAACA+AGG | 0.663565 | 4.4:-28119777 | None:intergenic |
| AGGAGTTCAGCTTAACAAGG+AGG | 0.668823 | 4.4:+28119066 | MS.gene56072:CDS |
| CGATGTTGACAGAAGCGGCG+TGG | 0.670101 | 4.4:+28118853 | MS.gene56072:CDS |
| TTGAGCATCAATATGAGCCG+GGG | 0.674597 | 4.4:-28119797 | None:intergenic |
| TAATGAAGGGGCCTACATGG+TGG | 0.680927 | 4.4:+28119274 | MS.gene56072:intron |
| TGTTGATACAAATGACACCC+CGG | 0.681662 | 4.4:+28119780 | MS.gene56072:CDS |
| ATTGATGTTACAGAATCCGA+AGG | 0.687927 | 4.4:+28115891 | MS.gene56072:CDS |
| AAAGTATGATGAAGTAGTGG+TGG | 0.692926 | 4.4:+28117162 | MS.gene56072:intron |
| CGAAGGCAAAGGCTTATCCG+AGG | 0.695987 | 4.4:+28115908 | MS.gene56072:CDS |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4.4:+28118998 | MS.gene56072:CDS |
| TTGCAATCATCTGCTCAAGG+AGG | 0.704569 | 4.4:+28120131 | MS.gene56072:CDS |
| TGACATTTCGGTAACCAACG+CGG | 0.705467 | 4.4:-28119036 | None:intergenic |
| CACGCCGCTTCTGTCAACAT+CGG | 0.714678 | 4.4:-28118852 | None:intergenic |
| TCGCTGGTACGAGAATCATG+AGG | 0.744769 | 4.4:-28114489 | None:intergenic |
| AACATTTCGAAACTACATCG+AGG | 0.755001 | 4.4:+28119460 | MS.gene56072:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAAAAGGAAAAA+TGG | + | chr4.4:28114932-28114951 | MS.gene56072:intron | 10.0% |
| !! | AAATAAATAAAAGGAAAAAT+GGG | + | chr4.4:28114933-28114952 | MS.gene56072:intron | 10.0% |
| !!! | ACATTTATTTTTTACAAAAA+AGG | + | chr4.4:28119934-28119953 | MS.gene56072:intron | 10.0% |
| !! | AAGATCTTAATATATTGAAT+AGG | - | chr4.4:28117979-28117998 | None:intergenic | 15.0% |
| !! | AGATCTTAATATATTGAATA+GGG | - | chr4.4:28117978-28117997 | None:intergenic | 15.0% |
| !! | ATTCAATATATTAAGATCTT+AGG | + | chr4.4:28117979-28117998 | MS.gene56072:intron | 15.0% |
| !! | CAAAAGAGAAAATAAATAAA+AGG | + | chr4.4:28114924-28114943 | MS.gene56072:intron | 15.0% |
| !! | TCATTATCAAATTAAGATTA+AGG | - | chr4.4:28116038-28116057 | None:intergenic | 15.0% |
| !! | TGAAAAAATCCTTATATTTA+AGG | - | chr4.4:28119903-28119922 | None:intergenic | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | - | chr4.4:28120267-28120286 | None:intergenic | 15.0% |
| !! | TTATGATATGTTACTATAAA+TGG | + | chr4.4:28114752-28114771 | MS.gene56072:intron | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | + | chr4.4:28119261-28119280 | MS.gene56072:intron | 15.0% |
| !! | TTTCTGTATATATATAATGA+AGG | + | chr4.4:28119260-28119279 | MS.gene56072:intron | 15.0% |
| !! | TTTGAATTTAAATTAACCAT+AGG | + | chr4.4:28115312-28115331 | MS.gene56072:intron | 15.0% |
| !!! | AAATTTTCAAAGAAAATAGA+GGG | - | chr4.4:28118586-28118605 | None:intergenic | 15.0% |
| !!! | AATCTTAGAAATTTTATCTT+AGG | - | chr4.4:28115180-28115199 | None:intergenic | 15.0% |
| !!! | ATCTTAGAAATTTTATCTTA+GGG | - | chr4.4:28115179-28115198 | None:intergenic | 15.0% |
| !!! | ATTGAAATTTATTTTTGTGT+AGG | + | chr4.4:28116498-28116517 | MS.gene56072:intron | 15.0% |
| !!! | TAAATTTTCAAAGAAAATAG+AGG | - | chr4.4:28118587-28118606 | None:intergenic | 15.0% |
| !!! | TTATAGTCATATTTTGAAAA+TGG | - | chr4.4:28116237-28116256 | None:intergenic | 15.0% |
| !!! | TTATCTTAGAAATTTTATCT+CGG | - | chr4.4:28115150-28115169 | None:intergenic | 15.0% |
| !!! | TTATTTTTTACAAAAAAGGA+CGG | + | chr4.4:28119938-28119957 | MS.gene56072:intron | 15.0% |
| !! | AAACATTATCCAAGAAAATT+CGG | + | chr4.4:28116352-28116371 | MS.gene56072:intron | 20.0% |
| !! | ATAGTAGTCTAATAAATTAG+AGG | - | chr4.4:28115012-28115031 | None:intergenic | 20.0% |
| !! | CTTATTACAGATTTATTGAA+TGG | - | chr4.4:28117121-28117140 | None:intergenic | 20.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | + | chr4.4:28119891-28119910 | MS.gene56072:intron | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | + | chr4.4:28119295-28119314 | MS.gene56072:CDS | 20.0% |
| !! | TACACGTATATAAAAAATTG+TGG | - | chr4.4:28119572-28119591 | None:intergenic | 20.0% |
| !! | TCTGTATATATATAATGAAG+GGG | + | chr4.4:28119262-28119281 | MS.gene56072:intron | 20.0% |
| !!! | ATCAACATAAAATACTGATT+TGG | - | chr4.4:28114615-28114634 | None:intergenic | 20.0% |
| !!! | ATCATTTTCAATTTCAAATG+TGG | + | chr4.4:28116154-28116173 | MS.gene56072:intron | 20.0% |
| !!! | ATTATGTATAGTACTTTTGA+AGG | - | chr4.4:28117565-28117584 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | + | chr4.4:28120334-28120353 | MS.gene56072:CDS | 20.0% |
| !!! | TAATGGTAGAAAATTTTATC+TGG | - | chr4.4:28116304-28116323 | None:intergenic | 20.0% |
| !!! | TAATGTTTCAAGTTTTGAAA+TGG | - | chr4.4:28116340-28116359 | None:intergenic | 20.0% |
| !!! | TCAATTTGAAACGAAAAAAA+CGG | - | chr4.4:28115559-28115578 | None:intergenic | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | - | chr4.4:28120206-28120225 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTTCCTGTTATAT+TGG | + | chr4.4:28116868-28116887 | MS.gene56072:intron | 20.0% |
| ! | AAATTAACCATAGGATCAAA+GGG | + | chr4.4:28115321-28115340 | MS.gene56072:intron | 25.0% |
| ! | AATATATTGAATAGGGCATA+AGG | - | chr4.4:28117971-28117990 | None:intergenic | 25.0% |
| ! | AATTGCATTTAGACTTAGTT+TGG | - | chr4.4:28118507-28118526 | None:intergenic | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | + | chr4.4:28119669-28119688 | MS.gene56072:intron | 25.0% |
| ! | ACCACCAACAATTTAATATT+AGG | - | chr4.4:28115586-28115605 | None:intergenic | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | + | chr4.4:28118995-28119014 | MS.gene56072:CDS | 25.0% |
| ! | ACTAGTTAAACTGTTCAATT+CGG | - | chr4.4:28118037-28118056 | None:intergenic | 25.0% |
| ! | ACTTGTCTTGATAGATAAAT+AGG | + | chr4.4:28116440-28116459 | MS.gene56072:intron | 25.0% |
| ! | ATATTGGATTTGTAAGGTTA+TGG | + | chr4.4:28116884-28116903 | MS.gene56072:intron | 25.0% |
| ! | ATGAGAATCACAAACAAATA+CGG | + | chr4.4:28115464-28115483 | MS.gene56072:intron | 25.0% |
| ! | ATTTAGAAGATACCAAATAC+AGG | - | chr4.4:28117940-28117959 | None:intergenic | 25.0% |
| ! | CAAAATGTGCTTATAAATAG+AGG | - | chr4.4:28119866-28119885 | None:intergenic | 25.0% |
| ! | GGAACTAATGACAAAATAAT+TGG | + | chr4.4:28116807-28116826 | MS.gene56072:intron | 25.0% |
| ! | GTAATAAGTGTGAAATGTTA+TGG | + | chr4.4:28117133-28117152 | MS.gene56072:intron | 25.0% |
| ! | GTTATTTATTCAACAGATGA+CGG | + | chr4.4:28117611-28117630 | MS.gene56072:intron | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | - | chr4.4:28120243-28120262 | None:intergenic | 25.0% |
| ! | TAAATTAACCATAGGATCAA+AGG | + | chr4.4:28115320-28115339 | MS.gene56072:intron | 25.0% |
| ! | TAATTCAAATAAAGCAAGAG+CGG | + | chr4.4:28116948-28116967 | MS.gene56072:intron | 25.0% |
| ! | TATTAAGATCTTAGGAACTA+CGG | + | chr4.4:28117987-28118006 | MS.gene56072:intron | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | + | chr4.4:28120228-28120247 | MS.gene56072:intron | 25.0% |
| ! | TCAATCTTAAACTCATTTCT+TGG | - | chr4.4:28115830-28115849 | None:intergenic | 25.0% |
| ! | TCGTAAATATGCAAATAGAT+TGG | + | chr4.4:28117731-28117750 | MS.gene56072:CDS | 25.0% |
| ! | TCTAAGAACTGATTGAAATT+TGG | + | chr4.4:28114636-28114655 | MS.gene56072:intron | 25.0% |
| ! | TTAATTTAAACATGACCTAG+AGG | + | chr4.4:28118243-28118262 | MS.gene56072:intron | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | + | chr4.4:28119174-28119193 | MS.gene56072:intron | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | + | chr4.4:28120050-28120069 | MS.gene56072:CDS | 25.0% |
| !! | ACTAAGATCTTTCTTTTTAC+TGG | + | chr4.4:28114695-28114714 | MS.gene56072:intron | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | + | chr4.4:28119605-28119624 | MS.gene56072:intron | 25.0% |
| !! | ATTTAGACTTAGTTTGGATT+AGG | - | chr4.4:28118501-28118520 | None:intergenic | 25.0% |
| !! | CATAAAAACTGACTTTATTG+AGG | + | chr4.4:28120014-28120033 | MS.gene56072:intron | 25.0% |
| !! | CTCCATTTTACAAATTTCTT+GGG | + | chr4.4:28116525-28116544 | MS.gene56072:intron | 25.0% |
| !! | CTCTATTTATAAGCACATTT+TGG | + | chr4.4:28119864-28119883 | MS.gene56072:intron | 25.0% |
| !! | TTAGTCTTCAAAATATCACA+TGG | + | chr4.4:28116786-28116805 | MS.gene56072:intron | 25.0% |
| !!! | AATTTTTTATGCGTTTCCTT+TGG | + | chr4.4:28115053-28115072 | MS.gene56072:intron | 25.0% |
| !!! | TAAGCAAGTTTTAAGAGATA+AGG | - | chr4.4:28116928-28116947 | None:intergenic | 25.0% |
| !!! | TGAAATTTTTTACGAAGAGA+GGG | + | chr4.4:28117664-28117683 | MS.gene56072:CDS | 25.0% |
| !!! | TTGAAATTTTTTACGAAGAG+AGG | + | chr4.4:28117663-28117682 | MS.gene56072:CDS | 25.0% |
| AAAATGGTGAGCTAAATGTA+AGG | - | chr4.4:28116221-28116240 | None:intergenic | 30.0% | |
| AAAGCTAGTTGAAGTTTAGT+TGG | - | chr4.4:28119498-28119517 | None:intergenic | 30.0% | |
| AAATAACTGAACCGTAAACA+GGG | - | chr4.4:28118190-28118209 | None:intergenic | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | + | chr4.4:28119427-28119446 | MS.gene56072:CDS | 30.0% | |
| AAATGGTGAGCTAAATGTAA+GGG | - | chr4.4:28116220-28116239 | None:intergenic | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | + | chr4.4:28118881-28118900 | MS.gene56072:CDS | 30.0% | |
| AAGTAATGTAGCCTAACAAA+TGG | + | chr4.4:28115412-28115431 | MS.gene56072:intron | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | + | chr4.4:28118998-28119017 | MS.gene56072:CDS | 30.0% | |
| AATGGTTTAGAGAAGGAAAA+AGG | + | chr4.4:28117328-28117347 | MS.gene56072:CDS | 30.0% | |
| AATGTGCTTATAAATAGAGG+CGG | - | chr4.4:28119863-28119882 | None:intergenic | 30.0% | |
| ACGTAATATCTACTAGATAG+TGG | - | chr4.4:28116552-28116571 | None:intergenic | 30.0% | |
| ACTTTATTGAGGCAAATCAA+GGG | + | chr4.4:28120025-28120044 | MS.gene56072:intron | 30.0% | |
| ATAATAGTGAATGCTGGAAA+CGG | + | chr4.4:28118645-28118664 | MS.gene56072:CDS | 30.0% | |
| ATATCCTCTTGAGAATGTTA+GGG | + | chr4.4:28117351-28117370 | MS.gene56072:CDS | 30.0% | |
| ATATCTTTGCAAACCAAACT+TGG | + | chr4.4:28117079-28117098 | MS.gene56072:intron | 30.0% | |
| ATATTGATGCTCAAATGTAC+AGG | + | chr4.4:28119806-28119825 | MS.gene56072:CDS | 30.0% | |
| ATCACACAAGTATAAACCAA+AGG | - | chr4.4:28115072-28115091 | None:intergenic | 30.0% | |
| ATCAGACTTCGTATCAAAAA+AGG | + | chr4.4:28114453-28114472 | MS.gene56072:CDS | 30.0% | |
| ATGAAGAATTGGACAAGATT+AGG | + | chr4.4:28117185-28117204 | MS.gene56072:CDS | 30.0% | |
| ATGGCAAGGAAAGAAAATAA+TGG | - | chr4.4:28116321-28116340 | None:intergenic | 30.0% | |
| ATTGTATTGAAGGAAAATCC+AGG | + | chr4.4:28118932-28118951 | MS.gene56072:CDS | 30.0% | |
| CAATCTTACATAGTAACTTC+AGG | - | chr4.4:28116012-28116031 | None:intergenic | 30.0% | |
| CACAATGTGTCAAAATATGT+AGG | - | chr4.4:28119657-28119676 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | - | chr4.4:28119225-28119244 | None:intergenic | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | + | chr4.4:28119100-28119119 | MS.gene56072:CDS | 30.0% | |
| CATTATGAAACTCCACTTAA+GGG | + | chr4.4:28117861-28117880 | MS.gene56072:CDS | 30.0% | |
| CCAAGAAATTTGTAAAATGG+AGG | - | chr4.4:28116527-28116546 | None:intergenic | 30.0% | |
| CCTGTTATATTGGATTTGTA+AGG | + | chr4.4:28116878-28116897 | MS.gene56072:intron | 30.0% | |
| CCTTACAAATCCAATATAAC+AGG | - | chr4.4:28116881-28116900 | None:intergenic | 30.0% | |
| CGAGCCTAATATTAAATTGT+TGG | + | chr4.4:28115579-28115598 | MS.gene56072:intron | 30.0% | |
| CTAATGCATAAAGTTAGAGA+AGG | - | chr4.4:28115954-28115973 | None:intergenic | 30.0% | |
| CTCAGTTGAAGATAAGTTTA+AGG | - | chr4.4:28115211-28115230 | None:intergenic | 30.0% | |
| CTTATGAATCAGTAGAACTT+AGG | + | chr4.4:28119381-28119400 | MS.gene56072:CDS | 30.0% | |
| GCCTAATATTAAATTGTTGG+TGG | + | chr4.4:28115582-28115601 | MS.gene56072:intron | 30.0% | |
| GTCCCAAGAAATTTGTAAAA+TGG | - | chr4.4:28116530-28116549 | None:intergenic | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | - | chr4.4:28119153-28119172 | None:intergenic | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | - | chr4.4:28120321-28120340 | None:intergenic | 30.0% | |
| TATGATGCTTCAATAATGGT+CGG | + | chr4.4:28117523-28117542 | MS.gene56072:CDS | 30.0% | |
| TGATGTCAAATTCACTGATA+TGG | + | chr4.4:28116055-28116074 | MS.gene56072:intron | 30.0% | |
| TGGTTTATACTTGTGTGATT+TGG | + | chr4.4:28115073-28115092 | MS.gene56072:intron | 30.0% | |
| TGTCTATGATGCTTCAATAA+TGG | + | chr4.4:28117519-28117538 | MS.gene56072:CDS | 30.0% | |
| TGTGATTTAAGCCATTTGTT+AGG | - | chr4.4:28115426-28115445 | None:intergenic | 30.0% | |
| TGTTACTATCATTCTTTGCT+AGG | + | chr4.4:28117049-28117068 | MS.gene56072:intron | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | + | chr4.4:28118815-28118834 | MS.gene56072:CDS | 30.0% | |
| TTCTGCAACTTAAACAAAGT+TGG | - | chr4.4:28114894-28114913 | None:intergenic | 30.0% | |
| TTGTTACATATGCCTGTATT+TGG | + | chr4.4:28117925-28117944 | MS.gene56072:intron | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | + | chr4.4:28119497-28119516 | MS.gene56072:intron | 30.0% |
| ! | AAGAAATTTTGAGCGTTTCT+GGG | - | chr4.4:28116581-28116600 | None:intergenic | 30.0% |
| ! | ATTGAAGCATCATAGACAAA+TGG | - | chr4.4:28117517-28117536 | None:intergenic | 30.0% |
| ! | CAAAGATGTTGAGAATTTTG+CGG | - | chr4.4:28117005-28117024 | None:intergenic | 30.0% |
| ! | CCTCCATTTTACAAATTTCT+TGG | + | chr4.4:28116524-28116543 | MS.gene56072:intron | 30.0% |
| ! | CTCATGAAATCAACTTTTGT+TGG | - | chr4.4:28117786-28117805 | None:intergenic | 30.0% |
| ! | GTAAAGAATCCGAATTTTCT+TGG | - | chr4.4:28116364-28116383 | None:intergenic | 30.0% |
| ! | TATAATTTTCACCACCATGT+AGG | - | chr4.4:28119288-28119307 | None:intergenic | 30.0% |
| ! | TGGATTTTCCTTCAATACAA+TGG | - | chr4.4:28118933-28118952 | None:intergenic | 30.0% |
| ! | TTTTTACAAAAAAGGACGGA+GGG | + | chr4.4:28119942-28119961 | MS.gene56072:intron | 30.0% |
| !! | CTAAATGCAATTTTGAAGAG+AGG | + | chr4.4:28118515-28118534 | MS.gene56072:intron | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | - | chr4.4:28119383-28119402 | None:intergenic | 30.0% |
| !! | TTTATAAGCACATTTTGGAG+AGG | + | chr4.4:28119869-28119888 | MS.gene56072:intron | 30.0% |
| !!! | AAATTTTTTACGAAGAGAGG+GGG | + | chr4.4:28117666-28117685 | MS.gene56072:CDS | 30.0% |
| !!! | CTACATATTTTGACACATTG+TGG | + | chr4.4:28119655-28119674 | MS.gene56072:intron | 30.0% |
| !!! | GAAATTTTTTACGAAGAGAG+GGG | + | chr4.4:28117665-28117684 | MS.gene56072:CDS | 30.0% |
| !!! | TTTCAAGTTTTGAAATGGCA+AGG | - | chr4.4:28116335-28116354 | None:intergenic | 30.0% |
| !!! | TTTTTTACAAAAAAGGACGG+AGG | + | chr4.4:28119941-28119960 | MS.gene56072:intron | 30.0% |
| AAAGTATGATGAAGTAGTGG+TGG | + | chr4.4:28117162-28117181 | MS.gene56072:intron | 35.0% | |
| AACAATGAACATGGACAACA+TGG | + | chr4.4:28120059-28120078 | MS.gene56072:CDS | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | + | chr4.4:28119460-28119479 | MS.gene56072:CDS | 35.0% | |
| AACTGAGTTCATCACAAACT+TGG | + | chr4.4:28115344-28115363 | MS.gene56072:intron | 35.0% | |
| AAGAATTGGACAAGATTAGG+AGG | + | chr4.4:28117188-28117207 | MS.gene56072:CDS | 35.0% | |
| AAGTACTAGTCGAAATTGAG+TGG | + | chr4.4:28115868-28115887 | MS.gene56072:CDS | 35.0% | |
| AATGGTGAGCTAAATGTAAG+GGG | - | chr4.4:28116219-28116238 | None:intergenic | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | - | chr4.4:28119147-28119166 | None:intergenic | 35.0% | |
| AGAAGATGAGAAACCAAGTT+TGG | - | chr4.4:28117095-28117114 | None:intergenic | 35.0% | |
| AGTGGAGTTTCATAATGCAA+AGG | - | chr4.4:28117858-28117877 | None:intergenic | 35.0% | |
| ATATCTCCAATGTGTGAAGA+TGG | + | chr4.4:28115698-28115717 | MS.gene56072:CDS | 35.0% | |
| ATCTTCACACATTGGAGATA+TGG | - | chr4.4:28115699-28115718 | None:intergenic | 35.0% | |
| ATGAGTTTGTCACCGTTTAT+TGG | - | chr4.4:28118896-28118915 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | + | chr4.4:28119106-28119125 | MS.gene56072:CDS | 35.0% | |
| ATGCCAGCTTATGAGTTAAA+AGG | - | chr4.4:28118462-28118481 | None:intergenic | 35.0% | |
| ATGGTCGGTTACATAAAACT+TGG | + | chr4.4:28117538-28117557 | MS.gene56072:CDS | 35.0% | |
| ATTGATGTTACAGAATCCGA+AGG | + | chr4.4:28115891-28115910 | MS.gene56072:CDS | 35.0% | |
| ATTTGAATACAGCGCATTAC+AGG | - | chr4.4:28118552-28118571 | None:intergenic | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | - | chr4.4:28119802-28119821 | None:intergenic | 35.0% | |
| CAAATAACTGAACCGTAAAC+AGG | - | chr4.4:28118191-28118210 | None:intergenic | 35.0% | |
| CATATCGTTGTCCAAAAACT+TGG | + | chr4.4:28115259-28115278 | MS.gene56072:intron | 35.0% | |
| CTACAGATAATAGTGAATGC+TGG | + | chr4.4:28118639-28118658 | MS.gene56072:intron | 35.0% | |
| CTATGGTTATTTGAGTGGTT+CGG | + | chr4.4:28118083-28118102 | MS.gene56072:intron | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | - | chr4.4:28119051-28119070 | None:intergenic | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | + | chr4.4:28119139-28119158 | MS.gene56072:CDS | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | + | chr4.4:28119311-28119330 | MS.gene56072:CDS | 35.0% | |
| GACTTTATTGAGGCAAATCA+AGG | + | chr4.4:28120024-28120043 | MS.gene56072:intron | 35.0% | |
| GATATCCTCTTGAGAATGTT+AGG | + | chr4.4:28117350-28117369 | MS.gene56072:CDS | 35.0% | |
| GCATTATGAAACTCCACTTA+AGG | + | chr4.4:28117860-28117879 | MS.gene56072:CDS | 35.0% | |
| GCGGCAAATAAAATCAACAA+TGG | + | chr4.4:28116967-28116986 | MS.gene56072:intron | 35.0% | |
| GGTTATCAATGGTTTAGAGA+AGG | + | chr4.4:28117321-28117340 | MS.gene56072:CDS | 35.0% | |
| GGTTGTATGGTGTTTGATAT+GGG | + | chr4.4:28117448-28117467 | MS.gene56072:CDS | 35.0% | |
| GTAATCTGCAAGAATATACC+AGG | + | chr4.4:28116755-28116774 | MS.gene56072:intron | 35.0% | |
| TAAATGAGAGAGCTTCTCAA+AGG | - | chr4.4:28118435-28118454 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | + | chr4.4:28119046-28119065 | MS.gene56072:CDS | 35.0% | |
| TATCTCCAATGTGTGAAGAT+GGG | + | chr4.4:28115699-28115718 | MS.gene56072:CDS | 35.0% | |
| TGCAAAGTATGATGAAGTAG+TGG | + | chr4.4:28117159-28117178 | MS.gene56072:intron | 35.0% | |
| TGGTTGTATGGTGTTTGATA+TGG | + | chr4.4:28117447-28117466 | MS.gene56072:CDS | 35.0% | |
| TGTTAACACACCAATACATC+TGG | + | chr4.4:28114854-28114873 | MS.gene56072:CDS | 35.0% | |
| TTTATGTTGCTGTACAGGAA+GGG | + | chr4.4:28119698-28119717 | MS.gene56072:intron | 35.0% | |
| ! | AGGCAATATCAGAGAGTTTT+GGG | + | chr4.4:28117293-28117312 | MS.gene56072:CDS | 35.0% |
| ! | CAAGAAATTTTGAGCGTTTC+TGG | - | chr4.4:28116582-28116601 | None:intergenic | 35.0% |
| ! | CTTACTGCTAGAAGTTGTTT+TGG | + | chr4.4:28116626-28116645 | MS.gene56072:intron | 35.0% |
| ! | TCTCCTTGATGATTTCTCTT+AGG | - | chr4.4:28117824-28117843 | None:intergenic | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | + | chr4.4:28119697-28119716 | MS.gene56072:intron | 35.0% |
| !! | AGATTGAGAAATGTTGACTC+TGG | + | chr4.4:28115843-28115862 | MS.gene56072:CDS | 35.0% |
| !! | CAAGTTTTTGGACAACGATA+TGG | - | chr4.4:28115261-28115280 | None:intergenic | 35.0% |
| !! | CTAACTAACTTGTTCTTCCA+TGG | - | chr4.4:28114532-28114551 | None:intergenic | 35.0% |
| !! | CTTCCTTTTAACTCATAAGC+TGG | + | chr4.4:28118456-28118475 | MS.gene56072:intron | 35.0% |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | + | chr4.4:28119693-28119712 | MS.gene56072:intron | 35.0% |
| !!! | AATTTTTTACGAAGAGAGGG+GGG | + | chr4.4:28117667-28117686 | MS.gene56072:CDS | 35.0% |
| AACACAATTGACCATGCTTG+TGG | - | chr4.4:28116670-28116689 | None:intergenic | 40.0% | |
| AACCAACGCGGTATAAACAA+TGG | - | chr4.4:28119027-28119046 | None:intergenic | 40.0% | |
| AACTCCACTTAAGGGATTTC+AGG | + | chr4.4:28117869-28117888 | MS.gene56072:CDS | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | + | chr4.4:28120128-28120147 | MS.gene56072:CDS | 40.0% | |
| AAGATAACTGCCATCCTGAA+TGG | + | chr4.4:28114802-28114821 | MS.gene56072:CDS | 40.0% | |
| AAGATTAGGAGGCTTCAGAA+TGG | + | chr4.4:28117199-28117218 | MS.gene56072:CDS | 40.0% | |
| AATGTGCTCATGAAACAAGC+GGG | - | chr4.4:28117487-28117506 | None:intergenic | 40.0% | |
| AATTAGCAATGCCTGCACTA+TGG | + | chr4.4:28118066-28118085 | MS.gene56072:intron | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | + | chr4.4:28119741-28119760 | MS.gene56072:CDS | 40.0% | |
| ATACGGCTGATGCATTGTAT+TGG | + | chr4.4:28115481-28115500 | MS.gene56072:intron | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | + | chr4.4:28119271-28119290 | MS.gene56072:intron | 40.0% | |
| ATCTCCAATGTGTGAAGATG+GGG | + | chr4.4:28115700-28115719 | MS.gene56072:CDS | 40.0% | |
| ATGAACATGGACAACATGGT+TGG | + | chr4.4:28120063-28120082 | MS.gene56072:CDS | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | + | chr4.4:28119314-28119333 | MS.gene56072:CDS | 40.0% | |
| ATTGAATAGGGCATAAGGCA+AGG | - | chr4.4:28117966-28117985 | None:intergenic | 40.0% | |
| CAAACCTGAAATCCCTTAAG+TGG | - | chr4.4:28117876-28117895 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | + | chr4.4:28119063-28119082 | MS.gene56072:CDS | 40.0% | |
| CAATGTGCTCATGAAACAAG+CGG | - | chr4.4:28117488-28117507 | None:intergenic | 40.0% | |
| CACTCAAATAACCATAGTGC+AGG | - | chr4.4:28118080-28118099 | None:intergenic | 40.0% | |
| CAGTTTAACCATGACTCAGA+CGG | + | chr4.4:28118139-28118158 | MS.gene56072:intron | 40.0% | |
| CATAAGCTGGCATAAAGCAT+AGG | + | chr4.4:28118469-28118488 | MS.gene56072:intron | 40.0% | |
| CCATGAATTGACCCTGTTTA+CGG | + | chr4.4:28118176-28118195 | MS.gene56072:intron | 40.0% | |
| CCATGGTGACAAGAACATAA+GGG | - | chr4.4:28114515-28114534 | None:intergenic | 40.0% | |
| CCTCGAAATGCTAAAGCAAA+AGG | + | chr4.4:28119422-28119441 | MS.gene56072:CDS | 40.0% | |
| CTGCACTATGGTTATTTGAG+TGG | + | chr4.4:28118078-28118097 | MS.gene56072:intron | 40.0% | |
| GATGTTGTAGCCTAGATGAA+GGG | + | chr4.4:28115523-28115542 | MS.gene56072:intron | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | - | chr4.4:28120115-28120134 | None:intergenic | 40.0% | |
| GCACCTAAGAGAAATCATCA+AGG | + | chr4.4:28117818-28117837 | MS.gene56072:CDS | 40.0% | |
| GGAACTACGGCATTTATGAT+AGG | + | chr4.4:28118000-28118019 | MS.gene56072:intron | 40.0% | |
| GTACTCCTAAAACTCAACCT+CGG | - | chr4.4:28115928-28115947 | None:intergenic | 40.0% | |
| GTCAGTTCTTCATTCCATTC+AGG | - | chr4.4:28114819-28114838 | None:intergenic | 40.0% | |
| GTTCATCACAAACTTGGTTG+CGG | + | chr4.4:28115350-28115369 | MS.gene56072:intron | 40.0% | |
| GTTCTTCATTCCATTCAGGA+TGG | - | chr4.4:28114815-28114834 | None:intergenic | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | + | chr4.4:28118687-28118706 | MS.gene56072:CDS | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | + | chr4.4:28119740-28119759 | MS.gene56072:CDS | 40.0% | |
| TCCATGGTGACAAGAACATA+AGG | - | chr4.4:28114516-28114535 | None:intergenic | 40.0% | |
| TCTTGACTACATGTCCATCT+GGG | - | chr4.4:28115737-28115756 | None:intergenic | 40.0% | |
| TGAACATGGACAACATGGTT+GGG | + | chr4.4:28120064-28120083 | MS.gene56072:CDS | 40.0% | |
| TGAAGACTAAAATGTGTGCC+TGG | - | chr4.4:28116776-28116795 | None:intergenic | 40.0% | |
| TGACAAACTCATTGCTCTCA+TGG | + | chr4.4:28118904-28118923 | MS.gene56072:CDS | 40.0% | |
| TGATGTTGTAGCCTAGATGA+AGG | + | chr4.4:28115522-28115541 | MS.gene56072:intron | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | - | chr4.4:28118744-28118763 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | - | chr4.4:28120116-28120135 | None:intergenic | 40.0% | |
| TGCTTATAAATAGAGGCGGA+GGG | - | chr4.4:28119859-28119878 | None:intergenic | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | - | chr4.4:28119420-28119439 | None:intergenic | 40.0% | |
| TGTTGATACAAATGACACCC+CGG | + | chr4.4:28119780-28119799 | MS.gene56072:CDS | 40.0% | |
| TTCAAACCATTGCGTGTGTA+AGG | - | chr4.4:28117648-28117667 | None:intergenic | 40.0% | |
| TTCACTGTGGACGACAAAAT+GGG | + | chr4.4:28115651-28115670 | MS.gene56072:CDS | 40.0% | |
| TTGAATAGGGCATAAGGCAA+GGG | - | chr4.4:28117965-28117984 | None:intergenic | 40.0% | |
| TTTAAGCAGAGTAGACACTC+TGG | - | chr4.4:28117757-28117776 | None:intergenic | 40.0% | |
| TTTCACTGTGGACGACAAAA+TGG | + | chr4.4:28115650-28115669 | MS.gene56072:CDS | 40.0% | |
| TTTCCTTCTCTATGAGTCAG+TGG | - | chr4.4:28118331-28118350 | None:intergenic | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | - | chr4.4:28119801-28119820 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | - | chr4.4:28119425-28119444 | None:intergenic | 40.0% |
| ! | CTGCTTTAAACCACTAGAAC+CGG | - | chr4.4:28118122-28118141 | None:intergenic | 40.0% |
| ! | CTTATCCGAGGTTGAGTTTT+AGG | + | chr4.4:28115920-28115939 | MS.gene56072:intron | 40.0% |
| ! | GAAGCATCATAGACAAATGG+AGG | - | chr4.4:28117514-28117533 | None:intergenic | 40.0% |
| ! | GAGGCAATATCAGAGAGTTT+TGG | + | chr4.4:28117292-28117311 | MS.gene56072:CDS | 40.0% |
| ! | GGCAATATCAGAGAGTTTTG+GGG | + | chr4.4:28117294-28117313 | MS.gene56072:CDS | 40.0% |
| ! | TGAGAATTTTGCGGAAGTAG+AGG | - | chr4.4:28116996-28117015 | None:intergenic | 40.0% |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | + | chr4.4:28120283-28120302 | MS.gene56072:intron | 40.0% |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | - | chr4.4:28118792-28118811 | None:intergenic | 40.0% |
| !! | AGTAGTGGTGGATGAAGAAT+TGG | + | chr4.4:28117174-28117193 | MS.gene56072:CDS | 40.0% |
| !! | GGGTGTCATTTGTATCAACA+AGG | - | chr4.4:28119780-28119799 | None:intergenic | 40.0% |
| !! | TGAGTACTGACCAGATGTAT+TGG | - | chr4.4:28114867-28114886 | None:intergenic | 40.0% |
| AACATGGTTGGGTACACATG+AGG | + | chr4.4:28120075-28120094 | MS.gene56072:CDS | 45.0% | |
| AATTTAGACCCTGTGACTCG+AGG | - | chr4.4:28117394-28117413 | None:intergenic | 45.0% | |
| ACATGACCTAGAGGTCTCAT+TGG | + | chr4.4:28118252-28118271 | MS.gene56072:intron | 45.0% | |
| ACTCTCTGATATTGCCTCCA+CGG | - | chr4.4:28117290-28117309 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | + | chr4.4:28119066-28119085 | MS.gene56072:CDS | 45.0% | |
| ATCCAACCAATGAGACCTCT+AGG | - | chr4.4:28118261-28118280 | None:intergenic | 45.0% | |
| ATTTAGACCCTGTGACTCGA+GGG | - | chr4.4:28117393-28117412 | None:intergenic | 45.0% | |
| CACCATTGTTTATACCGCGT+TGG | + | chr4.4:28119022-28119041 | MS.gene56072:CDS | 45.0% | |
| CATGACTCAGACGGTTCAAT+CGG | + | chr4.4:28118148-28118167 | MS.gene56072:intron | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | + | chr4.4:28118922-28118941 | MS.gene56072:CDS | 45.0% | |
| CATTTGCCTTACACACGCAA+TGG | + | chr4.4:28117639-28117658 | MS.gene56072:CDS | 45.0% | |
| CCCTTATGTTCTTGTCACCA+TGG | + | chr4.4:28114512-28114531 | MS.gene56072:CDS | 45.0% | |
| CCGTAAACAGGGTCAATTCA+TGG | - | chr4.4:28118179-28118198 | None:intergenic | 45.0% | |
| CGACAAAGACACTTTCACTG+TGG | + | chr4.4:28115638-28115657 | MS.gene56072:CDS | 45.0% | |
| CTAATCACATTCCAATCCCG+AGG | + | chr4.4:28118757-28118776 | MS.gene56072:intron | 45.0% | |
| CTCAGTTCCCTTTGATCCTA+TGG | - | chr4.4:28115331-28115350 | None:intergenic | 45.0% | |
| CTCGGGATTGGAATGTGATT+AGG | - | chr4.4:28118759-28118778 | None:intergenic | 45.0% | |
| GACAAGTCAGACAGAAGAGA+AGG | + | chr4.4:28116102-28116121 | MS.gene56072:intron | 45.0% | |
| GACACCCTAACATTCTCAAG+AGG | - | chr4.4:28117358-28117377 | None:intergenic | 45.0% | |
| GATACCGATGTTGACAGAAG+CGG | + | chr4.4:28118848-28118867 | MS.gene56072:CDS | 45.0% | |
| GCTAGGCAATTAGTCGTATC+TGG | - | chr4.4:28115768-28115787 | None:intergenic | 45.0% | |
| GCTTATAAATAGAGGCGGAG+GGG | - | chr4.4:28119858-28119877 | None:intergenic | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | + | chr4.4:28119067-28119086 | MS.gene56072:CDS | 45.0% | |
| GGATGTTAGAGGAGTTGCAT+TGG | + | chr4.4:28117225-28117244 | MS.gene56072:CDS | 45.0% | |
| GTCTTGACTACATGTCCATC+TGG | - | chr4.4:28115738-28115757 | None:intergenic | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | + | chr4.4:28119752-28119771 | MS.gene56072:CDS | 45.0% | |
| GTGCTTATAAATAGAGGCGG+AGG | - | chr4.4:28119860-28119879 | None:intergenic | 45.0% | |
| GTTACAGAATCCGAAGGCAA+AGG | + | chr4.4:28115897-28115916 | MS.gene56072:CDS | 45.0% | |
| GTTAGAGGAGTTGCATTGGA+AGG | + | chr4.4:28117229-28117248 | MS.gene56072:CDS | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | + | chr4.4:28119710-28119729 | MS.gene56072:intron | 45.0% | |
| TAGGAGGCTTCAGAATGGTT+CGG | + | chr4.4:28117204-28117223 | MS.gene56072:CDS | 45.0% | |
| TCAACCCCATCTTCACACAT+TGG | - | chr4.4:28115707-28115726 | None:intergenic | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | + | chr4.4:28120145-28120164 | MS.gene56072:CDS | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | - | chr4.4:28118953-28118972 | None:intergenic | 45.0% | |
| TCTGAGTAGTAGACGCTTGT+TGG | - | chr4.4:28116395-28116414 | None:intergenic | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | - | chr4.4:28119039-28119058 | None:intergenic | 45.0% | |
| TGCTAAAGCAAAAGGATCGG+AGG | + | chr4.4:28119430-28119449 | MS.gene56072:CDS | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | - | chr4.4:28119800-28119819 | None:intergenic | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | + | chr4.4:28120131-28120150 | MS.gene56072:CDS | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | + | chr4.4:28119326-28119345 | MS.gene56072:CDS | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | + | chr4.4:28119327-28119346 | MS.gene56072:CDS | 45.0% |
| ! | CAGAATGGTTCGGATGTTAG+AGG | + | chr4.4:28117214-28117233 | MS.gene56072:CDS | 45.0% |
| ! | GAGAATGTTAGGGTGTCTCT+TGG | + | chr4.4:28117361-28117380 | MS.gene56072:CDS | 45.0% |
| ! | GAGCGATCACAGTTTCGTTT+TGG | + | chr4.4:28118210-28118229 | MS.gene56072:intron | 45.0% |
| ! | GGTCTCATTGGTTGGATGTT+CGG | + | chr4.4:28118264-28118283 | MS.gene56072:intron | 45.0% |
| ! | GTAGACTCTCGCCAAGTTTT+TGG | - | chr4.4:28115273-28115292 | None:intergenic | 45.0% |
| ! | GTGCAGGCATTGCTAATTCA+TGG | - | chr4.4:28118064-28118083 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | - | chr4.4:28118777-28118796 | None:intergenic | 45.0% |
| ! | TTGAGTGTTGCAGTGTTTGC+CGG | + | chr4.4:28117412-28117431 | MS.gene56072:CDS | 45.0% |
| !! | AAGCTTGGTGCAGATACCTT+TGG | + | chr4.4:28118702-28118721 | MS.gene56072:CDS | 45.0% |
| !! | TCTCCACTGACTCATAGAGA+AGG | + | chr4.4:28118325-28118344 | MS.gene56072:intron | 45.0% |
| !! | TGTACGAGCATCGGTTACTA+TGG | - | chr4.4:28118963-28118982 | None:intergenic | 45.0% |
| !! | TTTGGGGAGTGGGTTATCAA+TGG | + | chr4.4:28117310-28117329 | MS.gene56072:CDS | 45.0% |
| !!! | ATCAGAGAGTTTTGGGGAGT+GGG | + | chr4.4:28117300-28117319 | MS.gene56072:CDS | 45.0% |
| !!! | TATCAGAGAGTTTTGGGGAG+TGG | + | chr4.4:28117299-28117318 | MS.gene56072:CDS | 45.0% |
| AATGCTGGAAACGGTTCAGG+AGG | + | chr4.4:28118654-28118673 | MS.gene56072:CDS | 50.0% | |
| ACTGACACTAGCCACAAGCA+TGG | + | chr4.4:28116656-28116675 | MS.gene56072:intron | 50.0% | |
| AGTAGCTGCGTATGGAGAGA+TGG | + | chr4.4:28115795-28115814 | MS.gene56072:CDS | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | + | chr4.4:28119701-28119720 | MS.gene56072:intron | 50.0% | |
| CCATACGCAGCTACTCTCTT+CGG | - | chr4.4:28115790-28115809 | None:intergenic | 50.0% | |
| CGACATGCTTGTACGAGCAT+CGG | - | chr4.4:28118972-28118991 | None:intergenic | 50.0% | |
| CGATTGAACCGTCTGAGTCA+TGG | - | chr4.4:28118150-28118169 | None:intergenic | 50.0% | |
| CTCAGACCAACAAGCGTCTA+CGG | + | chr4.4:28116386-28116405 | MS.gene56072:intron | 50.0% | |
| CTCGGATAAGCCTTTGCCTT+CGG | - | chr4.4:28115910-28115929 | None:intergenic | 50.0% | |
| GACAAGAACATAAGGGTCGC+TGG | - | chr4.4:28114508-28114527 | None:intergenic | 50.0% | |
| GACCTAGAGGTCTCATTGGT+TGG | + | chr4.4:28118256-28118275 | MS.gene56072:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | + | chr4.4:28119751-28119770 | MS.gene56072:CDS | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | + | chr4.4:28119332-28119351 | MS.gene56072:CDS | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | + | chr4.4:28119709-28119728 | MS.gene56072:intron | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | + | chr4.4:28118651-28118670 | MS.gene56072:CDS | 50.0% | |
| GTTGCATTGGAAGGCGAGAA+AGG | + | chr4.4:28117238-28117257 | MS.gene56072:CDS | 50.0% | |
| TAATGAAGGGGCCTACATGG+TGG | + | chr4.4:28119274-28119293 | MS.gene56072:intron | 50.0% | |
| TCCCGAGGACAAAATTGCCA+TGG | + | chr4.4:28118772-28118791 | MS.gene56072:intron | 50.0% | |
| TCGCTGGTACGAGAATCATG+AGG | - | chr4.4:28114492-28114511 | None:intergenic | 50.0% | |
| TCTGTGTGCACCCTTCATCT+AGG | - | chr4.4:28115536-28115555 | None:intergenic | 50.0% | |
| ! | CACTTTCGTTCCGGTTCTAG+TGG | + | chr4.4:28118109-28118128 | MS.gene56072:intron | 50.0% |
| ! | GCCATGGCAATTTTGTCCTC+GGG | - | chr4.4:28118776-28118795 | None:intergenic | 50.0% |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | - | chr4.4:28118771-28118790 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | + | chr4.4:28118866-28118885 | MS.gene56072:CDS | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | + | chr4.4:28118867-28118886 | MS.gene56072:CDS | 50.0% |
| !! | TCTTGCTCGTGCTGGTTGTA+TGG | + | chr4.4:28117435-28117454 | MS.gene56072:CDS | 50.0% |
| ACAACCAGCACGAGCAAGAC+CGG | - | chr4.4:28117434-28117453 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | + | chr4.4:28119713-28119732 | MS.gene56072:intron | 55.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | - | chr4.4:28118855-28118874 | None:intergenic | 55.0% | |
| CCGAAGAGAGTAGCTGCGTA+TGG | + | chr4.4:28115787-28115806 | MS.gene56072:CDS | 55.0% | |
| CGAAGGCAAAGGCTTATCCG+AGG | + | chr4.4:28115908-28115927 | MS.gene56072:CDS | 55.0% | |
| CGTAGACCGTAGACGCTTGT+TGG | - | chr4.4:28116418-28116437 | None:intergenic | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | + | chr4.4:28119714-28119733 | MS.gene56072:intron | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | + | chr4.4:28119730-28119749 | MS.gene56072:CDS | 55.0% | |
| GTTCGGTCGCACTTTCGTTC+CGG | + | chr4.4:28118100-28118119 | MS.gene56072:intron | 55.0% | |
| TCTGATATTGCCTCCACGGC+AGG | - | chr4.4:28117286-28117305 | None:intergenic | 55.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | + | chr4.4:28118853-28118872 | MS.gene56072:CDS | 60.0% | |
| CGCAGCTACTCTCTTCGGCT+AGG | - | chr4.4:28115785-28115804 | None:intergenic | 60.0% | |
| GATATTGCCTCCACGGCAGG+AGG | - | chr4.4:28117283-28117302 | None:intergenic | 60.0% | |
| GGGTTGAGCGATCTCCCAGA+TGG | + | chr4.4:28115720-28115739 | MS.gene56072:CDS | 60.0% | |
| TTTGCCGGTCTTGCTCGTGC+TGG | + | chr4.4:28117427-28117446 | MS.gene56072:CDS | 60.0% | |
| CCTCCACGGCAGGAGGAGTA+AGG | - | chr4.4:28117276-28117295 | None:intergenic | 65.0% | |
| CCTTACTCCTCCTGCCGTGG+AGG | + | chr4.4:28117273-28117292 | MS.gene56072:CDS | 65.0% | |
| CGACCTTACTCCTCCTGCCG+TGG | + | chr4.4:28117270-28117289 | MS.gene56072:CDS | 65.0% | |
| GACGCGACCCTCGAGTCACA+GGG | + | chr4.4:28117383-28117402 | MS.gene56072:CDS | 65.0% | |
| ! | AGGGGGGCTGACTTCACTGG+AGG | + | chr4.4:28117683-28117702 | MS.gene56072:CDS | 65.0% |
| ! | GAGAGGGGGGCTGACTTCAC+TGG | + | chr4.4:28117680-28117699 | MS.gene56072:CDS | 65.0% |
| GGACGCGACCCTCGAGTCAC+AGG | + | chr4.4:28117382-28117401 | MS.gene56072:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 28114432 | 28120369 | 28114432 | ID=MS.gene56072 |
| chr4.4 | mRNA | 28114432 | 28120369 | 28114432 | ID=MS.gene56072.t1;Parent=MS.gene56072 |
| chr4.4 | exon | 28114432 | 28114542 | 28114432 | ID=MS.gene56072.t1.exon1;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28114432 | 28114542 | 28114432 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28114780 | 28114875 | 28114780 | ID=MS.gene56072.t1.exon2;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28114780 | 28114875 | 28114780 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28115630 | 28115929 | 28115630 | ID=MS.gene56072.t1.exon3;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28115630 | 28115929 | 28115630 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28117166 | 28117570 | 28117166 | ID=MS.gene56072.t1.exon4;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28117166 | 28117570 | 28117166 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28117627 | 28117890 | 28117627 | ID=MS.gene56072.t1.exon5;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28117627 | 28117890 | 28117627 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28118645 | 28118751 | 28118645 | ID=MS.gene56072.t1.exon6;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28118645 | 28118751 | 28118645 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28118805 | 28119160 | 28118805 | ID=MS.gene56072.t1.exon7;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28118805 | 28119160 | 28118805 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28119282 | 28119481 | 28119282 | ID=MS.gene56072.t1.exon8;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28119282 | 28119481 | 28119282 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28119715 | 28119827 | 28119715 | ID=MS.gene56072.t1.exon9;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28119715 | 28119827 | 28119715 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28120046 | 28120186 | 28120046 | ID=MS.gene56072.t1.exon10;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28120046 | 28120186 | 28120046 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| chr4.4 | exon | 28120288 | 28120369 | 28120288 | ID=MS.gene56072.t1.exon11;Parent=MS.gene56072.t1 |
| chr4.4 | CDS | 28120288 | 28120369 | 28120288 | ID=cds.MS.gene56072.t1;Parent=MS.gene56072.t1 |
| Gene Sequence |
| Protein sequence |
