Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056168.t1 | XP_024636185.1 | 76 | 966 | 33 | 2 | 2 | 807 | 45 | 971 | 0.00E+00 | 1447.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056168.t1 | A0A1S2XQX5 | 71.8 | 865 | 205 | 6 | 8 | 835 | 51 | 913 | 0.0e+00 | 1256.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054124 | MS.gene056168 | 0.805831 | 1.10E-49 | -1.69E-46 |
| MS.gene056167 | MS.gene056168 | 0.917151 | 7.53E-86 | -1.69E-46 |
| MS.gene056168 | MS.gene060036 | 0.927637 | 8.91E-92 | -1.69E-46 |
| MS.gene056168 | MS.gene070472 | 0.805965 | 1.03E-49 | -1.69E-46 |
| MS.gene056168 | MS.gene070814 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene056168 | MS.gene23218 | 0.800206 | 1.61E-48 | -1.69E-46 |
| MS.gene056168 | MS.gene38477 | 0.806733 | 7.13E-50 | -1.69E-46 |
| MS.gene056168 | MS.gene51015 | 0.806835 | 6.78E-50 | -1.69E-46 |
| MS.gene056168 | MS.gene51016 | 0.836095 | 1.14E-56 | -1.69E-46 |
| MS.gene056168 | MS.gene62536 | 0.81195 | 5.42E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056168.t1 | MTR_8g057120 | 39.310 | 145 | 80 | 3 | 44 | 188 | 22 | 158 | 2.29e-23 | 101 |
| MS.gene056168.t1 | MTR_2g092960 | 46.226 | 106 | 55 | 2 | 928 | 1033 | 509 | 612 | 4.37e-19 | 94.0 |
| MS.gene056168.t1 | MTR_3g011560 | 44.828 | 87 | 47 | 1 | 946 | 1032 | 7 | 92 | 5.40e-13 | 73.6 |
| MS.gene056168.t1 | MTR_2g037270 | 44.828 | 87 | 47 | 1 | 946 | 1032 | 7 | 92 | 6.13e-13 | 73.6 |
| MS.gene056168.t1 | MTR_8g017000 | 44.828 | 87 | 47 | 1 | 946 | 1032 | 7 | 92 | 6.63e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 195 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCATTTCCTGGTTTCTT+AGG | 0.139946 | 8.1:-66006347 | None:intergenic |
| CGCTTAAGTCTTGGAATTAT+TGG | 0.140119 | 8.1:-66006023 | None:intergenic |
| GACTCTATTCACCCTCTTAT+TGG | 0.157170 | 8.1:-66008870 | None:intergenic |
| ATATCCATTTGGTATAATTT+TGG | 0.161233 | 8.1:-66005476 | None:intergenic |
| CAGCTTCTGTTCAATTAAAA+TGG | 0.203088 | 8.1:+66007848 | MS.gene056168:CDS |
| ATGTTATCCATGATGATTTC+AGG | 0.231232 | 8.1:+66006323 | MS.gene056168:CDS |
| TGGTTTCTTTAAACCACTTT+AGG | 0.241756 | 8.1:-66007810 | None:intergenic |
| AGCTGTATTGTCATTTAAAA+TGG | 0.245973 | 8.1:-66007830 | None:intergenic |
| TTGGGATCATTGATGAGATT+TGG | 0.249949 | 8.1:+66008058 | MS.gene056168:CDS |
| AACGCTCAACCTACCGAAAA+TGG | 0.250920 | 8.1:+66008929 | MS.gene056168:CDS |
| GGAACACTTCTCAACATTAA+TGG | 0.260497 | 8.1:+66006902 | MS.gene056168:CDS |
| CGGTACAATATACAATCATT+TGG | 0.267262 | 8.1:-66005876 | None:intergenic |
| GGAGTTAAAACTGATGAATT+TGG | 0.268237 | 8.1:+66008144 | MS.gene056168:CDS |
| GATGACTTATATCCAGAATT+CGG | 0.284780 | 8.1:+66006155 | MS.gene056168:CDS |
| AAAGGTGTCAATGTTACATT+AGG | 0.286908 | 8.1:+66006737 | MS.gene056168:CDS |
| TCGCAAGGGATAACTACTTT+TGG | 0.311329 | 8.1:+66008348 | MS.gene056168:CDS |
| AAAAGATCAAAATCCGATTA+TGG | 0.319175 | 8.1:+66008020 | MS.gene056168:CDS |
| TCAATGTTTCAAACTCATTT+CGG | 0.335176 | 8.1:-66005896 | None:intergenic |
| TAAACATCTATGTCATTTCC+TGG | 0.342214 | 8.1:-66006356 | None:intergenic |
| CTTTCAATAATAGATGCTTC+TGG | 0.350454 | 8.1:-66007508 | None:intergenic |
| TCTTCCTTCCATGTTTCAAT+TGG | 0.354245 | 8.1:-66006580 | None:intergenic |
| AAGGAGTCTCAGAAATATCT+AGG | 0.357786 | 8.1:-66008320 | None:intergenic |
| TGTCTTCCAGTTAATGCTTT+CGG | 0.358476 | 8.1:-66006698 | None:intergenic |
| AAAATTATACCAAATGGATA+TGG | 0.360178 | 8.1:+66005478 | MS.gene056168:CDS |
| CAAGTTATGACATCAAATTT+AGG | 0.368859 | 8.1:-66007883 | None:intergenic |
| TGGGATCATTGATGAGATTT+GGG | 0.370488 | 8.1:+66008059 | MS.gene056168:CDS |
| TCCTTCCATGTTTCAATTGG+TGG | 0.371412 | 8.1:-66006577 | None:intergenic |
| TGAAGACTTAAAATTACTTT+GGG | 0.372750 | 8.1:+66006394 | MS.gene056168:CDS |
| TGGCATCCATACCTTACTTT+GGG | 0.374022 | 8.1:+66008040 | MS.gene056168:CDS |
| TTGAAGACTTAAAATTACTT+TGG | 0.377491 | 8.1:+66006393 | MS.gene056168:CDS |
| TGTCATTTCCTGGTTTCTTA+GGG | 0.379467 | 8.1:-66006346 | None:intergenic |
| AAGAGAGTGAACAGACAAAT+TGG | 0.383154 | 8.1:+66008779 | MS.gene056168:CDS |
| TGATGAATTTGGTTCTAAAC+TGG | 0.384735 | 8.1:+66008155 | MS.gene056168:CDS |
| ATGGCATCCATACCTTACTT+TGG | 0.384810 | 8.1:+66008039 | MS.gene056168:CDS |
| AAAGGAAGTCGATGTTGATA+TGG | 0.389278 | 8.1:+66005539 | MS.gene056168:CDS |
| GGTACAATATACAATCATTT+GGG | 0.391552 | 8.1:-66005875 | None:intergenic |
| CTTCCCTCATGACGAGACTT+TGG | 0.392928 | 8.1:-66007598 | None:intergenic |
| ATGACTTATATCCAGAATTC+GGG | 0.396174 | 8.1:+66006156 | MS.gene056168:CDS |
| ATTGCTCCGAAAGCATTAAC+TGG | 0.396648 | 8.1:+66006692 | MS.gene056168:CDS |
| ATGTCCCTTAACACTATAAC+CGG | 0.398973 | 8.1:-66006519 | None:intergenic |
| TCAGTATTCTGGTGGATCAT+TGG | 0.399519 | 8.1:+66009173 | MS.gene056168:CDS |
| AATGTTTGTGATAGTGTAGT+TGG | 0.405117 | 8.1:+66006881 | MS.gene056168:CDS |
| GTCCATTGATCGAAGTCAAT+TGG | 0.409724 | 8.1:-66009082 | None:intergenic |
| GTCCTCCTGCGAAGGTGTTA+TGG | 0.410335 | 8.1:+66005994 | MS.gene056168:CDS |
| CCTGCATATGGGAACTTGTC+CGG | 0.411822 | 8.1:+66006500 | MS.gene056168:CDS |
| CAGTATTCTGGTGGATCATT+GGG | 0.412268 | 8.1:+66009174 | MS.gene056168:CDS |
| TTTGCCAAAATTATACCAAA+TGG | 0.416858 | 8.1:+66005472 | MS.gene056168:CDS |
| CAAAGAAGAGCCTTTGTGTC+CGG | 0.420348 | 8.1:+66005647 | MS.gene056168:CDS |
| ATGTCAGACGCAGCAGCAAT+AGG | 0.424210 | 8.1:+66007571 | MS.gene056168:CDS |
| GCTCTATTATTAGCTCGAAA+TGG | 0.430888 | 8.1:-66005431 | None:intergenic |
| GAGGAAATGATTCGTGATAT+CGG | 0.434812 | 8.1:+66005576 | MS.gene056168:CDS |
| TAAGTAGTAACCATAGTTCA+TGG | 0.435559 | 8.1:+66006240 | MS.gene056168:CDS |
| TTCACCATGCCATATCCATT+TGG | 0.438191 | 8.1:-66005487 | None:intergenic |
| TGAGCGTTCATCTCACTTTG+TGG | 0.441617 | 8.1:-66008914 | None:intergenic |
| TCTTGAAATAATCACGAGAA+TGG | 0.443508 | 8.1:-66006442 | None:intergenic |
| CTTGTCCGGTTATAGTGTTA+AGG | 0.443556 | 8.1:+66006514 | MS.gene056168:CDS |
| ATAACAAGACTTTCCTAAAG+TGG | 0.444165 | 8.1:+66007797 | MS.gene056168:CDS |
| GCAAACAATCGCTTAAGTCT+TGG | 0.446113 | 8.1:-66006032 | None:intergenic |
| TTGTCCGGTTATAGTGTTAA+GGG | 0.447981 | 8.1:+66006515 | MS.gene056168:CDS |
| GGAGAACGGGCCATGAACTA+TGG | 0.449188 | 8.1:-66006250 | None:intergenic |
| CTATTCACCCTCTTATTGGC+AGG | 0.449257 | 8.1:-66008866 | None:intergenic |
| TTGGGCAATGTGTTACCTTC+CGG | 0.451451 | 8.1:-66005786 | None:intergenic |
| CTAAATTTGATGTCATAACT+TGG | 0.454696 | 8.1:+66007884 | MS.gene056168:CDS |
| AAGAGGATGAATAGACAAAC+TGG | 0.456800 | 8.1:+66008707 | MS.gene056168:CDS |
| TGAGCATTCTTATCGCTTTG+TGG | 0.461839 | 8.1:-66008674 | None:intergenic |
| TCGCTTTGTGGAGGAGCTGA+TGG | 0.461942 | 8.1:-66008662 | None:intergenic |
| ACAGATGGAATGAATCCGTT+TGG | 0.464141 | 8.1:+66006212 | MS.gene056168:CDS |
| GCGCTTGTTGAAAAGACTCT+TGG | 0.465283 | 8.1:-66005599 | None:intergenic |
| TGAGGGAAGATGTGCAGGTA+AGG | 0.465671 | 8.1:+66007612 | MS.gene056168:CDS |
| TGGGGTGATGGTGGTAGCTG+AGG | 0.466010 | 8.1:+66007978 | MS.gene056168:CDS |
| TTGCGCTTCATGCAAATTGA+AGG | 0.466068 | 8.1:-66006293 | None:intergenic |
| CTTGAAATAATCACGAGAAT+GGG | 0.466917 | 8.1:-66006441 | None:intergenic |
| TAAGGTATGGATGCCATAAT+CGG | 0.467040 | 8.1:-66008033 | None:intergenic |
| ATGGATATGGCATGGTGAAT+CGG | 0.467400 | 8.1:+66005491 | MS.gene056168:CDS |
| TAGAAGCAAAGTCAGTATTC+TGG | 0.471008 | 8.1:+66009162 | MS.gene056168:CDS |
| GGAAAGAGAAAAGAAACCTT+AGG | 0.471739 | 8.1:+66006177 | MS.gene056168:CDS |
| CTTAGCCGCATAGTTACGAT+TGG | 0.474621 | 8.1:-66005805 | None:intergenic |
| TTAAAATTACTTTGGGAGGA+AGG | 0.474713 | 8.1:+66006401 | MS.gene056168:CDS |
| CAAGATCTGGGAAGATATCA+TGG | 0.475188 | 8.1:+66009222 | MS.gene056168:CDS |
| AAAGAAGAGCCTTTGTGTCC+GGG | 0.478073 | 8.1:+66005648 | MS.gene056168:CDS |
| AAGAGGGTGAATAGAGTCAT+TGG | 0.484806 | 8.1:+66008875 | MS.gene056168:CDS |
| GTTTGTTTACCGTCTGGCCG+TGG | 0.485787 | 8.1:-66006992 | None:intergenic |
| AAACATTGAAGAAGTGTCCT+AGG | 0.489958 | 8.1:+66005910 | MS.gene056168:CDS |
| GAGAAAAGAAACCTTAGGCT+TGG | 0.491855 | 8.1:+66006182 | MS.gene056168:CDS |
| TAAACTGGTGGACCTTGAAA+AGG | 0.493978 | 8.1:+66008170 | MS.gene056168:CDS |
| TTTGATGTCATAACTTGGAC+TGG | 0.494016 | 8.1:+66007889 | MS.gene056168:CDS |
| GATATTGTGTCCGATGGGTA+TGG | 0.494138 | 8.1:+66005830 | MS.gene056168:CDS |
| AGACAATTTACCTTGGACAT+AGG | 0.494620 | 8.1:+66006600 | MS.gene056168:CDS |
| ATATGCAGCCTGCCAATAAG+AGG | 0.495120 | 8.1:+66008858 | MS.gene056168:CDS |
| TTGTAGATAACTAGGAGAAC+GGG | 0.496315 | 8.1:-66006263 | None:intergenic |
| TTCATTCTCTACAAAGACTC+AGG | 0.500324 | 8.1:+66007930 | MS.gene056168:CDS |
| GAGACTCCTTCTTTCTCGCA+AGG | 0.501664 | 8.1:+66008333 | MS.gene056168:CDS |
| TAGAGCATCTTATTTGTCAC+GGG | 0.501671 | 8.1:+66005448 | MS.gene056168:CDS |
| ATATGCAGGAAAATCATTGA+TGG | 0.502203 | 8.1:-66006486 | None:intergenic |
| GAATCGGCAAACAATTTAAG+TGG | 0.502757 | 8.1:+66005507 | MS.gene056168:CDS |
| TGCTTGTGATGCAAGAATGA+AGG | 0.502771 | 8.1:-66008211 | None:intergenic |
| GAGGCAGATTGTAGATAACT+AGG | 0.503639 | 8.1:-66006271 | None:intergenic |
| TACCAATTGACTTCGATCAA+TGG | 0.505110 | 8.1:+66009080 | MS.gene056168:CDS |
| CGTCATGAGGGAAGATGTGC+AGG | 0.507336 | 8.1:+66007607 | MS.gene056168:CDS |
| TTAGCCGCATAGTTACGATT+GGG | 0.511936 | 8.1:-66005804 | None:intergenic |
| TTACTACTTAAGTTTCCAAA+CGG | 0.518965 | 8.1:-66006227 | None:intergenic |
| CTTAGGGCCTGAAATCATCA+TGG | 0.520712 | 8.1:-66006330 | None:intergenic |
| TCATCAATGATCCCAAAGTA+AGG | 0.521038 | 8.1:-66008051 | None:intergenic |
| AAGGTGTCAATGTTACATTA+GGG | 0.522651 | 8.1:+66006738 | MS.gene056168:CDS |
| AATGATCCCAAAGTAAGGTA+TGG | 0.523078 | 8.1:-66008046 | None:intergenic |
| AGGTTTAAAACTTAAAGCCA+TGG | 0.524249 | 8.1:+66007639 | MS.gene056168:CDS |
| GGTTTAAAACTTAAAGCCAT+GGG | 0.524478 | 8.1:+66007640 | MS.gene056168:CDS |
| ATCCGGCTGATTCTTTGCAA+TGG | 0.527929 | 8.1:+66006123 | MS.gene056168:CDS |
| AGGCTTGGACTTGCTACAGA+TGG | 0.529062 | 8.1:+66006197 | MS.gene056168:CDS |
| CCGGACAAGTTCCCATATGC+AGG | 0.529307 | 8.1:-66006500 | None:intergenic |
| GGGGTGATGGTGGTAGCTGA+GGG | 0.529883 | 8.1:+66007979 | MS.gene056168:CDS |
| GCATTCTTCTCGCTTTGTTG+AGG | 0.531057 | 8.1:-66008815 | None:intergenic |
| ACTTTATGAGCAGCAAGGTA+AGG | 0.534775 | 8.1:-66007721 | None:intergenic |
| TTCTTATACTCCATACCCAT+CGG | 0.536735 | 8.1:-66005840 | None:intergenic |
| TGATGGGTATCTTCGTCATC+CGG | 0.536786 | 8.1:+66006106 | MS.gene056168:CDS |
| TAAGAAGATATTGTGTCCGA+TGG | 0.537311 | 8.1:+66005824 | MS.gene056168:CDS |
| ACTGACTTTGCTTCTAGCAA+TGG | 0.537660 | 8.1:-66009155 | None:intergenic |
| TCGTCTAGATATGCTTGAGA+TGG | 0.542977 | 8.1:+66006949 | MS.gene056168:CDS |
| GTTATCCCTTGCGAGAAAGA+AGG | 0.544252 | 8.1:-66008339 | None:intergenic |
| TTCCATTGCAAAGAATCAGC+CGG | 0.548282 | 8.1:-66006125 | None:intergenic |
| ATAGAGCATCTTATTTGTCA+CGG | 0.550807 | 8.1:+66005447 | MS.gene056168:CDS |
| CTGTAGCAAGTCCAAGCCTA+AGG | 0.557544 | 8.1:-66006193 | None:intergenic |
| AGATACCATAACACCTTCGC+AGG | 0.558844 | 8.1:-66005999 | None:intergenic |
| CTCAAAGCGTCCTCCTGCGA+AGG | 0.567567 | 8.1:+66005986 | MS.gene056168:CDS |
| TGAAGAAGTGTCCTAGGTGT+GGG | 0.569312 | 8.1:+66005916 | MS.gene056168:CDS |
| CCTTGTGTTGAATGTTTCAA+CGG | 0.569425 | 8.1:+66005400 | None:intergenic |
| ATTATTAGCTCGAAATGGAA+TGG | 0.569830 | 8.1:-66005426 | None:intergenic |
| AGAGTGCATTTCAAAACAGT+GGG | 0.572034 | 8.1:+66007959 | MS.gene056168:CDS |
| AGACTTAAAATTACTTTGGG+AGG | 0.572735 | 8.1:+66006397 | MS.gene056168:CDS |
| GCTTGTGATGCAAGAATGAA+GGG | 0.572840 | 8.1:-66008210 | None:intergenic |
| AGTTAGAGGTGCAACGCGAA+TGG | 0.572960 | 8.1:+66009021 | MS.gene056168:CDS |
| CGCTTCATGCAAATTGAAGG+AGG | 0.572972 | 8.1:-66006290 | None:intergenic |
| AAGTACTTCCTCACGCCCCA+TGG | 0.574704 | 8.1:-66007656 | None:intergenic |
| AGATGTGCAGGTAAGGGTCG+AGG | 0.576268 | 8.1:+66007619 | MS.gene056168:CDS |
| GAGGGAAGATGTGCAGGTAA+GGG | 0.579806 | 8.1:+66007613 | MS.gene056168:CDS |
| AGACTCCTTCTTTCTCGCAA+GGG | 0.580855 | 8.1:+66008334 | MS.gene056168:CDS |
| ACATCTAGTCTAGACCAGTA+AGG | 0.583699 | 8.1:-66006824 | None:intergenic |
| AAGCAAAGTCAGTATTCTGG+TGG | 0.584306 | 8.1:+66009165 | MS.gene056168:CDS |
| GGAAGGAAGACAATTTACCT+TGG | 0.584889 | 8.1:+66006593 | MS.gene056168:CDS |
| AGGAGTCTCAGAAATATCTA+GGG | 0.587040 | 8.1:-66008319 | None:intergenic |
| TGAATTTGGTTCTAAACTGG+TGG | 0.587377 | 8.1:+66008158 | MS.gene056168:CDS |
| TTGAAGAAGTGTCCTAGGTG+TGG | 0.587390 | 8.1:+66005915 | MS.gene056168:CDS |
| CGTCTAGATATGCTTGAGAT+GGG | 0.589040 | 8.1:+66006950 | MS.gene056168:CDS |
| TCAAAACAGTGGGGTGATGG+TGG | 0.589207 | 8.1:+66007969 | MS.gene056168:CDS |
| ATTTCAAAACAGTGGGGTGA+TGG | 0.590120 | 8.1:+66007966 | MS.gene056168:CDS |
| TTCAACTTGAAAGCAAGACA+TGG | 0.592637 | 8.1:+66005711 | MS.gene056168:CDS |
| ATTGTAGATAACTAGGAGAA+CGG | 0.595193 | 8.1:-66006264 | None:intergenic |
| ACTTAAAGCCATGGGGCGTG+AGG | 0.597247 | 8.1:+66007648 | MS.gene056168:CDS |
| GTATTATTCTCTACGTGTTG+AGG | 0.599097 | 8.1:-66008743 | None:intergenic |
| GCGTTCATCTCACTTTGTGG+AGG | 0.599871 | 8.1:-66008911 | None:intergenic |
| ACTTGAAAGCAAGACATGGA+TGG | 0.601418 | 8.1:+66005715 | MS.gene056168:CDS |
| AATTCCAAAGTCTCGTCATG+AGG | 0.601495 | 8.1:+66007594 | MS.gene056168:CDS |
| ATAGTCAGAAGACCACTCAA+TGG | 0.603817 | 8.1:-66007548 | None:intergenic |
| AAGAAGAGCCTTTGTGTCCG+GGG | 0.604734 | 8.1:+66005649 | MS.gene056168:CDS |
| AAACATGTCACTGTTGGCTG+CGG | 0.606423 | 8.1:+66005677 | MS.gene056168:CDS |
| CAATAATAGATGCTTCTGGA+CGG | 0.606638 | 8.1:-66007504 | None:intergenic |
| CAGATGAGAGGAAACGTGAT+GGG | 0.607075 | 8.1:+66006090 | MS.gene056168:CDS |
| GAAGTCGATGTTGATATGGA+TGG | 0.607292 | 8.1:+66005543 | MS.gene056168:CDS |
| GCATTCTTATCGCTTTGTGG+AGG | 0.610687 | 8.1:-66008671 | None:intergenic |
| TGAGAAATCTCCTATGTCCA+AGG | 0.611130 | 8.1:-66006610 | None:intergenic |
| TGCTCATAAAGTCATTGTCA+AGG | 0.614422 | 8.1:+66007732 | MS.gene056168:CDS |
| CAATTAGCTCCACGGCCAGA+CGG | 0.615446 | 8.1:+66006983 | MS.gene056168:CDS |
| TAATATGGCATGCAGATGAG+AGG | 0.615696 | 8.1:+66006078 | MS.gene056168:CDS |
| TATACCAAATGGATATGGCA+TGG | 0.616386 | 8.1:+66005483 | MS.gene056168:CDS |
| AAGTGGTCAGTGGTTCTCCA+AGG | 0.618977 | 8.1:+66008270 | MS.gene056168:CDS |
| ATTCCAAAGTCTCGTCATGA+GGG | 0.619759 | 8.1:+66007595 | MS.gene056168:CDS |
| AAGAAGATATTGTGTCCGAT+GGG | 0.622073 | 8.1:+66005825 | MS.gene056168:CDS |
| TATGCAGCCTGCCAATAAGA+GGG | 0.626438 | 8.1:+66008859 | MS.gene056168:CDS |
| TTGAAAGAAATGCTGCCGGA+AGG | 0.629950 | 8.1:+66005771 | MS.gene056168:CDS |
| GTGCACAAACATGTCACTGT+TGG | 0.631044 | 8.1:+66005671 | MS.gene056168:CDS |
| ATTTCAGGCCCTAAGAAACC+AGG | 0.631444 | 8.1:+66006338 | MS.gene056168:CDS |
| TGTGTTGAATGTTTCAACGG+AGG | 0.631483 | 8.1:+66005403 | None:intergenic |
| TACCATAACACCTTCGCAGG+AGG | 0.632223 | 8.1:-66005996 | None:intergenic |
| ACCACCAATTGAAACATGGA+AGG | 0.635141 | 8.1:+66006576 | MS.gene056168:CDS |
| GCAGATGAGAGGAAACGTGA+TGG | 0.635357 | 8.1:+66006089 | MS.gene056168:CDS |
| TATGGATGGTTATCAGCTAG+AGG | 0.635735 | 8.1:+66005557 | MS.gene056168:CDS |
| AATCGGCAAACAATTTAAGT+GGG | 0.637798 | 8.1:+66005508 | MS.gene056168:CDS |
| CAATGACTTTATGAGCAGCA+AGG | 0.642304 | 8.1:-66007726 | None:intergenic |
| AAGAGTGCATTTCAAAACAG+TGG | 0.642828 | 8.1:+66007958 | MS.gene056168:CDS |
| AACTGAATCACCCATATCGT+AGG | 0.643663 | 8.1:+66006633 | MS.gene056168:CDS |
| ACAAAGGCTCTTCTTTGTCA+CGG | 0.645190 | 8.1:-66005641 | None:intergenic |
| TTTGTGCACCCCGGACACAA+AGG | 0.646804 | 8.1:-66005657 | None:intergenic |
| TGCTACCACCAATTGAAACA+TGG | 0.653735 | 8.1:+66006572 | MS.gene056168:CDS |
| TTGCAGAAGAAGCCATTGAG+TGG | 0.654865 | 8.1:+66007536 | MS.gene056168:CDS |
| TCAATTAAAATGGCTAGCAG+AGG | 0.655259 | 8.1:+66007858 | MS.gene056168:CDS |
| GCTGTTGAAAGAAATGCTGC+CGG | 0.657697 | 8.1:+66005767 | MS.gene056168:CDS |
| AAGTGGATTGCCATAAACAG+TGG | 0.658882 | 8.1:+66008123 | MS.gene056168:CDS |
| AGTGACATGTTTGTGCACCC+CGG | 0.663226 | 8.1:-66005666 | None:intergenic |
| TAAGACAACAATTAGCTCCA+CGG | 0.667093 | 8.1:+66006975 | MS.gene056168:CDS |
| GCTATCACGCTACAAAGTGA+AGG | 0.677966 | 8.1:+66005938 | MS.gene056168:CDS |
| TAGCGTGATAGCCCACACCT+AGG | 0.685024 | 8.1:-66005927 | None:intergenic |
| GTTTAAAACTTAAAGCCATG+GGG | 0.721097 | 8.1:+66007641 | MS.gene056168:CDS |
| TATATTGAATAACACTGACG+AGG | 0.751314 | 8.1:+66007693 | MS.gene056168:CDS |
| ATTGCCCAATCGTAACTATG+CGG | 0.753093 | 8.1:+66005800 | MS.gene056168:CDS |
| GAGTGCATTTCAAAACAGTG+GGG | 0.777176 | 8.1:+66007960 | MS.gene056168:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTACTTTCAAAT+TGG | + | chr8.1:66008595-66008614 | MS.gene056168:intron | 10.0% |
| !! | AAAAAAATTCAAAAGTCATG+TGG | + | chr8.1:66009129-66009148 | MS.gene056168:CDS | 20.0% |
| !! | AAAAAATTCAAAAGTCATGT+GGG | + | chr8.1:66009130-66009149 | MS.gene056168:CDS | 20.0% |
| !! | AAAATTATACCAAATGGATA+TGG | + | chr8.1:66005478-66005497 | MS.gene056168:CDS | 20.0% |
| !! | ATTAATGGAAAAACAAAAGA+TGG | + | chr8.1:66006917-66006936 | MS.gene056168:CDS | 20.0% |
| !! | GTGATGCAAAAAATTTAATA+TGG | + | chr8.1:66006063-66006082 | MS.gene056168:CDS | 20.0% |
| !! | TCCTAAAAAATTAGATGAAT+TGG | + | chr8.1:66007294-66007313 | MS.gene056168:intron | 20.0% |
| !! | TGAAGACTTAAAATTACTTT+GGG | + | chr8.1:66006394-66006413 | MS.gene056168:CDS | 20.0% |
| !! | TTGAAGACTTAAAATTACTT+TGG | + | chr8.1:66006393-66006412 | MS.gene056168:CDS | 20.0% |
| !!! | AATTTTAAGTCTTCAATCAA+TGG | - | chr8.1:66006389-66006408 | None:intergenic | 20.0% |
| !!! | ATATCCATTTGGTATAATTT+TGG | - | chr8.1:66005479-66005498 | None:intergenic | 20.0% |
| !!! | ATTTTTATATTACAGACTCA+TGG | + | chr8.1:66008634-66008653 | MS.gene056168:intron | 20.0% |
| !!! | GATACATGAAAATTTTGAAA+GGG | + | chr8.1:66007464-66007483 | MS.gene056168:intron | 20.0% |
| !!! | TCCAATTCATCTAATTTTTT+AGG | - | chr8.1:66007298-66007317 | None:intergenic | 20.0% |
| !!! | TTTTTATATTACAGACTCAT+GGG | + | chr8.1:66008635-66008654 | MS.gene056168:intron | 20.0% |
| ! | AAAAGATCAAAATCCGATTA+TGG | + | chr8.1:66008020-66008039 | MS.gene056168:CDS | 25.0% |
| ! | AAAATGAAAGTTACCAGATA+TGG | - | chr8.1:66008475-66008494 | None:intergenic | 25.0% |
| ! | AGAAAAATATATGGAAGAAG+AGG | + | chr8.1:66006783-66006802 | MS.gene056168:CDS | 25.0% |
| ! | AGAATGTTAAAAACAAGATC+TGG | + | chr8.1:66009209-66009228 | MS.gene056168:CDS | 25.0% |
| ! | AGTCTGTTGAGAAAAATATA+TGG | + | chr8.1:66006774-66006793 | MS.gene056168:CDS | 25.0% |
| ! | ATCCACTTACATTTAAAAAC+AGG | - | chr8.1:66008111-66008130 | None:intergenic | 25.0% |
| ! | ATCCTAGAATGAATGAAAAA+TGG | + | chr8.1:66007761-66007780 | MS.gene056168:CDS | 25.0% |
| ! | ATTAGATGAATTGGAAAATG+AGG | + | chr8.1:66007303-66007322 | MS.gene056168:intron | 25.0% |
| ! | CAAGTTATGACATCAAATTT+AGG | - | chr8.1:66007886-66007905 | None:intergenic | 25.0% |
| ! | CTAAATTTGATGTCATAACT+TGG | + | chr8.1:66007884-66007903 | MS.gene056168:CDS | 25.0% |
| ! | GAATGTTAAAAACAAGATCT+GGG | + | chr8.1:66009210-66009229 | MS.gene056168:CDS | 25.0% |
| ! | GGTACAATATACAATCATTT+GGG | - | chr8.1:66005878-66005897 | None:intergenic | 25.0% |
| ! | TCAATGTTTCAAACTCATTT+CGG | - | chr8.1:66005899-66005918 | None:intergenic | 25.0% |
| ! | TTACTACTTAAGTTTCCAAA+CGG | - | chr8.1:66006230-66006249 | None:intergenic | 25.0% |
| ! | TTAGATGAATTGGAAAATGA+GGG | + | chr8.1:66007304-66007323 | MS.gene056168:intron | 25.0% |
| ! | TTGAAAGATTCGAAACTAAT+TGG | + | chr8.1:66007133-66007152 | MS.gene056168:intron | 25.0% |
| ! | TTTGCCAAAATTATACCAAA+TGG | + | chr8.1:66005472-66005491 | MS.gene056168:CDS | 25.0% |
| !! | AGCTGTATTGTCATTTAAAA+TGG | - | chr8.1:66007833-66007852 | None:intergenic | 25.0% |
| !! | CAAGTTTTTAAACAGTTGAA+AGG | + | chr8.1:66006719-66006738 | MS.gene056168:CDS | 25.0% |
| !! | CGATACATGAAAATTTTGAA+AGG | + | chr8.1:66007463-66007482 | MS.gene056168:intron | 25.0% |
| !! | TTTTTGCTTAAACGTTTGAA+TGG | + | chr8.1:66009049-66009068 | MS.gene056168:CDS | 25.0% |
| !!! | AAAATAGTTCTAACCATATC+TGG | + | chr8.1:66008459-66008478 | MS.gene056168:intron | 25.0% |
| !!! | AAGACATCTCTAACTTTTTT+CGG | - | chr8.1:66007226-66007245 | None:intergenic | 25.0% |
| AAGTTAGAGATGTCTTAACT+AGG | + | chr8.1:66007230-66007249 | MS.gene056168:intron | 30.0% | |
| AATCGGCAAACAATTTAAGT+GGG | + | chr8.1:66005508-66005527 | MS.gene056168:CDS | 30.0% | |
| ACCATGATGTCAAAAAATGA+AGG | - | chr8.1:66007367-66007386 | None:intergenic | 30.0% | |
| AGACTTAAAATTACTTTGGG+AGG | + | chr8.1:66006397-66006416 | MS.gene056168:CDS | 30.0% | |
| ATAACAAGACTTTCCTAAAG+TGG | + | chr8.1:66007797-66007816 | MS.gene056168:CDS | 30.0% | |
| ATATGCAGGAAAATCATTGA+TGG | - | chr8.1:66006489-66006508 | None:intergenic | 30.0% | |
| ATGACTTATATCCAGAATTC+GGG | + | chr8.1:66006156-66006175 | MS.gene056168:CDS | 30.0% | |
| ATGATCATAATGAAGGGATA+TGG | + | chr8.1:66008409-66008428 | MS.gene056168:intron | 30.0% | |
| ATGATGTCAAAAAATGAAGG+AGG | - | chr8.1:66007364-66007383 | None:intergenic | 30.0% | |
| ATGTTATCCATGATGATTTC+AGG | + | chr8.1:66006323-66006342 | MS.gene056168:CDS | 30.0% | |
| ATTATTAGCTCGAAATGGAA+TGG | - | chr8.1:66005429-66005448 | None:intergenic | 30.0% | |
| ATTGTAGATAACTAGGAGAA+CGG | - | chr8.1:66006267-66006286 | None:intergenic | 30.0% | |
| CAGCTTCTGTTCAATTAAAA+TGG | + | chr8.1:66007848-66007867 | MS.gene056168:CDS | 30.0% | |
| CGGTACAATATACAATCATT+TGG | - | chr8.1:66005879-66005898 | None:intergenic | 30.0% | |
| CTTGAAATAATCACGAGAAT+GGG | - | chr8.1:66006444-66006463 | None:intergenic | 30.0% | |
| CTTTCAATAATAGATGCTTC+TGG | - | chr8.1:66007511-66007530 | None:intergenic | 30.0% | |
| GATGACTTATATCCAGAATT+CGG | + | chr8.1:66006155-66006174 | MS.gene056168:CDS | 30.0% | |
| GGAGTTAAAACTGATGAATT+TGG | + | chr8.1:66008144-66008163 | MS.gene056168:CDS | 30.0% | |
| TAAGTAGTAACCATAGTTCA+TGG | + | chr8.1:66006240-66006259 | MS.gene056168:CDS | 30.0% | |
| TACATCCATCTCAAATAAAC+AGG | - | chr8.1:66007433-66007452 | None:intergenic | 30.0% | |
| TATATTGAATAACACTGACG+AGG | + | chr8.1:66007693-66007712 | MS.gene056168:CDS | 30.0% | |
| TCTTGAAATAATCACGAGAA+TGG | - | chr8.1:66006445-66006464 | None:intergenic | 30.0% | |
| TGATCATAATGAAGGGATAT+GGG | + | chr8.1:66008410-66008429 | MS.gene056168:intron | 30.0% | |
| TGGTTTCTTTAAACCACTTT+AGG | - | chr8.1:66007813-66007832 | None:intergenic | 30.0% | |
| TTTAAGTGGGTCAAAAAGAA+AGG | + | chr8.1:66005521-66005540 | MS.gene056168:CDS | 30.0% | |
| ! | AAATAAGTTTGTTTACCGTC+TGG | - | chr8.1:66007001-66007020 | None:intergenic | 30.0% |
| ! | AAGGTGTCAATGTTACATTA+GGG | + | chr8.1:66006738-66006757 | MS.gene056168:CDS | 30.0% |
| ! | AATGTTTGTGATAGTGTAGT+TGG | + | chr8.1:66006881-66006900 | MS.gene056168:CDS | 30.0% |
| ! | AGGTTGAGAAAAGCTTTTAA+TGG | + | chr8.1:66006653-66006672 | MS.gene056168:CDS | 30.0% |
| ! | AGGTTTAAAACTTAAAGCCA+TGG | + | chr8.1:66007639-66007658 | MS.gene056168:CDS | 30.0% |
| ! | ATAGAGCATCTTATTTGTCA+CGG | + | chr8.1:66005447-66005466 | MS.gene056168:CDS | 30.0% |
| ! | ATCAATGATTTTCCTGCATA+TGG | + | chr8.1:66006488-66006507 | MS.gene056168:CDS | 30.0% |
| ! | ATTTTCATGTATCGTTCAAC+TGG | - | chr8.1:66007457-66007476 | None:intergenic | 30.0% |
| ! | CAAGTGTGTTTTTCACATAT+AGG | - | chr8.1:66006554-66006573 | None:intergenic | 30.0% |
| ! | GGTTTAAAACTTAAAGCCAT+GGG | + | chr8.1:66007640-66007659 | MS.gene056168:CDS | 30.0% |
| ! | GTTTAAAACTTAAAGCCATG+GGG | + | chr8.1:66007641-66007660 | MS.gene056168:CDS | 30.0% |
| ! | TAAACATCTATGTCATTTCC+TGG | - | chr8.1:66006359-66006378 | None:intergenic | 30.0% |
| ! | TCAATGATTTTCCTGCATAT+GGG | + | chr8.1:66006489-66006508 | MS.gene056168:CDS | 30.0% |
| ! | TGAGTAATTTTCTCAGTTTG+TGG | - | chr8.1:66008986-66009005 | None:intergenic | 30.0% |
| ! | TTAAAATTACTTTGGGAGGA+AGG | + | chr8.1:66006401-66006420 | MS.gene056168:CDS | 30.0% |
| ! | TTGTCTATTCATCCTCTTTT+TGG | - | chr8.1:66008705-66008724 | None:intergenic | 30.0% |
| !! | AAAGGTGTCAATGTTACATT+AGG | + | chr8.1:66006737-66006756 | MS.gene056168:CDS | 30.0% |
| !! | CATAATATAAAAGTGCCACA+AGG | + | chr8.1:66007079-66007098 | MS.gene056168:intron | 30.0% |
| !! | TATCATGCATGTTTTTACCT+TGG | - | chr8.1:66008290-66008309 | None:intergenic | 30.0% |
| !! | TGATGAATTTGGTTCTAAAC+TGG | + | chr8.1:66008155-66008174 | MS.gene056168:CDS | 30.0% |
| !!! | AGCCATTTTTCATTCATTCT+AGG | - | chr8.1:66007766-66007785 | None:intergenic | 30.0% |
| !!! | AGTTTTAACTCCACTGTTTA+TGG | - | chr8.1:66008136-66008155 | None:intergenic | 30.0% |
| !!! | TCCTTCATTTTTTGACATCA+TGG | + | chr8.1:66007363-66007382 | MS.gene056168:intron | 30.0% |
| !!! | TGCCTGTTTTTAAATGTAAG+TGG | + | chr8.1:66008106-66008125 | MS.gene056168:CDS | 30.0% |
| !!! | TGTTTTTTGATCTTCCTTAC+TGG | + | chr8.1:66006810-66006829 | MS.gene056168:CDS | 30.0% |
| !!! | TTTTTTCTGTTTTCCCCTAA+AGG | - | chr8.1:66009115-66009134 | None:intergenic | 30.0% |
| AAAGGAAGTCGATGTTGATA+TGG | + | chr8.1:66005539-66005558 | MS.gene056168:CDS | 35.0% | |
| AAGAAGATATTGTGTCCGAT+GGG | + | chr8.1:66005825-66005844 | MS.gene056168:CDS | 35.0% | |
| AAGAGAGTGAACAGACAAAT+TGG | + | chr8.1:66008779-66008798 | MS.gene056168:CDS | 35.0% | |
| AAGAGGATGAATAGACAAAC+TGG | + | chr8.1:66008707-66008726 | MS.gene056168:CDS | 35.0% | |
| AAGGAGTCTCAGAAATATCT+AGG | - | chr8.1:66008323-66008342 | None:intergenic | 35.0% | |
| AATGATCCCAAAGTAAGGTA+TGG | - | chr8.1:66008049-66008068 | None:intergenic | 35.0% | |
| AATGGACCAAAAAGCCTTTA+GGG | + | chr8.1:66009098-66009117 | MS.gene056168:CDS | 35.0% | |
| ACATTTGAACAGTAACCTTG+TGG | - | chr8.1:66007097-66007116 | None:intergenic | 35.0% | |
| ACTCGTGATGATCATAATGA+AGG | + | chr8.1:66008402-66008421 | MS.gene056168:intron | 35.0% | |
| AGACAATTTACCTTGGACAT+AGG | + | chr8.1:66006600-66006619 | MS.gene056168:CDS | 35.0% | |
| AGAGTGCATTTCAAAACAGT+GGG | + | chr8.1:66007959-66007978 | MS.gene056168:CDS | 35.0% | |
| AGGAGTCTCAGAAATATCTA+GGG | - | chr8.1:66008322-66008341 | None:intergenic | 35.0% | |
| ATCTCATGATTGCCATATGT+TGG | + | chr8.1:66007162-66007181 | MS.gene056168:intron | 35.0% | |
| ATGTCCCTTAACACTATAAC+CGG | - | chr8.1:66006522-66006541 | None:intergenic | 35.0% | |
| CAATAATAGATGCTTCTGGA+CGG | - | chr8.1:66007507-66007526 | None:intergenic | 35.0% | |
| CGCTTAAGTCTTGGAATTAT+TGG | - | chr8.1:66006026-66006045 | None:intergenic | 35.0% | |
| CTCGTGATGATCATAATGAA+GGG | + | chr8.1:66008403-66008422 | MS.gene056168:intron | 35.0% | |
| GAATCGGCAAACAATTTAAG+TGG | + | chr8.1:66005507-66005526 | MS.gene056168:CDS | 35.0% | |
| GAGGAAAATACATCTCAAGT+TGG | - | chr8.1:66007345-66007364 | None:intergenic | 35.0% | |
| GAGGAAATGATTCGTGATAT+CGG | + | chr8.1:66005576-66005595 | MS.gene056168:CDS | 35.0% | |
| GCTCTATTATTAGCTCGAAA+TGG | - | chr8.1:66005434-66005453 | None:intergenic | 35.0% | |
| GGAAAGAGAAAAGAAACCTT+AGG | + | chr8.1:66006177-66006196 | MS.gene056168:CDS | 35.0% | |
| GGAACACTTCTCAACATTAA+TGG | + | chr8.1:66006902-66006921 | MS.gene056168:CDS | 35.0% | |
| GTATTATTCTCTACGTGTTG+AGG | - | chr8.1:66008746-66008765 | None:intergenic | 35.0% | |
| TAAGAAGATATTGTGTCCGA+TGG | + | chr8.1:66005824-66005843 | MS.gene056168:CDS | 35.0% | |
| TAAGACAACAATTAGCTCCA+CGG | + | chr8.1:66006975-66006994 | MS.gene056168:CDS | 35.0% | |
| TAAGGTATGGATGCCATAAT+CGG | - | chr8.1:66008036-66008055 | None:intergenic | 35.0% | |
| TAGAAGCAAAGTCAGTATTC+TGG | + | chr8.1:66009162-66009181 | MS.gene056168:CDS | 35.0% | |
| TATACCAAATGGATATGGCA+TGG | + | chr8.1:66005483-66005502 | MS.gene056168:CDS | 35.0% | |
| TCAATTAAAATGGCTAGCAG+AGG | + | chr8.1:66007858-66007877 | MS.gene056168:CDS | 35.0% | |
| TCATCAATGATCCCAAAGTA+AGG | - | chr8.1:66008054-66008073 | None:intergenic | 35.0% | |
| TCTTCCTTCCATGTTTCAAT+TGG | - | chr8.1:66006583-66006602 | None:intergenic | 35.0% | |
| TGAATTGTTGCACCAACATA+TGG | - | chr8.1:66007177-66007196 | None:intergenic | 35.0% | |
| TGCTCATAAAGTCATTGTCA+AGG | + | chr8.1:66007732-66007751 | MS.gene056168:CDS | 35.0% | |
| TGGGATCATTGATGAGATTT+GGG | + | chr8.1:66008059-66008078 | MS.gene056168:CDS | 35.0% | |
| TGTCTTCCAGTTAATGCTTT+CGG | - | chr8.1:66006701-66006720 | None:intergenic | 35.0% | |
| TTCAACTTGAAAGCAAGACA+TGG | + | chr8.1:66005711-66005730 | MS.gene056168:CDS | 35.0% | |
| TTCATCTAGTGAGAGAGATT+AGG | + | chr8.1:66007398-66007417 | MS.gene056168:intron | 35.0% | |
| TTCATTATGATCATCACGAG+TGG | - | chr8.1:66008403-66008422 | None:intergenic | 35.0% | |
| TTCATTCTCTACAAAGACTC+AGG | + | chr8.1:66007930-66007949 | MS.gene056168:CDS | 35.0% | |
| TTCTTATACTCCATACCCAT+CGG | - | chr8.1:66005843-66005862 | None:intergenic | 35.0% | |
| TTGGGATCATTGATGAGATT+TGG | + | chr8.1:66008058-66008077 | MS.gene056168:CDS | 35.0% | |
| TTGTAGATAACTAGGAGAAC+GGG | - | chr8.1:66006266-66006285 | None:intergenic | 35.0% | |
| TTGTCCGGTTATAGTGTTAA+GGG | + | chr8.1:66006515-66006534 | MS.gene056168:CDS | 35.0% | |
| TTTGACAAAGTGTAACAAGC+TGG | - | chr8.1:66007028-66007047 | None:intergenic | 35.0% | |
| TTTGATGTCATAACTTGGAC+TGG | + | chr8.1:66007889-66007908 | MS.gene056168:CDS | 35.0% | |
| ! | AAGAGTGCATTTCAAAACAG+TGG | + | chr8.1:66007958-66007977 | MS.gene056168:CDS | 35.0% |
| ! | AGGCTGCATATTCTTCTTTT+TGG | - | chr8.1:66008849-66008868 | None:intergenic | 35.0% |
| ! | ATGTCATTTCCTGGTTTCTT+AGG | - | chr8.1:66006350-66006369 | None:intergenic | 35.0% |
| ! | CTTCAATGCTATTTGTAGCA+AGG | + | chr8.1:66007264-66007283 | MS.gene056168:intron | 35.0% |
| ! | CTTTTCTCAACCTACGATAT+GGG | - | chr8.1:66006646-66006665 | None:intergenic | 35.0% |
| ! | GTAATTTTCTCAGTTTGTGG+AGG | - | chr8.1:66008983-66009002 | None:intergenic | 35.0% |
| ! | TACCAATTGACTTCGATCAA+TGG | + | chr8.1:66009080-66009099 | MS.gene056168:CDS | 35.0% |
| ! | TAGAGCATCTTATTTGTCAC+GGG | + | chr8.1:66005448-66005467 | MS.gene056168:CDS | 35.0% |
| ! | TGTCATTTCCTGGTTTCTTA+GGG | - | chr8.1:66006349-66006368 | None:intergenic | 35.0% |
| ! | TTGTATAAGCTGCCTTTTCA+AGG | - | chr8.1:66008185-66008204 | None:intergenic | 35.0% |
| ! | TTGTCTGTTCACTCTCTTTT+TGG | - | chr8.1:66008777-66008796 | None:intergenic | 35.0% |
| !! | AAACATTGAAGAAGTGTCCT+AGG | + | chr8.1:66005910-66005929 | MS.gene056168:CDS | 35.0% |
| !! | TGAATTTGGTTCTAAACTGG+TGG | + | chr8.1:66008158-66008177 | MS.gene056168:CDS | 35.0% |
| !! | TGCATATTCTTCTTTTTGGC+AGG | - | chr8.1:66008845-66008864 | None:intergenic | 35.0% |
| !! | TTTTGGAGAGGAAACTATAG+TGG | + | chr8.1:66008365-66008384 | MS.gene056168:CDS | 35.0% |
| AACTGAATCACCCATATCGT+AGG | + | chr8.1:66006633-66006652 | MS.gene056168:CDS | 40.0% | |
| AAGAGGGTGAATAGAGTCAT+TGG | + | chr8.1:66008875-66008894 | MS.gene056168:CDS | 40.0% | |
| AAGCAAAGTCAGTATTCTGG+TGG | + | chr8.1:66009165-66009184 | MS.gene056168:CDS | 40.0% | |
| AATTCCAAAGTCTCGTCATG+AGG | + | chr8.1:66007594-66007613 | MS.gene056168:CDS | 40.0% | |
| ACAAAGGCTCTTCTTTGTCA+CGG | - | chr8.1:66005644-66005663 | None:intergenic | 40.0% | |
| ACAGATGGAATGAATCCGTT+TGG | + | chr8.1:66006212-66006231 | MS.gene056168:CDS | 40.0% | |
| ACATCTAGTCTAGACCAGTA+AGG | - | chr8.1:66006827-66006846 | None:intergenic | 40.0% | |
| ACCACCAATTGAAACATGGA+AGG | + | chr8.1:66006576-66006595 | MS.gene056168:CDS | 40.0% | |
| ACTTGAAAGCAAGACATGGA+TGG | + | chr8.1:66005715-66005734 | MS.gene056168:CDS | 40.0% | |
| ACTTTATGAGCAGCAAGGTA+AGG | - | chr8.1:66007724-66007743 | None:intergenic | 40.0% | |
| ATAGTCAGAAGACCACTCAA+TGG | - | chr8.1:66007551-66007570 | None:intergenic | 40.0% | |
| ATGGACCAAAAAGCCTTTAG+GGG | + | chr8.1:66009099-66009118 | MS.gene056168:CDS | 40.0% | |
| ATGGATATGGCATGGTGAAT+CGG | + | chr8.1:66005491-66005510 | MS.gene056168:CDS | 40.0% | |
| ATGGCATCCATACCTTACTT+TGG | + | chr8.1:66008039-66008058 | MS.gene056168:CDS | 40.0% | |
| ATTCCAAAGTCTCGTCATGA+GGG | + | chr8.1:66007595-66007614 | MS.gene056168:CDS | 40.0% | |
| ATTGCCCAATCGTAACTATG+CGG | + | chr8.1:66005800-66005819 | MS.gene056168:CDS | 40.0% | |
| ATTTCAAAACAGTGGGGTGA+TGG | + | chr8.1:66007966-66007985 | MS.gene056168:CDS | 40.0% | |
| CAATGACTTTATGAGCAGCA+AGG | - | chr8.1:66007729-66007748 | None:intergenic | 40.0% | |
| CAATGGACCAAAAAGCCTTT+AGG | + | chr8.1:66009097-66009116 | MS.gene056168:CDS | 40.0% | |
| CCTACCAAAAAGAGAGTTAG+AGG | + | chr8.1:66009007-66009026 | MS.gene056168:CDS | 40.0% | |
| CGTCTAGATATGCTTGAGAT+GGG | + | chr8.1:66006950-66006969 | MS.gene056168:CDS | 40.0% | |
| CTTGTCCGGTTATAGTGTTA+AGG | + | chr8.1:66006514-66006533 | MS.gene056168:CDS | 40.0% | |
| GAAGTCGATGTTGATATGGA+TGG | + | chr8.1:66005543-66005562 | MS.gene056168:CDS | 40.0% | |
| GACTCTATTCACCCTCTTAT+TGG | - | chr8.1:66008873-66008892 | None:intergenic | 40.0% | |
| GAGAAAAGAAACCTTAGGCT+TGG | + | chr8.1:66006182-66006201 | MS.gene056168:CDS | 40.0% | |
| GAGGCAGATTGTAGATAACT+AGG | - | chr8.1:66006274-66006293 | None:intergenic | 40.0% | |
| GAGTGCATTTCAAAACAGTG+GGG | + | chr8.1:66007960-66007979 | MS.gene056168:CDS | 40.0% | |
| GCAAACAATCGCTTAAGTCT+TGG | - | chr8.1:66006035-66006054 | None:intergenic | 40.0% | |
| GCTTGTGATGCAAGAATGAA+GGG | - | chr8.1:66008213-66008232 | None:intergenic | 40.0% | |
| GGAAGGAAGACAATTTACCT+TGG | + | chr8.1:66006593-66006612 | MS.gene056168:CDS | 40.0% | |
| GTCCATTGATCGAAGTCAAT+TGG | - | chr8.1:66009085-66009104 | None:intergenic | 40.0% | |
| GTGAGAGAGATTAGGATATG+TGG | + | chr8.1:66007406-66007425 | MS.gene056168:intron | 40.0% | |
| GTGGTCCTGTTTATTTGAGA+TGG | + | chr8.1:66007425-66007444 | MS.gene056168:intron | 40.0% | |
| GTTGGTGCAACAATTCATAC+CGG | + | chr8.1:66007180-66007199 | MS.gene056168:intron | 40.0% | |
| TAATATGGCATGCAGATGAG+AGG | + | chr8.1:66006078-66006097 | MS.gene056168:CDS | 40.0% | |
| TATGGATGGTTATCAGCTAG+AGG | + | chr8.1:66005557-66005576 | MS.gene056168:CDS | 40.0% | |
| TCCTTCCATGTTTCAATTGG+TGG | - | chr8.1:66006580-66006599 | None:intergenic | 40.0% | |
| TCGTCTAGATATGCTTGAGA+TGG | + | chr8.1:66006949-66006968 | MS.gene056168:CDS | 40.0% | |
| TGAGAAATCTCCTATGTCCA+AGG | - | chr8.1:66006613-66006632 | None:intergenic | 40.0% | |
| TGAGCATTCTTATCGCTTTG+TGG | - | chr8.1:66008677-66008696 | None:intergenic | 40.0% | |
| TGCTACCACCAATTGAAACA+TGG | + | chr8.1:66006572-66006591 | MS.gene056168:CDS | 40.0% | |
| TGCTTGTGATGCAAGAATGA+AGG | - | chr8.1:66008214-66008233 | None:intergenic | 40.0% | |
| TGGCATCCATACCTTACTTT+GGG | + | chr8.1:66008040-66008059 | MS.gene056168:CDS | 40.0% | |
| TTAGCCGCATAGTTACGATT+GGG | - | chr8.1:66005807-66005826 | None:intergenic | 40.0% | |
| TTCACCATGCCATATCCATT+TGG | - | chr8.1:66005490-66005509 | None:intergenic | 40.0% | |
| TTCCATTGCAAAGAATCAGC+CGG | - | chr8.1:66006128-66006147 | None:intergenic | 40.0% | |
| TTGCGCTTCATGCAAATTGA+AGG | - | chr8.1:66006296-66006315 | None:intergenic | 40.0% | |
| ! | ACTGACTTTGCTTCTAGCAA+TGG | - | chr8.1:66009158-66009177 | None:intergenic | 40.0% |
| ! | CAGTATTCTGGTGGATCATT+GGG | + | chr8.1:66009174-66009193 | MS.gene056168:CDS | 40.0% |
| ! | CTTTTCTCTTTCCCGAATTC+TGG | - | chr8.1:66006170-66006189 | None:intergenic | 40.0% |
| ! | GCTTTTCTCAACCTACGATA+TGG | - | chr8.1:66006647-66006666 | None:intergenic | 40.0% |
| ! | GTTTTCCCCTAAAGGCTTTT+TGG | - | chr8.1:66009107-66009126 | None:intergenic | 40.0% |
| ! | TAAACTGGTGGACCTTGAAA+AGG | + | chr8.1:66008170-66008189 | MS.gene056168:CDS | 40.0% |
| ! | TCAGTATTCTGGTGGATCAT+TGG | + | chr8.1:66009173-66009192 | MS.gene056168:CDS | 40.0% |
| ! | TCGCAAGGGATAACTACTTT+TGG | + | chr8.1:66008348-66008367 | MS.gene056168:CDS | 40.0% |
| ! | TCGGAGCAATTTTCCATTCT+GGG | - | chr8.1:66006682-66006701 | None:intergenic | 40.0% |
| ! | TGCACCTCTAACTCTCTTTT+TGG | - | chr8.1:66009014-66009033 | None:intergenic | 40.0% |
| ! | TTCGGAGCAATTTTCCATTC+TGG | - | chr8.1:66006683-66006702 | None:intergenic | 40.0% |
| !! | AAGTGGATTGCCATAAACAG+TGG | + | chr8.1:66008123-66008142 | MS.gene056168:CDS | 40.0% |
| !! | AGGGATAACTACTTTTGGAG+AGG | + | chr8.1:66008353-66008372 | MS.gene056168:CDS | 40.0% |
| !! | ATTGCTCCGAAAGCATTAAC+TGG | + | chr8.1:66006692-66006711 | MS.gene056168:CDS | 40.0% |
| !! | CCTCTAACTCTCTTTTTGGT+AGG | - | chr8.1:66009010-66009029 | None:intergenic | 40.0% |
| !! | CTATTCATCCTCTTTTTGGC+AGG | - | chr8.1:66008701-66008720 | None:intergenic | 40.0% |
| !! | CTTTTAATGGACACCCAGAA+TGG | + | chr8.1:66006666-66006685 | MS.gene056168:CDS | 40.0% |
| !!! | ACTGACCACTTTTTGCTAGA+GGG | - | chr8.1:66008261-66008280 | None:intergenic | 40.0% |
| !!! | GAGTGTGTTGACTCCATTTT+CGG | - | chr8.1:66008945-66008964 | None:intergenic | 40.0% |
| AAAGAAGAGCCTTTGTGTCC+GGG | + | chr8.1:66005648-66005667 | MS.gene056168:CDS | 45.0% | |
| AACGCTCAACCTACCGAAAA+TGG | + | chr8.1:66008929-66008948 | MS.gene056168:CDS | 45.0% | |
| AGACTCCTTCTTTCTCGCAA+GGG | + | chr8.1:66008334-66008353 | MS.gene056168:CDS | 45.0% | |
| AGATACCATAACACCTTCGC+AGG | - | chr8.1:66006002-66006021 | None:intergenic | 45.0% | |
| ATATGCAGCCTGCCAATAAG+AGG | + | chr8.1:66008858-66008877 | MS.gene056168:CDS | 45.0% | |
| ATTTCAGGCCCTAAGAAACC+AGG | + | chr8.1:66006338-66006357 | MS.gene056168:CDS | 45.0% | |
| CAAAGAAGAGCCTTTGTGTC+CGG | + | chr8.1:66005647-66005666 | MS.gene056168:CDS | 45.0% | |
| CAGATGAGAGGAAACGTGAT+GGG | + | chr8.1:66006090-66006109 | MS.gene056168:CDS | 45.0% | |
| CGCTTCATGCAAATTGAAGG+AGG | - | chr8.1:66006293-66006312 | None:intergenic | 45.0% | |
| CTATTCACCCTCTTATTGGC+AGG | - | chr8.1:66008869-66008888 | None:intergenic | 45.0% | |
| CTCTAGCAAAAAGTGGTCAG+TGG | + | chr8.1:66008260-66008279 | MS.gene056168:CDS | 45.0% | |
| CTTAGCCGCATAGTTACGAT+TGG | - | chr8.1:66005808-66005827 | None:intergenic | 45.0% | |
| CTTAGGGCCTGAAATCATCA+TGG | - | chr8.1:66006333-66006352 | None:intergenic | 45.0% | |
| GACAAAGTGTAACAAGCTGG+AGG | - | chr8.1:66007025-66007044 | None:intergenic | 45.0% | |
| GATATTGTGTCCGATGGGTA+TGG | + | chr8.1:66005830-66005849 | MS.gene056168:CDS | 45.0% | |
| GCATTCTTATCGCTTTGTGG+AGG | - | chr8.1:66008674-66008693 | None:intergenic | 45.0% | |
| GCTATCACGCTACAAAGTGA+AGG | + | chr8.1:66005938-66005957 | MS.gene056168:CDS | 45.0% | |
| GCTGTTGAAAGAAATGCTGC+CGG | + | chr8.1:66005767-66005786 | MS.gene056168:CDS | 45.0% | |
| GTGATCCCTCTAGCAAAAAG+TGG | + | chr8.1:66008253-66008272 | MS.gene056168:CDS | 45.0% | |
| GTGCACAAACATGTCACTGT+TGG | + | chr8.1:66005671-66005690 | MS.gene056168:CDS | 45.0% | |
| GTTATCCCTTGCGAGAAAGA+AGG | - | chr8.1:66008342-66008361 | None:intergenic | 45.0% | |
| TATGCAGCCTGCCAATAAGA+GGG | + | chr8.1:66008859-66008878 | MS.gene056168:CDS | 45.0% | |
| TGAGCGTTCATCTCACTTTG+TGG | - | chr8.1:66008917-66008936 | None:intergenic | 45.0% | |
| TTGAAAGAAATGCTGCCGGA+AGG | + | chr8.1:66005771-66005790 | MS.gene056168:CDS | 45.0% | |
| TTGCAGAAGAAGCCATTGAG+TGG | + | chr8.1:66007536-66007555 | MS.gene056168:CDS | 45.0% | |
| TTGGGCAATGTGTTACCTTC+CGG | - | chr8.1:66005789-66005808 | None:intergenic | 45.0% | |
| ! | AAACATGTCACTGTTGGCTG+CGG | + | chr8.1:66005677-66005696 | MS.gene056168:CDS | 45.0% |
| ! | ATCCGGCTGATTCTTTGCAA+TGG | + | chr8.1:66006123-66006142 | MS.gene056168:CDS | 45.0% |
| ! | GCATTCTTCTCGCTTTGTTG+AGG | - | chr8.1:66008818-66008837 | None:intergenic | 45.0% |
| ! | GCGCTTGTTGAAAAGACTCT+TGG | - | chr8.1:66005602-66005621 | None:intergenic | 45.0% |
| ! | TGATGGGTATCTTCGTCATC+CGG | + | chr8.1:66006106-66006125 | MS.gene056168:CDS | 45.0% |
| !! | CTGTTCACTCTCTTTTTGGC+AGG | - | chr8.1:66008773-66008792 | None:intergenic | 45.0% |
| !! | TGAAGAAGTGTCCTAGGTGT+GGG | + | chr8.1:66005916-66005935 | MS.gene056168:CDS | 45.0% |
| !! | TTGAAGAAGTGTCCTAGGTG+TGG | + | chr8.1:66005915-66005934 | MS.gene056168:CDS | 45.0% |
| !!! | CACTGACCACTTTTTGCTAG+AGG | - | chr8.1:66008262-66008281 | None:intergenic | 45.0% |
| !!! | GTGTTGACTCCATTTTCGGT+AGG | - | chr8.1:66008941-66008960 | None:intergenic | 45.0% |
| !! | GTAATATAAAAATATAATAA+TGG | - | chr8.1:66008627-66008646 | None:intergenic | 5.0% |
| AAGAAGAGCCTTTGTGTCCG+GGG | + | chr8.1:66005649-66005668 | MS.gene056168:CDS | 50.0% | |
| AAGTGGTCAGTGGTTCTCCA+AGG | + | chr8.1:66008270-66008289 | MS.gene056168:CDS | 50.0% | |
| AGTATGCCACGAATAGCCAC+CGG | - | chr8.1:66007202-66007221 | None:intergenic | 50.0% | |
| AGTGACATGTTTGTGCACCC+CGG | - | chr8.1:66005669-66005688 | None:intergenic | 50.0% | |
| ATGCTCAGCCTGCCAAAAAG+AGG | + | chr8.1:66008690-66008709 | MS.gene056168:CDS | 50.0% | |
| ATGTCAGACGCAGCAGCAAT+AGG | + | chr8.1:66007571-66007590 | MS.gene056168:CDS | 50.0% | |
| CCTGCATATGGGAACTTGTC+CGG | + | chr8.1:66006500-66006519 | MS.gene056168:CDS | 50.0% | |
| CTGTAGCAAGTCCAAGCCTA+AGG | - | chr8.1:66006196-66006215 | None:intergenic | 50.0% | |
| CTTCCCTCATGACGAGACTT+TGG | - | chr8.1:66007601-66007620 | None:intergenic | 50.0% | |
| GAGACTCCTTCTTTCTCGCA+AGG | + | chr8.1:66008333-66008352 | MS.gene056168:CDS | 50.0% | |
| GAGGGAAGATGTGCAGGTAA+GGG | + | chr8.1:66007613-66007632 | MS.gene056168:CDS | 50.0% | |
| GCAGATGAGAGGAAACGTGA+TGG | + | chr8.1:66006089-66006108 | MS.gene056168:CDS | 50.0% | |
| GCGTTCATCTCACTTTGTGG+AGG | - | chr8.1:66008914-66008933 | None:intergenic | 50.0% | |
| GGTGCAACAATTCATACCGG+TGG | + | chr8.1:66007183-66007202 | MS.gene056168:intron | 50.0% | |
| TACCATAACACCTTCGCAGG+AGG | - | chr8.1:66005999-66006018 | None:intergenic | 50.0% | |
| TGAGGGAAGATGTGCAGGTA+AGG | + | chr8.1:66007612-66007631 | MS.gene056168:CDS | 50.0% | |
| TTCATACCGGTGGCTATTCG+TGG | + | chr8.1:66007193-66007212 | MS.gene056168:intron | 50.0% | |
| ! | AGTTAGAGGTGCAACGCGAA+TGG | + | chr8.1:66009021-66009040 | MS.gene056168:CDS | 50.0% |
| ! | TCAAAACAGTGGGGTGATGG+TGG | + | chr8.1:66007969-66007988 | MS.gene056168:CDS | 50.0% |
| !! | AGGCTTGGACTTGCTACAGA+TGG | + | chr8.1:66006197-66006216 | MS.gene056168:CDS | 50.0% |
| AAGTACTTCCTCACGCCCCA+TGG | - | chr8.1:66007659-66007678 | None:intergenic | 55.0% | |
| ACTTAAAGCCATGGGGCGTG+AGG | + | chr8.1:66007648-66007667 | MS.gene056168:CDS | 55.0% | |
| AGATGTGCAGGTAAGGGTCG+AGG | + | chr8.1:66007619-66007638 | MS.gene056168:CDS | 55.0% | |
| CAATTAGCTCCACGGCCAGA+CGG | + | chr8.1:66006983-66007002 | MS.gene056168:CDS | 55.0% | |
| CCGGACAAGTTCCCATATGC+AGG | - | chr8.1:66006503-66006522 | None:intergenic | 55.0% | |
| CGTCATGAGGGAAGATGTGC+AGG | + | chr8.1:66007607-66007626 | MS.gene056168:CDS | 55.0% | |
| GGAGAACGGGCCATGAACTA+TGG | - | chr8.1:66006253-66006272 | None:intergenic | 55.0% | |
| GTTTGTTTACCGTCTGGCCG+TGG | - | chr8.1:66006995-66007014 | None:intergenic | 55.0% | |
| TAGCGTGATAGCCCACACCT+AGG | - | chr8.1:66005930-66005949 | None:intergenic | 55.0% | |
| TCGCTTTGTGGAGGAGCTGA+TGG | - | chr8.1:66008665-66008684 | None:intergenic | 55.0% | |
| TTTGTGCACCCCGGACACAA+AGG | - | chr8.1:66005660-66005679 | None:intergenic | 55.0% | |
| !! | GTCCTCCTGCGAAGGTGTTA+TGG | + | chr8.1:66005994-66006013 | MS.gene056168:CDS | 55.0% |
| ! | CTCAAAGCGTCCTCCTGCGA+AGG | + | chr8.1:66005986-66006005 | MS.gene056168:CDS | 60.0% |
| !! | GGGGTGATGGTGGTAGCTGA+GGG | + | chr8.1:66007979-66007998 | MS.gene056168:CDS | 60.0% |
| !! | TGGGGTGATGGTGGTAGCTG+AGG | + | chr8.1:66007978-66007997 | MS.gene056168:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 66005411 | 66009243 | 66005411 | ID=MS.gene056168 |
| chr8.1 | mRNA | 66005411 | 66009243 | 66005411 | ID=MS.gene056168.t1;Parent=MS.gene056168 |
| chr8.1 | exon | 66005411 | 66007004 | 66005411 | ID=MS.gene056168.t1.exon1;Parent=MS.gene056168.t1 |
| chr8.1 | CDS | 66005411 | 66007004 | 66005411 | ID=cds.MS.gene056168.t1;Parent=MS.gene056168.t1 |
| chr8.1 | exon | 66007485 | 66008394 | 66007485 | ID=MS.gene056168.t1.exon2;Parent=MS.gene056168.t1 |
| chr8.1 | CDS | 66007485 | 66008394 | 66007485 | ID=cds.MS.gene056168.t1;Parent=MS.gene056168.t1 |
| chr8.1 | exon | 66008649 | 66009243 | 66008649 | ID=MS.gene056168.t1.exon3;Parent=MS.gene056168.t1 |
| chr8.1 | CDS | 66008649 | 66009243 | 66008649 | ID=cds.MS.gene056168.t1;Parent=MS.gene056168.t1 |
| Gene Sequence |
| Protein sequence |
