Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05622.t1 | XP_027699862.1 | 88.1 | 118 | 14 | 0 | 9 | 126 | 143 | 260 | 3.70E-49 | 204.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05622.t1 | P62785 | 100.0 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 3.8e-50 | 198.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05622.t1 | A0A5D2J1I8 | 99.0 | 103 | 1 | 0 | 24 | 126 | 1 | 103 | 3.0e-48 | 200.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05622 | MS.gene061866 | 0.801512 | 8.69E-49 | -1.69E-46 |
| MS.gene05622 | MS.gene061867 | 0.819809 | 9.56E-53 | -1.69E-46 |
| MS.gene05622 | MS.gene061869 | 0.80392 | 2.77E-49 | -1.69E-46 |
| MS.gene05622 | MS.gene061874 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene05622 | MS.gene31169 | 0.826094 | 3.27E-54 | -1.69E-46 |
| MS.gene05622 | MS.gene45478 | 0.823544 | 1.31E-53 | -1.69E-46 |
| MS.gene05622 | MS.gene88680 | 0.800748 | 1.25E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05622.t1 | MTR_7g029510 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_7g099610 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_5g063620 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_4g061827 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_4g061920 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_3g462400 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_3g054380 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_3g462730 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_3g462510 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_3g070920 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_3g061440 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_3g462410 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_2g096100 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_8g038460 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.09e-67 | 198 |
| MS.gene05622.t1 | MTR_4g128150 | 100.000 | 100 | 0 | 0 | 26 | 125 | 3 | 102 | 1.31e-66 | 206 |
| MS.gene05622.t1 | MTR_7g029520 | 84.000 | 50 | 8 | 0 | 50 | 99 | 1 | 50 | 6.53e-21 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05622.t1 | AT5G59970 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT5G59690 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT5G59970 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT3G46320 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT3G45930 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT3G53730 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT2G28740 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT1G07660 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT1G07820 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT1G07820 | 100.000 | 101 | 0 | 0 | 26 | 126 | 3 | 103 | 2.19e-67 | 198 |
| MS.gene05622.t1 | AT1G07660 | 83.168 | 101 | 0 | 1 | 26 | 126 | 3 | 86 | 4.66e-50 | 154 |
Find 45 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCTGTGCGGTTGTGTAC+TGG | 0.281117 | 3.2:-53428249 | MS.gene05622:CDS |
| GGAAGAACCCTCTATGGTTT+TGG | 0.304646 | 3.2:-53427421 | MS.gene05622:CDS |
| AGGTGTCTTGAAGATCTTCT+TGG | 0.396647 | 3.2:-53427536 | MS.gene05622:CDS |
| GCACGGCGAGCAAGCGGCGG+AGG | 0.402136 | 3.2:+53428295 | None:intergenic |
| AAAATGTCAGGCCGTGGAAA+GGG | 0.408859 | 3.2:-53427706 | MS.gene05622:intron |
| GTCCTGTGCGGTTGTGTACT+GGG | 0.424332 | 3.2:-53428248 | MS.gene05622:intron |
| TTCAACCTCCAAAACCATAG+AGG | 0.438439 | 3.2:+53427413 | None:intergenic |
| GACAAGGGCGACGGCGAGAT+GGG | 0.442793 | 3.2:+53428268 | None:intergenic |
| AGGCAGGGAAGAACCCTCTA+TGG | 0.447332 | 3.2:-53427427 | MS.gene05622:CDS |
| CTCGCCAATCGGCGAATAGC+AGG | 0.453484 | 3.2:+53427607 | None:intergenic |
| GGAGCACGGCGAGCAAGCGG+CGG | 0.454610 | 3.2:+53428292 | None:intergenic |
| GGTAAGGGTCTGGGAAAGGG+AGG | 0.476615 | 3.2:-53427682 | MS.gene05622:CDS |
| GGCGGAGCACGGCGAGCAAG+CGG | 0.481094 | 3.2:+53428289 | None:intergenic |
| TGTCTATGCTTTGAAGAGGC+AGG | 0.485721 | 3.2:-53427443 | MS.gene05622:CDS |
| GGACAAGGGCGACGGCGAGA+TGG | 0.496013 | 3.2:+53428267 | None:intergenic |
| CACCACCTCTTCTCGCCAAT+CGG | 0.499060 | 3.2:+53427596 | None:intergenic |
| GGTTCTTCGTGACAACATCC+AGG | 0.501637 | 3.2:-53427641 | MS.gene05622:CDS |
| CAAGCCTGCTATTCGCCGAT+TGG | 0.502152 | 3.2:-53427611 | MS.gene05622:CDS |
| CAATCGGCGAATAGCAGGCT+TGG | 0.515998 | 3.2:+53427612 | None:intergenic |
| AGGGAGGTGCAAAGAGACAT+AGG | 0.520046 | 3.2:-53427666 | MS.gene05622:CDS |
| TTACATACACTGAGCATGCT+AGG | 0.520723 | 3.2:-53427492 | MS.gene05622:CDS |
| CGCCGATTGGCGAGAAGAGG+TGG | 0.530277 | 3.2:-53427598 | MS.gene05622:CDS |
| GTCTATGCTTTGAAGAGGCA+GGG | 0.532756 | 3.2:-53427442 | MS.gene05622:CDS |
| ACCGCACAGGACAAGGGCGA+CGG | 0.537076 | 3.2:+53428259 | None:intergenic |
| ACGGCGAGATGGGCGGAGCA+CGG | 0.538504 | 3.2:+53428278 | None:intergenic |
| AAGGGCGACGGCGAGATGGG+CGG | 0.546356 | 3.2:+53428271 | None:intergenic |
| GAAAATGTCAGGCCGTGGAA+AGG | 0.547267 | 3.2:-53427707 | MS.gene05622:intron |
| AATGTCAGGCCGTGGAAAGG+GGG | 0.551839 | 3.2:-53427704 | MS.gene05622:intron |
| TACCCAGTACACAACCGCAC+AGG | 0.564180 | 3.2:+53428246 | None:intergenic |
| AAATGTCAGGCCGTGGAAAG+GGG | 0.566511 | 3.2:-53427705 | MS.gene05622:intron |
| GAGGAAGACTGTGACAGCCA+TGG | 0.570644 | 3.2:-53427470 | MS.gene05622:CDS |
| TCAACCTCCAAAACCATAGA+GGG | 0.578325 | 3.2:+53427414 | None:intergenic |
| GTACACAACCGCACAGGACA+AGG | 0.583355 | 3.2:+53428252 | None:intergenic |
| TAGCAGGCTTGGTGATACCC+TGG | 0.594313 | 3.2:+53427623 | None:intergenic |
| ATGTCAGGCCGTGGAAAGGG+GGG | 0.596640 | 3.2:-53427703 | MS.gene05622:intron |
| GGTGGTGTCAAGAGAATCAG+TGG | 0.607763 | 3.2:-53427580 | MS.gene05622:CDS |
| ATTCGCCGATTGGCGAGAAG+AGG | 0.615284 | 3.2:-53427601 | MS.gene05622:CDS |
| AGGTGCAAAGAGACATAGGA+AGG | 0.617656 | 3.2:-53427662 | MS.gene05622:CDS |
| TTGATATATGAAGAAACAAG+AGG | 0.619131 | 3.2:-53427556 | MS.gene05622:CDS |
| CAAAGCATAGACAACATCCA+TGG | 0.629842 | 3.2:+53427453 | None:intergenic |
| TACACAACCGCACAGGACAA+GGG | 0.643330 | 3.2:+53428253 | None:intergenic |
| GCCGTCGCCCTTGTCCTGTG+CGG | 0.664678 | 3.2:-53428260 | MS.gene05622:CDS |
| GTTCTTCGTGACAACATCCA+GGG | 0.676380 | 3.2:-53427640 | MS.gene05622:CDS |
| ATGTTGTCTATGCTTTGAAG+AGG | 0.684273 | 3.2:-53427447 | MS.gene05622:CDS |
| CATACACTGAGCATGCTAGG+AGG | 0.707859 | 3.2:-53427489 | MS.gene05622:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGACTTATGAAATAAAAA+AGG | + | chr3.2:53427675-53427694 | None:intergenic | 15.0% |
| !! | AAGACTTATGAAATAAAAAA+GGG | + | chr3.2:53427674-53427693 | None:intergenic | 15.0% |
| !!! | CTTTGTATTTTAATAAAAAC+AGG | - | chr3.2:53427746-53427765 | MS.gene05622:intron | 15.0% |
| !! | TTGAGAAATTAGAGAAATTA+GGG | + | chr3.2:53427956-53427975 | None:intergenic | 20.0% |
| !! | TTTGAGAAATTAGAGAAATT+AGG | + | chr3.2:53427957-53427976 | None:intergenic | 20.0% |
| !!! | TATGAAATAAAAAAGGGTAT+TGG | + | chr3.2:53427668-53427687 | None:intergenic | 20.0% |
| ! | AGATACTAGAGAATATAATG+TGG | - | chr3.2:53427599-53427618 | MS.gene05622:CDS | 25.0% |
| ! | ATTAAGACATTAGAATGAAC+AGG | + | chr3.2:53427531-53427550 | None:intergenic | 25.0% |
| ! | CAAAAATTCATTCAATGTGT+TGG | + | chr3.2:53427579-53427598 | None:intergenic | 25.0% |
| ! | CATGAACAAGGAAATTAAAA+TGG | + | chr3.2:53427635-53427654 | None:intergenic | 25.0% |
| ! | TTGATATATGAAGAAACAAG+AGG | - | chr3.2:53428160-53428179 | MS.gene05622:intron | 25.0% |
| !!! | TTTCATCTTTTGAAAATGTC+AGG | - | chr3.2:53427998-53428017 | MS.gene05622:intron | 25.0% |
| AAACCAAGAGATTAATCCAA+TGG | - | chr3.2:53427790-53427809 | MS.gene05622:intron | 30.0% | |
| ACCAAAAAGTTACTGAATCC+AGG | - | chr3.2:53427845-53427864 | MS.gene05622:intron | 35.0% | |
| CTTTGTTCAATATCCACCAT+TGG | + | chr3.2:53427809-53427828 | None:intergenic | 35.0% | |
| GAGTATTTATCTGTGGTAGT+TGG | + | chr3.2:53427892-53427911 | None:intergenic | 35.0% | |
| ! | ACCTGGATTCAGTAACTTTT+TGG | + | chr3.2:53427849-53427868 | None:intergenic | 35.0% |
| ! | TGGATTCAGTAACTTTTTGG+TGG | + | chr3.2:53427846-53427865 | None:intergenic | 35.0% |
| !! | ATGTTGTCTATGCTTTGAAG+AGG | - | chr3.2:53428269-53428288 | MS.gene05622:CDS | 35.0% |
| !! | GGATTCAGTAACTTTTTGGT+GGG | + | chr3.2:53427845-53427864 | None:intergenic | 35.0% |
| AGGTGTCTTGAAGATCTTCT+TGG | - | chr3.2:53428180-53428199 | MS.gene05622:intron | 40.0% | |
| ATGTGAGCGAGAAAAGATGA+AGG | + | chr3.2:53427921-53427940 | None:intergenic | 40.0% | |
| CAAAGCATAGACAACATCCA+TGG | + | chr3.2:53428266-53428285 | None:intergenic | 40.0% | |
| CCAAGAGATTAATCCAATGG+TGG | - | chr3.2:53427793-53427812 | MS.gene05622:intron | 40.0% | |
| CCACCATTGGATTAATCTCT+TGG | + | chr3.2:53427796-53427815 | None:intergenic | 40.0% | |
| GGGATCTGAGTATTTATCTG+TGG | + | chr3.2:53427899-53427918 | None:intergenic | 40.0% | |
| TCAACCTCCAAAACCATAGA+GGG | + | chr3.2:53428305-53428324 | None:intergenic | 40.0% | |
| TGTGAGCGAGAAAAGATGAA+GGG | + | chr3.2:53427920-53427939 | None:intergenic | 40.0% | |
| TTACATACACTGAGCATGCT+AGG | - | chr3.2:53428224-53428243 | MS.gene05622:intron | 40.0% | |
| AAAATGTCAGGCCGTGGAAA+GGG | - | chr3.2:53428010-53428029 | MS.gene05622:intron | 45.0% | |
| AGGTGCAAAGAGACATAGGA+AGG | - | chr3.2:53428054-53428073 | MS.gene05622:intron | 45.0% | |
| GTGAGCGAGAAAAGATGAAG+GGG | + | chr3.2:53427919-53427938 | None:intergenic | 45.0% | |
| GTTCTTCGTGACAACATCCA+GGG | - | chr3.2:53428076-53428095 | MS.gene05622:intron | 45.0% | |
| TTTCGTGTACTGTGCAAGCA+TGG | - | chr3.2:53427702-53427721 | MS.gene05622:intron | 45.0% | |
| ! | GGAAGAACCCTCTATGGTTT+TGG | - | chr3.2:53428295-53428314 | MS.gene05622:CDS | 45.0% |
| !! | CTTTTGAAAATGTCAGGCCG+TGG | - | chr3.2:53428004-53428023 | MS.gene05622:intron | 45.0% |
| !! | GGCATTGACAAGCATGAACA+AGG | + | chr3.2:53427647-53427666 | None:intergenic | 45.0% |
| !! | GTCTATGCTTTGAAGAGGCA+GGG | - | chr3.2:53428274-53428293 | MS.gene05622:CDS | 45.0% |
| !! | TGTCTATGCTTTGAAGAGGC+AGG | - | chr3.2:53428273-53428292 | MS.gene05622:CDS | 45.0% |
| !!! | AGAACCCTCTATGGTTTTGG+AGG | - | chr3.2:53428298-53428317 | MS.gene05622:CDS | 45.0% |
| AAATGTCAGGCCGTGGAAAG+GGG | - | chr3.2:53428011-53428030 | MS.gene05622:intron | 50.0% | |
| CATACACTGAGCATGCTAGG+AGG | - | chr3.2:53428227-53428246 | MS.gene05622:intron | 50.0% | |
| GAAAATGTCAGGCCGTGGAA+AGG | - | chr3.2:53428009-53428028 | MS.gene05622:intron | 50.0% | |
| GGTTCTTCGTGACAACATCC+AGG | - | chr3.2:53428075-53428094 | MS.gene05622:intron | 50.0% | |
| TACACAACCGCACAGGACAA+GGG | + | chr3.2:53427466-53427485 | None:intergenic | 50.0% | |
| ! | AGGGAGGTGCAAAGAGACAT+AGG | - | chr3.2:53428050-53428069 | MS.gene05622:intron | 50.0% |
| ! | GGTGGTGTCAAGAGAATCAG+TGG | - | chr3.2:53428136-53428155 | MS.gene05622:intron | 50.0% |
| AATGTCAGGCCGTGGAAAGG+GGG | - | chr3.2:53428012-53428031 | MS.gene05622:intron | 55.0% | |
| AGGCAGGGAAGAACCCTCTA+TGG | - | chr3.2:53428289-53428308 | MS.gene05622:CDS | 55.0% | |
| CAAGCCTGCTATTCGCCGAT+TGG | - | chr3.2:53428105-53428124 | MS.gene05622:intron | 55.0% | |
| CAATCGGCGAATAGCAGGCT+TGG | + | chr3.2:53428107-53428126 | None:intergenic | 55.0% | |
| CACCACCTCTTCTCGCCAAT+CGG | + | chr3.2:53428123-53428142 | None:intergenic | 55.0% | |
| GAGGAAGACTGTGACAGCCA+TGG | - | chr3.2:53428246-53428265 | MS.gene05622:intron | 55.0% | |
| GTACACAACCGCACAGGACA+AGG | + | chr3.2:53427467-53427486 | None:intergenic | 55.0% | |
| GTCCTGTGCGGTTGTGTACT+GGG | - | chr3.2:53427468-53427487 | MS.gene05622:CDS | 55.0% | |
| TACCCAGTACACAACCGCAC+AGG | + | chr3.2:53427473-53427492 | None:intergenic | 55.0% | |
| TGTCCTGTGCGGTTGTGTAC+TGG | - | chr3.2:53427467-53427486 | MS.gene05622:CDS | 55.0% | |
| ! | ATTCGCCGATTGGCGAGAAG+AGG | - | chr3.2:53428115-53428134 | MS.gene05622:intron | 55.0% |
| !! | GTGGTAGTTGGTAGCGAGAG+CGG | + | chr3.2:53427880-53427899 | None:intergenic | 55.0% |
| !! | TAGCAGGCTTGGTGATACCC+TGG | + | chr3.2:53428096-53428115 | None:intergenic | 55.0% |
| !! | TGGTAGTTGGTAGCGAGAGC+GGG | + | chr3.2:53427879-53427898 | None:intergenic | 55.0% |
| ATGTCAGGCCGTGGAAAGGG+GGG | - | chr3.2:53428013-53428032 | MS.gene05622:intron | 60.0% | |
| CTCGCCAATCGGCGAATAGC+AGG | + | chr3.2:53428112-53428131 | None:intergenic | 60.0% | |
| GACCCTTACCCCCCTTTCCA+CGG | + | chr3.2:53428024-53428043 | None:intergenic | 60.0% | |
| GGAAAGGGGGGTAAGGGTCT+GGG | - | chr3.2:53428025-53428044 | MS.gene05622:intron | 60.0% | |
| GGGGGTAAGGGTCTGGGAAA+GGG | - | chr3.2:53428031-53428050 | MS.gene05622:intron | 60.0% | |
| GGTAAGGGTCTGGGAAAGGG+AGG | - | chr3.2:53428034-53428053 | MS.gene05622:intron | 60.0% | |
| TGGAAAGGGGGGTAAGGGTC+TGG | - | chr3.2:53428024-53428043 | MS.gene05622:intron | 60.0% | |
| ! | TGGTAGCGAGAGCGGGATGA+AGG | + | chr3.2:53427872-53427891 | None:intergenic | 60.0% |
| ACCGCACAGGACAAGGGCGA+CGG | + | chr3.2:53427460-53427479 | None:intergenic | 65.0% | |
| AGGCCGTGGAAAGGGGGGTA+AGG | - | chr3.2:53428018-53428037 | MS.gene05622:intron | 65.0% | |
| CGAGAGCGGGATGAAGGACC+TGG | + | chr3.2:53427866-53427885 | None:intergenic | 65.0% | |
| GACAAGGGCGACGGCGAGAT+GGG | + | chr3.2:53427451-53427470 | None:intergenic | 65.0% | |
| GGCCGTGGAAAGGGGGGTAA+GGG | - | chr3.2:53428019-53428038 | MS.gene05622:intron | 65.0% | |
| GGGGGGTAAGGGTCTGGGAA+AGG | - | chr3.2:53428030-53428049 | MS.gene05622:intron | 65.0% | |
| ! | CGCCGATTGGCGAGAAGAGG+TGG | - | chr3.2:53428118-53428137 | MS.gene05622:intron | 65.0% |
| AAGGGCGACGGCGAGATGGG+CGG | + | chr3.2:53427448-53427467 | None:intergenic | 70.0% | |
| ACGGCGAGATGGGCGGAGCA+CGG | + | chr3.2:53427441-53427460 | None:intergenic | 70.0% | |
| GCCGTCGCCCTTGTCCTGTG+CGG | - | chr3.2:53427456-53427475 | MS.gene05622:CDS | 70.0% | |
| GGACAAGGGCGACGGCGAGA+TGG | + | chr3.2:53427452-53427471 | None:intergenic | 70.0% | |
| GGAGCACGGCGAGCAAGCGG+CGG | + | chr3.2:53427427-53427446 | None:intergenic | 75.0% | |
| GGCGGAGCACGGCGAGCAAG+CGG | + | chr3.2:53427430-53427449 | None:intergenic | 75.0% | |
| ! | GCACGGCGAGCAAGCGGCGG+AGG | + | chr3.2:53427424-53427443 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 53427414 | 53428324 | 53427414 | ID=MS.gene05622 |
| chr3.2 | mRNA | 53427414 | 53428324 | 53427414 | ID=MS.gene05622.t1;Parent=MS.gene05622 |
| chr3.2 | exon | 53428249 | 53428324 | 53428249 | ID=MS.gene05622.t1.exon1;Parent=MS.gene05622.t1 |
| chr3.2 | CDS | 53428249 | 53428324 | 53428249 | ID=cds.MS.gene05622.t1;Parent=MS.gene05622.t1 |
| chr3.2 | exon | 53427414 | 53427718 | 53427414 | ID=MS.gene05622.t1.exon2;Parent=MS.gene05622.t1 |
| chr3.2 | CDS | 53427414 | 53427718 | 53427414 | ID=cds.MS.gene05622.t1;Parent=MS.gene05622.t1 |
| Gene Sequence |
| Protein sequence |
