Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061866.t1 | KCW52694.1 | 100 | 103 | 0 | 0 | 1 | 103 | 4 | 106 | 7.50E-48 | 199.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061866.t1 | P62785 | 100.0 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 1.8e-50 | 199.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061866.t1 | M5VRN0 | 100.0 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 5.4e-48 | 199.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene061866 | 0.846853 | 1.67E-59 | -1.69E-46 |
MS.gene049159 | MS.gene061866 | 0.833466 | 5.25E-56 | -1.69E-46 |
MS.gene049255 | MS.gene061866 | 0.836638 | 8.32E-57 | -1.69E-46 |
MS.gene049341 | MS.gene061866 | 0.826514 | 2.60E-54 | -1.69E-46 |
MS.gene049350 | MS.gene061866 | 0.837281 | 5.70E-57 | -1.69E-46 |
MS.gene049501 | MS.gene061866 | 0.817845 | 2.67E-52 | -1.69E-46 |
MS.gene049821 | MS.gene061866 | 0.893822 | 4.39E-75 | -1.69E-46 |
MS.gene049825 | MS.gene061866 | 0.800012 | 1.76E-48 | -1.69E-46 |
MS.gene049850 | MS.gene061866 | 0.85639 | 3.32E-62 | -1.69E-46 |
MS.gene049873 | MS.gene061866 | 0.817261 | 3.61E-52 | -1.69E-46 |
MS.gene050020 | MS.gene061866 | 0.846716 | 1.82E-59 | -1.69E-46 |
MS.gene05045 | MS.gene061866 | 0.813662 | 2.29E-51 | -1.69E-46 |
MS.gene050689 | MS.gene061866 | 0.853905 | 1.75E-61 | -1.69E-46 |
MS.gene050807 | MS.gene061866 | 0.846988 | 1.54E-59 | -1.69E-46 |
MS.gene050815 | MS.gene061866 | 0.816332 | 5.84E-52 | -1.69E-46 |
MS.gene050838 | MS.gene061866 | 0.81588 | 7.37E-52 | -1.69E-46 |
MS.gene050901 | MS.gene061866 | 0.884448 | 1.90E-71 | -1.69E-46 |
MS.gene051018 | MS.gene061866 | 0.803544 | 3.31E-49 | -1.69E-46 |
MS.gene051180 | MS.gene061866 | 0.806592 | 7.63E-50 | -1.69E-46 |
MS.gene051198 | MS.gene061866 | 0.801611 | 8.30E-49 | -1.69E-46 |
MS.gene051243 | MS.gene061866 | 0.815391 | 9.47E-52 | -1.69E-46 |
MS.gene051247 | MS.gene061866 | 0.844168 | 8.94E-59 | -1.69E-46 |
MS.gene051328 | MS.gene061866 | 0.884419 | 1.95E-71 | -1.69E-46 |
MS.gene05134 | MS.gene061866 | 0.823295 | 1.50E-53 | -1.69E-46 |
MS.gene05157 | MS.gene061866 | 0.840384 | 8.99E-58 | -1.69E-46 |
MS.gene051664 | MS.gene061866 | 0.823466 | 1.36E-53 | -1.69E-46 |
MS.gene051700 | MS.gene061866 | 0.839125 | 1.91E-57 | -1.69E-46 |
MS.gene051719 | MS.gene061866 | 0.869969 | 2.08E-66 | -1.69E-46 |
MS.gene051720 | MS.gene061866 | 0.868978 | 4.37E-66 | -1.69E-46 |
MS.gene051744 | MS.gene061866 | 0.833111 | 6.43E-56 | -1.69E-46 |
MS.gene05188 | MS.gene061866 | 0.816179 | 6.32E-52 | -1.69E-46 |
MS.gene051975 | MS.gene061866 | 0.821481 | 3.95E-53 | -1.69E-46 |
MS.gene052012 | MS.gene061866 | 0.811116 | 8.22E-51 | -1.69E-46 |
MS.gene052020 | MS.gene061866 | 0.814054 | 1.87E-51 | -1.69E-46 |
MS.gene052133 | MS.gene061866 | 0.855101 | 7.91E-62 | -1.69E-46 |
MS.gene052516 | MS.gene061866 | 0.857126 | 2.02E-62 | -1.69E-46 |
MS.gene052519 | MS.gene061866 | 0.839759 | 1.31E-57 | -1.69E-46 |
MS.gene052584 | MS.gene061866 | 0.804243 | 2.37E-49 | -1.69E-46 |
MS.gene052611 | MS.gene061866 | 0.824207 | 9.14E-54 | -1.69E-46 |
MS.gene052665 | MS.gene061866 | 0.802245 | 6.15E-49 | -1.69E-46 |
MS.gene052773 | MS.gene061866 | 0.824465 | 7.95E-54 | -1.69E-46 |
MS.gene052863 | MS.gene061866 | 0.833707 | 4.57E-56 | -1.69E-46 |
MS.gene052879 | MS.gene061866 | 0.813929 | 2.00E-51 | -1.69E-46 |
MS.gene052880 | MS.gene061866 | 0.803589 | 3.24E-49 | -1.69E-46 |
MS.gene052947 | MS.gene061866 | 0.843102 | 1.72E-58 | -1.69E-46 |
MS.gene053008 | MS.gene061866 | 0.842449 | 2.57E-58 | -1.69E-46 |
MS.gene053122 | MS.gene061866 | 0.839915 | 1.19E-57 | -1.69E-46 |
MS.gene053144 | MS.gene061866 | 0.815603 | 8.49E-52 | -1.69E-46 |
MS.gene053226 | MS.gene061866 | 0.863214 | 2.92E-64 | -1.69E-46 |
MS.gene053563 | MS.gene061866 | 0.826837 | 2.18E-54 | -1.69E-46 |
MS.gene053581 | MS.gene061866 | 0.861071 | 1.33E-63 | -1.69E-46 |
MS.gene053599 | MS.gene061866 | 0.818532 | 1.87E-52 | -1.69E-46 |
MS.gene05364 | MS.gene061866 | 0.846857 | 1.67E-59 | -1.69E-46 |
MS.gene053883 | MS.gene061866 | 0.803335 | 3.66E-49 | -1.69E-46 |
MS.gene054236 | MS.gene061866 | 0.817188 | 3.75E-52 | -1.69E-46 |
MS.gene05423 | MS.gene061866 | 0.801869 | 7.35E-49 | -1.69E-46 |
MS.gene054472 | MS.gene061866 | 0.807964 | 3.91E-50 | -1.69E-46 |
MS.gene054584 | MS.gene061866 | 0.80688 | 6.63E-50 | -1.69E-46 |
MS.gene05458 | MS.gene061866 | 0.820168 | 7.91E-53 | -1.69E-46 |
MS.gene054651 | MS.gene061866 | 0.840952 | 6.38E-58 | -1.69E-46 |
MS.gene054775 | MS.gene061866 | 0.824 | 1.02E-53 | -1.69E-46 |
MS.gene055144 | MS.gene061866 | 0.816651 | 4.95E-52 | -1.69E-46 |
MS.gene055162 | MS.gene061866 | 0.80512 | 1.56E-49 | -1.69E-46 |
MS.gene05517 | MS.gene061866 | 0.828499 | 8.69E-55 | -1.69E-46 |
MS.gene055465 | MS.gene061866 | 0.870036 | 1.98E-66 | -1.69E-46 |
MS.gene055466 | MS.gene061866 | 0.888738 | 4.52E-73 | -1.69E-46 |
MS.gene055468 | MS.gene061866 | 0.874532 | 6.27E-68 | -1.69E-46 |
MS.gene055469 | MS.gene061866 | 0.817475 | 3.24E-52 | -1.69E-46 |
MS.gene055512 | MS.gene061866 | 0.829278 | 5.63E-55 | -1.69E-46 |
MS.gene055513 | MS.gene061866 | 0.840407 | 8.86E-58 | -1.69E-46 |
MS.gene055537 | MS.gene061866 | 0.822866 | 1.88E-53 | -1.69E-46 |
MS.gene055580 | MS.gene061866 | -0.858954 | 5.78E-63 | -1.69E-46 |
MS.gene055623 | MS.gene061866 | 0.800615 | 1.33E-48 | -1.69E-46 |
MS.gene055694 | MS.gene061866 | 0.81109 | 8.33E-51 | -1.69E-46 |
MS.gene055778 | MS.gene061866 | 0.828804 | 7.34E-55 | -1.69E-46 |
MS.gene055818 | MS.gene061866 | 0.839825 | 1.26E-57 | -1.69E-46 |
MS.gene055891 | MS.gene061866 | 0.813905 | 2.02E-51 | -1.69E-46 |
MS.gene056005 | MS.gene061866 | 0.838631 | 2.56E-57 | -1.69E-46 |
MS.gene056043 | MS.gene061866 | -0.844386 | 7.81E-59 | -1.69E-46 |
MS.gene05608 | MS.gene061866 | 0.836046 | 1.18E-56 | -1.69E-46 |
MS.gene056215 | MS.gene061866 | 0.898214 | 6.61E-77 | -1.69E-46 |
MS.gene05622 | MS.gene061866 | 0.801512 | 8.69E-49 | -1.69E-46 |
MS.gene056308 | MS.gene061866 | 0.85202 | 6.07E-61 | -1.69E-46 |
MS.gene056366 | MS.gene061866 | 0.83344 | 5.33E-56 | -1.69E-46 |
MS.gene056595 | MS.gene061866 | 0.855064 | 8.10E-62 | -1.69E-46 |
MS.gene057034 | MS.gene061866 | 0.820679 | 6.04E-53 | -1.69E-46 |
MS.gene057060 | MS.gene061866 | 0.800506 | 1.40E-48 | -1.69E-46 |
MS.gene057208 | MS.gene061866 | 0.800028 | 1.75E-48 | -1.69E-46 |
MS.gene057294 | MS.gene061866 | 0.801123 | 1.04E-48 | -1.69E-46 |
MS.gene057444 | MS.gene061866 | 0.816553 | 5.21E-52 | -1.69E-46 |
MS.gene057446 | MS.gene061866 | 0.802058 | 6.72E-49 | -1.69E-46 |
MS.gene057693 | MS.gene061866 | 0.841618 | 4.26E-58 | -1.69E-46 |
MS.gene057694 | MS.gene061866 | 0.834147 | 3.55E-56 | -1.69E-46 |
MS.gene057705 | MS.gene061866 | 0.845807 | 3.22E-59 | -1.69E-46 |
MS.gene057915 | MS.gene061866 | 0.825429 | 4.71E-54 | -1.69E-46 |
MS.gene058010 | MS.gene061866 | 0.812617 | 3.87E-51 | -1.69E-46 |
MS.gene058037 | MS.gene061866 | 0.801403 | 9.15E-49 | -1.69E-46 |
MS.gene058339 | MS.gene061866 | 0.821599 | 3.71E-53 | -1.69E-46 |
MS.gene05847 | MS.gene061866 | 0.823835 | 1.12E-53 | -1.69E-46 |
MS.gene058625 | MS.gene061866 | 0.843247 | 1.58E-58 | -1.69E-46 |
MS.gene058783 | MS.gene061866 | 0.808036 | 3.77E-50 | -1.69E-46 |
MS.gene058852 | MS.gene061866 | 0.806748 | 7.08E-50 | -1.69E-46 |
MS.gene058906 | MS.gene061866 | 0.808783 | 2.61E-50 | -1.69E-46 |
MS.gene05894 | MS.gene061866 | 0.813696 | 2.25E-51 | -1.69E-46 |
MS.gene059151 | MS.gene061866 | 0.812056 | 5.14E-51 | -1.69E-46 |
MS.gene05950 | MS.gene061866 | 0.800593 | 1.34E-48 | -1.69E-46 |
MS.gene05954 | MS.gene061866 | 0.806517 | 7.92E-50 | -1.69E-46 |
MS.gene059625 | MS.gene061866 | 0.833176 | 6.20E-56 | -1.69E-46 |
MS.gene05978 | MS.gene061866 | 0.841772 | 3.88E-58 | -1.69E-46 |
MS.gene059842 | MS.gene061866 | 0.855552 | 5.84E-62 | -1.69E-46 |
MS.gene059937 | MS.gene061866 | 0.815677 | 8.18E-52 | -1.69E-46 |
MS.gene06001 | MS.gene061866 | 0.812966 | 3.25E-51 | -1.69E-46 |
MS.gene060194 | MS.gene061866 | 0.801081 | 1.07E-48 | -1.69E-46 |
MS.gene060310 | MS.gene061866 | 0.807445 | 5.04E-50 | -1.69E-46 |
MS.gene060365 | MS.gene061866 | 0.826579 | 2.51E-54 | -1.69E-46 |
MS.gene060429 | MS.gene061866 | 0.887236 | 1.70E-72 | -1.69E-46 |
MS.gene060519 | MS.gene061866 | 0.823265 | 1.52E-53 | -1.69E-46 |
MS.gene060587 | MS.gene061866 | 0.862896 | 3.66E-64 | -1.69E-46 |
MS.gene060803 | MS.gene061866 | 0.834829 | 2.39E-56 | -1.69E-46 |
MS.gene060917 | MS.gene061866 | 0.834554 | 2.80E-56 | -1.69E-46 |
MS.gene061100 | MS.gene061866 | 0.805325 | 1.41E-49 | -1.69E-46 |
MS.gene061176 | MS.gene061866 | 0.83952 | 1.51E-57 | -1.69E-46 |
MS.gene061177 | MS.gene061866 | 0.839901 | 1.20E-57 | -1.69E-46 |
MS.gene061178 | MS.gene061866 | 0.839364 | 1.66E-57 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061866.t1 | MTR_7g029510 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_7g099610 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_5g063620 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_4g061827 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_4g061920 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_3g462400 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_3g054380 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_3g462730 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_3g462510 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_3g070920 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_3g061440 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_3g462410 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_2g096100 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_8g038460 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.85e-68 | 199 |
MS.gene061866.t1 | MTR_4g128150 | 100.000 | 102 | 0 | 0 | 1 | 102 | 1 | 102 | 1.67e-66 | 204 |
MS.gene061866.t1 | MTR_7g029520 | 84.000 | 50 | 8 | 0 | 27 | 76 | 1 | 50 | 2.15e-21 | 87.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061866.t1 | AT5G59970 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT5G59690 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT5G59970 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT3G46320 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT3G45930 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT3G53730 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT2G28740 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT1G07660 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT1G07820 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT1G07820 | 100.000 | 103 | 0 | 0 | 1 | 103 | 1 | 103 | 2.99e-68 | 199 |
MS.gene061866.t1 | AT1G07660 | 83.495 | 103 | 0 | 1 | 1 | 103 | 1 | 86 | 4.34e-51 | 155 |
Find 33 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGTGTTCTCAAAATCTTCT+TGG | 0.286841 | 7.4:+10747714 | MS.gene061866:CDS |
GGAAGGACCCTTTACGGTTT+CGG | 0.307868 | 7.4:+10747829 | MS.gene061866:CDS |
TGGAAAAGGTGGAAAAGGTT+TGG | 0.419608 | 7.4:+10747558 | MS.gene061866:CDS |
GGAAAAGGTGGAAAAGGTTT+GGG | 0.432725 | 7.4:+10747559 | MS.gene061866:CDS |
AGGCAGGGAAGGACCCTTTA+CGG | 0.435749 | 7.4:+10747823 | MS.gene061866:CDS |
TCGCAGGCTTTGTTATGCCT+TGG | 0.436279 | 7.4:-10747627 | None:intergenic |
GGTGGAAAAGGTTTGGGAAA+GGG | 0.442921 | 7.4:+10747565 | MS.gene061866:CDS |
TCAACCACCGAAACCGTAAA+GGG | 0.488164 | 7.4:-10747836 | None:intergenic |
CTGCGATTCGTCGTCTTGCA+AGG | 0.502831 | 7.4:+10747644 | MS.gene061866:CDS |
TCAGTGCAAGCGAAAATGTC+AGG | 0.509801 | 7.4:+10747532 | None:intergenic |
TGTCTATGCTCTCAAGAGGC+AGG | 0.510611 | 7.4:+10747807 | MS.gene061866:CDS |
AAAATGTCAGGTCGTGGAAA+AGG | 0.512942 | 7.4:+10747544 | None:intergenic |
GGAAAAGGTTTGGGAAAGGG+AGG | 0.514769 | 7.4:+10747568 | MS.gene061866:CDS |
ATCAACCACCGAAACCGTAA+AGG | 0.525393 | 7.4:-10747837 | None:intergenic |
GGTCGTGGAAAAGGTGGAAA+AGG | 0.536368 | 7.4:+10747553 | MS.gene061866:CDS |
TTACTTACACTGAGCACGCT+AGG | 0.551062 | 7.4:+10747758 | MS.gene061866:CDS |
CAAGCGAAAATGTCAGGTCG+TGG | 0.551935 | 7.4:+10747538 | None:intergenic |
CTTGCAAGACGACGAATCGC+AGG | 0.552192 | 7.4:-10747643 | None:intergenic |
ATGCTCTCAAGAGGCAGGGA+AGG | 0.564763 | 7.4:+10747812 | MS.gene061866:CDS |
AGGTGGAAAAGGTTTGGGAA+AGG | 0.583555 | 7.4:+10747564 | MS.gene061866:CDS |
GTCTATGCTCTCAAGAGGCA+GGG | 0.585715 | 7.4:+10747808 | MS.gene061866:CDS |
GAGAAAGACTGTTACCGCCA+TGG | 0.588179 | 7.4:+10747780 | MS.gene061866:CDS |
ATGTCAGGTCGTGGAAAAGG+TGG | 0.588325 | 7.4:+10747547 | MS.gene061866:CDS |
AGGAGCAAAGAGACACAGAA+AGG | 0.597296 | 7.4:+10747588 | MS.gene061866:CDS |
AGGACCCTTTACGGTTTCGG+TGG | 0.602372 | 7.4:+10747832 | MS.gene061866:CDS |
CGTCGTCTTGCAAGGCGTGG+TGG | 0.615268 | 7.4:+10747652 | MS.gene061866:CDS |
ATTCGTCGTCTTGCAAGGCG+TGG | 0.619919 | 7.4:+10747649 | MS.gene061866:CDS |
GTTCTTCGCGATAACATCCA+AGG | 0.633409 | 7.4:+10747610 | MS.gene061866:CDS |
GAGAGCATAGACAACATCCA+TGG | 0.645428 | 7.4:-10747797 | None:intergenic |
ATGTTGTCTATGCTCTCAAG+AGG | 0.677658 | 7.4:+10747803 | MS.gene061866:CDS |
GGTGGTGTGAAGAGAATCAG+CGG | 0.689951 | 7.4:+10747670 | MS.gene061866:CDS |
CTCATCTATGAAGAGACTCG+CGG | 0.713431 | 7.4:+10747694 | MS.gene061866:CDS |
AGCATAGACAACATCCATGG+CGG | 0.735882 | 7.4:-10747794 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATGTTGTCTATGCTCTCAAG+AGG | + | chr7.4:10747803-10747822 | MS.gene061866:CDS | 40.0% | |
CGGTGTTCTCAAAATCTTCT+TGG | + | chr7.4:10747714-10747733 | MS.gene061866:CDS | 40.0% | |
GGAAAAGGTGGAAAAGGTTT+GGG | + | chr7.4:10747559-10747578 | MS.gene061866:CDS | 40.0% | |
TGGAAAAGGTGGAAAAGGTT+TGG | + | chr7.4:10747558-10747577 | MS.gene061866:CDS | 40.0% | |
AGCATAGACAACATCCATGG+CGG | - | chr7.4:10747797-10747816 | None:intergenic | 45.0% | |
AGGAGCAAAGAGACACAGAA+AGG | + | chr7.4:10747588-10747607 | MS.gene061866:CDS | 45.0% | |
AGGTGGAAAAGGTTTGGGAA+AGG | + | chr7.4:10747564-10747583 | MS.gene061866:CDS | 45.0% | |
CTCATCTATGAAGAGACTCG+CGG | + | chr7.4:10747694-10747713 | MS.gene061866:CDS | 45.0% | |
GGTGGAAAAGGTTTGGGAAA+GGG | + | chr7.4:10747565-10747584 | MS.gene061866:CDS | 45.0% | |
GTTCTTCGCGATAACATCCA+AGG | + | chr7.4:10747610-10747629 | MS.gene061866:CDS | 45.0% | |
TCAACCACCGAAACCGTAAA+GGG | - | chr7.4:10747839-10747858 | None:intergenic | 45.0% | |
TTACTTACACTGAGCACGCT+AGG | + | chr7.4:10747758-10747777 | MS.gene061866:CDS | 45.0% | |
! | GAGAGCATAGACAACATCCA+TGG | - | chr7.4:10747800-10747819 | None:intergenic | 45.0% |
ATGTCAGGTCGTGGAAAAGG+TGG | + | chr7.4:10747547-10747566 | MS.gene061866:CDS | 50.0% | |
GAGAAAGACTGTTACCGCCA+TGG | + | chr7.4:10747780-10747799 | MS.gene061866:CDS | 50.0% | |
GGAAAAGGTTTGGGAAAGGG+AGG | + | chr7.4:10747568-10747587 | MS.gene061866:CDS | 50.0% | |
GGAAGGACCCTTTACGGTTT+CGG | + | chr7.4:10747829-10747848 | MS.gene061866:CDS | 50.0% | |
GGTCGTGGAAAAGGTGGAAA+AGG | + | chr7.4:10747553-10747572 | MS.gene061866:CDS | 50.0% | |
GGTGGTGTGAAGAGAATCAG+CGG | + | chr7.4:10747670-10747689 | MS.gene061866:CDS | 50.0% | |
GTCTATGCTCTCAAGAGGCA+GGG | + | chr7.4:10747808-10747827 | MS.gene061866:CDS | 50.0% | |
TGTCTATGCTCTCAAGAGGC+AGG | + | chr7.4:10747807-10747826 | MS.gene061866:CDS | 50.0% | |
!! | TCGCAGGCTTTGTTATGCCT+TGG | - | chr7.4:10747630-10747649 | None:intergenic | 50.0% |
AGGACCCTTTACGGTTTCGG+TGG | + | chr7.4:10747832-10747851 | MS.gene061866:CDS | 55.0% | |
AGGCAGGGAAGGACCCTTTA+CGG | + | chr7.4:10747823-10747842 | MS.gene061866:CDS | 55.0% | |
ATGCTCTCAAGAGGCAGGGA+AGG | + | chr7.4:10747812-10747831 | MS.gene061866:CDS | 55.0% | |
ATTCGTCGTCTTGCAAGGCG+TGG | + | chr7.4:10747649-10747668 | MS.gene061866:CDS | 55.0% | |
CTGCGATTCGTCGTCTTGCA+AGG | + | chr7.4:10747644-10747663 | MS.gene061866:CDS | 55.0% | |
CTTGCAAGACGACGAATCGC+AGG | - | chr7.4:10747646-10747665 | None:intergenic | 55.0% | |
CGTCGTCTTGCAAGGCGTGG+TGG | + | chr7.4:10747652-10747671 | MS.gene061866:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 10747547 | 10747858 | 10747547 | ID=MS.gene061866 |
chr7.4 | mRNA | 10747547 | 10747858 | 10747547 | ID=MS.gene061866.t1;Parent=MS.gene061866 |
chr7.4 | exon | 10747547 | 10747858 | 10747547 | ID=MS.gene061866.t1.exon1;Parent=MS.gene061866.t1 |
chr7.4 | CDS | 10747547 | 10747858 | 10747547 | ID=cds.MS.gene061866.t1;Parent=MS.gene061866.t1 |
Gene Sequence |
Protein sequence |