Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056598.t1 | PNY10460.1 | 94.1 | 391 | 22 | 1 | 1 | 391 | 12 | 401 | 3.20E-168 | 601.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056598.t1 | O04153 | 81.5 | 346 | 60 | 1 | 9 | 350 | 8 | 353 | 1.3e-138 | 494.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056598.t1 | A0A2K3P5A8 | 94.1 | 391 | 22 | 1 | 1 | 391 | 12 | 401 | 2.3e-168 | 601.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056396 | MS.gene056598 | 0.900641 | 5.98E-78 | -1.69E-46 |
| MS.gene056598 | MS.gene061841 | 0.814037 | 1.89E-51 | -1.69E-46 |
| MS.gene056598 | MS.gene28326 | 0.874518 | 6.35E-68 | -1.69E-46 |
| MS.gene056598 | MS.gene58838 | 0.829544 | 4.85E-55 | -1.69E-46 |
| MS.gene056598 | MS.gene74270 | 0.814517 | 1.48E-51 | -1.69E-46 |
| MS.gene056598 | MS.gene74272 | 0.807798 | 4.24E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056598 | MS.gene44181 | PPI |
| MS.gene056598 | MS.gene40797 | PPI |
| MS.gene005307 | MS.gene056598 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056598.t1 | MTR_4g068080 | 95.989 | 349 | 14 | 0 | 4 | 352 | 3 | 351 | 0.0 | 689 |
| MS.gene056598.t1 | MTR_7g080370 | 81.871 | 342 | 62 | 0 | 9 | 350 | 9 | 350 | 0.0 | 604 |
| MS.gene056598.t1 | MTR_7g080370 | 81.871 | 342 | 62 | 0 | 9 | 350 | 9 | 350 | 0.0 | 603 |
| MS.gene056598.t1 | MTR_1g083960 | 62.805 | 328 | 122 | 0 | 25 | 352 | 24 | 351 | 3.92e-151 | 434 |
| MS.gene056598.t1 | MTR_3g098430 | 33.584 | 399 | 201 | 14 | 3 | 345 | 6 | 396 | 4.52e-51 | 179 |
| MS.gene056598.t1 | MTR_3g098430 | 33.584 | 399 | 201 | 14 | 3 | 345 | 6 | 396 | 5.46e-51 | 179 |
| MS.gene056598.t1 | MTR_8g095680 | 33.333 | 399 | 196 | 14 | 9 | 345 | 9 | 399 | 4.48e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056598.t1 | AT1G08450 | 79.191 | 346 | 68 | 1 | 9 | 350 | 8 | 353 | 0.0 | 586 |
| MS.gene056598.t1 | AT1G08450 | 69.377 | 369 | 84 | 2 | 9 | 373 | 8 | 351 | 0.0 | 525 |
| MS.gene056598.t1 | AT1G56340 | 61.032 | 349 | 133 | 1 | 1 | 349 | 1 | 346 | 4.74e-154 | 441 |
| MS.gene056598.t1 | AT1G56340 | 60.511 | 352 | 136 | 1 | 1 | 352 | 1 | 349 | 1.11e-153 | 440 |
| MS.gene056598.t1 | AT1G09210 | 60.983 | 346 | 135 | 0 | 4 | 349 | 1 | 346 | 1.06e-152 | 438 |
| MS.gene056598.t1 | AT1G08450 | 59.366 | 347 | 81 | 4 | 9 | 350 | 8 | 299 | 1.93e-136 | 394 |
| MS.gene056598.t1 | AT5G61790 | 33.586 | 396 | 198 | 13 | 7 | 345 | 5 | 392 | 4.17e-61 | 206 |
| MS.gene056598.t1 | AT5G07340 | 34.293 | 382 | 188 | 13 | 19 | 345 | 29 | 402 | 2.73e-48 | 172 |
| MS.gene056598.t1 | AT5G07340 | 34.133 | 375 | 184 | 13 | 26 | 345 | 28 | 394 | 2.55e-47 | 169 |
Find 108 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGCCAACATACTTTAT+TGG | 0.145055 | 4.3:-36835926 | None:intergenic |
| GTATGCTGGATTAGGAATTT+TGG | 0.215109 | 4.3:-36835416 | None:intergenic |
| CACCAGGGTTCTGTTCTTAT+TGG | 0.259124 | 4.3:-36833138 | None:intergenic |
| GGTTACATCAAACTTCTTTC+CGG | 0.268805 | 4.3:+36833206 | MS.gene056598:CDS |
| CTCTGGTATCTTTGCAGATA+TGG | 0.277207 | 4.3:-36833111 | None:intergenic |
| AGAGAGAGGGGCAGTAGATA+TGG | 0.294547 | 4.3:+36836479 | MS.gene056598:CDS |
| TTCCACTTTCCCTTGTAGTT+GGG | 0.297629 | 4.3:-36835554 | None:intergenic |
| TTGGCGGTGATACTCCTTAT+AGG | 0.301600 | 4.3:+36833249 | MS.gene056598:CDS |
| CTTCCACTTTCCCTTGTAGT+TGG | 0.304273 | 4.3:-36835555 | None:intergenic |
| TCCTGATCCGAAAGCCAAAA+AGG | 0.307351 | 4.3:+36835226 | MS.gene056598:CDS |
| CACTCCAGATCCTTTCTAAT+AGG | 0.315359 | 4.3:-36834326 | None:intergenic |
| CAAGGATGTCAAAGCGAAAA+AGG | 0.316348 | 4.3:+36834484 | MS.gene056598:CDS |
| GGGTAGGTACCTTTGTTATC+AGG | 0.317917 | 4.3:-36832612 | None:intergenic |
| TTAAGTATACTGCTGGAAAA+TGG | 0.325112 | 4.3:+36832580 | MS.gene056598:CDS |
| GCTTAATGCAGTTTGATGTT+TGG | 0.329009 | 4.3:+36834236 | MS.gene056598:intron |
| ACCTCTGGTTTGACATCATC+AGG | 0.330343 | 4.3:-36834776 | None:intergenic |
| AAGAAATCAACGAACCTATA+AGG | 0.347952 | 4.3:-36833263 | None:intergenic |
| GATAATCGAGAAAGAGATTC+TGG | 0.369820 | 4.3:+36834419 | MS.gene056598:CDS |
| TATGTCAATCAGAAGAAGTT+TGG | 0.379337 | 4.3:+36833230 | MS.gene056598:CDS |
| TTTGTTTCCTGCAGAATTTG+AGG | 0.400410 | 4.3:+36835877 | MS.gene056598:intron |
| GGTCCTCTGTATGCTGGATT+AGG | 0.400688 | 4.3:-36835424 | None:intergenic |
| TTCCATGGTCCTCTGTATGC+TGG | 0.401308 | 4.3:-36835430 | None:intergenic |
| TCTATTGCAGCCAGCAGATT+GGG | 0.403441 | 4.3:+36834730 | MS.gene056598:intron |
| GCGAAAAGAGGAGGAGAGAG+AGG | 0.405303 | 4.3:+36836465 | MS.gene056598:CDS |
| AATGAAAAGTGATTATTAGA+AGG | 0.405531 | 4.3:-36832319 | None:intergenic |
| CTTCTTCTGATTGACATAAC+CGG | 0.420142 | 4.3:-36833225 | None:intergenic |
| CTCTATTGCAGCCAGCAGAT+TGG | 0.421698 | 4.3:+36834729 | MS.gene056598:intron |
| ATGATGAAGATGATGGACTA+TGG | 0.427549 | 4.3:+36835386 | MS.gene056598:CDS |
| TCCACTTTCCCTTGTAGTTG+GGG | 0.429764 | 4.3:-36835553 | None:intergenic |
| TGCAGATATGGCAAAATGCT+TGG | 0.431842 | 4.3:-36833099 | None:intergenic |
| GTATTCTATTAAATTTGAAC+AGG | 0.436462 | 4.3:+36833166 | MS.gene056598:CDS |
| CTGTTCTTATTGGTCAACTC+TGG | 0.442357 | 4.3:-36833128 | None:intergenic |
| TTATCCTATTAGAAAGGATC+TGG | 0.449919 | 4.3:+36834322 | MS.gene056598:CDS |
| TGTTTGACTAGCCTGCTGAC+TGG | 0.450718 | 4.3:+36835362 | MS.gene056598:intron |
| ATTATCGACAAGGACACTAT+AGG | 0.464406 | 4.3:-36834402 | None:intergenic |
| CTGGTAGCATGTACACAGAT+TGG | 0.467406 | 4.3:+36834438 | MS.gene056598:CDS |
| ACCTTTGTTATCAGGATCAC+CGG | 0.469960 | 4.3:-36832604 | None:intergenic |
| CCATGTTATATTGTCATACC+AGG | 0.473885 | 4.3:+36834292 | MS.gene056598:CDS |
| GGTTTCAGCACATAAAGATC+AGG | 0.477024 | 4.3:-36835905 | None:intergenic |
| CGAAAAGAGGAGGAGAGAGA+GGG | 0.477617 | 4.3:+36836466 | MS.gene056598:CDS |
| GTTTGACTAGCCTGCTGACT+GGG | 0.479098 | 4.3:+36835363 | MS.gene056598:intron |
| TGAAGAACCTTTCGTTTCCA+TGG | 0.479653 | 4.3:-36835445 | None:intergenic |
| CAAGAGAAGAGGGCGAAAAG+AGG | 0.485876 | 4.3:+36836453 | MS.gene056598:CDS |
| TTTGAATTTCAGGTAAAGGC+TGG | 0.487948 | 4.3:+36836084 | MS.gene056598:intron |
| GCTCGAAGGGCAAGAGAAGA+GGG | 0.503612 | 4.3:+36836443 | MS.gene056598:CDS |
| ATGCAGTTTGATGTTTGGAC+CGG | 0.506719 | 4.3:+36834241 | MS.gene056598:intron |
| TGGTAGCATGTACACAGATT+GGG | 0.507286 | 4.3:+36834439 | MS.gene056598:CDS |
| TTCGGATCAGGAATTTCCGC+TGG | 0.508027 | 4.3:-36835215 | None:intergenic |
| GCAGTAGATATGGAGATAAG+AGG | 0.516281 | 4.3:+36836489 | MS.gene056598:CDS |
| GTTTGTGTACCACATAGATC+CGG | 0.516433 | 4.3:-36834260 | None:intergenic |
| TCTCTATCATCCCAATCTGC+TGG | 0.517078 | 4.3:-36834740 | None:intergenic |
| AAGATGGCTGGAAGAGTCGT+TGG | 0.518857 | 4.3:+36832514 | MS.gene056598:intron |
| GAAAAGAGGAGGAGAGAGAG+GGG | 0.519240 | 4.3:+36836467 | MS.gene056598:CDS |
| CAGGATATTGAGTGTGGTGG+TGG | 0.525477 | 4.3:+36833185 | MS.gene056598:CDS |
| ATCTGATTGGAAAAGGAGTG+AGG | 0.529753 | 4.3:+36832542 | MS.gene056598:CDS |
| GGCTCGAAGGGCAAGAGAAG+AGG | 0.530539 | 4.3:+36836442 | MS.gene056598:CDS |
| AATCAAGAACCCCAACTACA+AGG | 0.530823 | 4.3:+36835544 | MS.gene056598:CDS |
| AGATGGCTGGAAGAGTCGTT+GGG | 0.532596 | 4.3:+36832515 | MS.gene056598:intron |
| GGTACCTTTAAGTATACTGC+TGG | 0.536384 | 4.3:+36832573 | MS.gene056598:CDS |
| GACTGGGATGATGAAGATGA+TGG | 0.536970 | 4.3:+36835379 | MS.gene056598:CDS |
| ACCCCAACTACAAGGGAAAG+TGG | 0.537866 | 4.3:+36835552 | MS.gene056598:CDS |
| TAATAGGATAATTCTGCCCC+TGG | 0.538118 | 4.3:-36834310 | None:intergenic |
| CTCTTTCTCGATTATCGACA+AGG | 0.541665 | 4.3:-36834412 | None:intergenic |
| TTCGAAGAAGACTTCAGCAA+AGG | 0.543435 | 4.3:-36832345 | None:intergenic |
| CCTTCCTCCAAGGAAAATCA+AGG | 0.544194 | 4.3:+36834466 | MS.gene056598:CDS |
| TCTGATTGGAAAAGGAGTGA+GGG | 0.550580 | 4.3:+36832543 | MS.gene056598:CDS |
| GTCAATCAGAAGAAGTTTGG+CGG | 0.550880 | 4.3:+36833233 | MS.gene056598:CDS |
| GCAGAATTATCCTATTAGAA+AGG | 0.550971 | 4.3:+36834316 | MS.gene056598:CDS |
| AGGGAAAGTGGAAGACTCCA+TGG | 0.551615 | 4.3:+36835564 | MS.gene056598:CDS |
| AGGACACTATAGGAGGCATC+AGG | 0.553777 | 4.3:-36834392 | None:intergenic |
| TAATAGAATACTGAAGCACC+AGG | 0.555033 | 4.3:-36833154 | None:intergenic |
| TCTTCATCATCCCAGTCAGC+AGG | 0.556291 | 4.3:-36835373 | None:intergenic |
| TGTTGGCATTGAAGTGTGGC+AGG | 0.558687 | 4.3:+36835937 | MS.gene056598:CDS |
| GAGATAAGAGGCGCCGTAGG+AGG | 0.561496 | 4.3:+36836501 | MS.gene056598:CDS |
| AAAAGGAGTGAGGGAAAAGC+AGG | 0.562177 | 4.3:+36832552 | MS.gene056598:CDS |
| ATTTCTATACATTCATTCTG+AGG | 0.562782 | 4.3:+36834369 | MS.gene056598:CDS |
| ATGGAGATAAGAGGCGCCGT+AGG | 0.572887 | 4.3:+36836498 | MS.gene056598:CDS |
| AAGAAGGGCTCGGGAAGAAG+AGG | 0.584687 | 4.3:+36836320 | MS.gene056598:CDS |
| TAATTATGTAGGAGGCTCGA+AGG | 0.586649 | 4.3:+36836429 | MS.gene056598:intron |
| GTACCTGGGTTATCAATCCA+TGG | 0.586860 | 4.3:-36835581 | None:intergenic |
| GAGAAGAGGGCGAAAAGAGG+AGG | 0.590636 | 4.3:+36836456 | MS.gene056598:CDS |
| CCTTTGTTATCAGGATCACC+GGG | 0.599068 | 4.3:-36832603 | None:intergenic |
| TATACTGCTGGAAAATGGCC+CGG | 0.602890 | 4.3:+36832585 | MS.gene056598:CDS |
| ATCAAGAACCCCAACTACAA+GGG | 0.604238 | 4.3:+36835545 | MS.gene056598:CDS |
| AGAAAAGGCTTACCCTCCTA+CGG | 0.611772 | 4.3:-36836514 | None:intergenic |
| CTGAAACCAATAAAGTATGT+TGG | 0.613261 | 4.3:+36835920 | MS.gene056598:CDS |
| AGATAAGAGGCGCCGTAGGA+GGG | 0.614360 | 4.3:+36836502 | MS.gene056598:CDS |
| CCTGGTATGACAATATAACA+TGG | 0.616973 | 4.3:-36834292 | None:intergenic |
| AATTATGTAGGAGGCTCGAA+GGG | 0.625683 | 4.3:+36836430 | MS.gene056598:intron |
| TTCTTCGAAGAAACATTCCA+AGG | 0.625841 | 4.3:+36832359 | MS.gene056598:CDS |
| ATTGGGACATCCTTCCTCCA+AGG | 0.634489 | 4.3:+36834456 | MS.gene056598:CDS |
| ATCGACAAGGACACTATAGG+AGG | 0.637459 | 4.3:-36834399 | None:intergenic |
| ATGTTTGGACCGGATCTATG+TGG | 0.646001 | 4.3:+36834251 | MS.gene056598:CDS |
| CCTCTGGTTTGACATCATCA+GGG | 0.652041 | 4.3:-36834775 | None:intergenic |
| CATGTTATATTGTCATACCA+GGG | 0.660252 | 4.3:+36834293 | MS.gene056598:CDS |
| TTTGAACAGGATATTGAGTG+TGG | 0.661470 | 4.3:+36833179 | MS.gene056598:CDS |
| CAGAGGACCATGGAAACGAA+AGG | 0.663800 | 4.3:+36835438 | MS.gene056598:CDS |
| GGGATATGATTCAATTCCAG+CGG | 0.666694 | 4.3:+36835199 | MS.gene056598:intron |
| ATGTTATATTGTCATACCAG+GGG | 0.671492 | 4.3:+36834294 | MS.gene056598:CDS |
| CCCGGTGATCCTGATAACAA+AGG | 0.672010 | 4.3:+36832603 | MS.gene056598:CDS |
| ATCCAGCATACAGAGGACCA+TGG | 0.675114 | 4.3:+36835428 | MS.gene056598:CDS |
| CCCTGATGATGTCAAACCAG+AGG | 0.679467 | 4.3:+36834775 | MS.gene056598:CDS |
| ATTCCTAATCCAGCATACAG+AGG | 0.680448 | 4.3:+36835421 | MS.gene056598:CDS |
| GACCAATAAGAACAGAACCC+TGG | 0.691427 | 4.3:+36833136 | MS.gene056598:CDS |
| AGTATGTTGGCATTGAAGTG+TGG | 0.694735 | 4.3:+36835933 | MS.gene056598:CDS |
| GAACAGGATATTGAGTGTGG+TGG | 0.695916 | 4.3:+36833182 | MS.gene056598:CDS |
| AATAGAATACTGAAGCACCA+GGG | 0.711638 | 4.3:-36833153 | None:intergenic |
| ACTCCATGGATTGATAACCC+AGG | 0.732011 | 4.3:+36835578 | MS.gene056598:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTAT+TGG | - | chr4.3:36832496-36832515 | None:intergenic | 0.0% |
| !! | TTCAAATTATCAAAATATAA+CGG | - | chr4.3:36836070-36836089 | None:intergenic | 10.0% |
| !!! | TACTATAATATACTATTTTT+AGG | - | chr4.3:36835074-36835093 | None:intergenic | 10.0% |
| !!! | TTTTATATATATTTCCTTAA+AGG | - | chr4.3:36834943-36834962 | None:intergenic | 10.0% |
| !! | AAAATATTAAACACGAAAAA+AGG | - | chr4.3:36835343-36835362 | None:intergenic | 15.0% |
| !! | AAGAATATATGGTTAATAAT+AGG | + | chr4.3:36836166-36836185 | MS.gene056598:intron | 15.0% |
| !! | AGAATATATGGTTAATAATA+GGG | + | chr4.3:36836167-36836186 | MS.gene056598:intron | 15.0% |
| !! | ATAAAAATTTGTAATGTTTC+AGG | - | chr4.3:36835842-36835861 | None:intergenic | 15.0% |
| !! | ATAGTATATTATAGTAAGAA+TGG | + | chr4.3:36835078-36835097 | MS.gene056598:intron | 15.0% |
| !! | ATTTGATGTTATAATTATGT+AGG | + | chr4.3:36836418-36836437 | MS.gene056598:intron | 15.0% |
| !! | TAAAAATTTGTAATGTTTCA+GGG | - | chr4.3:36835841-36835860 | None:intergenic | 15.0% |
| !! | TACATAATTATAACATCAAA+TGG | - | chr4.3:36836419-36836438 | None:intergenic | 15.0% |
| !! | TATATATAAAATTAGAAACC+TGG | + | chr4.3:36834952-36834971 | MS.gene056598:intron | 15.0% |
| !!! | ATAATCATATTTGTTTTTGA+AGG | + | chr4.3:36836389-36836408 | MS.gene056598:intron | 15.0% |
| !!! | ATTTTGATAATTTGAATTTC+AGG | + | chr4.3:36836074-36836093 | MS.gene056598:intron | 15.0% |
| !!! | TAAATTTTCCTATTAAAAAG+AGG | - | chr4.3:36833538-36833557 | None:intergenic | 15.0% |
| !!! | TAATCATATTTGTTTTTGAA+GGG | + | chr4.3:36836390-36836409 | MS.gene056598:intron | 15.0% |
| !!! | TTATTCTTTTTAAGTTTTGT+CGG | + | chr4.3:36834994-36835013 | MS.gene056598:intron | 15.0% |
| !! | AAAAAAAAAAAAAAGATGGC+TGG | + | chr4.3:36832502-36832521 | MS.gene056598:intron | 20.0% |
| !! | AAAAATTTGTAATGTTTCAG+GGG | - | chr4.3:36835840-36835859 | None:intergenic | 20.0% |
| !! | AAACAACTCAAACATTATAT+AGG | + | chr4.3:36834639-36834658 | MS.gene056598:intron | 20.0% |
| !! | AAATTTACAATGACATTGTA+TGG | - | chr4.3:36835131-36835150 | None:intergenic | 20.0% |
| !! | AATGAAAAGTGATTATTAGA+AGG | - | chr4.3:36832322-36832341 | None:intergenic | 20.0% |
| !! | AATTTACAATGACATTGTAT+GGG | - | chr4.3:36835130-36835149 | None:intergenic | 20.0% |
| !! | AGTTGTTACAAACTAAATAA+CGG | - | chr4.3:36836226-36836245 | None:intergenic | 20.0% |
| !! | ATTGAATGTAATCAATGTAT+CGG | + | chr4.3:36834065-36834084 | MS.gene056598:intron | 20.0% |
| !! | CAAAATTTATGTATAGCATA+TGG | + | chr4.3:36835753-36835772 | MS.gene056598:intron | 20.0% |
| !! | GTATTCTATTAAATTTGAAC+AGG | + | chr4.3:36833166-36833185 | MS.gene056598:CDS | 20.0% |
| !! | TAAAATCAGTAATTACAAGA+AGG | - | chr4.3:36832707-36832726 | None:intergenic | 20.0% |
| !! | TATATATATTTCCTTAAAGG+TGG | - | chr4.3:36834940-36834959 | None:intergenic | 20.0% |
| !! | TTCTCAAATTATTATAGTGT+CGG | - | chr4.3:36834036-36834055 | None:intergenic | 20.0% |
| !!! | AATCATATTTGTTTTTGAAG+GGG | + | chr4.3:36836391-36836410 | MS.gene056598:intron | 20.0% |
| !!! | ATAATTTGAATTTCAGGTAA+AGG | + | chr4.3:36836080-36836099 | MS.gene056598:intron | 20.0% |
| !!! | ATGTCATTGTAAATTTTAGT+TGG | + | chr4.3:36835135-36835154 | MS.gene056598:intron | 20.0% |
| !!! | CATATGCTATACATAAATTT+TGG | - | chr4.3:36835755-36835774 | None:intergenic | 20.0% |
| !!! | TATTCTTTTTAAGTTTTGTC+GGG | + | chr4.3:36834995-36835014 | MS.gene056598:intron | 20.0% |
| !!! | TCTAATTTTGATCAAACAAA+AGG | + | chr4.3:36833489-36833508 | MS.gene056598:intron | 20.0% |
| !!! | TGTGTATTTTAATTGTTTTG+TGG | + | chr4.3:36833290-36833309 | MS.gene056598:intron | 20.0% |
| !!! | TTTTTTCATATAAGCTATTC+CGG | + | chr4.3:36832828-36832847 | MS.gene056598:intron | 20.0% |
| ! | AAAGACTGTAGAATAACTAT+CGG | - | chr4.3:36833817-36833836 | None:intergenic | 25.0% |
| ! | AACCAATGAGAGAAATTTAA+AGG | - | chr4.3:36833791-36833810 | None:intergenic | 25.0% |
| ! | AATTACAAGAAGGAATTCAA+TGG | - | chr4.3:36832697-36832716 | None:intergenic | 25.0% |
| ! | ACTAAATAAATACGCGTATT+TGG | + | chr4.3:36835293-36835312 | MS.gene056598:intron | 25.0% |
| ! | ACTTCTAAATTAGTGTTAGT+TGG | + | chr4.3:36834511-36834530 | MS.gene056598:intron | 25.0% |
| ! | AGCATTGTAACATTCAAATA+AGG | - | chr4.3:36834559-36834578 | None:intergenic | 25.0% |
| ! | ATAACACTAAAGGTCATATT+TGG | - | chr4.3:36833020-36833039 | None:intergenic | 25.0% |
| ! | ATATATGGTTAATAATAGGG+AGG | + | chr4.3:36836170-36836189 | MS.gene056598:intron | 25.0% |
| ! | ATATTTAAAAACAAGCAGAG+TGG | - | chr4.3:36835711-36835730 | None:intergenic | 25.0% |
| ! | ATCAAACTCTATAACACTAA+AGG | - | chr4.3:36833030-36833049 | None:intergenic | 25.0% |
| ! | ATCGTGTTAACTTTCTTTAT+TGG | + | chr4.3:36833866-36833885 | MS.gene056598:intron | 25.0% |
| ! | ATTTACAATGACATTGTATG+GGG | - | chr4.3:36835129-36835148 | None:intergenic | 25.0% |
| ! | ATTTCTATACATTCATTCTG+AGG | + | chr4.3:36834369-36834388 | MS.gene056598:CDS | 25.0% |
| ! | CACAAGTTATTTAATGTTGA+AGG | + | chr4.3:36834144-36834163 | MS.gene056598:intron | 25.0% |
| ! | GAGAGAAATTTAAAGGTAAA+TGG | - | chr4.3:36833784-36833803 | None:intergenic | 25.0% |
| ! | GCTTAAAAAATAATGTACCT+GGG | - | chr4.3:36835598-36835617 | None:intergenic | 25.0% |
| ! | TACCTTTAAATTTCTCTCAT+TGG | + | chr4.3:36833786-36833805 | MS.gene056598:intron | 25.0% |
| ! | TCCTATTAAAAAGAGGAAAT+AGG | - | chr4.3:36833531-36833550 | None:intergenic | 25.0% |
| ! | TGATGTTATAATTATGTAGG+AGG | + | chr4.3:36836421-36836440 | MS.gene056598:intron | 25.0% |
| ! | TGCTTAAAAAATAATGTACC+TGG | - | chr4.3:36835599-36835618 | None:intergenic | 25.0% |
| ! | TTCTGTTAGTTGATTAACAT+TGG | + | chr4.3:36832461-36832480 | MS.gene056598:intron | 25.0% |
| ! | TTTCTCTACCTTTAACTATT+GGG | + | chr4.3:36833834-36833853 | MS.gene056598:intron | 25.0% |
| !! | AACAAACAAACAAACCTTTT+TGG | - | chr4.3:36835243-36835262 | None:intergenic | 25.0% |
| !! | ACCTATTTCCTCTTTTTAAT+AGG | + | chr4.3:36833527-36833546 | MS.gene056598:intron | 25.0% |
| !! | GTTTGAGATTTAGAAATTCT+TGG | + | chr4.3:36833312-36833331 | MS.gene056598:intron | 25.0% |
| !! | TGTGATATTGAACTGTTTTA+AGG | + | chr4.3:36835656-36835675 | MS.gene056598:intron | 25.0% |
| !! | TTTTTCATATAAGCTATTCC+GGG | + | chr4.3:36832829-36832848 | MS.gene056598:intron | 25.0% |
| !!! | AGGTACATTATTTTTTAAGC+AGG | + | chr4.3:36835598-36835617 | MS.gene056598:intron | 25.0% |
| !!! | ATTCTTTTTAAGTTTTGTCG+GGG | + | chr4.3:36834996-36835015 | MS.gene056598:intron | 25.0% |
| AAAGGATCTTGAAAAGTCAA+AGG | - | chr4.3:36832427-36832446 | None:intergenic | 30.0% | |
| AAGAAATCAACGAACCTATA+AGG | - | chr4.3:36833266-36833285 | None:intergenic | 30.0% | |
| AAGGAACTTATCTTCTAACA+GGG | + | chr4.3:36833659-36833678 | MS.gene056598:intron | 30.0% | |
| ATATTGTGCATTTGAGTAAG+AGG | - | chr4.3:36832636-36832655 | None:intergenic | 30.0% | |
| ATCAGTGTAATGTATTGAGT+AGG | + | chr4.3:36834196-36834215 | MS.gene056598:intron | 30.0% | |
| ATGTATAGCATATGGACATA+TGG | + | chr4.3:36835761-36835780 | MS.gene056598:intron | 30.0% | |
| ATGTGCATGTAAAACCTTAA+TGG | + | chr4.3:36834833-36834852 | MS.gene056598:intron | 30.0% | |
| ATGTTATATTGTCATACCAG+GGG | + | chr4.3:36834294-36834313 | MS.gene056598:CDS | 30.0% | |
| ATTACACTGATAGAACAACT+AGG | - | chr4.3:36834187-36834206 | None:intergenic | 30.0% | |
| CATGTTATATTGTCATACCA+GGG | + | chr4.3:36834293-36834312 | MS.gene056598:CDS | 30.0% | |
| CTAATTGTCTTGATATTGCA+GGG | + | chr4.3:36835179-36835198 | MS.gene056598:intron | 30.0% | |
| CTGAAACCAATAAAGTATGT+TGG | + | chr4.3:36835920-36835939 | MS.gene056598:CDS | 30.0% | |
| CTGCAATAGAGGAAAAAAAA+AGG | - | chr4.3:36834720-36834739 | None:intergenic | 30.0% | |
| CTTTAGACTTGATATATGAC+AGG | - | chr4.3:36833757-36833776 | None:intergenic | 30.0% | |
| CTTTCTCTACCTTTAACTAT+TGG | + | chr4.3:36833833-36833852 | MS.gene056598:intron | 30.0% | |
| GAAGATTACCCAATAGTTAA+AGG | - | chr4.3:36833845-36833864 | None:intergenic | 30.0% | |
| GATTTAGAAATTCTTGGACT+TGG | + | chr4.3:36833318-36833337 | MS.gene056598:intron | 30.0% | |
| GCAAACAATAAAAAAGGCAA+AGG | - | chr4.3:36834813-36834832 | None:intergenic | 30.0% | |
| GCACATGCAAACAATAAAAA+AGG | - | chr4.3:36834819-36834838 | None:intergenic | 30.0% | |
| GCAGAATTATCCTATTAGAA+AGG | + | chr4.3:36834316-36834335 | MS.gene056598:CDS | 30.0% | |
| GCTTATACATAAGCACTTAT+AGG | - | chr4.3:36832773-36832792 | None:intergenic | 30.0% | |
| GGACAGTTTAATGATATGTT+TGG | - | chr4.3:36835734-36835753 | None:intergenic | 30.0% | |
| TATGTCAATCAGAAGAAGTT+TGG | + | chr4.3:36833230-36833249 | MS.gene056598:CDS | 30.0% | |
| TATTGTGCATTTGAGTAAGA+GGG | - | chr4.3:36832635-36832654 | None:intergenic | 30.0% | |
| TCAATGCCAACATACTTTAT+TGG | - | chr4.3:36835929-36835948 | None:intergenic | 30.0% | |
| TCAGTGTAATGTATTGAGTA+GGG | + | chr4.3:36834197-36834216 | MS.gene056598:intron | 30.0% | |
| TCATATGAGCGATAGATAAA+TGG | + | chr4.3:36834898-36834917 | MS.gene056598:intron | 30.0% | |
| TCTAATTGTCTTGATATTGC+AGG | + | chr4.3:36835178-36835197 | MS.gene056598:intron | 30.0% | |
| TGTTATTAGTTATTGCAGTC+TGG | + | chr4.3:36834594-36834613 | MS.gene056598:intron | 30.0% | |
| TTAAGTATACTGCTGGAAAA+TGG | + | chr4.3:36832580-36832599 | MS.gene056598:CDS | 30.0% | |
| TTATCCTATTAGAAAGGATC+TGG | + | chr4.3:36834322-36834341 | MS.gene056598:CDS | 30.0% | |
| ! | AGAAGTACACGAAAACATAA+AGG | - | chr4.3:36832445-36832464 | None:intergenic | 30.0% |
| ! | TCTTTATTGGTGCTTTAACA+TGG | + | chr4.3:36833879-36833898 | MS.gene056598:intron | 30.0% |
| ! | TTAAGCAGTTTTTCCAAACA+TGG | - | chr4.3:36832738-36832757 | None:intergenic | 30.0% |
| ! | TTTTCATATAAGCTATTCCG+GGG | + | chr4.3:36832830-36832849 | MS.gene056598:intron | 30.0% |
| ! | TTTTCCAGCAGTATACTTAA+AGG | - | chr4.3:36832580-36832599 | None:intergenic | 30.0% |
| !! | AAAAGAAGCTTTTGAAGAAG+CGG | + | chr4.3:36836290-36836309 | MS.gene056598:CDS | 30.0% |
| !!! | AAACAAACCTTTTTGGCTTT+CGG | - | chr4.3:36835236-36835255 | None:intergenic | 30.0% |
| AACCTTAATGACCACCTTTA+AGG | + | chr4.3:36834926-36834945 | MS.gene056598:intron | 35.0% | |
| AAGAAGCGGAAAAAGAAAGA+AGG | + | chr4.3:36836304-36836323 | MS.gene056598:CDS | 35.0% | |
| ACTTATTTCCATAAGTTCCC+CGG | - | chr4.3:36832850-36832869 | None:intergenic | 35.0% | |
| AGAAGCGGAAAAAGAAAGAA+GGG | + | chr4.3:36836305-36836324 | MS.gene056598:CDS | 35.0% | |
| AGAGATGATGAAGTTGAAGA+TGG | - | chr4.3:36832394-36832413 | None:intergenic | 35.0% | |
| ATGGTTAATAATAGGGAGGT+AGG | + | chr4.3:36836174-36836193 | MS.gene056598:intron | 35.0% | |
| ATTATCGACAAGGACACTAT+AGG | - | chr4.3:36834405-36834424 | None:intergenic | 35.0% | |
| CAAGGAACTTATCTTCTAAC+AGG | + | chr4.3:36833658-36833677 | MS.gene056598:intron | 35.0% | |
| CATGAAAGTTATCCATACCA+CGG | - | chr4.3:36834877-36834896 | None:intergenic | 35.0% | |
| CCATGTTATATTGTCATACC+AGG | + | chr4.3:36834292-36834311 | MS.gene056598:CDS | 35.0% | |
| CCTGGTATGACAATATAACA+TGG | - | chr4.3:36834295-36834314 | None:intergenic | 35.0% | |
| CTAAATTAGTGTTAGTTGGC+TGG | + | chr4.3:36834515-36834534 | MS.gene056598:intron | 35.0% | |
| CTTCTTCTGATTGACATAAC+CGG | - | chr4.3:36833228-36833247 | None:intergenic | 35.0% | |
| GAATTGACATTCATATCCCT+TGG | + | chr4.3:36835488-36835507 | MS.gene056598:intron | 35.0% | |
| GATAATCGAGAAAGAGATTC+TGG | + | chr4.3:36834419-36834438 | MS.gene056598:CDS | 35.0% | |
| GATCTTGAAAAGTCAAAGGT+AGG | - | chr4.3:36832423-36832442 | None:intergenic | 35.0% | |
| GCAAGTTGTGGAAGAATATA+TGG | + | chr4.3:36836155-36836174 | MS.gene056598:intron | 35.0% | |
| GCTTAATGCAGTTTGATGTT+TGG | + | chr4.3:36834236-36834255 | MS.gene056598:intron | 35.0% | |
| GGTGGGGAAAAAAATAATAG+AGG | - | chr4.3:36833426-36833445 | None:intergenic | 35.0% | |
| GGTTACATCAAACTTCTTTC+CGG | + | chr4.3:36833206-36833225 | MS.gene056598:CDS | 35.0% | |
| TAATGAAAGTGACTCTAACC+AGG | - | chr4.3:36834973-36834992 | None:intergenic | 35.0% | |
| TACCACGGTAAAATTCTTAC+AGG | - | chr4.3:36834862-36834881 | None:intergenic | 35.0% | |
| TATCCCTTGGTTTCTAATTG+TGG | + | chr4.3:36835501-36835520 | MS.gene056598:intron | 35.0% | |
| TCACATGACAAGATCATTGA+GGG | - | chr4.3:36833453-36833472 | None:intergenic | 35.0% | |
| TCATCATCAATGATGAGCAA+TGG | - | chr4.3:36833363-36833382 | None:intergenic | 35.0% | |
| TTCCTTAAAGGTGGTCATTA+AGG | - | chr4.3:36834931-36834950 | None:intergenic | 35.0% | |
| TTCTTCGAAGAAACATTCCA+AGG | + | chr4.3:36832359-36832378 | MS.gene056598:CDS | 35.0% | |
| TTGCCACAATTAGAAACCAA+GGG | - | chr4.3:36835507-36835526 | None:intergenic | 35.0% | |
| TTTGAACAGGATATTGAGTG+TGG | + | chr4.3:36833179-36833198 | MS.gene056598:CDS | 35.0% | |
| TTTGCCACAATTAGAAACCA+AGG | - | chr4.3:36835508-36835527 | None:intergenic | 35.0% | |
| TTTGTTTCCTGCAGAATTTG+AGG | + | chr4.3:36835877-36835896 | MS.gene056598:intron | 35.0% | |
| ! | AACAAAAGGCTATTCTGAAG+AGG | + | chr4.3:36833503-36833522 | MS.gene056598:intron | 35.0% |
| ! | AATAGAATACTGAAGCACCA+GGG | - | chr4.3:36833156-36833175 | None:intergenic | 35.0% |
| ! | AGAATAGTGCTGAAGCATTA+AGG | - | chr4.3:36836359-36836378 | None:intergenic | 35.0% |
| ! | GTAAGAATTTTACCGTGGTA+TGG | + | chr4.3:36834862-36834881 | MS.gene056598:intron | 35.0% |
| ! | TAATAGAATACTGAAGCACC+AGG | - | chr4.3:36833157-36833176 | None:intergenic | 35.0% |
| ! | TAGTGTTTTACGATTCTTGC+AGG | + | chr4.3:36833056-36833075 | MS.gene056598:intron | 35.0% |
| ! | TTGACATCCTTGATTTTCCT+TGG | - | chr4.3:36834476-36834495 | None:intergenic | 35.0% |
| ! | TTTGAATTTCAGGTAAAGGC+TGG | + | chr4.3:36836084-36836103 | MS.gene056598:intron | 35.0% |
| !! | ATGATGAAGATGATGGACTA+TGG | + | chr4.3:36835386-36835405 | MS.gene056598:CDS | 35.0% |
| !! | GGGTTTTATCTGATTGGAAA+AGG | + | chr4.3:36832535-36832554 | MS.gene056598:CDS | 35.0% |
| !! | GTATGCTGGATTAGGAATTT+TGG | - | chr4.3:36835419-36835438 | None:intergenic | 35.0% |
| !! | TCAACTTTGAAGCATTGACA+CGG | + | chr4.3:36833981-36834000 | MS.gene056598:intron | 35.0% |
| !! | TTTTAGCTACATGCCATGTT+TGG | + | chr4.3:36832722-36832741 | MS.gene056598:intron | 35.0% |
| !!! | TAAGCACTCGTGAGATTTTT+TGG | - | chr4.3:36832968-36832987 | None:intergenic | 35.0% |
| AATCAAGAACCCCAACTACA+AGG | + | chr4.3:36835544-36835563 | MS.gene056598:CDS | 40.0% | |
| AATTATGTAGGAGGCTCGAA+GGG | + | chr4.3:36836430-36836449 | MS.gene056598:intron | 40.0% | |
| ACAGTATGCAAAGCAAGTTG+TGG | + | chr4.3:36836143-36836162 | MS.gene056598:intron | 40.0% | |
| ATAGAACAACTAGGACAGTG+AGG | - | chr4.3:36834178-36834197 | None:intergenic | 40.0% | |
| ATCAAGAACCCCAACTACAA+GGG | + | chr4.3:36835545-36835564 | MS.gene056598:CDS | 40.0% | |
| ATCTGATTGGAAAAGGAGTG+AGG | + | chr4.3:36832542-36832561 | MS.gene056598:CDS | 40.0% | |
| ATGCAGTTTGATGTTTGGAC+CGG | + | chr4.3:36834241-36834260 | MS.gene056598:intron | 40.0% | |
| ATTCCTAATCCAGCATACAG+AGG | + | chr4.3:36835421-36835440 | MS.gene056598:CDS | 40.0% | |
| ATTCTTACAGGTGGCCATTA+AGG | - | chr4.3:36834850-36834869 | None:intergenic | 40.0% | |
| ATTGAGTAGGGTGAACTGAT+TGG | + | chr4.3:36834209-36834228 | MS.gene056598:intron | 40.0% | |
| ATTTCAGCAGTAGCAAAGTG+TGG | - | chr4.3:36833948-36833967 | None:intergenic | 40.0% | |
| CAAGGATGTCAAAGCGAAAA+AGG | + | chr4.3:36834484-36834503 | MS.gene056598:CDS | 40.0% | |
| CACATGACAAGATCATTGAG+GGG | - | chr4.3:36833452-36833471 | None:intergenic | 40.0% | |
| CACGGTAAAATTCTTACAGG+TGG | - | chr4.3:36834859-36834878 | None:intergenic | 40.0% | |
| CACTCCAGATCCTTTCTAAT+AGG | - | chr4.3:36834329-36834348 | None:intergenic | 40.0% | |
| CTCACATGACAAGATCATTG+AGG | - | chr4.3:36833454-36833473 | None:intergenic | 40.0% | |
| CTCTGGTATCTTTGCAGATA+TGG | - | chr4.3:36833114-36833133 | None:intergenic | 40.0% | |
| CTCTTTCTCGATTATCGACA+AGG | - | chr4.3:36834415-36834434 | None:intergenic | 40.0% | |
| CTGTTCTTATTGGTCAACTC+TGG | - | chr4.3:36833131-36833150 | None:intergenic | 40.0% | |
| CTTATCTTCTAACAGGGTCA+AGG | + | chr4.3:36833665-36833684 | MS.gene056598:intron | 40.0% | |
| GAAGATGGTTTCAGTTACCT+TGG | - | chr4.3:36832379-36832398 | None:intergenic | 40.0% | |
| GCAGTAGATATGGAGATAAG+AGG | + | chr4.3:36836489-36836508 | MS.gene056598:CDS | 40.0% | |
| GGGATATGATTCAATTCCAG+CGG | + | chr4.3:36835199-36835218 | MS.gene056598:intron | 40.0% | |
| GGTACCTTTAAGTATACTGC+TGG | + | chr4.3:36832573-36832592 | MS.gene056598:CDS | 40.0% | |
| GGTTTCAGCACATAAAGATC+AGG | - | chr4.3:36835908-36835927 | None:intergenic | 40.0% | |
| GTCAATCAGAAGAAGTTTGG+CGG | + | chr4.3:36833233-36833252 | MS.gene056598:CDS | 40.0% | |
| GTTTGTGTACCACATAGATC+CGG | - | chr4.3:36834263-36834282 | None:intergenic | 40.0% | |
| TAAATACGCGTATTTGGCAC+AGG | + | chr4.3:36835299-36835318 | MS.gene056598:intron | 40.0% | |
| TAATAGGATAATTCTGCCCC+TGG | - | chr4.3:36834313-36834332 | None:intergenic | 40.0% | |
| TAATTATGTAGGAGGCTCGA+AGG | + | chr4.3:36836429-36836448 | MS.gene056598:intron | 40.0% | |
| TCTGATTGGAAAAGGAGTGA+GGG | + | chr4.3:36832543-36832562 | MS.gene056598:CDS | 40.0% | |
| TGAAGAACCTTTCGTTTCCA+TGG | - | chr4.3:36835448-36835467 | None:intergenic | 40.0% | |
| TGCAGATATGGCAAAATGCT+TGG | - | chr4.3:36833102-36833121 | None:intergenic | 40.0% | |
| TGGTAGCATGTACACAGATT+GGG | + | chr4.3:36834439-36834458 | MS.gene056598:CDS | 40.0% | |
| TTCCACTTTCCCTTGTAGTT+GGG | - | chr4.3:36835557-36835576 | None:intergenic | 40.0% | |
| TTCGAAGAAGACTTCAGCAA+AGG | - | chr4.3:36832348-36832367 | None:intergenic | 40.0% | |
| ! | ACAACTTGCTTTGCATACTG+TGG | - | chr4.3:36836144-36836163 | None:intergenic | 40.0% |
| ! | ACATCCTTGATTTTCCTTGG+AGG | - | chr4.3:36834473-36834492 | None:intergenic | 40.0% |
| ! | ACCTTTGTTATCAGGATCAC+CGG | - | chr4.3:36832607-36832626 | None:intergenic | 40.0% |
| ! | AGTATGTTGGCATTGAAGTG+TGG | + | chr4.3:36835933-36835952 | MS.gene056598:CDS | 40.0% |
| ! | ATTGGTGCTTTAACATGGTC+AGG | + | chr4.3:36833884-36833903 | MS.gene056598:intron | 40.0% |
| ! | CAACTTGCTTTGCATACTGT+GGG | - | chr4.3:36836143-36836162 | None:intergenic | 40.0% |
| ! | CACCTGTAAGAATTTTACCG+TGG | + | chr4.3:36834857-36834876 | MS.gene056598:intron | 40.0% |
| ! | GTTTTGTCGGGGATCATAAA+TGG | + | chr4.3:36835007-36835026 | MS.gene056598:intron | 40.0% |
| ! | TATTGCAGTCTGGAACTCAA+AGG | + | chr4.3:36834604-36834623 | MS.gene056598:intron | 40.0% |
| !! | GAAGAAGAGGTAATGGATCA+AGG | + | chr4.3:36836333-36836352 | MS.gene056598:intron | 40.0% |
| !! | GCTGGATTAGGAATTTTGGA+AGG | - | chr4.3:36835415-36835434 | None:intergenic | 40.0% |
| !! | GTCGTTGGGTTTTATCTGAT+TGG | + | chr4.3:36832529-36832548 | MS.gene056598:CDS | 40.0% |
| !! | TAATCAATGTATCGGTGTCG+TGG | + | chr4.3:36834073-36834092 | MS.gene056598:intron | 40.0% |
| AAAAGGAGTGAGGGAAAAGC+AGG | + | chr4.3:36832552-36832571 | MS.gene056598:CDS | 45.0% | |
| AAGATCATTGAGGGGAATGG+TGG | - | chr4.3:36833444-36833463 | None:intergenic | 45.0% | |
| AAGCTATTCCGGGGAACTTA+TGG | + | chr4.3:36832839-36832858 | MS.gene056598:intron | 45.0% | |
| AAGGTGACAACAAGTACCTC+TGG | - | chr4.3:36834794-36834813 | None:intergenic | 45.0% | |
| AGATCATTGAGGGGAATGGT+GGG | - | chr4.3:36833443-36833462 | None:intergenic | 45.0% | |
| ATCGACAAGGACACTATAGG+AGG | - | chr4.3:36834402-36834421 | None:intergenic | 45.0% | |
| ATGTTTGGACCGGATCTATG+TGG | + | chr4.3:36834251-36834270 | MS.gene056598:CDS | 45.0% | |
| CACCAGGGTTCTGTTCTTAT+TGG | - | chr4.3:36833141-36833160 | None:intergenic | 45.0% | |
| CACGTAAGAGTTGAAGATGG+AGG | - | chr4.3:36833604-36833623 | None:intergenic | 45.0% | |
| CCTTCCTCCAAGGAAAATCA+AGG | + | chr4.3:36834466-36834485 | MS.gene056598:CDS | 45.0% | |
| CGGAAAAAGAAAGAAGGGCT+CGG | + | chr4.3:36836310-36836329 | MS.gene056598:CDS | 45.0% | |
| CTGGTAGCATGTACACAGAT+TGG | + | chr4.3:36834438-36834457 | MS.gene056598:CDS | 45.0% | |
| CTTCCACTTTCCCTTGTAGT+TGG | - | chr4.3:36835558-36835577 | None:intergenic | 45.0% | |
| GAACAGGATATTGAGTGTGG+TGG | + | chr4.3:36833182-36833201 | MS.gene056598:CDS | 45.0% | |
| GACAAGATCATTGAGGGGAA+TGG | - | chr4.3:36833447-36833466 | None:intergenic | 45.0% | |
| GACCAATAAGAACAGAACCC+TGG | + | chr4.3:36833136-36833155 | MS.gene056598:CDS | 45.0% | |
| GACTGGGATGATGAAGATGA+TGG | + | chr4.3:36835379-36835398 | MS.gene056598:CDS | 45.0% | |
| GGAAAAAGAAAGAAGGGCTC+GGG | + | chr4.3:36836311-36836330 | MS.gene056598:CDS | 45.0% | |
| GGACACGTAAGAGTTGAAGA+TGG | - | chr4.3:36833607-36833626 | None:intergenic | 45.0% | |
| GGATCATCCTCAAATTCTGC+AGG | - | chr4.3:36835887-36835906 | None:intergenic | 45.0% | |
| GTACCTGGGTTATCAATCCA+TGG | - | chr4.3:36835584-36835603 | None:intergenic | 45.0% | |
| GTAGTTCAAGTGGTTGAGCT+GGG | - | chr4.3:36833628-36833647 | None:intergenic | 45.0% | |
| GTGCATTTGAGTAAGAGGGT+AGG | - | chr4.3:36832631-36832650 | None:intergenic | 45.0% | |
| TATACTGCTGGAAAATGGCC+CGG | + | chr4.3:36832585-36832604 | MS.gene056598:CDS | 45.0% | |
| TCAGCTTCTTTGAGCTGTGA+TGG | + | chr4.3:36835789-36835808 | MS.gene056598:intron | 45.0% | |
| TCCACTTTCCCTTGTAGTTG+GGG | - | chr4.3:36835556-36835575 | None:intergenic | 45.0% | |
| TCCTGATCCGAAAGCCAAAA+AGG | + | chr4.3:36835226-36835245 | MS.gene056598:CDS | 45.0% | |
| TCTATTGCAGCCAGCAGATT+GGG | + | chr4.3:36834730-36834749 | MS.gene056598:intron | 45.0% | |
| TCTCTATCATCCCAATCTGC+TGG | - | chr4.3:36834743-36834762 | None:intergenic | 45.0% | |
| TTGGCGGTGATACTCCTTAT+AGG | + | chr4.3:36833249-36833268 | MS.gene056598:CDS | 45.0% | |
| ! | ACCTCTGGTTTGACATCATC+AGG | - | chr4.3:36834779-36834798 | None:intergenic | 45.0% |
| ! | ACTCCATGGATTGATAACCC+AGG | + | chr4.3:36835578-36835597 | MS.gene056598:CDS | 45.0% |
| ! | ACTCCTTTTCCCATTAGGTG+GGG | + | chr4.3:36833699-36833718 | MS.gene056598:intron | 45.0% |
| ! | CAACCACTCCTTTTCCCATT+AGG | + | chr4.3:36833694-36833713 | MS.gene056598:intron | 45.0% |
| ! | CACTCCTTTTCCCATTAGGT+GGG | + | chr4.3:36833698-36833717 | MS.gene056598:intron | 45.0% |
| ! | CCTCTGGTTTGACATCATCA+GGG | - | chr4.3:36834778-36834797 | None:intergenic | 45.0% |
| ! | CCTTGATTTTCCTTGGAGGA+AGG | - | chr4.3:36834469-36834488 | None:intergenic | 45.0% |
| ! | CCTTTGTTATCAGGATCACC+GGG | - | chr4.3:36832606-36832625 | None:intergenic | 45.0% |
| ! | GGGTAGGTACCTTTGTTATC+AGG | - | chr4.3:36832615-36832634 | None:intergenic | 45.0% |
| !!! | ACCTTTTTGGCTTTCGGATC+AGG | - | chr4.3:36835230-36835249 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAGA+TGG | + | chr4.3:36832498-36832517 | MS.gene056598:intron | 5.0% |
| AAGATGGCTGGAAGAGTCGT+TGG | + | chr4.3:36832514-36832533 | MS.gene056598:intron | 50.0% | |
| ACCCCAACTACAAGGGAAAG+TGG | + | chr4.3:36835552-36835571 | MS.gene056598:CDS | 50.0% | |
| AGAGAGAGGGGCAGTAGATA+TGG | + | chr4.3:36836479-36836498 | MS.gene056598:CDS | 50.0% | |
| AGATGGCTGGAAGAGTCGTT+GGG | + | chr4.3:36832515-36832534 | MS.gene056598:intron | 50.0% | |
| AGGGAAAGTGGAAGACTCCA+TGG | + | chr4.3:36835564-36835583 | MS.gene056598:CDS | 50.0% | |
| ATATAGCCGACCCCACCTAA+TGG | - | chr4.3:36833712-36833731 | None:intergenic | 50.0% | |
| ATCCAGCATACAGAGGACCA+TGG | + | chr4.3:36835428-36835447 | MS.gene056598:CDS | 50.0% | |
| ATTGGGACATCCTTCCTCCA+AGG | + | chr4.3:36834456-36834475 | MS.gene056598:CDS | 50.0% | |
| CAAGAGAAGAGGGCGAAAAG+AGG | + | chr4.3:36836453-36836472 | MS.gene056598:CDS | 50.0% | |
| CAGAGGACCATGGAAACGAA+AGG | + | chr4.3:36835438-36835457 | MS.gene056598:CDS | 50.0% | |
| CAGGATATTGAGTGTGGTGG+TGG | + | chr4.3:36833185-36833204 | MS.gene056598:CDS | 50.0% | |
| CCACCTAATGGGAAAAGGAG+TGG | - | chr4.3:36833700-36833719 | None:intergenic | 50.0% | |
| CCCGGTGATCCTGATAACAA+AGG | + | chr4.3:36832603-36832622 | MS.gene056598:CDS | 50.0% | |
| CGAAAAGAGGAGGAGAGAGA+GGG | + | chr4.3:36836466-36836485 | MS.gene056598:CDS | 50.0% | |
| CGTAGTTCAAGTGGTTGAGC+TGG | - | chr4.3:36833629-36833648 | None:intergenic | 50.0% | |
| CTCTATTGCAGCCAGCAGAT+TGG | + | chr4.3:36834729-36834748 | MS.gene056598:intron | 50.0% | |
| GAAAAGAGGAGGAGAGAGAG+GGG | + | chr4.3:36836467-36836486 | MS.gene056598:CDS | 50.0% | |
| GATCATTGAGGGGAATGGTG+GGG | - | chr4.3:36833442-36833461 | None:intergenic | 50.0% | |
| GGTCCTCTGTATGCTGGATT+AGG | - | chr4.3:36835427-36835446 | None:intergenic | 50.0% | |
| TATAGCCGACCCCACCTAAT+GGG | - | chr4.3:36833711-36833730 | None:intergenic | 50.0% | |
| TCTTCATCATCCCAGTCAGC+AGG | - | chr4.3:36835376-36835395 | None:intergenic | 50.0% | |
| TTCCATGGTCCTCTGTATGC+TGG | - | chr4.3:36835433-36835452 | None:intergenic | 50.0% | |
| TTCGGATCAGGAATTTCCGC+TGG | - | chr4.3:36835218-36835237 | None:intergenic | 50.0% | |
| ! | CAATCTGCTGGCTGCAATAG+AGG | - | chr4.3:36834731-36834750 | None:intergenic | 50.0% |
| ! | CCACTCCTTTTCCCATTAGG+TGG | + | chr4.3:36833697-36833716 | MS.gene056598:intron | 50.0% |
| ! | CCCTGATGATGTCAAACCAG+AGG | + | chr4.3:36834775-36834794 | MS.gene056598:CDS | 50.0% |
| ! | CTTTTCCCATTAGGTGGGGT+CGG | + | chr4.3:36833703-36833722 | MS.gene056598:intron | 50.0% |
| ! | TGTTGGCATTGAAGTGTGGC+AGG | + | chr4.3:36835937-36835956 | MS.gene056598:CDS | 50.0% |
| !! | AATGTATCGGTGTCGTGGCT+AGG | + | chr4.3:36834078-36834097 | MS.gene056598:intron | 50.0% |
| !! | AGGACACTATAGGAGGCATC+AGG | - | chr4.3:36834395-36834414 | None:intergenic | 50.0% |
| !! | GTTTGACTAGCCTGCTGACT+GGG | + | chr4.3:36835363-36835382 | MS.gene056598:intron | 50.0% |
| !! | TAGTGTCGGCGTTGCAATGT+TGG | - | chr4.3:36834022-36834041 | None:intergenic | 50.0% |
| !! | TGAAGCATTGACACGGACAC+CGG | + | chr4.3:36833988-36834007 | MS.gene056598:intron | 50.0% |
| !! | TGCAATGTTGGTGTCGTGTC+CGG | - | chr4.3:36834010-36834029 | None:intergenic | 50.0% |
| !! | TGTTTGACTAGCCTGCTGAC+TGG | + | chr4.3:36835362-36835381 | MS.gene056598:intron | 50.0% |
| AAGAAGGGCTCGGGAAGAAG+AGG | + | chr4.3:36836320-36836339 | MS.gene056598:CDS | 55.0% | |
| CCACTTGAACTACGCGCTGA+AGG | + | chr4.3:36833635-36833654 | MS.gene056598:intron | 55.0% | |
| CCTTCAGCGCGTAGTTCAAG+TGG | - | chr4.3:36833638-36833657 | None:intergenic | 55.0% | |
| CGACCCCACCTAATGGGAAA+AGG | - | chr4.3:36833705-36833724 | None:intergenic | 55.0% | |
| GAGAAGAGGGCGAAAAGAGG+AGG | + | chr4.3:36836456-36836475 | MS.gene056598:CDS | 55.0% | |
| GCGAAAAGAGGAGGAGAGAG+AGG | + | chr4.3:36836465-36836484 | MS.gene056598:CDS | 55.0% | |
| GCTCGAAGGGCAAGAGAAGA+GGG | + | chr4.3:36836443-36836462 | MS.gene056598:CDS | 55.0% | |
| GGCTCGGGAAGAAGAGGTAA+TGG | + | chr4.3:36836326-36836345 | MS.gene056598:intron | 55.0% | |
| TGAACTACGCGCTGAAGGCA+AGG | + | chr4.3:36833640-36833659 | MS.gene056598:intron | 55.0% | |
| !! | AGATAAGAGGCGCCGTAGGA+GGG | + | chr4.3:36836502-36836521 | MS.gene056598:CDS | 55.0% |
| !! | ATGGAGATAAGAGGCGCCGT+AGG | + | chr4.3:36836498-36836517 | MS.gene056598:CDS | 55.0% |
| GGCTCGAAGGGCAAGAGAAG+AGG | + | chr4.3:36836442-36836461 | MS.gene056598:CDS | 60.0% | |
| !! | GAGATAAGAGGCGCCGTAGG+AGG | + | chr4.3:36836501-36836520 | MS.gene056598:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 36832278 | 36836527 | 36832278 | ID=MS.gene056598 |
| chr4.3 | mRNA | 36832278 | 36836527 | 36832278 | ID=MS.gene056598.t1;Parent=MS.gene056598 |
| chr4.3 | exon | 36832278 | 36832380 | 36832278 | ID=MS.gene056598.t1.exon1;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36832278 | 36832380 | 36832278 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36832517 | 36832624 | 36832517 | ID=MS.gene056598.t1.exon2;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36832517 | 36832624 | 36832517 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36833078 | 36833270 | 36833078 | ID=MS.gene056598.t1.exon3;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36833078 | 36833270 | 36833078 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36834247 | 36834505 | 36834247 | ID=MS.gene056598.t1.exon4;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36834247 | 36834505 | 36834247 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36834740 | 36834796 | 36834740 | ID=MS.gene056598.t1.exon5;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36834740 | 36834796 | 36834740 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36835200 | 36835247 | 36835200 | ID=MS.gene056598.t1.exon6;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36835200 | 36835247 | 36835200 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36835373 | 36835459 | 36835373 | ID=MS.gene056598.t1.exon7;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36835373 | 36835459 | 36835373 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36835542 | 36835599 | 36835542 | ID=MS.gene056598.t1.exon8;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36835542 | 36835599 | 36835542 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36835891 | 36835958 | 36835891 | ID=MS.gene056598.t1.exon9;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36835891 | 36835958 | 36835891 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36836096 | 36836145 | 36836096 | ID=MS.gene056598.t1.exon10;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36836096 | 36836145 | 36836096 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36836285 | 36836341 | 36836285 | ID=MS.gene056598.t1.exon11;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36836285 | 36836341 | 36836285 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| chr4.3 | exon | 36836440 | 36836527 | 36836440 | ID=MS.gene056598.t1.exon12;Parent=MS.gene056598.t1 |
| chr4.3 | CDS | 36836440 | 36836527 | 36836440 | ID=cds.MS.gene056598.t1;Parent=MS.gene056598.t1 |
| Gene Sequence |
| Protein sequence |
