Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58838.t1 | XP_003624926.1 | 98.7 | 449 | 6 | 0 | 1 | 449 | 1 | 449 | 3.30E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58838.t1 | P29514 | 99.3 | 431 | 3 | 0 | 1 | 431 | 1 | 431 | 7.4e-258 | 890.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58838.t1 | G7L5V0 | 98.7 | 449 | 6 | 0 | 1 | 449 | 1 | 449 | 2.4e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049243 | MS.gene58838 | 0.822484 | 2.31E-53 | -1.69E-46 |
| MS.gene050630 | MS.gene58838 | 0.863408 | 2.54E-64 | -1.69E-46 |
| MS.gene050667 | MS.gene58838 | 0.819325 | 1.23E-52 | -1.69E-46 |
| MS.gene051067 | MS.gene58838 | 0.819721 | 1.00E-52 | -1.69E-46 |
| MS.gene051248 | MS.gene58838 | 0.809278 | 2.05E-50 | -1.69E-46 |
| MS.gene052156 | MS.gene58838 | 0.802599 | 5.20E-49 | -1.69E-46 |
| MS.gene052731 | MS.gene58838 | 0.806992 | 6.28E-50 | -1.69E-46 |
| MS.gene053500 | MS.gene58838 | 0.81485 | 1.25E-51 | -1.69E-46 |
| MS.gene056228 | MS.gene58838 | 0.833725 | 4.52E-56 | -1.69E-46 |
| MS.gene056396 | MS.gene58838 | 0.844898 | 5.68E-59 | -1.69E-46 |
| MS.gene056598 | MS.gene58838 | 0.829544 | 4.85E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene58838 | MS.gene34573 | PPI |
| MS.gene050630 | MS.gene58838 | PPI |
| MS.gene34503 | MS.gene58838 | PPI |
| MS.gene028342 | MS.gene58838 | PPI |
| MS.gene58838 | MS.gene024462 | PPI |
| MS.gene014419 | MS.gene58838 | PPI |
| MS.gene58838 | MS.gene025926 | PPI |
| MS.gene69089 | MS.gene58838 | PPI |
| MS.gene58838 | MS.gene22813 | PPI |
| MS.gene42253 | MS.gene58838 | PPI |
| MS.gene064762 | MS.gene58838 | PPI |
| MS.gene49099 | MS.gene58838 | PPI |
| MS.gene35118 | MS.gene58838 | PPI |
| MS.gene36449 | MS.gene58838 | PPI |
| MS.gene69396 | MS.gene58838 | PPI |
| MS.gene014578 | MS.gene58838 | PPI |
| MS.gene40225 | MS.gene58838 | PPI |
| MS.gene23930 | MS.gene58838 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58838.t1 | MTR_7g089120 | 99.109 | 449 | 4 | 0 | 1 | 449 | 1 | 449 | 0.0 | 940 |
| MS.gene58838.t1 | MTR_1g101130 | 97.209 | 430 | 12 | 0 | 1 | 430 | 1 | 430 | 0.0 | 856 |
| MS.gene58838.t1 | MTR_4g019090 | 96.512 | 430 | 15 | 0 | 1 | 430 | 1 | 430 | 0.0 | 853 |
| MS.gene58838.t1 | MTR_4g019110 | 95.814 | 430 | 18 | 0 | 1 | 430 | 1 | 430 | 0.0 | 848 |
| MS.gene58838.t1 | MTR_2g031310 | 95.349 | 430 | 20 | 0 | 1 | 430 | 1 | 430 | 0.0 | 845 |
| MS.gene58838.t1 | MTR_4g017630 | 94.186 | 430 | 25 | 0 | 1 | 430 | 1 | 430 | 0.0 | 837 |
| MS.gene58838.t1 | MTR_4g094535 | 93.953 | 430 | 26 | 0 | 1 | 430 | 1 | 430 | 0.0 | 834 |
| MS.gene58838.t1 | MTR_8g107250 | 91.461 | 445 | 36 | 2 | 1 | 443 | 1 | 445 | 0.0 | 833 |
| MS.gene58838.t1 | MTR_3g113970 | 93.519 | 432 | 26 | 1 | 1 | 430 | 1 | 432 | 0.0 | 832 |
| MS.gene58838.t1 | MTR_8g098360 | 92.326 | 430 | 33 | 0 | 1 | 430 | 1 | 430 | 0.0 | 823 |
| MS.gene58838.t1 | MTR_8g085980 | 41.244 | 434 | 245 | 3 | 1 | 424 | 1 | 434 | 1.01e-123 | 367 |
| MS.gene58838.t1 | MTR_1g106005 | 41.280 | 453 | 246 | 5 | 1 | 440 | 1 | 446 | 4.64e-123 | 365 |
| MS.gene58838.t1 | MTR_3g110720 | 41.648 | 437 | 239 | 4 | 1 | 424 | 1 | 434 | 5.70e-123 | 365 |
| MS.gene58838.t1 | MTR_4g097830 | 41.419 | 437 | 240 | 4 | 1 | 424 | 1 | 434 | 1.98e-122 | 364 |
| MS.gene58838.t1 | MTR_7g085800 | 40.553 | 434 | 248 | 3 | 1 | 424 | 1 | 434 | 5.68e-122 | 363 |
| MS.gene58838.t1 | MTR_6g029190 | 39.910 | 446 | 257 | 3 | 1 | 435 | 1 | 446 | 1.58e-119 | 356 |
| MS.gene58838.t1 | MTR_2g041670 | 36.784 | 454 | 271 | 6 | 1 | 445 | 1 | 447 | 2.09e-99 | 306 |
| MS.gene58838.t1 | MTR_2g041400 | 37.002 | 427 | 256 | 5 | 1 | 418 | 1 | 423 | 7.60e-96 | 295 |
| MS.gene58838.t1 | MTR_7g117050 | 34.932 | 438 | 268 | 7 | 2 | 423 | 3 | 439 | 7.34e-95 | 294 |
| MS.gene58838.t1 | MTR_3g063410 | 33.108 | 148 | 91 | 2 | 256 | 395 | 30 | 177 | 9.12e-27 | 107 |
| MS.gene58838.t1 | MTR_3g063410 | 31.111 | 135 | 85 | 2 | 269 | 395 | 4 | 138 | 9.28e-20 | 86.3 |
| MS.gene58838.t1 | MTR_4g093670 | 82.759 | 29 | 5 | 0 | 377 | 405 | 1 | 29 | 8.12e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58838.t1 | AT5G12250 | 98.423 | 444 | 7 | 0 | 1 | 444 | 1 | 444 | 0.0 | 926 |
| MS.gene58838.t1 | AT5G62700 | 96.279 | 430 | 16 | 0 | 1 | 430 | 1 | 430 | 0.0 | 853 |
| MS.gene58838.t1 | AT5G62690 | 96.279 | 430 | 16 | 0 | 1 | 430 | 1 | 430 | 0.0 | 853 |
| MS.gene58838.t1 | AT5G23860 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 852 |
| MS.gene58838.t1 | AT5G23860 | 96.744 | 430 | 14 | 0 | 1 | 430 | 1 | 430 | 0.0 | 852 |
| MS.gene58838.t1 | AT2G29550 | 95.824 | 431 | 18 | 0 | 1 | 431 | 1 | 431 | 0.0 | 847 |
| MS.gene58838.t1 | AT1G75780 | 92.889 | 450 | 27 | 2 | 1 | 449 | 1 | 446 | 0.0 | 833 |
| MS.gene58838.t1 | AT1G20010 | 93.039 | 431 | 29 | 1 | 1 | 430 | 1 | 431 | 0.0 | 830 |
| MS.gene58838.t1 | AT5G44340 | 92.558 | 430 | 32 | 0 | 1 | 430 | 1 | 430 | 0.0 | 828 |
| MS.gene58838.t1 | AT4G20890 | 92.558 | 430 | 32 | 0 | 1 | 430 | 1 | 430 | 0.0 | 825 |
| MS.gene58838.t1 | AT1G64740 | 41.244 | 434 | 245 | 3 | 1 | 424 | 1 | 434 | 3.68e-124 | 369 |
| MS.gene58838.t1 | AT5G19780 | 41.244 | 434 | 245 | 3 | 1 | 424 | 1 | 434 | 7.94e-124 | 367 |
| MS.gene58838.t1 | AT5G19770 | 41.244 | 434 | 245 | 3 | 1 | 424 | 1 | 434 | 7.94e-124 | 367 |
| MS.gene58838.t1 | AT1G04820 | 41.648 | 437 | 239 | 4 | 1 | 424 | 1 | 434 | 5.95e-122 | 363 |
| MS.gene58838.t1 | AT1G50010 | 41.648 | 437 | 239 | 4 | 1 | 424 | 1 | 434 | 5.95e-122 | 363 |
| MS.gene58838.t1 | AT4G14960 | 41.648 | 437 | 239 | 4 | 1 | 424 | 1 | 434 | 6.15e-122 | 363 |
| MS.gene58838.t1 | AT4G14960 | 41.645 | 389 | 211 | 4 | 1 | 376 | 1 | 386 | 2.78e-102 | 311 |
| MS.gene58838.t1 | AT5G05620 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 3.02e-95 | 295 |
| MS.gene58838.t1 | AT3G61650 | 35.160 | 438 | 267 | 7 | 2 | 423 | 3 | 439 | 4.44e-95 | 295 |
Find 131 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAGATCGGTTCAAAATTC+TGG | 0.202910 | 7.3:-20344043 | MS.gene58838:CDS |
| CCCTCGTCTGCACTTCTTCA+TGG | 0.225491 | 7.3:-20342406 | MS.gene58838:CDS |
| TCCATGGCCTCCACCTTTAT+TGG | 0.234232 | 7.3:-20342102 | MS.gene58838:CDS |
| ACACTTGATTTAACATTGTT+TGG | 0.235866 | 7.3:+20342150 | None:intergenic |
| TGAGATTCACAGCCAGTTTC+CGG | 0.253872 | 7.3:+20342436 | None:intergenic |
| TCACTGCTTCTGCCATGTTC+AGG | 0.262035 | 7.3:-20342254 | MS.gene58838:CDS |
| CATTTGCTCATCCACCTCTT+TGG | 0.277735 | 7.3:+20342218 | None:intergenic |
| CACATCTGCTGGGTGAGTTC+TGG | 0.279765 | 7.3:+20342327 | None:intergenic |
| TGGTAACTCAACCTCAATTC+AGG | 0.292483 | 7.3:-20342082 | MS.gene58838:CDS |
| AGCAGCACACATCATGTTCT+TGG | 0.331795 | 7.3:+20342299 | None:intergenic |
| TGACCGAAGACGAAGTTATC+AGG | 0.336132 | 7.3:+20343825 | None:intergenic |
| TGAGGTTGAGTTACCAATAA+AGG | 0.339217 | 7.3:+20342089 | None:intergenic |
| TCCTTTCGCCCAATTGTTAC+CGG | 0.341476 | 7.3:+20343794 | None:intergenic |
| CCTCAATTCAGGAAATGTTT+AGG | 0.342965 | 7.3:-20342071 | MS.gene58838:CDS |
| TCTTGGAATCCCACATCTGC+TGG | 0.346211 | 7.3:+20342316 | None:intergenic |
| CGCTTTATGATATCTGCTTC+AGG | 0.346443 | 7.3:-20343378 | MS.gene58838:CDS |
| AGTCCGGTGCCGGTAACAAT+TGG | 0.346744 | 7.3:-20343803 | MS.gene58838:CDS |
| GTTTCAGGTGTGTCATTCAT+TGG | 0.347553 | 7.3:-20343599 | MS.gene58838:CDS |
| GAGAATTGTGATTGTCTTCA+AGG | 0.350951 | 7.3:-20343711 | MS.gene58838:intron |
| CACTTGATTTAACATTGTTT+GGG | 0.358488 | 7.3:+20342151 | None:intergenic |
| TTGGGAGGAGGAACGGGATC+TGG | 0.367167 | 7.3:-20343580 | MS.gene58838:CDS |
| CAACTCTGATCTCCGGAAAC+TGG | 0.369333 | 7.3:-20342448 | MS.gene58838:CDS |
| ACAGAAAGAGTAGCATTATA+AGG | 0.371726 | 7.3:+20343451 | None:intergenic |
| TTTCAGGTGTGTCATTCATT+GGG | 0.392158 | 7.3:-20343598 | MS.gene58838:CDS |
| AGTAGGAAGAGTTCTTGTTC+TGG | 0.394999 | 7.3:+20342187 | None:intergenic |
| AGCAATTTACTGCTATGTTT+AGG | 0.401883 | 7.3:-20342038 | MS.gene58838:CDS |
| CACTGCTTCTGCCATGTTCA+GGG | 0.405397 | 7.3:-20342253 | MS.gene58838:CDS |
| CCTAAACATTTCCTGAATTG+AGG | 0.415373 | 7.3:+20342071 | None:intergenic |
| CGCCCAATTGTTACCGGCAC+CGG | 0.422209 | 7.3:+20343800 | None:intergenic |
| ACTTGCTGTCTTCGTTTCCC+TGG | 0.423010 | 7.3:-20342477 | MS.gene58838:CDS |
| AGAGAAATTCTTCATGTTCA+AGG | 0.425268 | 7.3:-20344080 | MS.gene58838:CDS |
| TGAGTTTCCGACGTATCTTC+CGG | 0.427531 | 7.3:+20343986 | None:intergenic |
| CCAGATCGGTTCAAAATTCT+GGG | 0.430206 | 7.3:-20344042 | MS.gene58838:CDS |
| ACGCGCCATCCTCATGGACT+TGG | 0.430677 | 7.3:-20343901 | MS.gene58838:CDS |
| AACGTCAACATCATCCTATC+AGG | 0.441581 | 7.3:+20343517 | None:intergenic |
| CATTCATTGGGAGGAGGAAC+GGG | 0.442118 | 7.3:-20343586 | MS.gene58838:CDS |
| AACTTCGTCTTCGGTCAGTC+CGG | 0.442188 | 7.3:-20343819 | MS.gene58838:CDS |
| CGTCTGCACTTCTTCATGGT+CGG | 0.448628 | 7.3:-20342402 | MS.gene58838:CDS |
| TACTCTTTCTGTTCATCAGT+TGG | 0.454328 | 7.3:-20343440 | MS.gene58838:CDS |
| ACCAATAAAGGTGGAGGCCA+TGG | 0.456675 | 7.3:+20342101 | None:intergenic |
| AGGAGGAACGGGATCTGGAA+TGG | 0.458058 | 7.3:-20343575 | MS.gene58838:CDS |
| CAGTGGCATCCTGGTACTGC+TGG | 0.458734 | 7.3:+20341920 | None:intergenic |
| ATCCTCATGGACTTGGAGCC+TGG | 0.462721 | 7.3:-20343894 | MS.gene58838:CDS |
| TACTGCTATGTTTAGGAGGA+AGG | 0.463039 | 7.3:-20342031 | MS.gene58838:CDS |
| GGAGGAACGGGATCTGGAAT+GGG | 0.463459 | 7.3:-20343574 | MS.gene58838:CDS |
| GGACTTGGAGCCTGGTACAA+TGG | 0.467426 | 7.3:-20343886 | MS.gene58838:CDS |
| CGTCCTGATAACTTCGTCTT+CGG | 0.467522 | 7.3:-20343828 | MS.gene58838:CDS |
| CTTCATCAGCAGTGGCATCC+TGG | 0.470075 | 7.3:+20341911 | None:intergenic |
| TTCGGTGTTTCCTTCACCGA+AGG | 0.475471 | 7.3:-20343494 | MS.gene58838:CDS |
| AAGAAGTGCAGACGAGGGAA+TGG | 0.475598 | 7.3:+20342411 | None:intergenic |
| GGAGGAAGGCTTTCTTGCAT+TGG | 0.483915 | 7.3:-20342017 | MS.gene58838:CDS |
| GTCTTCGGTCAGTCCGGTGC+CGG | 0.488348 | 7.3:-20343813 | MS.gene58838:CDS |
| GTCCGGTGCCGGTAACAATT+GGG | 0.494376 | 7.3:-20343802 | MS.gene58838:CDS |
| GCTTTCTTGCATTGGTACAC+TGG | 0.499379 | 7.3:-20342009 | MS.gene58838:CDS |
| TGTTCCACGCGCCATCCTCA+TGG | 0.500720 | 7.3:-20343907 | MS.gene58838:CDS |
| CAGAACTCACCCAGCAGATG+TGG | 0.503870 | 7.3:-20342326 | MS.gene58838:CDS |
| TTAGAGAGGAATATCCTGAT+AGG | 0.506228 | 7.3:-20343531 | MS.gene58838:CDS |
| GTCAACTCAACTCTGATCTC+CGG | 0.506307 | 7.3:-20342455 | MS.gene58838:CDS |
| TGATGTGTGCTGCTGATCCT+AGG | 0.510462 | 7.3:-20342290 | MS.gene58838:CDS |
| AGATCAGAGTTGAGTTGACC+AGG | 0.512852 | 7.3:+20342459 | None:intergenic |
| CAGGTGTGTCATTCATTGGG+AGG | 0.513562 | 7.3:-20343595 | MS.gene58838:CDS |
| TTGCATTGGTACACTGGTGA+AGG | 0.524227 | 7.3:-20342003 | MS.gene58838:CDS |
| AGAAGTGCAGACGAGGGAAT+GGG | 0.530868 | 7.3:+20342412 | None:intergenic |
| CGAACACTGTCCATTGTACC+AGG | 0.531519 | 7.3:+20343876 | None:intergenic |
| TCATTCATTGGGAGGAGGAA+CGG | 0.532913 | 7.3:-20343587 | MS.gene58838:CDS |
| TGATGAAGAAGGAGAATATG+AGG | 0.535322 | 7.3:-20341896 | MS.gene58838:CDS |
| CTTGGAATCCCACATCTGCT+GGG | 0.536021 | 7.3:+20342317 | None:intergenic |
| GTCTGAGTACCAGCAGTACC+AGG | 0.537588 | 7.3:-20341929 | MS.gene58838:CDS |
| TTTCCGACGTATCTTCCGGT+TGG | 0.537588 | 7.3:+20343990 | None:intergenic |
| ACTCTTCCTACTTTGTTGAG+TGG | 0.537980 | 7.3:-20342176 | MS.gene58838:CDS |
| AGAAAATGCTGATGAGTGTA+TGG | 0.538616 | 7.3:-20343416 | MS.gene58838:CDS |
| GATGCCACTGCTGATGAAGA+AGG | 0.543436 | 7.3:-20341907 | MS.gene58838:CDS |
| GCCGGTAACAATTGGGCGAA+AGG | 0.544358 | 7.3:-20343795 | MS.gene58838:CDS |
| AGTGTTCGCACTGGTCCTTA+CGG | 0.544816 | 7.3:-20343861 | MS.gene58838:CDS |
| CACGGTATTGCTGAGAGCCA+CGG | 0.544884 | 7.3:+20342361 | None:intergenic |
| ATGTTCAAGGAGGACAATGC+GGG | 0.546684 | 7.3:-20344067 | MS.gene58838:CDS |
| AATTTACTGCTATGTTTAGG+AGG | 0.549323 | 7.3:-20342035 | MS.gene58838:CDS |
| TGGTGAAGGCATGGATGAGA+TGG | 0.552982 | 7.3:-20341989 | MS.gene58838:CDS |
| ACGGTATTGCTGAGAGCCAC+GGG | 0.554335 | 7.3:+20342362 | None:intergenic |
| ATATGAGGACGAAGAGGACG+AGG | 0.557142 | 7.3:-20341881 | MS.gene58838:CDS |
| GTGAGGTAGCGACCATGCCT+AGG | 0.560055 | 7.3:+20342273 | None:intergenic |
| TTCTCCTTCTTCATCAGCAG+TGG | 0.564039 | 7.3:+20341903 | None:intergenic |
| CAATTCAGGAAATGTTTAGG+AGG | 0.566101 | 7.3:-20342068 | MS.gene58838:CDS |
| ACCATGAAGAAGTGCAGACG+AGG | 0.568203 | 7.3:+20342405 | None:intergenic |
| TGCTCCTCGAGGTCTCTCCA+TGG | 0.570432 | 7.3:-20342118 | MS.gene58838:CDS |
| GTATCAGAAACCTTCGGTGA+AGG | 0.572045 | 7.3:+20343484 | None:intergenic |
| GTTGATTTCGAAGATTAGAG+AGG | 0.576526 | 7.3:-20343545 | MS.gene58838:CDS |
| TGGGATCCACTCAACAAAGT+AGG | 0.583322 | 7.3:+20342170 | None:intergenic |
| ACAACAGTATCAGAAACCTT+CGG | 0.584973 | 7.3:+20343478 | None:intergenic |
| TTGGTACACTGGTGAAGGCA+TGG | 0.586360 | 7.3:-20341998 | MS.gene58838:CDS |
| TGAGTTACCAATAAAGGTGG+AGG | 0.588019 | 7.3:+20342095 | None:intergenic |
| GAGCACGGCATAGATCCAAC+CGG | 0.589745 | 7.3:-20344005 | MS.gene58838:CDS |
| GAAGTAGTTTGCGACGAGCA+CGG | 0.593265 | 7.3:-20344020 | MS.gene58838:CDS |
| ACAACGAAGCCTCCTGTGGA+AGG | 0.594540 | 7.3:-20343932 | MS.gene58838:CDS |
| GTGTGTCATTCATTGGGAGG+AGG | 0.596369 | 7.3:-20343592 | MS.gene58838:CDS |
| ACTGCTTCTGCCATGTTCAG+GGG | 0.596534 | 7.3:-20342252 | MS.gene58838:CDS |
| GGACAATGCGGGAACCAGAT+CGG | 0.597537 | 7.3:-20344056 | MS.gene58838:CDS |
| TTTGCTCCTCTCACATCCCG+TGG | 0.599145 | 7.3:-20342378 | MS.gene58838:CDS |
| TTGATCTCAGCAACCATGAG+TGG | 0.599833 | 7.3:-20342504 | MS.gene58838:CDS |
| TCATGGTTGCTGAGATCAAG+TGG | 0.601262 | 7.3:+20342508 | None:intergenic |
| GCGTGGAACAAACCTTCCAC+AGG | 0.601663 | 7.3:+20343920 | None:intergenic |
| TAAGATGAGCACCAAAGAGG+TGG | 0.605176 | 7.3:-20342229 | MS.gene58838:CDS |
| GGTTGAGTTACCAATAAAGG+TGG | 0.607360 | 7.3:+20342092 | None:intergenic |
| AATTCAGGAAATGTTTAGGA+GGG | 0.609115 | 7.3:-20342067 | MS.gene58838:CDS |
| ACAATGGACAGTGTTCGCAC+TGG | 0.609664 | 7.3:-20343870 | MS.gene58838:CDS |
| ACAGCAAGTCACTCCACTCA+TGG | 0.610966 | 7.3:+20342491 | None:intergenic |
| GCTCATCTTACCCCTGAACA+TGG | 0.612907 | 7.3:+20342242 | None:intergenic |
| AGGCTCCAAGTCCATGAGGA+TGG | 0.616165 | 7.3:+20343896 | None:intergenic |
| AGAACTCACCCAGCAGATGT+GGG | 0.617381 | 7.3:-20342325 | MS.gene58838:CDS |
| TGTGCTGCTGATCCTAGGCA+TGG | 0.620259 | 7.3:-20342285 | MS.gene58838:CDS |
| GCGAAAGGACATTATACTGA+AGG | 0.631149 | 7.3:-20343780 | MS.gene58838:CDS |
| GGACGGAAGATCTGACCGTA+AGG | 0.631185 | 7.3:+20343846 | None:intergenic |
| GTTTGTGACATTGCTCCTCG+AGG | 0.633730 | 7.3:-20342129 | MS.gene58838:CDS |
| TACTACAACGAAGCCTCCTG+TGG | 0.636492 | 7.3:-20343936 | MS.gene58838:CDS |
| AAGTCCATGAGGATGGCGCG+TGG | 0.636612 | 7.3:+20343903 | None:intergenic |
| TGAGAGCCACGGGATGTGAG+AGG | 0.640513 | 7.3:+20342372 | None:intergenic |
| TGGAACAAACCTTCCACAGG+AGG | 0.640659 | 7.3:+20343923 | None:intergenic |
| GTGTATGGTTCTTGATAATG+AGG | 0.647671 | 7.3:-20343401 | MS.gene58838:CDS |
| AGGAGAATATGAGGACGAAG+AGG | 0.649551 | 7.3:-20341887 | MS.gene58838:CDS |
| CATGTTCAAGGAGGACAATG+CGG | 0.653004 | 7.3:-20344068 | MS.gene58838:CDS |
| GAGGCCATGGAGAGACCTCG+AGG | 0.661607 | 7.3:+20342114 | None:intergenic |
| GATCAGAGTTGAGTTGACCA+GGG | 0.663540 | 7.3:+20342460 | None:intergenic |
| CCATGAAGAAGTGCAGACGA+GGG | 0.668664 | 7.3:+20342406 | None:intergenic |
| GGGTAAGATGAGCACCAAAG+AGG | 0.672077 | 7.3:-20342232 | MS.gene58838:CDS |
| CGAAGACGAAGTTATCAGGA+CGG | 0.676420 | 7.3:+20343829 | None:intergenic |
| GAAATTCTTCATGTTCAAGG+AGG | 0.679770 | 7.3:-20344077 | MS.gene58838:CDS |
| GTTCTGGAACAGTCAATGCA+CGG | 0.686386 | 7.3:+20342343 | None:intergenic |
| TACCAGGCTCCAAGTCCATG+AGG | 0.693763 | 7.3:+20343892 | None:intergenic |
| GATCCAACCGGAAGATACGT+CGG | 0.698972 | 7.3:-20343993 | MS.gene58838:CDS |
| TGAACATGGCAGAAGCAGTG+AGG | 0.715259 | 7.3:+20342256 | None:intergenic |
| ACTGCTGGTACTCAGACACG+AGG | 0.785475 | 7.3:+20341935 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATAATAACATTAAAA+TGG | + | chr7.3:20342971-20342990 | None:intergenic | 10.0% |
| !! | AAATTAGTCAGATTAAATTT+AGG | + | chr7.3:20343301-20343320 | None:intergenic | 15.0% |
| !! | TAAACTTATATTTACACTTT+GGG | - | chr7.3:20343087-20343106 | MS.gene58838:intron | 15.0% |
| !! | TTAAACTTATATTTACACTT+TGG | - | chr7.3:20343086-20343105 | MS.gene58838:intron | 15.0% |
| !!! | TGATTTTGTGATTTTTTTTA+GGG | - | chr7.3:20342320-20342339 | MS.gene58838:CDS | 15.0% |
| !! | AATTTGATTGTTCACAAATT+GGG | - | chr7.3:20343335-20343354 | MS.gene58838:intron | 20.0% |
| !! | TTGTAGTAATTATTGAATAG+TGG | - | chr7.3:20342748-20342767 | MS.gene58838:intron | 20.0% |
| !!! | GTGATTTTGTGATTTTTTTT+AGG | - | chr7.3:20342319-20342338 | MS.gene58838:CDS | 20.0% |
| ! | ACACTTGATTTAACATTGTT+TGG | + | chr7.3:20343794-20343813 | None:intergenic | 25.0% |
| ! | CACTTGATTTAACATTGTTT+GGG | + | chr7.3:20343793-20343812 | None:intergenic | 25.0% |
| ! | GAATTTGATTGTTCACAAAT+TGG | - | chr7.3:20343334-20343353 | MS.gene58838:intron | 25.0% |
| ! | TGAAAATCTTGATTCTGTTA+TGG | - | chr7.3:20342275-20342294 | MS.gene58838:CDS | 25.0% |
| !!! | ATGTTCATGATTCATTTTTC+TGG | - | chr7.3:20343203-20343222 | MS.gene58838:intron | 25.0% |
| !!! | GTCAGATTAGTTTTCTATTT+TGG | - | chr7.3:20342842-20342861 | MS.gene58838:intron | 25.0% |
| !!! | TCATTTTTCTGGTTCAATTA+TGG | - | chr7.3:20343214-20343233 | MS.gene58838:intron | 25.0% |
| AAATCTTGATTCTGTTATGG+CGG | - | chr7.3:20342278-20342297 | MS.gene58838:CDS | 30.0% | |
| AATTCAGGAAATGTTTAGGA+GGG | - | chr7.3:20343874-20343893 | MS.gene58838:CDS | 30.0% | |
| AATTTACTGCTATGTTTAGG+AGG | - | chr7.3:20343906-20343925 | MS.gene58838:CDS | 30.0% | |
| ACAGAAAGAGTAGCATTATA+AGG | + | chr7.3:20342493-20342512 | None:intergenic | 30.0% | |
| AGAGAAATTCTTCATGTTCA+AGG | - | chr7.3:20341861-20341880 | MS.gene58838:CDS | 30.0% | |
| AGCAATTTACTGCTATGTTT+AGG | - | chr7.3:20343903-20343922 | MS.gene58838:CDS | 30.0% | |
| ATGTATTCAGTTTACTGATC+TGG | - | chr7.3:20343014-20343033 | MS.gene58838:intron | 30.0% | |
| ATTAGTTAGATCAGACTTCT+TGG | - | chr7.3:20342721-20342740 | MS.gene58838:intron | 30.0% | |
| TGGTGATTCTTAACTACTAA+TGG | - | chr7.3:20343234-20343253 | MS.gene58838:intron | 30.0% | |
| ! | CAATCACACATTTTCAGTAA+TGG | + | chr7.3:20343390-20343409 | None:intergenic | 30.0% |
| ! | TTTTCTCATTGAGCACTTTT+CGG | - | chr7.3:20343263-20343282 | MS.gene58838:intron | 30.0% |
| ! | TTTTTCGTTGTTCATCACTA+GGG | - | chr7.3:20342647-20342666 | MS.gene58838:intron | 30.0% |
| !!! | GTGATTTTTTTTAGGGTTTC+AGG | - | chr7.3:20342327-20342346 | MS.gene58838:CDS | 30.0% |
| ACAACAGTATCAGAAACCTT+CGG | + | chr7.3:20342466-20342485 | None:intergenic | 35.0% | |
| AGAAAATGCTGATGAGTGTA+TGG | - | chr7.3:20342525-20342544 | MS.gene58838:intron | 35.0% | |
| AGAGAAAAATACTCACAGCT+AGG | + | chr7.3:20342607-20342626 | None:intergenic | 35.0% | |
| AGTTTACTGATCTGGTTAGT+GGG | - | chr7.3:20343022-20343041 | MS.gene58838:intron | 35.0% | |
| CAATTCAGGAAATGTTTAGG+AGG | - | chr7.3:20343873-20343892 | MS.gene58838:CDS | 35.0% | |
| CCTAAACATTTCCTGAATTG+AGG | + | chr7.3:20343873-20343892 | None:intergenic | 35.0% | |
| CCTCAATTCAGGAAATGTTT+AGG | - | chr7.3:20343870-20343889 | MS.gene58838:CDS | 35.0% | |
| GAAATTCTTCATGTTCAAGG+AGG | - | chr7.3:20341864-20341883 | MS.gene58838:CDS | 35.0% | |
| GAGAATTGTGATTGTCTTCA+AGG | - | chr7.3:20342230-20342249 | MS.gene58838:CDS | 35.0% | |
| TACTCTTTCTGTTCATCAGT+TGG | - | chr7.3:20342501-20342520 | MS.gene58838:CDS | 35.0% | |
| TGAGGTTGAGTTACCAATAA+AGG | + | chr7.3:20343855-20343874 | None:intergenic | 35.0% | |
| TGATGAAGAAGGAGAATATG+AGG | - | chr7.3:20344045-20344064 | MS.gene58838:CDS | 35.0% | |
| TTAGAGAGGAATATCCTGAT+AGG | - | chr7.3:20342410-20342429 | MS.gene58838:CDS | 35.0% | |
| ! | GTTGATTTCGAAGATTAGAG+AGG | - | chr7.3:20342396-20342415 | MS.gene58838:CDS | 35.0% |
| ! | TAGGATGATGTTGACGTTTT+CGG | - | chr7.3:20342429-20342448 | MS.gene58838:CDS | 35.0% |
| ! | TGACTGATTCTAGATGTTCA+AGG | - | chr7.3:20342920-20342939 | MS.gene58838:intron | 35.0% |
| ! | TTTCAGGTGTGTCATTCATT+GGG | - | chr7.3:20342343-20342362 | MS.gene58838:CDS | 35.0% |
| ! | TTTTCGTTGTTCATCACTAG+GGG | - | chr7.3:20342648-20342667 | MS.gene58838:intron | 35.0% |
| !! | AAGCGTTGAACAATTGCAAT+AGG | + | chr7.3:20343129-20343148 | None:intergenic | 35.0% |
| !! | CTTTTTCGTTGTTCATCACT+AGG | - | chr7.3:20342646-20342665 | MS.gene58838:intron | 35.0% |
| !! | GTGTATGGTTCTTGATAATG+AGG | - | chr7.3:20342540-20342559 | MS.gene58838:intron | 35.0% |
| AACGTCAACATCATCCTATC+AGG | + | chr7.3:20342427-20342446 | None:intergenic | 40.0% | |
| ACTCTTCCTACTTTGTTGAG+TGG | - | chr7.3:20343765-20343784 | MS.gene58838:CDS | 40.0% | |
| AGTAGGAAGAGTTCTTGTTC+TGG | + | chr7.3:20343757-20343776 | None:intergenic | 40.0% | |
| CAGTTTACTGATCTGGTTAG+TGG | - | chr7.3:20343021-20343040 | MS.gene58838:intron | 40.0% | |
| CGCTTTATGATATCTGCTTC+AGG | - | chr7.3:20342563-20342582 | MS.gene58838:intron | 40.0% | |
| GCGAAAGGACATTATACTGA+AGG | - | chr7.3:20342161-20342180 | MS.gene58838:CDS | 40.0% | |
| GGTTGAGTTACCAATAAAGG+TGG | + | chr7.3:20343852-20343871 | None:intergenic | 40.0% | |
| TACTGCTATGTTTAGGAGGA+AGG | - | chr7.3:20343910-20343929 | MS.gene58838:CDS | 40.0% | |
| TGAGTTACCAATAAAGGTGG+AGG | + | chr7.3:20343849-20343868 | None:intergenic | 40.0% | |
| TGCATCATGTCATGTGACTA+TGG | - | chr7.3:20343173-20343192 | MS.gene58838:intron | 40.0% | |
| TGGTAACTCAACCTCAATTC+AGG | - | chr7.3:20343859-20343878 | MS.gene58838:CDS | 40.0% | |
| ! | ACCAGATCGGTTCAAAATTC+TGG | - | chr7.3:20341898-20341917 | MS.gene58838:CDS | 40.0% |
| ! | CCAGATCGGTTCAAAATTCT+GGG | - | chr7.3:20341899-20341918 | MS.gene58838:CDS | 40.0% |
| ! | GTTTCAGGTGTGTCATTCAT+TGG | - | chr7.3:20342342-20342361 | MS.gene58838:CDS | 40.0% |
| AGCAGCACACATCATGTTCT+TGG | + | chr7.3:20343645-20343664 | None:intergenic | 45.0% | |
| AGGAGAATATGAGGACGAAG+AGG | - | chr7.3:20344054-20344073 | MS.gene58838:CDS | 45.0% | |
| ATGTTCAAGGAGGACAATGC+GGG | - | chr7.3:20341874-20341893 | MS.gene58838:CDS | 45.0% | |
| CATGTTCAAGGAGGACAATG+CGG | - | chr7.3:20341873-20341892 | MS.gene58838:CDS | 45.0% | |
| CATTTGCTCATCCACCTCTT+TGG | + | chr7.3:20343726-20343745 | None:intergenic | 45.0% | |
| CGAAGACGAAGTTATCAGGA+CGG | + | chr7.3:20342115-20342134 | None:intergenic | 45.0% | |
| CGTCCTGATAACTTCGTCTT+CGG | - | chr7.3:20342113-20342132 | MS.gene58838:CDS | 45.0% | |
| GTATCAGAAACCTTCGGTGA+AGG | + | chr7.3:20342460-20342479 | None:intergenic | 45.0% | |
| GTCAACTCAACTCTGATCTC+CGG | - | chr7.3:20343486-20343505 | MS.gene58838:CDS | 45.0% | |
| TAAGATGAGCACCAAAGAGG+TGG | - | chr7.3:20343712-20343731 | MS.gene58838:CDS | 45.0% | |
| TCATGGTTGCTGAGATCAAG+TGG | + | chr7.3:20343436-20343455 | None:intergenic | 45.0% | |
| TCATTCATTGGGAGGAGGAA+CGG | - | chr7.3:20342354-20342373 | MS.gene58838:CDS | 45.0% | |
| TCCTTTCGCCCAATTGTTAC+CGG | + | chr7.3:20342150-20342169 | None:intergenic | 45.0% | |
| TGACCGAAGACGAAGTTATC+AGG | + | chr7.3:20342119-20342138 | None:intergenic | 45.0% | |
| TGAGATTCACAGCCAGTTTC+CGG | + | chr7.3:20343508-20343527 | None:intergenic | 45.0% | |
| TGAGTTTCCGACGTATCTTC+CGG | + | chr7.3:20341958-20341977 | None:intergenic | 45.0% | |
| TGGCAAACAGCATCAACTAC+AGG | + | chr7.3:20343370-20343389 | None:intergenic | 45.0% | |
| TGGGATCCACTCAACAAAGT+AGG | + | chr7.3:20343774-20343793 | None:intergenic | 45.0% | |
| TTCTCCTTCTTCATCAGCAG+TGG | + | chr7.3:20344041-20344060 | None:intergenic | 45.0% | |
| TTGATCTCAGCAACCATGAG+TGG | - | chr7.3:20343437-20343456 | MS.gene58838:CDS | 45.0% | |
| ! | CCCAGAATTTTGAACCGATC+TGG | + | chr7.3:20341902-20341921 | None:intergenic | 45.0% |
| ! | GCTTTCTTGCATTGGTACAC+TGG | - | chr7.3:20343932-20343951 | MS.gene58838:CDS | 45.0% |
| ! | GTGTGATTGTTTGCTGCAGT+TGG | - | chr7.3:20343401-20343420 | MS.gene58838:CDS | 45.0% |
| ! | TTGCATTGGTACACTGGTGA+AGG | - | chr7.3:20343938-20343957 | MS.gene58838:CDS | 45.0% |
| !! | AGATCAGAGTTGAGTTGACC+AGG | + | chr7.3:20343485-20343504 | None:intergenic | 45.0% |
| !! | GATCAGAGTTGAGTTGACCA+GGG | + | chr7.3:20343484-20343503 | None:intergenic | 45.0% |
| !! | GTTCTGGAACAGTCAATGCA+CGG | + | chr7.3:20343601-20343620 | None:intergenic | 45.0% |
| AACTTCGTCTTCGGTCAGTC+CGG | - | chr7.3:20342122-20342141 | MS.gene58838:CDS | 50.0% | |
| ACAATGGACAGTGTTCGCAC+TGG | - | chr7.3:20342071-20342090 | MS.gene58838:CDS | 50.0% | |
| ACAGCAAGTCACTCCACTCA+TGG | + | chr7.3:20343453-20343472 | None:intergenic | 50.0% | |
| ACCAATAAAGGTGGAGGCCA+TGG | + | chr7.3:20343843-20343862 | None:intergenic | 50.0% | |
| ACTGCTTCTGCCATGTTCAG+GGG | - | chr7.3:20343689-20343708 | MS.gene58838:intron | 50.0% | |
| AGAACTCACCCAGCAGATGT+GGG | - | chr7.3:20343616-20343635 | MS.gene58838:intron | 50.0% | |
| ATATGAGGACGAAGAGGACG+AGG | - | chr7.3:20344060-20344079 | MS.gene58838:CDS | 50.0% | |
| CAACTCTGATCTCCGGAAAC+TGG | - | chr7.3:20343493-20343512 | MS.gene58838:CDS | 50.0% | |
| CACTGCTTCTGCCATGTTCA+GGG | - | chr7.3:20343688-20343707 | MS.gene58838:intron | 50.0% | |
| CATTCATTGGGAGGAGGAAC+GGG | - | chr7.3:20342355-20342374 | MS.gene58838:CDS | 50.0% | |
| CGAACACTGTCCATTGTACC+AGG | + | chr7.3:20342068-20342087 | None:intergenic | 50.0% | |
| CGTCTGCACTTCTTCATGGT+CGG | - | chr7.3:20343539-20343558 | MS.gene58838:CDS | 50.0% | |
| CTTGGAATCCCACATCTGCT+GGG | + | chr7.3:20343627-20343646 | None:intergenic | 50.0% | |
| GATCCAACCGGAAGATACGT+CGG | - | chr7.3:20341948-20341967 | MS.gene58838:CDS | 50.0% | |
| GATGCCACTGCTGATGAAGA+AGG | - | chr7.3:20344034-20344053 | MS.gene58838:CDS | 50.0% | |
| GCTCATCTTACCCCTGAACA+TGG | + | chr7.3:20343702-20343721 | None:intergenic | 50.0% | |
| GGAGGAAGGCTTTCTTGCAT+TGG | - | chr7.3:20343924-20343943 | MS.gene58838:CDS | 50.0% | |
| GGGTAAGATGAGCACCAAAG+AGG | - | chr7.3:20343709-20343728 | MS.gene58838:intron | 50.0% | |
| GTTTGTGACATTGCTCCTCG+AGG | - | chr7.3:20343812-20343831 | MS.gene58838:CDS | 50.0% | |
| TACTACAACGAAGCCTCCTG+TGG | - | chr7.3:20342005-20342024 | MS.gene58838:CDS | 50.0% | |
| TCACTGCTTCTGCCATGTTC+AGG | - | chr7.3:20343687-20343706 | MS.gene58838:intron | 50.0% | |
| TCCATGGCCTCCACCTTTAT+TGG | - | chr7.3:20343839-20343858 | MS.gene58838:CDS | 50.0% | |
| TCTTGGAATCCCACATCTGC+TGG | + | chr7.3:20343628-20343647 | None:intergenic | 50.0% | |
| TGAACATGGCAGAAGCAGTG+AGG | + | chr7.3:20343688-20343707 | None:intergenic | 50.0% | |
| TGGAACAAACCTTCCACAGG+AGG | + | chr7.3:20342021-20342040 | None:intergenic | 50.0% | |
| TTGGTACACTGGTGAAGGCA+TGG | - | chr7.3:20343943-20343962 | MS.gene58838:CDS | 50.0% | |
| TTTCCGACGTATCTTCCGGT+TGG | + | chr7.3:20341954-20341973 | None:intergenic | 50.0% | |
| ! | AAGAAGTGCAGACGAGGGAA+TGG | + | chr7.3:20343533-20343552 | None:intergenic | 50.0% |
| ! | ACCATGAAGAAGTGCAGACG+AGG | + | chr7.3:20343539-20343558 | None:intergenic | 50.0% |
| ! | AGAAGTGCAGACGAGGGAAT+GGG | + | chr7.3:20343532-20343551 | None:intergenic | 50.0% |
| ! | AGTGTTCGCACTGGTCCTTA+CGG | - | chr7.3:20342080-20342099 | MS.gene58838:CDS | 50.0% |
| ! | CAGGTGTGTCATTCATTGGG+AGG | - | chr7.3:20342346-20342365 | MS.gene58838:CDS | 50.0% |
| ! | CCATGAAGAAGTGCAGACGA+GGG | + | chr7.3:20343538-20343557 | None:intergenic | 50.0% |
| ! | GAAGTAGTTTGCGACGAGCA+CGG | - | chr7.3:20341921-20341940 | MS.gene58838:CDS | 50.0% |
| ! | GTGTGTCATTCATTGGGAGG+AGG | - | chr7.3:20342349-20342368 | MS.gene58838:CDS | 50.0% |
| ! | TGATGTGTGCTGCTGATCCT+AGG | - | chr7.3:20343651-20343670 | MS.gene58838:intron | 50.0% |
| ! | TGGTGAAGGCATGGATGAGA+TGG | - | chr7.3:20343952-20343971 | MS.gene58838:CDS | 50.0% |
| !! | ACTTGCTGTCTTCGTTTCCC+TGG | - | chr7.3:20343464-20343483 | MS.gene58838:CDS | 50.0% |
| !! | TTCGGTGTTTCCTTCACCGA+AGG | - | chr7.3:20342447-20342466 | MS.gene58838:CDS | 50.0% |
| ACAACGAAGCCTCCTGTGGA+AGG | - | chr7.3:20342009-20342028 | MS.gene58838:CDS | 55.0% | |
| ACGGTATTGCTGAGAGCCAC+GGG | + | chr7.3:20343582-20343601 | None:intergenic | 55.0% | |
| ACTGCTGGTACTCAGACACG+AGG | + | chr7.3:20344009-20344028 | None:intergenic | 55.0% | |
| AGGAGGAACGGGATCTGGAA+TGG | - | chr7.3:20342366-20342385 | MS.gene58838:CDS | 55.0% | |
| AGGCTCCAAGTCCATGAGGA+TGG | + | chr7.3:20342048-20342067 | None:intergenic | 55.0% | |
| ATCCTCATGGACTTGGAGCC+TGG | - | chr7.3:20342047-20342066 | MS.gene58838:CDS | 55.0% | |
| CACATCTGCTGGGTGAGTTC+TGG | + | chr7.3:20343617-20343636 | None:intergenic | 55.0% | |
| CACGGTATTGCTGAGAGCCA+CGG | + | chr7.3:20343583-20343602 | None:intergenic | 55.0% | |
| CAGAACTCACCCAGCAGATG+TGG | - | chr7.3:20343615-20343634 | MS.gene58838:intron | 55.0% | |
| CCCTCGTCTGCACTTCTTCA+TGG | - | chr7.3:20343535-20343554 | MS.gene58838:CDS | 55.0% | |
| CTTCATCAGCAGTGGCATCC+TGG | + | chr7.3:20344033-20344052 | None:intergenic | 55.0% | |
| GAGCACGGCATAGATCCAAC+CGG | - | chr7.3:20341936-20341955 | MS.gene58838:CDS | 55.0% | |
| GCCGGTAACAATTGGGCGAA+AGG | - | chr7.3:20342146-20342165 | MS.gene58838:CDS | 55.0% | |
| GCGTGGAACAAACCTTCCAC+AGG | + | chr7.3:20342024-20342043 | None:intergenic | 55.0% | |
| GGACAATGCGGGAACCAGAT+CGG | - | chr7.3:20341885-20341904 | MS.gene58838:CDS | 55.0% | |
| GGACGGAAGATCTGACCGTA+AGG | + | chr7.3:20342098-20342117 | None:intergenic | 55.0% | |
| GGACTTGGAGCCTGGTACAA+TGG | - | chr7.3:20342055-20342074 | MS.gene58838:CDS | 55.0% | |
| GTCTGAGTACCAGCAGTACC+AGG | - | chr7.3:20344012-20344031 | MS.gene58838:CDS | 55.0% | |
| TACCAGGCTCCAAGTCCATG+AGG | + | chr7.3:20342052-20342071 | None:intergenic | 55.0% | |
| TTTGCTCCTCTCACATCCCG+TGG | - | chr7.3:20343563-20343582 | MS.gene58838:CDS | 55.0% | |
| ! | GGAGGAACGGGATCTGGAAT+GGG | - | chr7.3:20342367-20342386 | MS.gene58838:CDS | 55.0% |
| ! | TGTGCTGCTGATCCTAGGCA+TGG | - | chr7.3:20343656-20343675 | MS.gene58838:intron | 55.0% |
| !! | AGTCCGGTGCCGGTAACAAT+TGG | - | chr7.3:20342138-20342157 | MS.gene58838:CDS | 55.0% |
| !! | GTCCGGTGCCGGTAACAATT+GGG | - | chr7.3:20342139-20342158 | MS.gene58838:CDS | 55.0% |
| AAGTCCATGAGGATGGCGCG+TGG | + | chr7.3:20342041-20342060 | None:intergenic | 60.0% | |
| ACGCGCCATCCTCATGGACT+TGG | - | chr7.3:20342040-20342059 | MS.gene58838:CDS | 60.0% | |
| CAGTGGCATCCTGGTACTGC+TGG | + | chr7.3:20344024-20344043 | None:intergenic | 60.0% | |
| CGCCCAATTGTTACCGGCAC+CGG | + | chr7.3:20342144-20342163 | None:intergenic | 60.0% | |
| GTGAGGTAGCGACCATGCCT+AGG | + | chr7.3:20343671-20343690 | None:intergenic | 60.0% | |
| TGAGAGCCACGGGATGTGAG+AGG | + | chr7.3:20343572-20343591 | None:intergenic | 60.0% | |
| TGCTCCTCGAGGTCTCTCCA+TGG | - | chr7.3:20343823-20343842 | MS.gene58838:CDS | 60.0% | |
| TGTTCCACGCGCCATCCTCA+TGG | - | chr7.3:20342034-20342053 | MS.gene58838:CDS | 60.0% | |
| TTGGGAGGAGGAACGGGATC+TGG | - | chr7.3:20342361-20342380 | MS.gene58838:CDS | 60.0% | |
| GAGGCCATGGAGAGACCTCG+AGG | + | chr7.3:20343830-20343849 | None:intergenic | 65.0% | |
| GTCTTCGGTCAGTCCGGTGC+CGG | - | chr7.3:20342128-20342147 | MS.gene58838:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 20341858 | 20344105 | 20341858 | ID=MS.gene58838 |
| chr7.3 | mRNA | 20341858 | 20344105 | 20341858 | ID=MS.gene58838.t1;Parent=MS.gene58838 |
| chr7.3 | exon | 20343712 | 20344105 | 20343712 | ID=MS.gene58838.t1.exon1;Parent=MS.gene58838.t1 |
| chr7.3 | CDS | 20343712 | 20344105 | 20343712 | ID=cds.MS.gene58838.t1;Parent=MS.gene58838.t1 |
| chr7.3 | exon | 20343353 | 20343622 | 20343353 | ID=MS.gene58838.t1.exon2;Parent=MS.gene58838.t1 |
| chr7.3 | CDS | 20343353 | 20343622 | 20343353 | ID=cds.MS.gene58838.t1;Parent=MS.gene58838.t1 |
| chr7.3 | exon | 20341858 | 20342543 | 20341858 | ID=MS.gene58838.t1.exon3;Parent=MS.gene58838.t1 |
| chr7.3 | CDS | 20341858 | 20342543 | 20341858 | ID=cds.MS.gene58838.t1;Parent=MS.gene58838.t1 |
| Gene Sequence |
| Protein sequence |
