Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057357.t1 | XP_003600808.1 | 98.1 | 212 | 4 | 0 | 1 | 212 | 101 | 312 | 2.00E-114 | 421.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057357.t1 | Q9LZN0 | 78.5 | 214 | 44 | 1 | 1 | 212 | 71 | 284 | 6.0e-96 | 351.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057357.t1 | A0A072V9B0 | 98.1 | 212 | 4 | 0 | 1 | 212 | 101 | 312 | 1.4e-114 | 421.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene057357 | 0.810081 | 1.38E-50 | -1.69E-46 |
| MS.gene056041 | MS.gene057357 | 0.802929 | 4.44E-49 | -1.69E-46 |
| MS.gene057357 | MS.gene057358 | 0.901012 | 4.12E-78 | -1.69E-46 |
| MS.gene057357 | MS.gene057359 | 0.87954 | 1.15E-69 | -1.69E-46 |
| MS.gene057357 | MS.gene061260 | 0.816883 | 4.40E-52 | -1.69E-46 |
| MS.gene057357 | MS.gene068548 | 0.806005 | 1.01E-49 | -1.69E-46 |
| MS.gene057357 | MS.gene071651 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene057357 | MS.gene21320 | 0.810602 | 1.06E-50 | -1.69E-46 |
| MS.gene057357 | MS.gene36485 | 0.800833 | 1.20E-48 | -1.69E-46 |
| MS.gene057357 | MS.gene57752 | 0.803427 | 3.50E-49 | -1.69E-46 |
| MS.gene057357 | MS.gene61977 | 0.809749 | 1.62E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 58 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAGTTCCTGAGTCATATT+TGG | 0.209473 | 3.1:-56866848 | MS.gene057357:CDS |
| GTTTCGGAGCTACAGAATTT+TGG | 0.235434 | 3.1:-56867089 | MS.gene057357:CDS |
| CAGCATTGCTTTGGCTGAAA+TGG | 0.280188 | 3.1:-56866869 | MS.gene057357:CDS |
| TTCTGCAGGTAATGACTTGC+AGG | 0.301595 | 3.1:-56867296 | MS.gene057357:intron |
| TTGTTGAATTAATACCTTCT+TGG | 0.307496 | 3.1:-56867437 | MS.gene057357:CDS |
| GAACATGTAGCTACTGCATT+TGG | 0.324852 | 3.1:-56867549 | MS.gene057357:intron |
| GCTTCGGGAACACGGGGAAC+GGG | 0.327886 | 3.1:+56866976 | None:intergenic |
| CTTCTCACTGAGACCTGCTT+CGG | 0.374692 | 3.1:+56866960 | None:intergenic |
| CTACTGCATTTGGGCAACTT+TGG | 0.383497 | 3.1:-56867539 | MS.gene057357:CDS |
| AAAAGGGGTTTGCACTGCTT+TGG | 0.392592 | 3.1:-56868338 | MS.gene057357:CDS |
| ACCTCAAGTTTCTTTCCATC+AGG | 0.394767 | 3.1:+56867405 | None:intergenic |
| GGTGAAGATATGTCAGGTTC+AGG | 0.410078 | 3.1:-56868361 | MS.gene057357:CDS |
| TTCTCACTGAGACCTGCTTC+GGG | 0.416408 | 3.1:+56866961 | None:intergenic |
| GTCTATCAACAGCATTGCTT+TGG | 0.420189 | 3.1:-56866878 | MS.gene057357:CDS |
| CAGGAAATATTAGACAGTTT+CGG | 0.426447 | 3.1:-56867105 | MS.gene057357:CDS |
| TATGTTAGAAGTGAGACCTT+GGG | 0.431025 | 3.1:+56866817 | None:intergenic |
| GTTCCCCGTGTTCCCGAAGC+AGG | 0.436453 | 3.1:-56866973 | MS.gene057357:CDS |
| AACATGTAGCTACTGCATTT+GGG | 0.437715 | 3.1:-56867548 | MS.gene057357:intron |
| AATGCCATTACTAATCTTTG+TGG | 0.444234 | 3.1:-56868307 | MS.gene057357:intron |
| TGCTTCGGGAACACGGGGAA+CGG | 0.446615 | 3.1:+56866975 | None:intergenic |
| TTATCGAGTTTGCGAAGGGC+TGG | 0.449399 | 3.1:+56867246 | None:intergenic |
| GATATGTCAGGTTCAGGAAA+AGG | 0.450921 | 3.1:-56868355 | MS.gene057357:CDS |
| TCTTTCTTCTCACAAGGTAG+TGG | 0.451314 | 3.1:+56867507 | None:intergenic |
| AGCCGCTGATTCAGAAGGTT+CGG | 0.452812 | 3.1:-56867046 | MS.gene057357:CDS |
| TCAGGAAATGTTTGCCAAGA+AGG | 0.453625 | 3.1:+56867423 | None:intergenic |
| ATATGTCAGGTTCAGGAAAA+GGG | 0.474996 | 3.1:-56868354 | MS.gene057357:CDS |
| GTTGATGCAAATATCTGTCC+TGG | 0.487154 | 3.1:+56867272 | None:intergenic |
| AGAAATGTGGCAAAGAGAGA+TGG | 0.490084 | 3.1:-56867487 | MS.gene057357:CDS |
| TCTTGGCAAACATTTCCTGA+TGG | 0.512838 | 3.1:-56867420 | MS.gene057357:CDS |
| CTGAATTGACTTGCGAAAAG+AGG | 0.513814 | 3.1:+56867023 | None:intergenic |
| CTTCGGGAACACGGGGAACG+GGG | 0.523029 | 3.1:+56866977 | None:intergenic |
| CACATTTCTTTCTTCTCACA+AGG | 0.525180 | 3.1:+56867501 | None:intergenic |
| GAGACCTGCTTCGGGAACAC+GGG | 0.529025 | 3.1:+56866969 | None:intergenic |
| AGATTTGCAAAATTGTTGCT+AGG | 0.530179 | 3.1:-56868382 | MS.gene057357:CDS |
| TTGCTAGGTGAAGATATGTC+AGG | 0.530876 | 3.1:-56868367 | MS.gene057357:CDS |
| TGAGACCTGCTTCGGGAACA+CGG | 0.534669 | 3.1:+56866968 | None:intergenic |
| TTATGTTAGAAGTGAGACCT+TGG | 0.535933 | 3.1:+56866816 | None:intergenic |
| CGAGTTTGCGAAGGGCTGGA+AGG | 0.544385 | 3.1:+56867250 | None:intergenic |
| AGGTAATGACTTGCAGGCCC+AGG | 0.549183 | 3.1:-56867290 | MS.gene057357:CDS |
| CATACCACAAAGATTAGTAA+TGG | 0.555497 | 3.1:+56868303 | None:intergenic |
| AACAGATGTTGATATGATGA+AGG | 0.579015 | 3.1:-56868407 | None:intergenic |
| GCATGTTATCGAGTTTGCGA+AGG | 0.584286 | 3.1:+56867241 | None:intergenic |
| ATTGTAGCCGCTGATTCAGA+AGG | 0.591209 | 3.1:-56867051 | MS.gene057357:CDS |
| CATGTTATCGAGTTTGCGAA+GGG | 0.595448 | 3.1:+56867242 | None:intergenic |
| TATGTCAGGTTCAGGAAAAG+GGG | 0.595512 | 3.1:-56868353 | MS.gene057357:CDS |
| TAGAAGTGAGACCTTGGGGA+GGG | 0.597116 | 3.1:+56866822 | None:intergenic |
| TTGATGCAAATATCTGTCCT+GGG | 0.598206 | 3.1:+56867273 | None:intergenic |
| ATGTTAGAAGTGAGACCTTG+GGG | 0.598366 | 3.1:+56866818 | None:intergenic |
| TGTGGCAAAGAGAGATGGAA+TGG | 0.599356 | 3.1:-56867482 | MS.gene057357:CDS |
| AGGGTTTCCAAATATGACTC+AGG | 0.603777 | 3.1:+56866841 | None:intergenic |
| AGCGGCAAGAAGAGAAGTGG+TGG | 0.627026 | 3.1:-56867002 | MS.gene057357:CDS |
| TTCAGCGGCAAGAAGAGAAG+TGG | 0.628274 | 3.1:-56867005 | MS.gene057357:CDS |
| TCCTGATGGAAAGAAACTTG+AGG | 0.634337 | 3.1:-56867406 | MS.gene057357:intron |
| AGACCTGCTTCGGGAACACG+GGG | 0.636721 | 3.1:+56866970 | None:intergenic |
| ATATTTGGAAACCCTCCCCA+AGG | 0.663884 | 3.1:-56866833 | MS.gene057357:CDS |
| CTTGTGAGAAGAAAGAAATG+TGG | 0.666461 | 3.1:-56867500 | MS.gene057357:CDS |
| GGCCGAACCTTCTGAATCAG+CGG | 0.670869 | 3.1:+56867044 | None:intergenic |
| TTAGAAGTGAGACCTTGGGG+AGG | 0.695345 | 3.1:+56866821 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAAAATGTAAATTAAT+TGG | + | chr3.1:56868089-56868108 | None:intergenic | 10.0% |
| !! | ATCATAATAATTCACATATA+TGG | + | chr3.1:56867879-56867898 | None:intergenic | 15.0% |
| !! | AAAATTTGTCAACTACAATA+TGG | + | chr3.1:56866956-56866975 | None:intergenic | 20.0% |
| !! | TGTTATTAATTCCAAAAGAA+TGG | + | chr3.1:56867271-56867290 | None:intergenic | 20.0% |
| !! | TGTTATTAATTTCAAAAGGA+TGG | - | chr3.1:56867445-56867464 | MS.gene057357:CDS | 20.0% |
| !!! | AATATCTATTTGAGTTGATT+AGG | - | chr3.1:56867108-56867127 | MS.gene057357:intron | 20.0% |
| !!! | ATGGTGTTATTAATTTCAAA+AGG | - | chr3.1:56867441-56867460 | MS.gene057357:CDS | 20.0% |
| !!! | TAAAATTGATTTTGACATGT+TGG | - | chr3.1:56867083-56867102 | MS.gene057357:CDS | 20.0% |
| !!! | TAATTATGTGTTTCTTTTCA+TGG | - | chr3.1:56867030-56867049 | MS.gene057357:CDS | 20.0% |
| !!! | TGATTATGATGTTTCTAATA+TGG | - | chr3.1:56867895-56867914 | MS.gene057357:intron | 20.0% |
| !!! | TTTACATTTTCTTTTAACAC+AGG | - | chr3.1:56868094-56868113 | MS.gene057357:intron | 20.0% |
| ! | AAAGAAACTTGAGGTAAATT+TGG | - | chr3.1:56867821-56867840 | MS.gene057357:intron | 25.0% |
| ! | CATACAACTTATTGTTTGTT+TGG | + | chr3.1:56867622-56867641 | None:intergenic | 25.0% |
| ! | TTGTAAAAGAGAGTTCAATT+TGG | + | chr3.1:56867561-56867580 | None:intergenic | 25.0% |
| ! | TTGTTGAATTAATACCTTCT+TGG | - | chr3.1:56867781-56867800 | MS.gene057357:intron | 25.0% |
| !! | GTAGTTGACAAATTTTCTTT+TGG | - | chr3.1:56866960-56866979 | MS.gene057357:CDS | 25.0% |
| !!! | CTAACACTCTTTTTTTTGAT+TGG | - | chr3.1:56867294-56867313 | MS.gene057357:intron | 25.0% |
| !!! | TTCTTTTGGTTTGTTTAAGT+TGG | - | chr3.1:56866974-56866993 | MS.gene057357:CDS | 25.0% |
| AAAGAGAGTTCAATTTGGAA+TGG | + | chr3.1:56867556-56867575 | None:intergenic | 30.0% | |
| AATGCCATTACTAATCTTTG+TGG | - | chr3.1:56866911-56866930 | MS.gene057357:CDS | 30.0% | |
| AGATTTGCAAAATTGTTGCT+AGG | - | chr3.1:56866836-56866855 | MS.gene057357:CDS | 30.0% | |
| ATTCCAAAAGAATGGTAGTT+TGG | + | chr3.1:56867263-56867282 | None:intergenic | 30.0% | |
| ATTTCAAAAGGATGGTAGTT+TGG | - | chr3.1:56867453-56867472 | MS.gene057357:CDS | 30.0% | |
| CAGGAAATATTAGACAGTTT+CGG | - | chr3.1:56868113-56868132 | MS.gene057357:intron | 30.0% | |
| CATACCACAAAGATTAGTAA+TGG | + | chr3.1:56866918-56866937 | None:intergenic | 30.0% | |
| CTAAGTGTTAAAAACACGTT+TGG | + | chr3.1:56867182-56867201 | None:intergenic | 30.0% | |
| ! | ATGTGTTTCTTTTCATGGTA+AGG | - | chr3.1:56867035-56867054 | MS.gene057357:CDS | 30.0% |
| ! | TATCGAATCTTGTTCTTTTG+CGG | - | chr3.1:56868010-56868029 | MS.gene057357:intron | 30.0% |
| ! | TTCATGTAAAAGTGAGTTGA+AGG | + | chr3.1:56867517-56867536 | None:intergenic | 30.0% |
| !! | GAATTTTGGTATGTTGATCA+AGG | - | chr3.1:56868143-56868162 | MS.gene057357:intron | 30.0% |
| AACATGTAGCTACTGCATTT+GGG | - | chr3.1:56867670-56867689 | MS.gene057357:intron | 35.0% | |
| ATACCAATACCATCATGTCT+AGG | - | chr3.1:56867349-56867368 | MS.gene057357:intron | 35.0% | |
| ATATGTCAGGTTCAGGAAAA+GGG | - | chr3.1:56866864-56866883 | MS.gene057357:CDS | 35.0% | |
| ATGGTGATAGTTTCAGCATT+GGG | + | chr3.1:56867860-56867879 | None:intergenic | 35.0% | |
| CAAAAAAAGAGTGGTGGTAA+TGG | - | chr3.1:56867422-56867441 | MS.gene057357:CDS | 35.0% | |
| CACATTTCTTTCTTCTCACA+AGG | + | chr3.1:56867720-56867739 | None:intergenic | 35.0% | |
| CTTGTGAGAAGAAAGAAATG+TGG | - | chr3.1:56867718-56867737 | MS.gene057357:intron | 35.0% | |
| GCTACAGTCATAAAAAAGCT+GGG | + | chr3.1:56867220-56867239 | None:intergenic | 35.0% | |
| GTGTCCAATCAAAAAAAGAG+TGG | - | chr3.1:56867413-56867432 | MS.gene057357:CDS | 35.0% | |
| TATGGTGATAGTTTCAGCAT+TGG | + | chr3.1:56867861-56867880 | None:intergenic | 35.0% | |
| TATGTTAGAAGTGAGACCTT+GGG | + | chr3.1:56868404-56868423 | None:intergenic | 35.0% | |
| TCCAATCAAAAAAAGAGTGG+TGG | - | chr3.1:56867416-56867435 | MS.gene057357:CDS | 35.0% | |
| TCTAATATGGTTCATTCTGC+AGG | - | chr3.1:56867908-56867927 | MS.gene057357:intron | 35.0% | |
| TGCTACAGTCATAAAAAAGC+TGG | + | chr3.1:56867221-56867240 | None:intergenic | 35.0% | |
| TTATGTTAGAAGTGAGACCT+TGG | + | chr3.1:56868405-56868424 | None:intergenic | 35.0% | |
| TTGATGCAAATATCTGTCCT+GGG | + | chr3.1:56867948-56867967 | None:intergenic | 35.0% | |
| ! | GTACCAAACTACCATTCTTT+TGG | - | chr3.1:56867257-56867276 | MS.gene057357:CDS | 35.0% |
| !! | TGGTTTGTTTAAGTTGGCAA+AGG | - | chr3.1:56866980-56866999 | MS.gene057357:CDS | 35.0% |
| !!! | ACCACCACTCTTTTTTTGAT+TGG | + | chr3.1:56867420-56867439 | None:intergenic | 35.0% |
| ACCTCAAGTTTCTTTCCATC+AGG | + | chr3.1:56867816-56867835 | None:intergenic | 40.0% | |
| AGAAATGTGGCAAAGAGAGA+TGG | - | chr3.1:56867731-56867750 | MS.gene057357:intron | 40.0% | |
| AGGGTTTCCAAATATGACTC+AGG | + | chr3.1:56868380-56868399 | None:intergenic | 40.0% | |
| ATGTTAGAAGTGAGACCTTG+GGG | + | chr3.1:56868403-56868422 | None:intergenic | 40.0% | |
| CAATACCATCATGTCTAGGA+TGG | - | chr3.1:56867353-56867372 | MS.gene057357:intron | 40.0% | |
| CAATACCATCCTAGACATGA+TGG | + | chr3.1:56867361-56867380 | None:intergenic | 40.0% | |
| CATCCTAGACATGATGGTAT+TGG | + | chr3.1:56867355-56867374 | None:intergenic | 40.0% | |
| CATGTTATCGAGTTTGCGAA+GGG | + | chr3.1:56867979-56867998 | None:intergenic | 40.0% | |
| GAACATGTAGCTACTGCATT+TGG | - | chr3.1:56867669-56867688 | MS.gene057357:intron | 40.0% | |
| GATATGTCAGGTTCAGGAAA+AGG | - | chr3.1:56866863-56866882 | MS.gene057357:CDS | 40.0% | |
| GGAAGTTCCTGAGTCATATT+TGG | - | chr3.1:56868370-56868389 | MS.gene057357:CDS | 40.0% | |
| GTCTATCAACAGCATTGCTT+TGG | - | chr3.1:56868340-56868359 | MS.gene057357:CDS | 40.0% | |
| GTTGATGCAAATATCTGTCC+TGG | + | chr3.1:56867949-56867968 | None:intergenic | 40.0% | |
| TATGTCAGGTTCAGGAAAAG+GGG | - | chr3.1:56866865-56866884 | MS.gene057357:CDS | 40.0% | |
| TCAGGAAATGTTTGCCAAGA+AGG | + | chr3.1:56867798-56867817 | None:intergenic | 40.0% | |
| TCCACTAGTATTGTGACATG+TGG | - | chr3.1:56867325-56867344 | MS.gene057357:intron | 40.0% | |
| TCCTGATGGAAAGAAACTTG+AGG | - | chr3.1:56867812-56867831 | MS.gene057357:intron | 40.0% | |
| TCTTGGCAAACATTTCCTGA+TGG | - | chr3.1:56867798-56867817 | MS.gene057357:intron | 40.0% | |
| TCTTTCTTCTCACAAGGTAG+TGG | + | chr3.1:56867714-56867733 | None:intergenic | 40.0% | |
| TTGCTAGGTGAAGATATGTC+AGG | - | chr3.1:56866851-56866870 | MS.gene057357:CDS | 40.0% | |
| ! | CATCATGTCTAGGATGGTAT+TGG | - | chr3.1:56867359-56867378 | MS.gene057357:intron | 40.0% |
| ! | CTTTTCGCAAGTCAATTCAG+CGG | - | chr3.1:56868198-56868217 | MS.gene057357:intron | 40.0% |
| ! | GTTTCGGAGCTACAGAATTT+TGG | - | chr3.1:56868129-56868148 | MS.gene057357:intron | 40.0% |
| !! | CTGAATTGACTTGCGAAAAG+AGG | + | chr3.1:56868198-56868217 | None:intergenic | 40.0% |
| AAAAGGGGTTTGCACTGCTT+TGG | - | chr3.1:56866880-56866899 | MS.gene057357:CDS | 45.0% | |
| ATATTTGGAAACCCTCCCCA+AGG | - | chr3.1:56868385-56868404 | MS.gene057357:CDS | 45.0% | |
| CAGCATTGCTTTGGCTGAAA+TGG | - | chr3.1:56868349-56868368 | MS.gene057357:CDS | 45.0% | |
| CTACTGCATTTGGGCAACTT+TGG | - | chr3.1:56867679-56867698 | MS.gene057357:intron | 45.0% | |
| GCATGTTATCGAGTTTGCGA+AGG | + | chr3.1:56867980-56867999 | None:intergenic | 45.0% | |
| GCCACATGTCACAATACTAG+TGG | + | chr3.1:56867329-56867348 | None:intergenic | 45.0% | |
| GGCATGTGTCTCGATACTAT+TGG | - | chr3.1:56867385-56867404 | MS.gene057357:intron | 45.0% | |
| GGTGAAGATATGTCAGGTTC+AGG | - | chr3.1:56866857-56866876 | MS.gene057357:CDS | 45.0% | |
| TGTGGCAAAGAGAGATGGAA+TGG | - | chr3.1:56867736-56867755 | MS.gene057357:intron | 45.0% | |
| ! | TTCTGCAGGTAATGACTTGC+AGG | - | chr3.1:56867922-56867941 | MS.gene057357:intron | 45.0% |
| !! | ATTGTAGCCGCTGATTCAGA+AGG | - | chr3.1:56868167-56868186 | MS.gene057357:intron | 45.0% |
| !! | GGCACACTAGTAGTTCTAGT+CGG | - | chr3.1:56868031-56868050 | MS.gene057357:intron | 45.0% |
| !! | TGTCTAGGATGGTATTGGTG+TGG | - | chr3.1:56867364-56867383 | MS.gene057357:intron | 45.0% |
| CTTCTCACTGAGACCTGCTT+CGG | + | chr3.1:56868261-56868280 | None:intergenic | 50.0% | |
| TAGAAGTGAGACCTTGGGGA+GGG | + | chr3.1:56868399-56868418 | None:intergenic | 50.0% | |
| TTAGAAGTGAGACCTTGGGG+AGG | + | chr3.1:56868400-56868419 | None:intergenic | 50.0% | |
| TTATCGAGTTTGCGAAGGGC+TGG | + | chr3.1:56867975-56867994 | None:intergenic | 50.0% | |
| TTCAGCGGCAAGAAGAGAAG+TGG | - | chr3.1:56868213-56868232 | MS.gene057357:intron | 50.0% | |
| TTCTCACTGAGACCTGCTTC+GGG | + | chr3.1:56868260-56868279 | None:intergenic | 50.0% | |
| !! | AGCCGCTGATTCAGAAGGTT+CGG | - | chr3.1:56868172-56868191 | MS.gene057357:intron | 50.0% |
| AGCGGCAAGAAGAGAAGTGG+TGG | - | chr3.1:56868216-56868235 | MS.gene057357:intron | 55.0% | |
| GGCCGAACCTTCTGAATCAG+CGG | + | chr3.1:56868177-56868196 | None:intergenic | 55.0% | |
| TGAGACCTGCTTCGGGAACA+CGG | + | chr3.1:56868253-56868272 | None:intergenic | 55.0% | |
| ! | AGGTAATGACTTGCAGGCCC+AGG | - | chr3.1:56867928-56867947 | MS.gene057357:intron | 55.0% |
| AGACCTGCTTCGGGAACACG+GGG | + | chr3.1:56868251-56868270 | None:intergenic | 60.0% | |
| CGAGTTTGCGAAGGGCTGGA+AGG | + | chr3.1:56867971-56867990 | None:intergenic | 60.0% | |
| GAGACCTGCTTCGGGAACAC+GGG | + | chr3.1:56868252-56868271 | None:intergenic | 60.0% | |
| TGCTTCGGGAACACGGGGAA+CGG | + | chr3.1:56868246-56868265 | None:intergenic | 60.0% | |
| CTTCGGGAACACGGGGAACG+GGG | + | chr3.1:56868244-56868263 | None:intergenic | 65.0% | |
| GCTTCGGGAACACGGGGAAC+GGG | + | chr3.1:56868245-56868264 | None:intergenic | 65.0% | |
| GTTCCCCGTGTTCCCGAAGC+AGG | - | chr3.1:56868245-56868264 | MS.gene057357:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 56866816 | 56868424 | 56866816 | ID=MS.gene057357 |
| chr3.1 | mRNA | 56866816 | 56868424 | 56866816 | ID=MS.gene057357.t1;Parent=MS.gene057357 |
| chr3.1 | exon | 56868308 | 56868424 | 56868308 | ID=MS.gene057357.t1.exon1;Parent=MS.gene057357.t1 |
| chr3.1 | CDS | 56868308 | 56868424 | 56868308 | ID=cds.MS.gene057357.t1;Parent=MS.gene057357.t1 |
| chr3.1 | exon | 56867407 | 56867561 | 56867407 | ID=MS.gene057357.t1.exon2;Parent=MS.gene057357.t1 |
| chr3.1 | CDS | 56867407 | 56867561 | 56867407 | ID=cds.MS.gene057357.t1;Parent=MS.gene057357.t1 |
| chr3.1 | exon | 56867236 | 56867310 | 56867236 | ID=MS.gene057357.t1.exon3;Parent=MS.gene057357.t1 |
| chr3.1 | CDS | 56867236 | 56867310 | 56867236 | ID=cds.MS.gene057357.t1;Parent=MS.gene057357.t1 |
| chr3.1 | exon | 56866816 | 56867124 | 56866816 | ID=MS.gene057357.t1.exon4;Parent=MS.gene057357.t1 |
| chr3.1 | CDS | 56866816 | 56867124 | 56866816 | ID=cds.MS.gene057357.t1;Parent=MS.gene057357.t1 |
| Gene Sequence |
| Protein sequence |
