Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071651.t1 | XP_013468304.1 | 89.8 | 984 | 39 | 6 | 8 | 932 | 1 | 982 | 0.00E+00 | 1629 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071651.t1 | Q0WQJ7 | 55.4 | 982 | 369 | 10 | 10 | 931 | 2 | 974 | 3.0e-277 | 956.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071651.t1 | A0A072VL62 | 89.8 | 984 | 39 | 6 | 8 | 932 | 1 | 982 | 0.0e+00 | 1629.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene071651 | 0.855842 | 4.81E-62 | -1.69E-46 |
| MS.gene049596 | MS.gene071651 | 0.808105 | 3.65E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene071651 | 0.902505 | 9.05E-79 | -1.69E-46 |
| MS.gene050297 | MS.gene071651 | 0.896002 | 5.60E-76 | -1.69E-46 |
| MS.gene050310 | MS.gene071651 | 0.803239 | 3.83E-49 | -1.69E-46 |
| MS.gene050648 | MS.gene071651 | 0.825161 | 5.45E-54 | -1.69E-46 |
| MS.gene051094 | MS.gene071651 | 0.854615 | 1.09E-61 | -1.69E-46 |
| MS.gene051629 | MS.gene071651 | 0.848773 | 4.95E-60 | -1.69E-46 |
| MS.gene051742 | MS.gene071651 | 0.800976 | 1.12E-48 | -1.69E-46 |
| MS.gene051955 | MS.gene071651 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene071651 | 0.854661 | 1.06E-61 | -1.69E-46 |
| MS.gene053173 | MS.gene071651 | 0.80766 | 4.53E-50 | -1.69E-46 |
| MS.gene053348 | MS.gene071651 | 0.824613 | 7.34E-54 | -1.69E-46 |
| MS.gene053416 | MS.gene071651 | 0.850983 | 1.19E-60 | -1.69E-46 |
| MS.gene053417 | MS.gene071651 | 0.848554 | 5.69E-60 | -1.69E-46 |
| MS.gene05369 | MS.gene071651 | 0.838813 | 2.30E-57 | -1.69E-46 |
| MS.gene054551 | MS.gene071651 | 0.81175 | 5.99E-51 | -1.69E-46 |
| MS.gene054643 | MS.gene071651 | 0.805035 | 1.62E-49 | -1.69E-46 |
| MS.gene055308 | MS.gene071651 | 0.807793 | 4.25E-50 | -1.69E-46 |
| MS.gene055411 | MS.gene071651 | 0.853304 | 2.61E-61 | -1.69E-46 |
| MS.gene055578 | MS.gene071651 | 0.807675 | 4.50E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene071651 | 0.853055 | 3.08E-61 | -1.69E-46 |
| MS.gene056041 | MS.gene071651 | 0.874649 | 5.72E-68 | -1.69E-46 |
| MS.gene056042 | MS.gene071651 | 0.829731 | 4.37E-55 | -1.69E-46 |
| MS.gene056526 | MS.gene071651 | 0.845209 | 4.68E-59 | -1.69E-46 |
| MS.gene057004 | MS.gene071651 | 0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene057357 | MS.gene071651 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene057483 | MS.gene071651 | 0.802297 | 6.00E-49 | -1.69E-46 |
| MS.gene058196 | MS.gene071651 | 0.881903 | 1.63E-70 | -1.69E-46 |
| MS.gene058197 | MS.gene071651 | 0.883286 | 5.10E-71 | -1.69E-46 |
| MS.gene058198 | MS.gene071651 | 0.8835 | 4.26E-71 | -1.69E-46 |
| MS.gene058818 | MS.gene071651 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene059300 | MS.gene071651 | 0.909484 | 5.42E-82 | -1.69E-46 |
| MS.gene059553 | MS.gene071651 | 0.802166 | 6.38E-49 | -1.69E-46 |
| MS.gene060473 | MS.gene071651 | 0.879113 | 1.62E-69 | -1.69E-46 |
| MS.gene060565 | MS.gene071651 | 0.873504 | 1.40E-67 | -1.69E-46 |
| MS.gene06057 | MS.gene071651 | 0.877573 | 5.64E-69 | -1.69E-46 |
| MS.gene06093 | MS.gene071651 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene061099 | MS.gene071651 | 0.838 | 3.73E-57 | -1.69E-46 |
| MS.gene061260 | MS.gene071651 | 0.870417 | 1.48E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 161 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTGTTCTTCATCGCTTAA+TGG | 0.149663 | 1.1:-49855210 | None:intergenic |
| AAAATATTTGTTTCACAAAT+TGG | 0.194436 | 1.1:-49860127 | None:intergenic |
| AACTGCACTGTCTTTGCTTA+TGG | 0.203169 | 1.1:+49855516 | MS.gene071651:CDS |
| ATGTATTTGCTAGCTCCTTC+AGG | 0.233318 | 1.1:-49859125 | None:intergenic |
| TGTCGTGTAATGAAAATAAA+AGG | 0.235844 | 1.1:+49855253 | MS.gene071651:CDS |
| GGCACTTTCCCACTGCTTCC+TGG | 0.257257 | 1.1:-49860579 | None:intergenic |
| GATTTGCATACAACCATTAT+AGG | 0.274995 | 1.1:+49858868 | MS.gene071651:CDS |
| CAAGCTTAATCTTGTTGATT+TGG | 0.283009 | 1.1:+49856204 | MS.gene071651:CDS |
| AATTGCTGTAATTTGCTCTA+AGG | 0.284276 | 1.1:-49859853 | None:intergenic |
| ATTGATCTCTGTTGTGATTT+CGG | 0.296531 | 1.1:-49855444 | None:intergenic |
| CGTGAAAGCTTCATCTGATA+TGG | 0.301727 | 1.1:+49859152 | MS.gene071651:CDS |
| ATTCTGCGCATGTACCTTAC+AGG | 0.303011 | 1.1:+49857055 | MS.gene071651:CDS |
| TGAATCGGGACGACGGCGTT+CGG | 0.323394 | 1.1:-49855017 | None:intergenic |
| TCTTTGTTATCCTGACGGTT+AGG | 0.329799 | 1.1:-49855058 | None:intergenic |
| CCTACTTTCTTAGACTGATC+TGG | 0.346314 | 1.1:-49854947 | None:intergenic |
| GAAGAAACCTGTAGCCCTTA+TGG | 0.347923 | 1.1:+49855884 | MS.gene071651:CDS |
| AACTTTCTCTACTTGTTTGT+TGG | 0.348646 | 1.1:-49855301 | None:intergenic |
| TCATCTCAAAATTTGTCAAT+TGG | 0.354938 | 1.1:-49859713 | None:intergenic |
| CAATTTCCTTCTTGTTCTCA+TGG | 0.355135 | 1.1:-49860988 | None:intergenic |
| CAGTCTAAGAAAGTAGGGTT+AGG | 0.355683 | 1.1:+49854953 | MS.gene071651:CDS |
| CTTAATCTTGTTGATTTGGC+TGG | 0.358574 | 1.1:+49856208 | MS.gene071651:CDS |
| TTCTTCACTCTTTCTTCAAT+AGG | 0.359638 | 1.1:-49855867 | None:intergenic |
| TACATATTCATTAACTTCAT+TGG | 0.360766 | 1.1:-49860090 | None:intergenic |
| GAATCGGGACGACGGCGTTC+GGG | 0.361733 | 1.1:-49855016 | None:intergenic |
| GCAAGAACAGAAACTGGATT+TGG | 0.371508 | 1.1:+49858072 | MS.gene071651:CDS |
| TACTTCCTCTTGTTGTTGAA+TGG | 0.373061 | 1.1:-49859457 | None:intergenic |
| GGCCTGGTAGAACTGTCTTC+TGG | 0.373427 | 1.1:-49855846 | None:intergenic |
| CGAGAACTTCATTGACAATT+GGG | 0.374555 | 1.1:-49855485 | None:intergenic |
| TCGAGAACTTCATTGACAAT+TGG | 0.379235 | 1.1:-49855486 | None:intergenic |
| CAAATACAGTGGACTGTTCC+AGG | 0.380612 | 1.1:+49860561 | MS.gene071651:CDS |
| ATGACAGAAATTTATTCATC+AGG | 0.390094 | 1.1:+49859093 | MS.gene071651:CDS |
| AACAGAGCAAGAACAGAAAC+TGG | 0.390278 | 1.1:+49858066 | MS.gene071651:CDS |
| CTTTGTTATCCTGACGGTTA+GGG | 0.391090 | 1.1:-49855057 | None:intergenic |
| GGATTTGGAATGCGAGCTTA+AGG | 0.393290 | 1.1:+49858087 | MS.gene071651:CDS |
| CATCTTGACAAACCATGCTT+TGG | 0.394664 | 1.1:+49860766 | MS.gene071651:CDS |
| TGTGTCTGTGTCATTATCTA+TGG | 0.400091 | 1.1:+49860799 | MS.gene071651:CDS |
| CCATCTTCCATAAGGGCTAC+AGG | 0.404889 | 1.1:-49855891 | None:intergenic |
| CAGGGCCGTGCTAGAGAAGC+AGG | 0.406017 | 1.1:+49856977 | MS.gene071651:intron |
| CCGATCAGAGCCTCGTGAAT+CGG | 0.406849 | 1.1:-49855032 | None:intergenic |
| TTTGTTGAAGGACTTGTACT+TGG | 0.413766 | 1.1:+49857434 | MS.gene071651:CDS |
| TAGTCCGTCTGCTTATTGTT+TGG | 0.417215 | 1.1:+49857237 | MS.gene071651:CDS |
| TTTCAAAGGCTGTTTGTTGA+AGG | 0.427403 | 1.1:+49857422 | MS.gene071651:CDS |
| GGAAATTGTTGAAGGACAAC+TGG | 0.428679 | 1.1:-49860601 | None:intergenic |
| TCTCAAAATTTGTCAATTGG+TGG | 0.430630 | 1.1:-49859710 | None:intergenic |
| CACTCTTTCTTCAATAGGCC+TGG | 0.432300 | 1.1:-49855862 | None:intergenic |
| TTGGTGCAGTCGTTCACATT+CGG | 0.433157 | 1.1:+49856117 | MS.gene071651:intron |
| TTGCTCTACTAGCATAGTCT+AGG | 0.434387 | 1.1:-49857276 | None:intergenic |
| GTGCCTTGTTAATGATTACT+TGG | 0.435453 | 1.1:+49861102 | MS.gene071651:CDS |
| GAAATTTATTCATCAGGAGT+TGG | 0.440491 | 1.1:+49859099 | MS.gene071651:CDS |
| TGTATTTGCTAGCTCCTTCA+GGG | 0.441154 | 1.1:-49859124 | None:intergenic |
| AAATTTATTCATCAGGAGTT+GGG | 0.441797 | 1.1:+49859100 | MS.gene071651:CDS |
| TTCTGTGACGACACAATTGT+TGG | 0.445299 | 1.1:+49861012 | MS.gene071651:CDS |
| CGATCAGAGCCTCGTGAATC+GGG | 0.450247 | 1.1:-49855031 | None:intergenic |
| CAAGCATGGTGGAAATATAT+CGG | 0.453919 | 1.1:+49861057 | MS.gene071651:CDS |
| TTGAGAAATAGATCCTATAA+TGG | 0.454865 | 1.1:-49858881 | None:intergenic |
| AAACGAAAACTCACCAATCC+TGG | 0.458920 | 1.1:-49860187 | None:intergenic |
| TGACAATTGGGGAAATTGCT+TGG | 0.459148 | 1.1:-49855473 | None:intergenic |
| CTACTTTCTTAGACTGATCT+GGG | 0.463811 | 1.1:-49854946 | None:intergenic |
| GTCTTTGCTTATGGACAGAC+CGG | 0.467944 | 1.1:+49855525 | MS.gene071651:CDS |
| CCTGTAGCCCTTATGGAAGA+TGG | 0.471287 | 1.1:+49855891 | MS.gene071651:CDS |
| GTCGTGTAATGAAAATAAAA+GGG | 0.472693 | 1.1:+49855254 | MS.gene071651:CDS |
| GGACGACGGCGTTCGGGTCG+AGG | 0.473129 | 1.1:-49855010 | None:intergenic |
| TCATTACACGACACCACCTT+CGG | 0.475943 | 1.1:-49855243 | None:intergenic |
| AAAGGTAGTGTGTTGTTAAG+AGG | 0.477663 | 1.1:+49855915 | MS.gene071651:CDS |
| AAATGAAATCTATACTCTGT+TGG | 0.480457 | 1.1:+49855965 | MS.gene071651:CDS |
| TTCTTGCAGATCACAAAGAA+AGG | 0.483227 | 1.1:+49858782 | MS.gene071651:intron |
| ATACTTTCTGACTGAGGTTG+AGG | 0.484486 | 1.1:-49857926 | None:intergenic |
| CATGTTAATATGAACCTGTA+AGG | 0.486111 | 1.1:-49857069 | None:intergenic |
| CTTTATCTTTGTTATCCTGA+CGG | 0.486717 | 1.1:-49855063 | None:intergenic |
| AAAATTTGACGAACTGCTCT+CGG | 0.492168 | 1.1:-49855735 | None:intergenic |
| ACTTCCAGGTGCACTAATGA+TGG | 0.493393 | 1.1:+49860964 | MS.gene071651:intron |
| CATTGCTTAACAAGAGAAGC+AGG | 0.496816 | 1.1:+49856021 | MS.gene071651:CDS |
| GTTCTTGTGGAAATTGTTGA+AGG | 0.497381 | 1.1:-49860609 | None:intergenic |
| CCAGATCAGTCTAAGAAAGT+AGG | 0.498378 | 1.1:+49854947 | MS.gene071651:CDS |
| AAGAGGACTTGAAGAAGAAT+CGG | 0.500002 | 1.1:+49855932 | MS.gene071651:CDS |
| TAGAGGATTGTCTCCAGGAT+TGG | 0.501498 | 1.1:+49860174 | MS.gene071651:CDS |
| GGTGATTTAACTGCTGAGGC+TGG | 0.508047 | 1.1:+49855705 | MS.gene071651:CDS |
| TATGTGAAAGAAACAGTAAT+TGG | 0.508611 | 1.1:+49856157 | MS.gene071651:CDS |
| AACCATAAACAGGAAGAGGC+TGG | 0.509268 | 1.1:+49859813 | MS.gene071651:intron |
| AGGATATTACGAGATTCCTT+AGG | 0.510487 | 1.1:+49857181 | MS.gene071651:CDS |
| TCTCTGCAAGATTGTTCTTG+TGG | 0.514439 | 1.1:-49860622 | None:intergenic |
| AATTGTTGAAGAAACTCAAA+AGG | 0.514692 | 1.1:+49859680 | MS.gene071651:CDS |
| TCAGAGATAGTAAGCTTACA+AGG | 0.521004 | 1.1:+49857161 | MS.gene071651:intron |
| AGAGGCTGGAAGAGATGAGG+AGG | 0.521605 | 1.1:+49859827 | MS.gene071651:CDS |
| TTCTTTCACATAGACAGTAA+TGG | 0.521841 | 1.1:-49856146 | None:intergenic |
| AGTCTAAGAAAGTAGGGTTA+GGG | 0.523529 | 1.1:+49854954 | MS.gene071651:CDS |
| TGATCGGAACCCTAACCGTC+AGG | 0.523617 | 1.1:+49855048 | MS.gene071651:CDS |
| GATGCTGTCAATCACATCAT+TGG | 0.525717 | 1.1:-49859395 | None:intergenic |
| TCAGAAAATATACTACGTTC+CGG | 0.527487 | 1.1:+49856232 | MS.gene071651:CDS |
| ATATTACGAGATTCCTTAGG+AGG | 0.529688 | 1.1:+49857184 | MS.gene071651:CDS |
| GCGCATTTATCACACGTCCC+AGG | 0.530468 | 1.1:-49857023 | None:intergenic |
| GCCCTTATGGAAGATGGAAA+AGG | 0.531692 | 1.1:+49855897 | MS.gene071651:CDS |
| CAAGTGTGCAACAGTCTAAG+AGG | 0.531813 | 1.1:+49860021 | MS.gene071651:CDS |
| ATGGATGCTGATTATGATGC+AGG | 0.532675 | 1.1:+49860818 | MS.gene071651:CDS |
| TACAATAGAGGATTGTCTCC+AGG | 0.533289 | 1.1:+49860169 | MS.gene071651:CDS |
| CAGATCAGTCTAAGAAAGTA+GGG | 0.533619 | 1.1:+49854948 | MS.gene071651:CDS |
| TGCTCTACTAGCATAGTCTA+GGG | 0.537773 | 1.1:-49857275 | None:intergenic |
| CAGCTGTAAAGCTACAATAG+AGG | 0.540704 | 1.1:+49860157 | MS.gene071651:CDS |
| TGGCAGTGGTAACTGACCTC+AGG | 0.542599 | 1.1:-49857316 | None:intergenic |
| CTTATGGACAGACCGGGGAC+TGG | 0.549798 | 1.1:+49855532 | MS.gene071651:CDS |
| CAGCACATGCTCTGGAAGCA+AGG | 0.549984 | 1.1:+49859061 | MS.gene071651:CDS |
| TGCAGATCACAAAGAAAGGA+TGG | 0.550426 | 1.1:+49858786 | MS.gene071651:intron |
| CTCCAGAAGACAGTTCTACC+AGG | 0.551796 | 1.1:+49855844 | MS.gene071651:CDS |
| TGCAGATGTACGAGCAGCGA+GGG | 0.557824 | 1.1:+49857557 | MS.gene071651:intron |
| AGAAACAGTAATTGGTGATG+AGG | 0.558678 | 1.1:+49856165 | MS.gene071651:CDS |
| TTGTCAATGAAGTTCTCGAC+GGG | 0.559114 | 1.1:+49855490 | MS.gene071651:CDS |
| CGCATTTATCACACGTCCCA+GGG | 0.559660 | 1.1:-49857022 | None:intergenic |
| CAAAGAAGAAGCTGAAAAGA+AGG | 0.562709 | 1.1:+49857617 | MS.gene071651:CDS |
| AACAAGAGCTTACTCACCCT+GGG | 0.564453 | 1.1:+49857006 | MS.gene071651:CDS |
| ACAGAAACAACTTAAATGCA+TGG | 0.566060 | 1.1:+49858906 | MS.gene071651:CDS |
| TGCAGGAACACACAATCTGC+TGG | 0.572017 | 1.1:+49860835 | MS.gene071651:CDS |
| CATCTCCATTCAACAACAAG+AGG | 0.574191 | 1.1:+49859452 | MS.gene071651:CDS |
| GAAATTGAGAGAATGAAAGA+AGG | 0.574967 | 1.1:+49857456 | MS.gene071651:CDS |
| CCGATTCACGAGGCTCTGAT+CGG | 0.575179 | 1.1:+49855032 | MS.gene071651:CDS |
| AAGTATTATTTCAGCACGAG+TGG | 0.575288 | 1.1:+49859596 | MS.gene071651:CDS |
| AAACAAGAGCTTACTCACCC+TGG | 0.578635 | 1.1:+49857005 | MS.gene071651:CDS |
| TGGACTGTTCCAGGAAGCAG+TGG | 0.580005 | 1.1:+49860570 | MS.gene071651:CDS |
| AGAGGCGTCAAGGAATATGC+AGG | 0.581642 | 1.1:+49859995 | MS.gene071651:CDS |
| ACTACGTTCCGGAGCACGTG+AGG | 0.582073 | 1.1:+49856243 | MS.gene071651:CDS |
| TGCCTTGATTGAGCGTGCAA+AGG | 0.586125 | 1.1:+49858395 | MS.gene071651:intron |
| AACATCTAAGAGAACTGCTA+TGG | 0.588510 | 1.1:+49859887 | MS.gene071651:CDS |
| TTTACAGTTTCTTGCCACTG+TGG | 0.590640 | 1.1:+49859363 | MS.gene071651:intron |
| TTTAGGTCTCAGAGGCGTCA+AGG | 0.592242 | 1.1:+49859985 | MS.gene071651:intron |
| TTCAGCACGAGTGGTTTCAG+AGG | 0.594099 | 1.1:+49859605 | MS.gene071651:CDS |
| TTTGCTCATCAAGAGAATTG+TGG | 0.598391 | 1.1:-49859417 | None:intergenic |
| GCGTGCAAAGGAAATGTGTA+CGG | 0.606609 | 1.1:+49858407 | MS.gene071651:intron |
| ACGATCGAATGTTCCGAAGG+TGG | 0.607596 | 1.1:+49855230 | MS.gene071651:CDS |
| AGCCTCGTGAATCGGGACGA+CGG | 0.613226 | 1.1:-49855024 | None:intergenic |
| CGCCGTCGTCCCGATTCACG+AGG | 0.616893 | 1.1:+49855022 | MS.gene071651:CDS |
| ATGCGAGCTTAAGGATTGCA+AGG | 0.618764 | 1.1:+49858096 | MS.gene071651:CDS |
| CGAGCAGCGAGGGAAAAGAA+TGG | 0.620002 | 1.1:+49857567 | MS.gene071651:CDS |
| TATTACGAGATTCCTTAGGA+GGG | 0.621917 | 1.1:+49857185 | MS.gene071651:CDS |
| GATGGACCATGAGAACAAGA+AGG | 0.625243 | 1.1:+49860982 | MS.gene071651:CDS |
| TCTTTGCTTATGGACAGACC+GGG | 0.628463 | 1.1:+49855526 | MS.gene071651:CDS |
| GGAAGAGGCTGGAAGAGATG+AGG | 0.629449 | 1.1:+49859824 | MS.gene071651:intron |
| ATTGTCAATGAAGTTCTCGA+CGG | 0.631832 | 1.1:+49855489 | MS.gene071651:CDS |
| ACGTGTGATAAATGCGCTCG+TGG | 0.634469 | 1.1:+49857029 | MS.gene071651:CDS |
| TCTTCCAAACAATAAGCAGA+CGG | 0.637285 | 1.1:-49857241 | None:intergenic |
| ATCTATACTCTGTTGGAACG+AGG | 0.638922 | 1.1:+49855972 | MS.gene071651:CDS |
| ATCAGGAGTTGGGACCCTGA+AGG | 0.641988 | 1.1:+49859110 | MS.gene071651:CDS |
| CGGGGAATACTTTCTGACTG+AGG | 0.646451 | 1.1:-49857932 | None:intergenic |
| GGTGGGTGATTTAACTGCTG+AGG | 0.653361 | 1.1:+49855701 | MS.gene071651:CDS |
| GAGAACTTCATTGACAATTG+GGG | 0.654278 | 1.1:-49855484 | None:intergenic |
| AATCTGCTGGCAGATGTGAA+TGG | 0.657716 | 1.1:+49860848 | MS.gene071651:CDS |
| GCTCTGTTAAGTAGAGCTCA+CGG | 0.658800 | 1.1:-49858051 | None:intergenic |
| ACAACGATCGAATGTTCCGA+AGG | 0.660517 | 1.1:+49855227 | MS.gene071651:CDS |
| GATGAGGAGTTGATTAAGTG+TGG | 0.662029 | 1.1:+49856181 | MS.gene071651:CDS |
| AGTTCATTACAAGACAAGCA+TGG | 0.667182 | 1.1:+49861043 | MS.gene071651:CDS |
| GCAATGCAGTTCAAATACAG+TGG | 0.670530 | 1.1:+49860550 | MS.gene071651:intron |
| GAAATTGTTGAAGGACAACT+GGG | 0.671341 | 1.1:-49860600 | None:intergenic |
| AGGGCCGTGCTAGAGAAGCA+GGG | 0.674104 | 1.1:+49856978 | MS.gene071651:intron |
| GGACTGTTCCAGGAAGCAGT+GGG | 0.685626 | 1.1:+49860571 | MS.gene071651:CDS |
| CTTTGCTTATGGACAGACCG+GGG | 0.685701 | 1.1:+49855527 | MS.gene071651:CDS |
| ATACCAAGTAATCATTAACA+AGG | 0.690518 | 1.1:-49861105 | None:intergenic |
| AAATATAAAGAATAAGCCTG+AGG | 0.698802 | 1.1:+49857300 | MS.gene071651:CDS |
| ATGCAGATGTACGAGCAGCG+AGG | 0.713547 | 1.1:+49857556 | MS.gene071651:intron |
| AGATCACAAAGAAAGGATGG+AGG | 0.714530 | 1.1:+49858789 | MS.gene071651:intron |
| TGGAACGAGGAGCATCAAAG+AGG | 0.716495 | 1.1:+49855985 | MS.gene071651:CDS |
| TACTTTCTTAGACTGATCTG+GGG | 0.719246 | 1.1:-49854945 | None:intergenic |
| TCATTACAAGACAAGCATGG+TGG | 0.719565 | 1.1:+49861046 | MS.gene071651:CDS |
| ATTGGCTTCAAGAACCACAG+TGG | 0.777556 | 1.1:-49859377 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATATTTTGTTGTTAA+AGG | - | chr1.1:49860332-49860351 | None:intergenic | 10.0% |
| !!! | CTTTTTTAAATAAGAAATTA+TGG | - | chr1.1:49858148-49858167 | None:intergenic | 10.0% |
| !! | AAAATATTTGTTTCACAAAT+TGG | - | chr1.1:49860130-49860149 | None:intergenic | 15.0% |
| !! | AAATAATAATTACGTGTATT+TGG | + | chr1.1:49856379-49856398 | MS.gene071651:intron | 15.0% |
| !! | ATCAAATTAAATTACTCTTT+AGG | + | chr1.1:49858174-49858193 | MS.gene071651:intron | 15.0% |
| !! | ATTAAAAAAAATGTGTTAGA+AGG | - | chr1.1:49860358-49860377 | None:intergenic | 15.0% |
| !! | TAATAGTATTATAACATTGT+CGG | + | chr1.1:49857680-49857699 | MS.gene071651:intron | 15.0% |
| !!! | AAAAATTCACGATTATTTTT+TGG | - | chr1.1:49858822-49858841 | None:intergenic | 15.0% |
| !!! | AAAGCTAATATTTTTCTAAT+AGG | + | chr1.1:49857387-49857406 | MS.gene071651:intron | 15.0% |
| !!! | AAATTTTTTGTCATCTAAAT+TGG | + | chr1.1:49858455-49858474 | MS.gene071651:CDS | 15.0% |
| !!! | AAGCATATTTTCTTTTAAAA+GGG | - | chr1.1:49858621-49858640 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTCATCTAAATT+GGG | + | chr1.1:49858456-49858475 | MS.gene071651:CDS | 15.0% |
| !!! | ACAAATAATTTTAGAATTCA+CGG | - | chr1.1:49859300-49859319 | None:intergenic | 15.0% |
| !!! | TTCAATACTTATGTATATTT+TGG | - | chr1.1:49856746-49856765 | None:intergenic | 15.0% |
| !!! | TTTTAAATAAGAAATTATGG+AGG | - | chr1.1:49858145-49858164 | None:intergenic | 15.0% |
| !! | AAGAAAAAAAATGAAGAAGA+CGG | - | chr1.1:49860226-49860245 | None:intergenic | 20.0% |
| !! | AGAACTTAAAATAAAAGTGA+AGG | - | chr1.1:49857484-49857503 | None:intergenic | 20.0% |
| !! | ATAAAACACAAATTAAGCTA+GGG | - | chr1.1:49857856-49857875 | None:intergenic | 20.0% |
| !! | TAAAAGAAAATATGCTTCAT+GGG | + | chr1.1:49858624-49858643 | MS.gene071651:intron | 20.0% |
| !! | TAAACATCTATAAGCTTATA+TGG | - | chr1.1:49856651-49856670 | None:intergenic | 20.0% |
| !! | TAATGCAATAATATCTAGAA+AGG | - | chr1.1:49858729-49858748 | None:intergenic | 20.0% |
| !! | TACATATTCATTAACTTCAT+TGG | - | chr1.1:49860093-49860112 | None:intergenic | 20.0% |
| !! | TGATTACAGTTAAAGAATAT+TGG | - | chr1.1:49860729-49860748 | None:intergenic | 20.0% |
| !! | TTAAAAGAAAATATGCTTCA+TGG | + | chr1.1:49858623-49858642 | MS.gene071651:intron | 20.0% |
| !!! | ACTTATACATTGATTCTAAA+AGG | + | chr1.1:49859760-49859779 | MS.gene071651:intron | 20.0% |
| !!! | ATTTGAAACTACTTTTGTTT+GGG | + | chr1.1:49859486-49859505 | MS.gene071651:intron | 20.0% |
| !!! | GAAGCATATTTTCTTTTAAA+AGG | - | chr1.1:49858622-49858641 | None:intergenic | 20.0% |
| !!! | TACTGTTATGACATTTTTAA+GGG | - | chr1.1:49857346-49857365 | None:intergenic | 20.0% |
| !!! | TCGTCAAATTTTTGATATTT+TGG | + | chr1.1:49855746-49855765 | MS.gene071651:CDS | 20.0% |
| !!! | TTCACTTTTATTTTAAGTTC+TGG | + | chr1.1:49857483-49857502 | MS.gene071651:intron | 20.0% |
| !!! | TTTTGTTGTTAAAGGAAAAA+TGG | - | chr1.1:49860324-49860343 | None:intergenic | 20.0% |
| ! | AAAAAATCTGTAATACTTCC+AGG | + | chr1.1:49860950-49860969 | MS.gene071651:intron | 25.0% |
| ! | AAAGCTATCTTACTATGATA+CGG | + | chr1.1:49855352-49855371 | MS.gene071651:intron | 25.0% |
| ! | AAATATAAAGAATAAGCCTG+AGG | + | chr1.1:49857300-49857319 | MS.gene071651:CDS | 25.0% |
| ! | AAATGAAATCTATACTCTGT+TGG | + | chr1.1:49855965-49855984 | MS.gene071651:CDS | 25.0% |
| ! | AAATTTATTCATCAGGAGTT+GGG | + | chr1.1:49859100-49859119 | MS.gene071651:CDS | 25.0% |
| ! | AAGAACAAAGAACATATTGA+TGG | - | chr1.1:49858506-49858525 | None:intergenic | 25.0% |
| ! | AAGCTTACAATATTTGCTTA+TGG | + | chr1.1:49856619-49856638 | MS.gene071651:intron | 25.0% |
| ! | AATTGTTGAAGAAACTCAAA+AGG | + | chr1.1:49859680-49859699 | MS.gene071651:CDS | 25.0% |
| ! | ACGCCAAAATTAATCAAAAT+TGG | - | chr1.1:49856577-49856596 | None:intergenic | 25.0% |
| ! | AGGAACAAAGAACATAAAAA+AGG | - | chr1.1:49858589-49858608 | None:intergenic | 25.0% |
| ! | ATAGAACATGCATCTAAATA+TGG | - | chr1.1:49857809-49857828 | None:intergenic | 25.0% |
| ! | ATCTAGAAAGGAAATGAATA+AGG | - | chr1.1:49858717-49858736 | None:intergenic | 25.0% |
| ! | ATGACAGAAATTTATTCATC+AGG | + | chr1.1:49859093-49859112 | MS.gene071651:CDS | 25.0% |
| ! | CAAACAAAAGTAGTTTCAAA+TGG | - | chr1.1:49859487-49859506 | None:intergenic | 25.0% |
| ! | CAACAAAGAAATGAAACAAA+AGG | - | chr1.1:49859924-49859943 | None:intergenic | 25.0% |
| ! | CACAAAAGAAAGTAATAAGA+TGG | - | chr1.1:49860905-49860924 | None:intergenic | 25.0% |
| ! | CACCCTATATTTATAAATCA+CGG | - | chr1.1:49855685-49855704 | None:intergenic | 25.0% |
| ! | CAGATACTTAAAGCAAATAA+AGG | - | chr1.1:49857644-49857663 | None:intergenic | 25.0% |
| ! | CATAAAATGCTTGTATAACT+TGG | + | chr1.1:49856851-49856870 | MS.gene071651:intron | 25.0% |
| ! | CGACTATAAGTGAATTTAAA+TGG | + | chr1.1:49856915-49856934 | MS.gene071651:intron | 25.0% |
| ! | CGCCAAAATTAATCAAAATT+GGG | - | chr1.1:49856576-49856595 | None:intergenic | 25.0% |
| ! | GAACAAAGATATATGATACA+AGG | - | chr1.1:49857523-49857542 | None:intergenic | 25.0% |
| ! | GATAAAACACAAATTAAGCT+AGG | - | chr1.1:49857857-49857876 | None:intergenic | 25.0% |
| ! | GGAACAAAGAACATAAAAAA+GGG | - | chr1.1:49858588-49858607 | None:intergenic | 25.0% |
| ! | GTAACATAACATCATATAAC+CGG | - | chr1.1:49855639-49855658 | None:intergenic | 25.0% |
| ! | GTCGTGTAATGAAAATAAAA+GGG | + | chr1.1:49855254-49855273 | MS.gene071651:CDS | 25.0% |
| ! | GTGATTTATAAATATAGGGT+GGG | + | chr1.1:49855684-49855703 | MS.gene071651:intron | 25.0% |
| ! | TAAAACTTCTTGTAAATAGC+AGG | - | chr1.1:49856790-49856809 | None:intergenic | 25.0% |
| ! | TAATGCAATTGCAAACTTAA+TGG | + | chr1.1:49859552-49859571 | MS.gene071651:intron | 25.0% |
| ! | TAGATGTTTATGAAGTTACA+TGG | + | chr1.1:49856661-49856680 | MS.gene071651:intron | 25.0% |
| ! | TATGTGAAAGAAACAGTAAT+TGG | + | chr1.1:49856157-49856176 | MS.gene071651:CDS | 25.0% |
| ! | TATGTTCTTTGTTCTTGATA+TGG | + | chr1.1:49858510-49858529 | MS.gene071651:intron | 25.0% |
| ! | TCATCTCAAAATTTGTCAAT+TGG | - | chr1.1:49859716-49859735 | None:intergenic | 25.0% |
| ! | TCTAGAAAGGAAATGAATAA+GGG | - | chr1.1:49858716-49858735 | None:intergenic | 25.0% |
| ! | TGCAAAAATCAAATGATGAA+CGG | - | chr1.1:49859023-49859042 | None:intergenic | 25.0% |
| ! | TGCCGTGATTTATAAATATA+GGG | + | chr1.1:49855680-49855699 | MS.gene071651:intron | 25.0% |
| ! | TGTCGTGTAATGAAAATAAA+AGG | + | chr1.1:49855253-49855272 | MS.gene071651:CDS | 25.0% |
| ! | TTCTTAATGAGATAGAATCT+AGG | + | chr1.1:49860692-49860711 | MS.gene071651:intron | 25.0% |
| ! | TTGAGAAATAGATCCTATAA+TGG | - | chr1.1:49858884-49858903 | None:intergenic | 25.0% |
| ! | TTGCCGTGATTTATAAATAT+AGG | + | chr1.1:49855679-49855698 | MS.gene071651:intron | 25.0% |
| !! | AAACTTAATGGATCATTGTA+GGG | + | chr1.1:49859564-49859583 | MS.gene071651:intron | 25.0% |
| !! | AACATGGTTTTCAATATTGT+TGG | + | chr1.1:49857086-49857105 | MS.gene071651:intron | 25.0% |
| !! | AATTTTTCATCTCTCTTGAA+TGG | + | chr1.1:49858835-49858854 | MS.gene071651:CDS | 25.0% |
| !! | ATTTTTCATCTCTCTTGAAT+GGG | + | chr1.1:49858836-49858855 | MS.gene071651:CDS | 25.0% |
| !! | CTACTGTTATGACATTTTTA+AGG | - | chr1.1:49857347-49857366 | None:intergenic | 25.0% |
| !!! | AAATTTTGAGATGAAGTTCA+AGG | + | chr1.1:49859722-49859741 | MS.gene071651:CDS | 25.0% |
| !!! | ACTGTTATGACATTTTTAAG+GGG | - | chr1.1:49857345-49857364 | None:intergenic | 25.0% |
| !!! | AGCCCAATTTTGATTAATTT+TGG | + | chr1.1:49856571-49856590 | MS.gene071651:intron | 25.0% |
| !!! | CAATTGTTTTTGAATCTGTT+TGG | + | chr1.1:49855408-49855427 | MS.gene071651:intron | 25.0% |
| !!! | CATTTGAAACTACTTTTGTT+TGG | + | chr1.1:49859485-49859504 | MS.gene071651:intron | 25.0% |
| !!! | GAAAGTTTTCAATTTTGACA+AGG | + | chr1.1:49855317-49855336 | MS.gene071651:CDS | 25.0% |
| !!! | GCGTTAATTGTTTTAGAAAT+TGG | + | chr1.1:49858680-49858699 | MS.gene071651:intron | 25.0% |
| !!! | GTATTACAGATTTTTTCAAC+TGG | - | chr1.1:49860946-49860965 | None:intergenic | 25.0% |
| !!! | TCTACTTTTGTTAATTTGCA+AGG | + | chr1.1:49856289-49856308 | MS.gene071651:intron | 25.0% |
| !!! | TGATATATCTGATTTGCTAT+TGG | - | chr1.1:49856330-49856349 | None:intergenic | 25.0% |
| !!! | TTGCATGACAATATTTTTTC+AGG | + | chr1.1:49859038-49859057 | MS.gene071651:intron | 25.0% |
| !!! | TTTGAAACTACTTTTGTTTG+GGG | + | chr1.1:49859487-49859506 | MS.gene071651:intron | 25.0% |
| !!! | TTTTCTTACATCACTTTTAC+TGG | - | chr1.1:49858956-49858975 | None:intergenic | 25.0% |
| AAAACAATTAACGCATGATG+AGG | - | chr1.1:49858674-49858693 | None:intergenic | 30.0% | |
| AACTTTCTCTACTTGTTTGT+TGG | - | chr1.1:49855304-49855323 | None:intergenic | 30.0% | |
| ACAGAAACAACTTAAATGCA+TGG | + | chr1.1:49858906-49858925 | MS.gene071651:CDS | 30.0% | |
| ATAAATGTCAACCAAAGACT+CGG | - | chr1.1:49857955-49857974 | None:intergenic | 30.0% | |
| ATGATCTTCAAGAGAATTAC+AGG | + | chr1.1:49858226-49858245 | MS.gene071651:intron | 30.0% | |
| ATTGATCTCTGTTGTGATTT+CGG | - | chr1.1:49855447-49855466 | None:intergenic | 30.0% | |
| CATGTTAATATGAACCTGTA+AGG | - | chr1.1:49857072-49857091 | None:intergenic | 30.0% | |
| CGTGATTTATAAATATAGGG+TGG | + | chr1.1:49855683-49855702 | MS.gene071651:intron | 30.0% | |
| CTTACAGGTTCATATTAACA+TGG | + | chr1.1:49857070-49857089 | MS.gene071651:intron | 30.0% | |
| GAAATTGAGAGAATGAAAGA+AGG | + | chr1.1:49857456-49857475 | MS.gene071651:CDS | 30.0% | |
| GAAATTTATTCATCAGGAGT+TGG | + | chr1.1:49859099-49859118 | MS.gene071651:CDS | 30.0% | |
| GATTTGCATACAACCATTAT+AGG | + | chr1.1:49858868-49858887 | MS.gene071651:CDS | 30.0% | |
| GTGTTTGTGCAAGAATATAT+TGG | - | chr1.1:49860406-49860425 | None:intergenic | 30.0% | |
| GTTTGCAACATATGATTACA+GGG | + | chr1.1:49856959-49856978 | MS.gene071651:intron | 30.0% | |
| TAGTATTATAACATTGTCGG+AGG | + | chr1.1:49857683-49857702 | MS.gene071651:intron | 30.0% | |
| TCAGAAAATATACTACGTTC+CGG | + | chr1.1:49856232-49856251 | MS.gene071651:CDS | 30.0% | |
| TCATGATTTCAACTTGAGAT+AGG | - | chr1.1:49859334-49859353 | None:intergenic | 30.0% | |
| TCTCAAAATTTGTCAATTGG+TGG | - | chr1.1:49859713-49859732 | None:intergenic | 30.0% | |
| TTCTTCACTCTTTCTTCAAT+AGG | - | chr1.1:49855870-49855889 | None:intergenic | 30.0% | |
| TTCTTTCACATAGACAGTAA+TGG | - | chr1.1:49856149-49856168 | None:intergenic | 30.0% | |
| TTCTTTGTTCTTGATATGGT+GGG | + | chr1.1:49858514-49858533 | MS.gene071651:intron | 30.0% | |
| ! | AATCTGTTTGGTAAGGTTTT+CGG | + | chr1.1:49855420-49855439 | MS.gene071651:intron | 30.0% |
| ! | AGCTAGGTTTCTTTTACTTT+TGG | + | chr1.1:49856045-49856064 | MS.gene071651:intron | 30.0% |
| ! | CAAACTTAATGGATCATTGT+AGG | + | chr1.1:49859563-49859582 | MS.gene071651:intron | 30.0% |
| ! | CAAATTTTTGATCCAAAGCA+TGG | - | chr1.1:49860781-49860800 | None:intergenic | 30.0% |
| ! | CAAGCTTAATCTTGTTGATT+TGG | + | chr1.1:49856204-49856223 | MS.gene071651:CDS | 30.0% |
| ! | CAATTGATGATATGCTACAA+AGG | + | chr1.1:49858310-49858329 | MS.gene071651:intron | 30.0% |
| ! | CTACTTGCTGCAAAATAAAT+TGG | - | chr1.1:49858024-49858043 | None:intergenic | 30.0% |
| ! | CTTTATCTTTGTTATCCTGA+CGG | - | chr1.1:49855066-49855085 | None:intergenic | 30.0% |
| ! | GTTTTTGAATCTGTTTGGTA+AGG | + | chr1.1:49855413-49855432 | MS.gene071651:intron | 30.0% |
| ! | TGTATGACTGAATTTTCCAT+TGG | + | chr1.1:49860475-49860494 | MS.gene071651:intron | 30.0% |
| ! | TTGCAAGGTAATTTGTCATT+TGG | + | chr1.1:49856304-49856323 | MS.gene071651:intron | 30.0% |
| !! | AATTGCTGTAATTTGCTCTA+AGG | - | chr1.1:49859856-49859875 | None:intergenic | 30.0% |
| !! | ATGACATTTTTAAGGGGTAA+TGG | - | chr1.1:49857339-49857358 | None:intergenic | 30.0% |
| !! | CAAACACTTTTTGTTAAGGA+TGG | + | chr1.1:49860419-49860438 | MS.gene071651:intron | 30.0% |
| !! | TGCACAAACACTTTTTGTTA+AGG | + | chr1.1:49860415-49860434 | MS.gene071651:intron | 30.0% |
| !!! | AAACAGCCTTTGAAACTTTT+TGG | - | chr1.1:49857417-49857436 | None:intergenic | 30.0% |
| !!! | TTCTAGTTTTGTTTTGTGTC+TGG | + | chr1.1:49860272-49860291 | MS.gene071651:intron | 30.0% |
| AAAATTTGACGAACTGCTCT+CGG | - | chr1.1:49855738-49855757 | None:intergenic | 35.0% | |
| AAAGAAAGAGGACCAAAATC+AGG | - | chr1.1:49856884-49856903 | None:intergenic | 35.0% | |
| AACATCTAAGAGAACTGCTA+TGG | + | chr1.1:49859887-49859906 | MS.gene071651:CDS | 35.0% | |
| AACTGAAATAGGATCCACTT+TGG | - | chr1.1:49858979-49858998 | None:intergenic | 35.0% | |
| AACTGGTCAAATAAGCGAAA+GGG | - | chr1.1:49860929-49860948 | None:intergenic | 35.0% | |
| AACTGTAATCAATGCTCAAC+AGG | + | chr1.1:49860738-49860757 | MS.gene071651:intron | 35.0% | |
| AAGAGGACTTGAAGAAGAAT+CGG | + | chr1.1:49855932-49855951 | MS.gene071651:CDS | 35.0% | |
| AAGATCATGCAATTCATTGC+TGG | - | chr1.1:49858214-49858233 | None:intergenic | 35.0% | |
| AAGTATTATTTCAGCACGAG+TGG | + | chr1.1:49859596-49859615 | MS.gene071651:CDS | 35.0% | |
| ACATAACATCATATAACCGG+TGG | - | chr1.1:49855636-49855655 | None:intergenic | 35.0% | |
| ACCTTAATATGCATGCCATT+TGG | + | chr1.1:49857126-49857145 | MS.gene071651:intron | 35.0% | |
| AGGATATTACGAGATTCCTT+AGG | + | chr1.1:49857181-49857200 | MS.gene071651:CDS | 35.0% | |
| AGTCTAAGAAAGTAGGGTTA+GGG | + | chr1.1:49854954-49854973 | MS.gene071651:CDS | 35.0% | |
| AGTGGATCCTATTTCAGTTA+CGG | + | chr1.1:49858980-49858999 | MS.gene071651:intron | 35.0% | |
| AGTTCATTACAAGACAAGCA+TGG | + | chr1.1:49861043-49861062 | MS.gene071651:CDS | 35.0% | |
| ATATTACGAGATTCCTTAGG+AGG | + | chr1.1:49857184-49857203 | MS.gene071651:CDS | 35.0% | |
| ATTGTCAATGAAGTTCTCGA+CGG | + | chr1.1:49855489-49855508 | MS.gene071651:CDS | 35.0% | |
| CAAAGAAGAAGCTGAAAAGA+AGG | + | chr1.1:49857617-49857636 | MS.gene071651:CDS | 35.0% | |
| CAATTTCCTTCTTGTTCTCA+TGG | - | chr1.1:49860991-49861010 | None:intergenic | 35.0% | |
| CAGATCAGTCTAAGAAAGTA+GGG | + | chr1.1:49854948-49854967 | MS.gene071651:CDS | 35.0% | |
| CCATTCAAACTACTGAAATC+AGG | + | chr1.1:49858283-49858302 | MS.gene071651:intron | 35.0% | |
| CCTGATTTCAGTAGTTTGAA+TGG | - | chr1.1:49858286-49858305 | None:intergenic | 35.0% | |
| CGAGAACTTCATTGACAATT+GGG | - | chr1.1:49855488-49855507 | None:intergenic | 35.0% | |
| CGTTTGCAACATATGATTAC+AGG | + | chr1.1:49856958-49856977 | MS.gene071651:intron | 35.0% | |
| CTACTTTCTTAGACTGATCT+GGG | - | chr1.1:49854949-49854968 | None:intergenic | 35.0% | |
| GAAATTGTTGAAGGACAACT+GGG | - | chr1.1:49860603-49860622 | None:intergenic | 35.0% | |
| GACTGGTAAAACTTATACGA+TGG | + | chr1.1:49855549-49855568 | MS.gene071651:intron | 35.0% | |
| GAGAACTTCATTGACAATTG+GGG | - | chr1.1:49855487-49855506 | None:intergenic | 35.0% | |
| GATGCATGTTCTATCTTTCT+TGG | + | chr1.1:49857815-49857834 | MS.gene071651:intron | 35.0% | |
| GGCAAACCAAAAAGTTTCAA+AGG | + | chr1.1:49857408-49857427 | MS.gene071651:intron | 35.0% | |
| GGTAAAACTTATACGATGGA+GGG | + | chr1.1:49855553-49855572 | MS.gene071651:intron | 35.0% | |
| GTGATGTAAGAAAACCAAAG+TGG | + | chr1.1:49858962-49858981 | MS.gene071651:intron | 35.0% | |
| GTTCTTGTGGAAATTGTTGA+AGG | - | chr1.1:49860612-49860631 | None:intergenic | 35.0% | |
| GTTCTTTGTTCTTGATATGG+TGG | + | chr1.1:49858513-49858532 | MS.gene071651:intron | 35.0% | |
| TAAATGTCAACCAAAGACTC+GGG | - | chr1.1:49857954-49857973 | None:intergenic | 35.0% | |
| TACTTTCTTAGACTGATCTG+GGG | - | chr1.1:49854948-49854967 | None:intergenic | 35.0% | |
| TATTACGAGATTCCTTAGGA+GGG | + | chr1.1:49857185-49857204 | MS.gene071651:CDS | 35.0% | |
| TCAAGCTTCATTGTATGCTT+TGG | + | chr1.1:49859269-49859288 | MS.gene071651:intron | 35.0% | |
| TCAGAGATAGTAAGCTTACA+AGG | + | chr1.1:49857161-49857180 | MS.gene071651:intron | 35.0% | |
| TCGAGAACTTCATTGACAAT+TGG | - | chr1.1:49855489-49855508 | None:intergenic | 35.0% | |
| TCTTCCAAACAATAAGCAGA+CGG | - | chr1.1:49857244-49857263 | None:intergenic | 35.0% | |
| TGAAATAACAGACAGCCAAA+TGG | - | chr1.1:49857144-49857163 | None:intergenic | 35.0% | |
| TGGTAAAACTTATACGATGG+AGG | + | chr1.1:49855552-49855571 | MS.gene071651:intron | 35.0% | |
| TGTTCTTTGTTCCTGATATG+TGG | + | chr1.1:49858595-49858614 | MS.gene071651:intron | 35.0% | |
| TGTTTCAAAGTTGAAGGAGA+AGG | + | chr1.1:49858254-49858273 | MS.gene071651:intron | 35.0% | |
| TTAAAAATGGAGCAGGAGAT+GGG | - | chr1.1:49854988-49855007 | None:intergenic | 35.0% | |
| TTCTTCCTTCAACCATAAAC+AGG | + | chr1.1:49859803-49859822 | MS.gene071651:intron | 35.0% | |
| TTCTTGCAGATCACAAAGAA+AGG | + | chr1.1:49858782-49858801 | MS.gene071651:intron | 35.0% | |
| TTTGCTCATCAAGAGAATTG+TGG | - | chr1.1:49859420-49859439 | None:intergenic | 35.0% | |
| TTTGTTGAAGGACTTGTACT+TGG | + | chr1.1:49857434-49857453 | MS.gene071651:CDS | 35.0% | |
| ! | AAAGGTAGTGTGTTGTTAAG+AGG | + | chr1.1:49855915-49855934 | MS.gene071651:CDS | 35.0% |
| ! | ACCTTTTCCATCTTCCATAA+GGG | - | chr1.1:49855901-49855920 | None:intergenic | 35.0% |
| ! | AGTATAGTATGACTGACTTC+TGG | + | chr1.1:49859952-49859971 | MS.gene071651:intron | 35.0% |
| ! | CAAGCATGGTGGAAATATAT+CGG | + | chr1.1:49861057-49861076 | MS.gene071651:CDS | 35.0% |
| ! | CTTCTGGCAAATATGCTTTT+AGG | + | chr1.1:49859968-49859987 | MS.gene071651:intron | 35.0% |
| ! | CTTCTTTTCAGCTTCTTCTT+TGG | - | chr1.1:49857619-49857638 | None:intergenic | 35.0% |
| ! | GCTAGTTGTTTCAAAGTTGA+AGG | + | chr1.1:49858248-49858267 | MS.gene071651:intron | 35.0% |
| ! | GTGCCTTGTTAATGATTACT+TGG | + | chr1.1:49861102-49861121 | MS.gene071651:CDS | 35.0% |
| ! | GTTTCTTCTAGTTAGTGTCT+TGG | + | chr1.1:49860665-49860684 | MS.gene071651:intron | 35.0% |
| ! | TACCTTTTCCATCTTCCATA+AGG | - | chr1.1:49855902-49855921 | None:intergenic | 35.0% |
| ! | TGTGTCTGTGTCATTATCTA+TGG | + | chr1.1:49860799-49860818 | MS.gene071651:CDS | 35.0% |
| ! | TTCTAGAAAAAGTTGAGACG+TGG | + | chr1.1:49856689-49856708 | MS.gene071651:intron | 35.0% |
| ! | TTTCAAAGGCTGTTTGTTGA+AGG | + | chr1.1:49857422-49857441 | MS.gene071651:CDS | 35.0% |
| !! | AATATGCTTTTAGGTCTCAG+AGG | + | chr1.1:49859977-49859996 | MS.gene071651:intron | 35.0% |
| !! | AGAAACAGTAATTGGTGATG+AGG | + | chr1.1:49856165-49856184 | MS.gene071651:CDS | 35.0% |
| !! | CTTAATCTTGTTGATTTGGC+TGG | + | chr1.1:49856208-49856227 | MS.gene071651:CDS | 35.0% |
| !! | CTTGGTTTTTCTCCTGATTT+TGG | + | chr1.1:49856869-49856888 | MS.gene071651:intron | 35.0% |
| !! | TACTTCCTCTTGTTGTTGAA+TGG | - | chr1.1:49859460-49859479 | None:intergenic | 35.0% |
| !! | TTAACTTGATGAACGCGTTT+TGG | + | chr1.1:49856098-49856117 | MS.gene071651:intron | 35.0% |
| !! | TTTTAAAAGGGCCACATATC+AGG | - | chr1.1:49858609-49858628 | None:intergenic | 35.0% |
| !!! | TGTTTTAGTTTTCCCTCCTA+AGG | - | chr1.1:49857200-49857219 | None:intergenic | 35.0% |
| AAAACTTATACGATGGAGGG+TGG | + | chr1.1:49855556-49855575 | MS.gene071651:intron | 40.0% | |
| AAACGAAAACTCACCAATCC+TGG | - | chr1.1:49860190-49860209 | None:intergenic | 40.0% | |
| AAACTTATACGATGGAGGGT+GGG | + | chr1.1:49855557-49855576 | MS.gene071651:intron | 40.0% | |
| AAATGTCAACCAAAGACTCG+GGG | - | chr1.1:49857953-49857972 | None:intergenic | 40.0% | |
| AACAGAGCAAGAACAGAAAC+TGG | + | chr1.1:49858066-49858085 | MS.gene071651:CDS | 40.0% | |
| AACATCATATAACCGGTGGA+AGG | - | chr1.1:49855632-49855651 | None:intergenic | 40.0% | |
| AACTGCACTGTCTTTGCTTA+TGG | + | chr1.1:49855516-49855535 | MS.gene071651:CDS | 40.0% | |
| ACAGAGACCGTAACTGAAAT+AGG | - | chr1.1:49858990-49859009 | None:intergenic | 40.0% | |
| AGATCACAAAGAAAGGATGG+AGG | + | chr1.1:49858789-49858808 | MS.gene071651:intron | 40.0% | |
| ATACTTTCTGACTGAGGTTG+AGG | - | chr1.1:49857929-49857948 | None:intergenic | 40.0% | |
| ATCTATACTCTGTTGGAACG+AGG | + | chr1.1:49855972-49855991 | MS.gene071651:CDS | 40.0% | |
| CAACTGGTCAAATAAGCGAA+AGG | - | chr1.1:49860930-49860949 | None:intergenic | 40.0% | |
| CAGCTGTAAAGCTACAATAG+AGG | + | chr1.1:49860157-49860176 | MS.gene071651:CDS | 40.0% | |
| CAGTCTAAGAAAGTAGGGTT+AGG | + | chr1.1:49854953-49854972 | MS.gene071651:CDS | 40.0% | |
| CATCTCCATTCAACAACAAG+AGG | + | chr1.1:49859452-49859471 | MS.gene071651:CDS | 40.0% | |
| CATCTTGACAAACCATGCTT+TGG | + | chr1.1:49860766-49860785 | MS.gene071651:CDS | 40.0% | |
| CATTGCTTAACAAGAGAAGC+AGG | + | chr1.1:49856021-49856040 | MS.gene071651:CDS | 40.0% | |
| CCAGATCAGTCTAAGAAAGT+AGG | + | chr1.1:49854947-49854966 | MS.gene071651:CDS | 40.0% | |
| CCTACTTTCTTAGACTGATC+TGG | - | chr1.1:49854950-49854969 | None:intergenic | 40.0% | |
| CGTGAAAGCTTCATCTGATA+TGG | + | chr1.1:49859152-49859171 | MS.gene071651:CDS | 40.0% | |
| CGTTGTTCTTCATCGCTTAA+TGG | - | chr1.1:49855213-49855232 | None:intergenic | 40.0% | |
| CTCTTCCTGTTTATGGTTGA+AGG | - | chr1.1:49859811-49859830 | None:intergenic | 40.0% | |
| CTTCAACCATAAACAGGAAG+AGG | + | chr1.1:49859809-49859828 | MS.gene071651:intron | 40.0% | |
| GAACATAAAAAAGGGCAACC+CGG | - | chr1.1:49858580-49858599 | None:intergenic | 40.0% | |
| GATGCTGTCAATCACATCAT+TGG | - | chr1.1:49859398-49859417 | None:intergenic | 40.0% | |
| GCAAGAACAGAAACTGGATT+TGG | + | chr1.1:49858072-49858091 | MS.gene071651:CDS | 40.0% | |
| GCAATGCAGTTCAAATACAG+TGG | + | chr1.1:49860550-49860569 | MS.gene071651:intron | 40.0% | |
| GCCAAATGGCATGCATATTA+AGG | - | chr1.1:49857130-49857149 | None:intergenic | 40.0% | |
| GGAAATTGTTGAAGGACAAC+TGG | - | chr1.1:49860604-49860623 | None:intergenic | 40.0% | |
| GGATTGCAAGGTGCATAAAA+TGG | + | chr1.1:49858108-49858127 | MS.gene071651:intron | 40.0% | |
| GTGGCAAGAAACTGTAAAGA+AGG | - | chr1.1:49859361-49859380 | None:intergenic | 40.0% | |
| GTTAAAAATGGAGCAGGAGA+TGG | - | chr1.1:49854989-49855008 | None:intergenic | 40.0% | |
| TACAATAGAGGATTGTCTCC+AGG | + | chr1.1:49860169-49860188 | MS.gene071651:CDS | 40.0% | |
| TAGTCCGTCTGCTTATTGTT+TGG | + | chr1.1:49857237-49857256 | MS.gene071651:CDS | 40.0% | |
| TCATTACAAGACAAGCATGG+TGG | + | chr1.1:49861046-49861065 | MS.gene071651:CDS | 40.0% | |
| TCTAAAAGGTCAAACTTGCG+AGG | + | chr1.1:49859774-49859793 | MS.gene071651:intron | 40.0% | |
| TCTCTGCAAGATTGTTCTTG+TGG | - | chr1.1:49860625-49860644 | None:intergenic | 40.0% | |
| TCTTGATGAGCAAAAACAGC+TGG | + | chr1.1:49859426-49859445 | MS.gene071651:CDS | 40.0% | |
| TGACAATTGGGGAAATTGCT+TGG | - | chr1.1:49855476-49855495 | None:intergenic | 40.0% | |
| TGCAGATCACAAAGAAAGGA+TGG | + | chr1.1:49858786-49858805 | MS.gene071651:intron | 40.0% | |
| TGCTCTACTAGCATAGTCTA+GGG | - | chr1.1:49857278-49857297 | None:intergenic | 40.0% | |
| TTCGTATGCACAAGCACAAT+AGG | - | chr1.1:49857979-49857998 | None:intergenic | 40.0% | |
| TTCTGTGACGACACAATTGT+TGG | + | chr1.1:49861012-49861031 | MS.gene071651:CDS | 40.0% | |
| TTGCTCTACTAGCATAGTCT+AGG | - | chr1.1:49857279-49857298 | None:intergenic | 40.0% | |
| TTGTCAATGAAGTTCTCGAC+GGG | + | chr1.1:49855490-49855509 | MS.gene071651:CDS | 40.0% | |
| TTTACAGTTTCTTGCCACTG+TGG | + | chr1.1:49859363-49859382 | MS.gene071651:intron | 40.0% | |
| ! | ATGGATGCTGATTATGATGC+AGG | + | chr1.1:49860818-49860837 | MS.gene071651:CDS | 40.0% |
| ! | ATGTATTTGCTAGCTCCTTC+AGG | - | chr1.1:49859128-49859147 | None:intergenic | 40.0% |
| ! | CTTTGTTATCCTGACGGTTA+GGG | - | chr1.1:49855060-49855079 | None:intergenic | 40.0% |
| ! | GATGAGGAGTTGATTAAGTG+TGG | + | chr1.1:49856181-49856200 | MS.gene071651:CDS | 40.0% |
| ! | GTATAAGTTTTACCAGTCCC+CGG | - | chr1.1:49855547-49855566 | None:intergenic | 40.0% |
| ! | GTTTTATCAACCCTTCATGC+AGG | + | chr1.1:49857869-49857888 | MS.gene071651:intron | 40.0% |
| ! | TCTTTGTTATCCTGACGGTT+AGG | - | chr1.1:49855061-49855080 | None:intergenic | 40.0% |
| ! | TGTATTTGCTAGCTCCTTCA+GGG | - | chr1.1:49859127-49859146 | None:intergenic | 40.0% |
| !! | TTCAAGTTTTGCTTCGTTGC+AGG | + | chr1.1:49855095-49855114 | MS.gene071651:CDS | 40.0% |
| !! | TTTTTAAGGGGTAATGGCAG+TGG | - | chr1.1:49857333-49857352 | None:intergenic | 40.0% |
| AAACAAGAGCTTACTCACCC+TGG | + | chr1.1:49857005-49857024 | MS.gene071651:CDS | 45.0% | |
| AACAAGAGAAGCAGGTAGCT+AGG | + | chr1.1:49856029-49856048 | MS.gene071651:intron | 45.0% | |
| AACAAGAGCTTACTCACCCT+GGG | + | chr1.1:49857006-49857025 | MS.gene071651:CDS | 45.0% | |
| AACCATAAACAGGAAGAGGC+TGG | + | chr1.1:49859813-49859832 | MS.gene071651:intron | 45.0% | |
| AATCTGCTGGCAGATGTGAA+TGG | + | chr1.1:49860848-49860867 | MS.gene071651:CDS | 45.0% | |
| ACAACGATCGAATGTTCCGA+AGG | + | chr1.1:49855227-49855246 | MS.gene071651:CDS | 45.0% | |
| ACTTCCAGGTGCACTAATGA+TGG | + | chr1.1:49860964-49860983 | MS.gene071651:intron | 45.0% | |
| ATCAACCCTTCATGCAGGAA+AGG | + | chr1.1:49857874-49857893 | MS.gene071651:intron | 45.0% | |
| ATGCGAGCTTAAGGATTGCA+AGG | + | chr1.1:49858096-49858115 | MS.gene071651:CDS | 45.0% | |
| ATTCTGCGCATGTACCTTAC+AGG | + | chr1.1:49857055-49857074 | MS.gene071651:CDS | 45.0% | |
| CAACTTGAGATAGGAGAGCA+TGG | - | chr1.1:49859325-49859344 | None:intergenic | 45.0% | |
| CAAGTGTGCAACAGTCTAAG+AGG | + | chr1.1:49860021-49860040 | MS.gene071651:CDS | 45.0% | |
| CACTCTTTCTTCAATAGGCC+TGG | - | chr1.1:49855865-49855884 | None:intergenic | 45.0% | |
| GAAGAAACCTGTAGCCCTTA+TGG | + | chr1.1:49855884-49855903 | MS.gene071651:CDS | 45.0% | |
| GAGACTCGAGACAAAGAAAG+AGG | - | chr1.1:49856896-49856915 | None:intergenic | 45.0% | |
| GATGGACCATGAGAACAAGA+AGG | + | chr1.1:49860982-49861001 | MS.gene071651:CDS | 45.0% | |
| GCCCTTATGGAAGATGGAAA+AGG | + | chr1.1:49855897-49855916 | MS.gene071651:CDS | 45.0% | |
| GCGTGCAAAGGAAATGTGTA+CGG | + | chr1.1:49858407-49858426 | MS.gene071651:intron | 45.0% | |
| GCTCTGTTAAGTAGAGCTCA+CGG | - | chr1.1:49858054-49858073 | None:intergenic | 45.0% | |
| GTCTTTGCTTATGGACAGAC+CGG | + | chr1.1:49855525-49855544 | MS.gene071651:CDS | 45.0% | |
| TAGAGGATTGTCTCCAGGAT+TGG | + | chr1.1:49860174-49860193 | MS.gene071651:CDS | 45.0% | |
| TCACTCCTTTCCTGCATGAA+GGG | - | chr1.1:49857882-49857901 | None:intergenic | 45.0% | |
| TCATTACACGACACCACCTT+CGG | - | chr1.1:49855246-49855265 | None:intergenic | 45.0% | |
| TCTTTGCTTATGGACAGACC+GGG | + | chr1.1:49855526-49855545 | MS.gene071651:CDS | 45.0% | |
| TGAAGAAGACGGACAAGAAC+AGG | - | chr1.1:49860215-49860234 | None:intergenic | 45.0% | |
| TTCCAGCCTCTTCCTGTTTA+TGG | - | chr1.1:49859818-49859837 | None:intergenic | 45.0% | |
| TTCCATTGGCATTGCTTGCT+TGG | + | chr1.1:49860489-49860508 | MS.gene071651:intron | 45.0% | |
| TTCCTTTGCACGCTCAATCA+AGG | - | chr1.1:49858400-49858419 | None:intergenic | 45.0% | |
| TTGGTGCAGTCGTTCACATT+CGG | + | chr1.1:49856117-49856136 | MS.gene071651:intron | 45.0% | |
| ! | ATTGGCTTCAAGAACCACAG+TGG | - | chr1.1:49859380-49859399 | None:intergenic | 45.0% |
| ! | CGAGGTGTTAAAAATGGAGC+AGG | - | chr1.1:49854995-49855014 | None:intergenic | 45.0% |
| ! | GGATTTGGAATGCGAGCTTA+AGG | + | chr1.1:49858087-49858106 | MS.gene071651:CDS | 45.0% |
| ! | TCGGGTCGAGGTGTTAAAAA+TGG | - | chr1.1:49855001-49855020 | None:intergenic | 45.0% |
| !! | CAAATACAGTGGACTGTTCC+AGG | + | chr1.1:49860561-49860580 | MS.gene071651:CDS | 45.0% |
| !! | GAAAGTATTCCCCGAGTCTT+TGG | + | chr1.1:49857941-49857960 | MS.gene071651:intron | 45.0% |
| !!! | TAATTTAATTTTCTAATTTT+AGG | + | chr1.1:49855187-49855206 | MS.gene071651:intron | 5.0% |
| ACGATCGAATGTTCCGAAGG+TGG | + | chr1.1:49855230-49855249 | MS.gene071651:CDS | 50.0% | |
| ACGTGTGATAAATGCGCTCG+TGG | + | chr1.1:49857029-49857048 | MS.gene071651:CDS | 50.0% | |
| ATCTCCCTGCTTCTCTAGCA+CGG | - | chr1.1:49856985-49857004 | None:intergenic | 50.0% | |
| CACCAAGCAAGCAATGCCAA+TGG | - | chr1.1:49860494-49860513 | None:intergenic | 50.0% | |
| CCATCTTCCATAAGGGCTAC+AGG | - | chr1.1:49855894-49855913 | None:intergenic | 50.0% | |
| CCTGTAGCCCTTATGGAAGA+TGG | + | chr1.1:49855891-49855910 | MS.gene071651:CDS | 50.0% | |
| CGACTCACATTTCCTTCCAC+CGG | + | chr1.1:49855617-49855636 | MS.gene071651:intron | 50.0% | |
| CGCATTTATCACACGTCCCA+GGG | - | chr1.1:49857025-49857044 | None:intergenic | 50.0% | |
| CGGGGAATACTTTCTGACTG+AGG | - | chr1.1:49857935-49857954 | None:intergenic | 50.0% | |
| CTCACTCCTTTCCTGCATGA+AGG | - | chr1.1:49857883-49857902 | None:intergenic | 50.0% | |
| CTCCAGAAGACAGTTCTACC+AGG | + | chr1.1:49855844-49855863 | MS.gene071651:CDS | 50.0% | |
| CTTTGCTTATGGACAGACCG+GGG | + | chr1.1:49855527-49855546 | MS.gene071651:CDS | 50.0% | |
| GGAGGGTGGGATGAGAAATA+AGG | + | chr1.1:49855570-49855589 | MS.gene071651:intron | 50.0% | |
| GGTGATTTAACTGCTGAGGC+TGG | + | chr1.1:49855705-49855724 | MS.gene071651:CDS | 50.0% | |
| GGTGGGTGATTTAACTGCTG+AGG | + | chr1.1:49855701-49855720 | MS.gene071651:CDS | 50.0% | |
| TGCAGGAACACACAATCTGC+TGG | + | chr1.1:49860835-49860854 | MS.gene071651:CDS | 50.0% | |
| TGCCTTGATTGAGCGTGCAA+AGG | + | chr1.1:49858395-49858414 | MS.gene071651:intron | 50.0% | |
| TGGTCCATCATTAGTGCACC+TGG | - | chr1.1:49860971-49860990 | None:intergenic | 50.0% | |
| TTCAGCACGAGTGGTTTCAG+AGG | + | chr1.1:49859605-49859624 | MS.gene071651:CDS | 50.0% | |
| ! | TGCTTTTACCTCACGTGCTC+CGG | - | chr1.1:49856254-49856273 | None:intergenic | 50.0% |
| !! | AGAGGCGTCAAGGAATATGC+AGG | + | chr1.1:49859995-49860014 | MS.gene071651:CDS | 50.0% |
| !! | TGGAACGAGGAGCATCAAAG+AGG | + | chr1.1:49855985-49856004 | MS.gene071651:CDS | 50.0% |
| !! | TTTAGGTCTCAGAGGCGTCA+AGG | + | chr1.1:49859985-49860004 | MS.gene071651:intron | 50.0% |
| !! | TTTTCAGGCAGCACATGCTC+TGG | + | chr1.1:49859053-49859072 | MS.gene071651:intron | 50.0% |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr1.1:49858554-49858573 | None:intergenic | 55.0% | |
| AGAGGCTGGAAGAGATGAGG+AGG | + | chr1.1:49859827-49859846 | MS.gene071651:CDS | 55.0% | |
| ATCAGGAGTTGGGACCCTGA+AGG | + | chr1.1:49859110-49859129 | MS.gene071651:CDS | 55.0% | |
| ATGCAGATGTACGAGCAGCG+AGG | + | chr1.1:49857556-49857575 | MS.gene071651:intron | 55.0% | |
| CCGATCAGAGCCTCGTGAAT+CGG | - | chr1.1:49855035-49855054 | None:intergenic | 55.0% | |
| CGAGCAGCGAGGGAAAAGAA+TGG | + | chr1.1:49857567-49857586 | MS.gene071651:CDS | 55.0% | |
| CGATCAGAGCCTCGTGAATC+GGG | - | chr1.1:49855034-49855053 | None:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr1.1:49858553-49858572 | None:intergenic | 55.0% | |
| GCGCATTTATCACACGTCCC+AGG | - | chr1.1:49857026-49857045 | None:intergenic | 55.0% | |
| GGAAGAGGCTGGAAGAGATG+AGG | + | chr1.1:49859824-49859843 | MS.gene071651:intron | 55.0% | |
| GGACTGTTCCAGGAAGCAGT+GGG | + | chr1.1:49860571-49860590 | MS.gene071651:CDS | 55.0% | |
| GGCCTGGTAGAACTGTCTTC+TGG | - | chr1.1:49855849-49855868 | None:intergenic | 55.0% | |
| TGATCGGAACCCTAACCGTC+AGG | + | chr1.1:49855048-49855067 | MS.gene071651:CDS | 55.0% | |
| TGCAGATGTACGAGCAGCGA+GGG | + | chr1.1:49857557-49857576 | MS.gene071651:intron | 55.0% | |
| TGGACTGTTCCAGGAAGCAG+TGG | + | chr1.1:49860570-49860589 | MS.gene071651:CDS | 55.0% | |
| TGGCAGTGGTAACTGACCTC+AGG | - | chr1.1:49857319-49857338 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr1.1:49858558-49858577 | MS.gene071651:intron | 55.0% |
| ! | CCGATTCACGAGGCTCTGAT+CGG | + | chr1.1:49855032-49855051 | MS.gene071651:CDS | 55.0% |
| !! | CAGCACATGCTCTGGAAGCA+AGG | + | chr1.1:49859061-49859080 | MS.gene071651:CDS | 55.0% |
| ACTACGTTCCGGAGCACGTG+AGG | + | chr1.1:49856243-49856262 | MS.gene071651:CDS | 60.0% | |
| AGCCTCGTGAATCGGGACGA+CGG | - | chr1.1:49855027-49855046 | None:intergenic | 60.0% | |
| AGGGCCGTGCTAGAGAAGCA+GGG | + | chr1.1:49856978-49856997 | MS.gene071651:intron | 60.0% | |
| CATACGCAGGGTCTGGGAAG+GGG | - | chr1.1:49858541-49858560 | None:intergenic | 60.0% | |
| CTTATGGACAGACCGGGGAC+TGG | + | chr1.1:49855532-49855551 | MS.gene071651:CDS | 60.0% | |
| CTTCCCAGACCCTGCGTATG+CGG | + | chr1.1:49858541-49858560 | MS.gene071651:intron | 60.0% | |
| GCATACGCAGGGTCTGGGAA+GGG | - | chr1.1:49858542-49858561 | None:intergenic | 60.0% | |
| GGCACTTTCCCACTGCTTCC+TGG | - | chr1.1:49860582-49860601 | None:intergenic | 60.0% | |
| TGAATCGGGACGACGGCGTT+CGG | - | chr1.1:49855020-49855039 | None:intergenic | 60.0% | |
| TTCCCAGACCCTGCGTATGC+GGG | + | chr1.1:49858542-49858561 | MS.gene071651:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr1.1:49858559-49858578 | MS.gene071651:intron | 60.0% |
| CAGGGCCGTGCTAGAGAAGC+AGG | + | chr1.1:49856977-49856996 | MS.gene071651:intron | 65.0% | |
| CGCATACGCAGGGTCTGGGA+AGG | - | chr1.1:49858543-49858562 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTCT+GGG | - | chr1.1:49858547-49858566 | None:intergenic | 65.0% | |
| GAATCGGGACGACGGCGTTC+GGG | - | chr1.1:49855019-49855038 | None:intergenic | 65.0% | |
| CGCCGTCGTCCCGATTCACG+AGG | + | chr1.1:49855022-49855041 | MS.gene071651:CDS | 70.0% | |
| GCTCCCGCATACGCAGGGTC+TGG | - | chr1.1:49858548-49858567 | None:intergenic | 70.0% | |
| GGACGACGGCGTTCGGGTCG+AGG | - | chr1.1:49855013-49855032 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 49854910 | 49861123 | 49854910 | ID=MS.gene071651 |
| chr1.1 | mRNA | 49854910 | 49861123 | 49854910 | ID=MS.gene071651.t1;Parent=MS.gene071651 |
| chr1.1 | exon | 49854910 | 49855116 | 49854910 | ID=MS.gene071651.t1.exon1;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49854910 | 49855116 | 49854910 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49855209 | 49855338 | 49855209 | ID=MS.gene071651.t1.exon2;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49855209 | 49855338 | 49855209 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49855435 | 49855553 | 49855435 | ID=MS.gene071651.t1.exon3;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49855435 | 49855553 | 49855435 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49855701 | 49856042 | 49855701 | ID=MS.gene071651.t1.exon4;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49855701 | 49856042 | 49855701 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49856126 | 49856264 | 49856126 | ID=MS.gene071651.t1.exon5;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49856126 | 49856264 | 49856126 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49856991 | 49857076 | 49856991 | ID=MS.gene071651.t1.exon6;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49856991 | 49857076 | 49856991 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49857165 | 49857325 | 49857165 | ID=MS.gene071651.t1.exon7;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49857165 | 49857325 | 49857165 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49857409 | 49857477 | 49857409 | ID=MS.gene071651.t1.exon8;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49857409 | 49857477 | 49857409 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49857562 | 49857638 | 49857562 | ID=MS.gene071651.t1.exon9;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49857562 | 49857638 | 49857562 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49857891 | 49857944 | 49857891 | ID=MS.gene071651.t1.exon10;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49857891 | 49857944 | 49857891 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49858037 | 49858117 | 49858037 | ID=MS.gene071651.t1.exon11;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49858037 | 49858117 | 49858037 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49858408 | 49858477 | 49858408 | ID=MS.gene071651.t1.exon12;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49858408 | 49858477 | 49858408 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49858791 | 49858966 | 49858791 | ID=MS.gene071651.t1.exon13;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49858791 | 49858966 | 49858791 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49859060 | 49859221 | 49859060 | ID=MS.gene071651.t1.exon14;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49859060 | 49859221 | 49859060 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49859370 | 49859480 | 49859370 | ID=MS.gene071651.t1.exon15;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49859370 | 49859480 | 49859370 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49859585 | 49859743 | 49859585 | ID=MS.gene071651.t1.exon16;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49859585 | 49859743 | 49859585 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49859825 | 49859908 | 49859825 | ID=MS.gene071651.t1.exon17;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49859825 | 49859908 | 49859825 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49859990 | 49860195 | 49859990 | ID=MS.gene071651.t1.exon18;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49859990 | 49860195 | 49859990 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49860559 | 49860660 | 49860559 | ID=MS.gene071651.t1.exon19;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49860559 | 49860660 | 49860559 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49860760 | 49860869 | 49860760 | ID=MS.gene071651.t1.exon20;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49860760 | 49860869 | 49860760 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| chr1.1 | exon | 49860972 | 49861123 | 49860972 | ID=MS.gene071651.t1.exon21;Parent=MS.gene071651.t1 |
| chr1.1 | CDS | 49860972 | 49861123 | 49860972 | ID=cds.MS.gene071651.t1;Parent=MS.gene071651.t1 |
| Gene Sequence |
| Protein sequence |
