Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61977.t1 | XP_003610438.1 | 87.9 | 636 | 75 | 1 | 1 | 634 | 81 | 716 | 9.50E-266 | 926 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61977.t1 | G7JJ78 | 87.9 | 636 | 75 | 1 | 1 | 634 | 81 | 716 | 6.8e-266 | 926.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene61977 | 0.843566 | 1.29E-58 | -1.69E-46 |
| MS.gene049596 | MS.gene61977 | 0.825104 | 5.62E-54 | -1.69E-46 |
| MS.gene049622 | MS.gene61977 | 0.823052 | 1.71E-53 | -1.69E-46 |
| MS.gene049660 | MS.gene61977 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene04985 | MS.gene61977 | 0.833578 | 4.92E-56 | -1.69E-46 |
| MS.gene049989 | MS.gene61977 | 0.923856 | 1.53E-89 | -1.69E-46 |
| MS.gene050297 | MS.gene61977 | 0.903437 | 3.47E-79 | -1.69E-46 |
| MS.gene05054 | MS.gene61977 | 0.817511 | 3.17E-52 | -1.69E-46 |
| MS.gene050648 | MS.gene61977 | 0.824695 | 7.02E-54 | -1.69E-46 |
| MS.gene051087 | MS.gene61977 | 0.805494 | 1.30E-49 | -1.69E-46 |
| MS.gene051094 | MS.gene61977 | 0.825514 | 4.50E-54 | -1.69E-46 |
| MS.gene05124 | MS.gene61977 | 0.846531 | 2.05E-59 | -1.69E-46 |
| MS.gene051339 | MS.gene61977 | 0.82823 | 1.01E-54 | -1.69E-46 |
| MS.gene051423 | MS.gene61977 | 0.847485 | 1.12E-59 | -1.69E-46 |
| MS.gene051629 | MS.gene61977 | 0.848876 | 4.64E-60 | -1.69E-46 |
| MS.gene051742 | MS.gene61977 | 0.892079 | 2.21E-74 | -1.69E-46 |
| MS.gene051816 | MS.gene61977 | 0.832945 | 7.08E-56 | -1.69E-46 |
| MS.gene051914 | MS.gene61977 | 0.808377 | 3.19E-50 | -1.69E-46 |
| MS.gene051955 | MS.gene61977 | 0.883486 | 4.31E-71 | -1.69E-46 |
| MS.gene052143 | MS.gene61977 | 0.852205 | 5.38E-61 | -1.69E-46 |
| MS.gene052169 | MS.gene61977 | 0.801542 | 8.57E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene61977 | 0.87522 | 3.66E-68 | -1.69E-46 |
| MS.gene052367 | MS.gene61977 | 0.919119 | 6.70E-87 | -1.69E-46 |
| MS.gene053173 | MS.gene61977 | 0.890729 | 7.57E-74 | -1.69E-46 |
| MS.gene053348 | MS.gene61977 | 0.858428 | 8.30E-63 | -1.69E-46 |
| MS.gene053416 | MS.gene61977 | 0.910222 | 2.39E-82 | -1.69E-46 |
| MS.gene053417 | MS.gene61977 | 0.908966 | 9.58E-82 | -1.69E-46 |
| MS.gene05369 | MS.gene61977 | 0.861558 | 9.43E-64 | -1.69E-46 |
| MS.gene053929 | MS.gene61977 | 0.81801 | 2.45E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene61977 | 0.874049 | 9.15E-68 | -1.69E-46 |
| MS.gene054552 | MS.gene61977 | 0.845765 | 3.31E-59 | -1.69E-46 |
| MS.gene054593 | MS.gene61977 | 0.878168 | 3.49E-69 | -1.69E-46 |
| MS.gene054633 | MS.gene61977 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene054643 | MS.gene61977 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene054885 | MS.gene61977 | 0.815894 | 7.32E-52 | -1.69E-46 |
| MS.gene055308 | MS.gene61977 | 0.890071 | 1.37E-73 | -1.69E-46 |
| MS.gene055411 | MS.gene61977 | 0.816412 | 5.61E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene61977 | 0.88589 | 5.50E-72 | -1.69E-46 |
| MS.gene055579 | MS.gene61977 | 0.812241 | 4.68E-51 | -1.69E-46 |
| MS.gene055957 | MS.gene61977 | 0.871434 | 6.85E-67 | -1.69E-46 |
| MS.gene056041 | MS.gene61977 | 0.921695 | 2.57E-88 | -1.69E-46 |
| MS.gene056042 | MS.gene61977 | 0.845803 | 3.23E-59 | -1.69E-46 |
| MS.gene05640 | MS.gene61977 | 0.880072 | 7.42E-70 | -1.69E-46 |
| MS.gene056526 | MS.gene61977 | 0.903342 | 3.83E-79 | -1.69E-46 |
| MS.gene056528 | MS.gene61977 | 0.842748 | 2.14E-58 | -1.69E-46 |
| MS.gene05732 | MS.gene61977 | 0.814159 | 1.78E-51 | -1.69E-46 |
| MS.gene057357 | MS.gene61977 | 0.809749 | 1.62E-50 | -1.69E-46 |
| MS.gene057358 | MS.gene61977 | 0.833006 | 6.83E-56 | -1.69E-46 |
| MS.gene057359 | MS.gene61977 | 0.820503 | 6.63E-53 | -1.69E-46 |
| MS.gene057367 | MS.gene61977 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene057458 | MS.gene61977 | 0.860442 | 2.06E-63 | -1.69E-46 |
| MS.gene057483 | MS.gene61977 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene058128 | MS.gene61977 | 0.809276 | 2.05E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene61977 | 0.850212 | 1.97E-60 | -1.69E-46 |
| MS.gene058197 | MS.gene61977 | 0.836925 | 7.03E-57 | -1.69E-46 |
| MS.gene058198 | MS.gene61977 | 0.836794 | 7.59E-57 | -1.69E-46 |
| MS.gene058818 | MS.gene61977 | 0.828962 | 6.72E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene61977 | 0.859034 | 5.47E-63 | -1.69E-46 |
| MS.gene058828 | MS.gene61977 | 0.826864 | 2.15E-54 | -1.69E-46 |
| MS.gene058844 | MS.gene61977 | 0.817585 | 3.06E-52 | -1.69E-46 |
| MS.gene058849 | MS.gene61977 | 0.818211 | 2.21E-52 | -1.69E-46 |
| MS.gene058853 | MS.gene61977 | 0.849861 | 2.46E-60 | -1.69E-46 |
| MS.gene059300 | MS.gene61977 | 0.874102 | 8.78E-68 | -1.69E-46 |
| MS.gene059553 | MS.gene61977 | 0.859597 | 3.71E-63 | -1.69E-46 |
| MS.gene060473 | MS.gene61977 | 0.936155 | 2.73E-97 | -1.69E-46 |
| MS.gene060565 | MS.gene61977 | 0.931866 | 2.00E-94 | -1.69E-46 |
| MS.gene06057 | MS.gene61977 | 0.887616 | 1.22E-72 | -1.69E-46 |
| MS.gene06093 | MS.gene61977 | 0.900445 | 7.27E-78 | -1.69E-46 |
| MS.gene061099 | MS.gene61977 | 0.8853 | 9.16E-72 | -1.69E-46 |
| MS.gene061260 | MS.gene61977 | 0.92344 | 2.65E-89 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61977.t1 | MTR_4g132160 | 89.780 | 636 | 63 | 1 | 1 | 634 | 81 | 716 | 0.0 | 1137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61977.t1 | AT2G16270 | 30.170 | 411 | 179 | 16 | 12 | 392 | 73 | 405 | 8.62e-25 | 110 |
| MS.gene61977.t1 | AT1G16630 | 28.738 | 428 | 188 | 17 | 6 | 386 | 87 | 444 | 8.15e-23 | 104 |
Find 117 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATGATGTTAAATTAAT+TGG | 0.132466 | 8.2:-2099186 | MS.gene61977:CDS |
| ATTTCGATGGATGAGTATTT+TGG | 0.246831 | 8.2:-2099627 | MS.gene61977:CDS |
| TCGTTCGGAATTCGCATATT+TGG | 0.274234 | 8.2:-2099848 | MS.gene61977:CDS |
| GTTGATACTGGTTCATTAGA+TGG | 0.302929 | 8.2:-2100683 | MS.gene61977:CDS |
| CATCCTCCGATGATTCCTTC+TGG | 0.310532 | 8.2:+2100183 | None:intergenic |
| TCTAATTCCATTAGCGGCTT+TGG | 0.321351 | 8.2:+2100275 | None:intergenic |
| GATCATCAGCCCTTGGTGTT+TGG | 0.342756 | 8.2:+2099289 | None:intergenic |
| TTATGAGTCTTCTGAACTTT+CGG | 0.349539 | 8.2:-2099931 | MS.gene61977:CDS |
| AGAACAACTTCAGCATGATA+TGG | 0.356822 | 8.2:-2099571 | MS.gene61977:CDS |
| TTACAAACCAAAGCCGCTAA+TGG | 0.368219 | 8.2:-2100282 | MS.gene61977:CDS |
| GGTCGCGGTGAAAATAAAAT+AGG | 0.371380 | 8.2:-2099693 | MS.gene61977:CDS |
| GACACAGATGCTGCAATTAG+AGG | 0.373147 | 8.2:-2099075 | MS.gene61977:CDS |
| CTGATCCTTTAGAACAGAAA+AGG | 0.377539 | 8.2:-2100706 | MS.gene61977:CDS |
| TTTCTGAACAAAGTCCTGTT+AGG | 0.378281 | 8.2:-2100121 | MS.gene61977:CDS |
| GAGTTGATTTCAGATGTTAG+AGG | 0.389002 | 8.2:-2099798 | MS.gene61977:CDS |
| GAATCATTGTTTAGAATCAT+AGG | 0.390137 | 8.2:+2100542 | None:intergenic |
| GCTGGCGATCTAACCTTTGC+CGG | 0.391178 | 8.2:+2100881 | None:intergenic |
| TCAAGTTAAAGTACTGCAAC+TGG | 0.391552 | 8.2:+2099760 | None:intergenic |
| GTTAATCAGAGTCCTATCTT+TGG | 0.391685 | 8.2:-2099714 | MS.gene61977:CDS |
| GAACAGAAAAGGGTTGATAC+TGG | 0.407790 | 8.2:-2100695 | MS.gene61977:CDS |
| ATCCTCCGATGATTCCTTCT+GGG | 0.408425 | 8.2:+2100184 | None:intergenic |
| GCAACGTGTGTTTCTTGAAC+AGG | 0.414525 | 8.2:+2099657 | None:intergenic |
| AAATATGCCAAGTTCAAATT+CGG | 0.415242 | 8.2:-2099262 | MS.gene61977:CDS |
| ATCTCAGCAACTTCTGAAAC+TGG | 0.416066 | 8.2:+2099132 | None:intergenic |
| GCATTAGCAGTGTAAGAAAC+TGG | 0.418494 | 8.2:+2100392 | None:intergenic |
| ACCAGTTGCAAAGCCTGCTC+TGG | 0.418548 | 8.2:+2099336 | None:intergenic |
| GAGGACAGTTTCATTATGTC+AGG | 0.419021 | 8.2:-2100254 | MS.gene61977:CDS |
| ACCAGAGCAGGCTTTGCAAC+TGG | 0.419706 | 8.2:-2099337 | MS.gene61977:CDS |
| TTCTGATGAAACTGTGAAGC+AGG | 0.425432 | 8.2:-2100156 | MS.gene61977:CDS |
| AAAGCCGCTAATGGAATTAG+AGG | 0.426519 | 8.2:-2100273 | MS.gene61977:CDS |
| GCGGCTTTGGTTTGTAATGA+AGG | 0.426809 | 8.2:+2100288 | None:intergenic |
| CGCGGGCCAATCTACTACTT+TGG | 0.432526 | 8.2:-2099364 | MS.gene61977:CDS |
| GTTGATTTCGATGTTGCAGC+TGG | 0.440851 | 8.2:+2100863 | None:intergenic |
| AAAAGATCAGTTTATGAAAC+CGG | 0.441090 | 8.2:-2100900 | None:intergenic |
| TGAACATTTAGATGCAAAGT+TGG | 0.442587 | 8.2:-2099445 | MS.gene61977:CDS |
| CTGTCCTCTAATTCCATTAG+CGG | 0.445999 | 8.2:+2100269 | None:intergenic |
| GAACAACTTCAGCATGATAT+GGG | 0.446308 | 8.2:-2099570 | MS.gene61977:CDS |
| TCTGGCAAGAGAGTCCTAAC+AGG | 0.449217 | 8.2:+2100107 | None:intergenic |
| ATTTCAATCACAAATTCTCC+AGG | 0.449988 | 8.2:-2099987 | MS.gene61977:CDS |
| CTATACTTGCTGCTTTGTGC+AGG | 0.459222 | 8.2:-2099006 | MS.gene61977:intron |
| ACTGGAGGAGTAGCCGCGGC+TGG | 0.464928 | 8.2:+2100410 | None:intergenic |
| CGGTGACTCAGCCATCTTGA+AGG | 0.465883 | 8.2:+2100808 | None:intergenic |
| CCGACAACAAAATTCATGTT+CGG | 0.467578 | 8.2:-2100742 | MS.gene61977:CDS |
| TGAATTTCCGAATTTGAACT+TGG | 0.469755 | 8.2:+2099255 | None:intergenic |
| TCCAGGGTCTCATGCTGTGT+TGG | 0.473321 | 8.2:-2099970 | MS.gene61977:CDS |
| TAATGAAGGAATTGTGGCCT+AGG | 0.475030 | 8.2:+2100302 | None:intergenic |
| CACTGGATTTGAAAATGCAT+TGG | 0.480475 | 8.2:-2099541 | MS.gene61977:CDS |
| TGAGTCCAATGTTGTTCCTA+TGG | 0.481899 | 8.2:-2100600 | MS.gene61977:CDS |
| TGATCCTTTAGAACAGAAAA+GGG | 0.482946 | 8.2:-2100705 | MS.gene61977:CDS |
| GTTCTACCAAAGTAGTAGAT+TGG | 0.488968 | 8.2:+2099358 | None:intergenic |
| CATGATATGGGGATGAACAC+TGG | 0.495085 | 8.2:-2099558 | MS.gene61977:CDS |
| TCTGATTCTATATAAGTAGC+AGG | 0.505688 | 8.2:+2099483 | None:intergenic |
| TTGATACTGGTTCATTAGAT+GGG | 0.506576 | 8.2:-2100682 | MS.gene61977:CDS |
| AGCATCAACAAGAGGGTCTA+CGG | 0.513163 | 8.2:+2100370 | None:intergenic |
| CAAAATGAAGTCTGTGGTGA+AGG | 0.513393 | 8.2:-2099234 | MS.gene61977:CDS |
| GCTGGACTAAGCTTAAAAGT+AGG | 0.515924 | 8.2:+2100428 | None:intergenic |
| CAGCTGATATTCCCACTGCT+TGG | 0.516834 | 8.2:+2099097 | None:intergenic |
| GAATCATTGTTTCTAATCAA+AGG | 0.517302 | 8.2:+2100470 | None:intergenic |
| CAGACTCACAACTCGGAAAG+AGG | 0.517493 | 8.2:+2100648 | None:intergenic |
| TTATATAGAATCAGAAGAGC+AGG | 0.518245 | 8.2:-2099475 | MS.gene61977:CDS |
| TGAAGATGCTTTAGAGTCTG+AGG | 0.522367 | 8.2:-2099394 | MS.gene61977:CDS |
| AGAGAAAACAGTTGAAGCAA+AGG | 0.522792 | 8.2:-2100087 | MS.gene61977:CDS |
| GGAATTGTGGCCTAGGGGAT+AGG | 0.532945 | 8.2:+2100309 | None:intergenic |
| GGTTTGTAATGAAGGAATTG+TGG | 0.549064 | 8.2:+2100296 | None:intergenic |
| TTCATCAGACTGAGTATCCT+CGG | 0.550240 | 8.2:+2100208 | None:intergenic |
| ATCTGAAATCAACTCAGAGA+TGG | 0.558056 | 8.2:+2099806 | None:intergenic |
| CTGGACTAAGCTTAAAAGTA+GGG | 0.562564 | 8.2:+2100429 | None:intergenic |
| TACTTTGGTAGAACCAGAGC+AGG | 0.564168 | 8.2:-2099349 | MS.gene61977:CDS |
| AGATCGAATGCTTGATTCAG+TGG | 0.565707 | 8.2:-2096424 | MS.gene61977:CDS |
| AATGAAGGAATTGTGGCCTA+GGG | 0.570744 | 8.2:+2100303 | None:intergenic |
| TCAGTTTATGAAACCGGCAA+AGG | 0.571045 | 8.2:-2100894 | None:intergenic |
| TGAACTTTCGGAGTTTGCAA+AGG | 0.572896 | 8.2:-2099919 | MS.gene61977:CDS |
| CAACAAAATTCATGTTCGGA+AGG | 0.575732 | 8.2:-2100738 | MS.gene61977:CDS |
| ATCATCCATAGGAACAACAT+TGG | 0.578422 | 8.2:+2100595 | None:intergenic |
| AGGTAATGTAGATACAAAGC+TGG | 0.578760 | 8.2:-2099214 | MS.gene61977:CDS |
| AGAGTCTGAGGAAGCACTCG+CGG | 0.581478 | 8.2:-2099382 | MS.gene61977:CDS |
| GAGTCTGAGGAAGCACTCGC+GGG | 0.584357 | 8.2:-2099381 | MS.gene61977:CDS |
| TCCAACACAGCATGAGACCC+TGG | 0.586313 | 8.2:+2099969 | None:intergenic |
| ACACAGATGCTGCAATTAGA+GGG | 0.588423 | 8.2:-2099074 | MS.gene61977:CDS |
| CAGAGTCCTATCTTTGGTCG+CGG | 0.593626 | 8.2:-2099708 | MS.gene61977:CDS |
| GATCTCTGCTTCCTTCAAGA+TGG | 0.595344 | 8.2:-2100819 | MS.gene61977:CDS |
| TAAGCTTAAAAGTAGGGTCA+AGG | 0.597364 | 8.2:+2100435 | None:intergenic |
| GTTGAATCAGTATACTCAGA+AGG | 0.600194 | 8.2:-2099315 | MS.gene61977:CDS |
| AAACAAATTACCTATCCCCT+AGG | 0.602260 | 8.2:-2100319 | MS.gene61977:CDS |
| GAGGAATCAGCATCAACAAG+AGG | 0.603625 | 8.2:+2100362 | None:intergenic |
| ACGTGTGTTTCTTGAACAGG+AGG | 0.607471 | 8.2:+2099660 | None:intergenic |
| CAAGTTAAAGTACTGCAACT+GGG | 0.609993 | 8.2:+2099761 | None:intergenic |
| AAATCTTCAGACTCACAACT+CGG | 0.613094 | 8.2:+2100641 | None:intergenic |
| CGTTGCCTCAGAGATTTCGA+TGG | 0.613875 | 8.2:-2099640 | MS.gene61977:CDS |
| TGAATCCCAGAAGGAATCAT+CGG | 0.616386 | 8.2:-2100189 | MS.gene61977:CDS |
| GAAATTCAAAATGAAGTCTG+TGG | 0.622812 | 8.2:-2099240 | MS.gene61977:CDS |
| TTTCAATCACAAATTCTCCA+GGG | 0.626416 | 8.2:-2099986 | MS.gene61977:CDS |
| TAGGCTCGTTCCTCTCCGCA+AGG | 0.628949 | 8.2:+2100774 | None:intergenic |
| TTGTTGTCGGAAGAAGGAGT+AGG | 0.632543 | 8.2:+2100755 | None:intergenic |
| ATTGGATGCTCAAGAATCTG+AGG | 0.642965 | 8.2:-2099523 | MS.gene61977:CDS |
| TTATACGACAAATCATCCAT+AGG | 0.646153 | 8.2:+2100584 | None:intergenic |
| TCAGTCTGATGAATCCCAGA+AGG | 0.647686 | 8.2:-2100198 | MS.gene61977:CDS |
| AACAACTTCAGCATGATATG+GGG | 0.647874 | 8.2:-2099569 | MS.gene61977:CDS |
| AGGAATCAGCATCAACAAGA+GGG | 0.648359 | 8.2:+2100363 | None:intergenic |
| TTCGATCTCAAAGAAAAGCG+TGG | 0.648845 | 8.2:+2100053 | None:intergenic |
| TTGAAGGAAGCAGAGATCGT+CGG | 0.654068 | 8.2:+2100824 | None:intergenic |
| TTCAGATACAGATGTTACCG+AGG | 0.656226 | 8.2:-2100225 | MS.gene61977:CDS |
| GAAAGAAAATCCTTGCGGAG+AGG | 0.661412 | 8.2:-2100784 | MS.gene61977:CDS |
| CTCATCCATCGAAATCTCTG+AGG | 0.661658 | 8.2:+2099635 | None:intergenic |
| CACACGGATGACCAAGCAGT+GGG | 0.663869 | 8.2:-2099108 | MS.gene61977:CDS |
| AGAAGGAGACCAAACACCAA+GGG | 0.671884 | 8.2:-2099298 | MS.gene61977:CDS |
| GAATCTGAGGAAGTGCACAA+TGG | 0.672121 | 8.2:-2099510 | MS.gene61977:CDS |
| CAGAAGGAGACCAAACACCA+AGG | 0.672990 | 8.2:-2099299 | MS.gene61977:CDS |
| ACCGAGAAAGAAAATCCTTG+CGG | 0.686892 | 8.2:-2100789 | MS.gene61977:CDS |
| ATCCCAGAAGGAATCATCGG+AGG | 0.688240 | 8.2:-2100186 | MS.gene61977:CDS |
| AGAAACTGGAGGAGTAGCCG+CGG | 0.691010 | 8.2:+2100406 | None:intergenic |
| ACACACGGATGACCAAGCAG+TGG | 0.696307 | 8.2:-2099109 | MS.gene61977:CDS |
| ATGAAGGAATTGTGGCCTAG+GGG | 0.699302 | 8.2:+2100304 | None:intergenic |
| AGAAGTTGCTGAGATACACA+CGG | 0.700965 | 8.2:-2099124 | MS.gene61977:CDS |
| TTAGCAGTGTAAGAAACTGG+AGG | 0.719518 | 8.2:+2100395 | None:intergenic |
| CGTGTGTTTCTTGAACAGGA+GGG | 0.721446 | 8.2:+2099661 | None:intergenic |
| AGGGTCATAAGGTGGCACAG+AGG | 0.740482 | 8.2:+2100343 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAATTAATGTATAAAAT+TGG | - | chr8.2:2100622-2100641 | MS.gene61977:CDS | 10.0% |
| !!! | TATTTTTTATTAATGAATGA+TGG | - | chr8.2:2098998-2099017 | MS.gene61977:intron | 10.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr8.2:2100537-2100556 | MS.gene61977:CDS | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr8.2:2100556-2100537 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr8.2:2100538-2100557 | MS.gene61977:CDS | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr8.2:2100557-2100538 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr8.2:2100346-2100365 | MS.gene61977:CDS | 15.0% |
| !! | GAAAATGATGTTAAATTAAT+TGG | - | chr8.2:2098114-2098133 | MS.gene61977:intron | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr8.2:2100465-2100446 | None:intergenic | 15.0% |
| !!! | AATTTTGCAATAATTTTTTG+CGG | - | chr8.2:2100381-2100400 | MS.gene61977:CDS | 15.0% |
| !!! | TCATCATATTGTTTTTTATA+GGG | - | chr8.2:2098754-2098773 | MS.gene61977:intron | 15.0% |
| !!! | TTCATCATATTGTTTTTTAT+AGG | - | chr8.2:2098753-2098772 | MS.gene61977:intron | 15.0% |
| !!! | TTCTTGATTTTGTAATTAAT+TGG | - | chr8.2:2100780-2100799 | MS.gene61977:CDS | 15.0% |
| !! | AAAAAAATCAAGCATTCAAA+TGG | + | chr8.2:2100806-2100825 | None:intergenic | 20.0% |
| !! | AAATCATGTCGAATATATAT+TGG | - | chr8.2:2100051-2100070 | MS.gene61977:CDS | 20.0% |
| !! | AATACAACATGATATATCAA+CGG | + | chr8.2:2099503-2099522 | None:intergenic | 20.0% |
| !! | AATCATGTCGAATATATATT+GGG | - | chr8.2:2100052-2100071 | MS.gene61977:CDS | 20.0% |
| !! | AATGCAGAAAAACAAAATTA+GGG | - | chr8.2:2100509-2100528 | MS.gene61977:CDS | 20.0% |
| !! | AGTTTAATAGCAAATAAATG+AGG | - | chr8.2:2099415-2099434 | MS.gene61977:CDS | 20.0% |
| !! | CAAGTTGTTAATTCTATAAA+AGG | + | chr8.2:2099717-2099736 | None:intergenic | 20.0% |
| !! | TAAACACTAGTTAAATATGT+AGG | + | chr8.2:2099565-2099584 | None:intergenic | 20.0% |
| !! | TGTGACATAAATATTATGAT+TGG | - | chr8.2:2099137-2099156 | MS.gene61977:CDS | 20.0% |
| !! | TGTTAATTCTATAAAAGGTT+TGG | + | chr8.2:2099712-2099731 | None:intergenic | 20.0% |
| !!! | TAAAAAATCCAGAATTTTGT+TGG | + | chr8.2:2099029-2099048 | None:intergenic | 20.0% |
| !!! | TTAAGATGTTTATGTTGATT+TGG | + | chr8.2:2099084-2099103 | None:intergenic | 20.0% |
| ! | AAAAAAGCCCCATAAATTAT+TGG | + | chr8.2:2099860-2099879 | None:intergenic | 25.0% |
| ! | AAAAAGCCCCATAAATTATT+GGG | + | chr8.2:2099859-2099878 | None:intergenic | 25.0% |
| ! | AAACGAATTTGAATTGAGTA+GGG | - | chr8.2:2100476-2100495 | MS.gene61977:CDS | 25.0% |
| ! | AAAGAATTGGTATGATTGAA+TGG | - | chr8.2:2100698-2100717 | MS.gene61977:CDS | 25.0% |
| ! | AAATATGCCAAGTTCAAATT+CGG | - | chr8.2:2098038-2098057 | MS.gene61977:intron | 25.0% |
| ! | AATGCAACATGATATATCAA+CGG | + | chr8.2:2099615-2099634 | None:intergenic | 25.0% |
| ! | AATGTATGAGAAAATTCCAA+AGG | - | chr8.2:2098653-2098672 | MS.gene61977:intron | 25.0% |
| ! | ATAACAAATAAAAACCTAGC+TGG | + | chr8.2:2099205-2099224 | None:intergenic | 25.0% |
| ! | ATGCAACATGATATTATCAA+CGG | + | chr8.2:2099532-2099551 | None:intergenic | 25.0% |
| ! | CAATGCAGAAAAACAAAATT+AGG | - | chr8.2:2100508-2100527 | MS.gene61977:CDS | 25.0% |
| ! | TAAACGAATTTGAATTGAGT+AGG | - | chr8.2:2100475-2100494 | MS.gene61977:CDS | 25.0% |
| ! | TAACAAATAAAAACCTAGCT+GGG | + | chr8.2:2099204-2099223 | None:intergenic | 25.0% |
| ! | TAATCTTAATAAGCATAGTG+TGG | - | chr8.2:2099101-2099120 | MS.gene61977:CDS | 25.0% |
| ! | TCATGTAAACTTAAGTTCTA+TGG | - | chr8.2:2099745-2099764 | MS.gene61977:CDS | 25.0% |
| ! | TGTATTCTTAAAATTGGTAG+TGG | - | chr8.2:2099301-2099320 | MS.gene61977:CDS | 25.0% |
| ! | TTCTTGCAAACTCTAATAAT+TGG | - | chr8.2:2099900-2099919 | MS.gene61977:CDS | 25.0% |
| !! | ATCATACCAATTCTTTTAGA+CGG | + | chr8.2:2100694-2100713 | None:intergenic | 25.0% |
| !! | GAAGAGTGTATTCTTAAAAT+TGG | - | chr8.2:2099295-2099314 | MS.gene61977:CDS | 25.0% |
| !! | GAATCATTGTTTAGAATCAT+AGG | + | chr8.2:2096761-2096780 | None:intergenic | 25.0% |
| !! | TTATGAGAAATCAAGTTTTG+TGG | + | chr8.2:2099775-2099794 | None:intergenic | 25.0% |
| !!! | AAAGGAACATTTTGAAATGA+GGG | + | chr8.2:2096815-2096834 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr8.2:2100186-2100205 | None:intergenic | 25.0% |
| !!! | GAATCATTGTTTCTAATCAA+AGG | + | chr8.2:2096833-2096852 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr8.2:2100187-2100206 | None:intergenic | 25.0% |
| !!! | TAATTTGTTTTAGGGTCATA+AGG | + | chr8.2:2096971-2096990 | None:intergenic | 25.0% |
| AAGGTCATCCCAATAATTTA+TGG | - | chr8.2:2099848-2099867 | MS.gene61977:CDS | 30.0% | |
| AGCAACAACTGAATAAACTA+AGG | - | chr8.2:2099829-2099848 | MS.gene61977:CDS | 30.0% | |
| AGGTCATCCCAATAATTTAT+GGG | - | chr8.2:2099849-2099868 | MS.gene61977:CDS | 30.0% | |
| ATACATTGTTAGACTTCCAT+AGG | + | chr8.2:2098640-2098659 | None:intergenic | 30.0% | |
| ATTACACCGTCTAAAAGAAT+TGG | - | chr8.2:2100685-2100704 | MS.gene61977:CDS | 30.0% | |
| ATTTCAATCACAAATTCTCC+AGG | - | chr8.2:2097313-2097332 | MS.gene61977:intron | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr8.2:2100249-2100268 | MS.gene61977:CDS | 30.0% | |
| CATGTTGTAGTTAATAAGAG+AGG | + | chr8.2:2099246-2099265 | None:intergenic | 30.0% | |
| GAAATTCAAAATGAAGTCTG+TGG | - | chr8.2:2098060-2098079 | MS.gene61977:intron | 30.0% | |
| TACCATGTATGTAAACATGT+AGG | + | chr8.2:2099458-2099477 | None:intergenic | 30.0% | |
| TAGAAATACATTCACATTGC+AGG | + | chr8.2:2098908-2098927 | None:intergenic | 30.0% | |
| TCTGATTCTATATAAGTAGC+AGG | + | chr8.2:2097820-2097839 | None:intergenic | 30.0% | |
| TGAACATTTAGATGCAAAGT+TGG | - | chr8.2:2097855-2097874 | MS.gene61977:intron | 30.0% | |
| TGAATTTCCGAATTTGAACT+TGG | + | chr8.2:2098048-2098067 | None:intergenic | 30.0% | |
| TGCAACATGATATTATCAAC+GGG | + | chr8.2:2099531-2099550 | None:intergenic | 30.0% | |
| TTAACTAGTGTTTACTTACG+TGG | - | chr8.2:2099571-2099590 | MS.gene61977:CDS | 30.0% | |
| TTATACGACAAATCATCCAT+AGG | + | chr8.2:2096719-2096738 | None:intergenic | 30.0% | |
| TTATATAGAATCAGAAGAGC+AGG | - | chr8.2:2097825-2097844 | MS.gene61977:intron | 30.0% | |
| TTATGAGTCTTCTGAACTTT+CGG | - | chr8.2:2097369-2097388 | MS.gene61977:intron | 30.0% | |
| TTGCAAACTCTAATAATTGG+TGG | - | chr8.2:2099903-2099922 | MS.gene61977:CDS | 30.0% | |
| TTTCAATCACAAATTCTCCA+GGG | - | chr8.2:2097314-2097333 | MS.gene61977:intron | 30.0% | |
| ! | AAGTATAGCACAATGTTTTG+AGG | + | chr8.2:2098282-2098301 | None:intergenic | 30.0% |
| ! | ATTTCGATGGATGAGTATTT+TGG | - | chr8.2:2097673-2097692 | MS.gene61977:intron | 30.0% |
| !! | AAAATTCGCTTTTGCAAACT+GGG | + | chr8.2:2097425-2097444 | None:intergenic | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr8.2:2100569-2100588 | MS.gene61977:CDS | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr8.2:2100588-2100569 | None:intergenic | 30.0% |
| !! | TGATCCTTTAGAACAGAAAA+GGG | - | chr8.2:2096595-2096614 | MS.gene61977:intron | 30.0% |
| !! | TGTTGCTATTCGTTTCTTTT+AGG | + | chr8.2:2099816-2099835 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr8.2:2100568-2100587 | MS.gene61977:CDS | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr8.2:2100587-2100568 | None:intergenic | 30.0% |
| !! | TTGATACTGGTTCATTAGAT+GGG | - | chr8.2:2096618-2096637 | MS.gene61977:intron | 30.0% |
| !!! | ACAACATGACTTTTTTACCA+GGG | - | chr8.2:2099258-2099277 | MS.gene61977:CDS | 30.0% |
| !!! | CAAAGGAACATTTTGAAATG+AGG | + | chr8.2:2096816-2096835 | None:intergenic | 30.0% |
| !!! | CTAATAATTGGTGGTTTTAG+CGG | - | chr8.2:2099912-2099931 | MS.gene61977:CDS | 30.0% |
| !!! | GGGATAGGTAATTTGTTTTA+GGG | + | chr8.2:2096979-2096998 | None:intergenic | 30.0% |
| !!! | TACAACATGACTTTTTTACC+AGG | - | chr8.2:2099257-2099276 | MS.gene61977:CDS | 30.0% |
| !!! | TATTGTTTTTTATAGGGACG+CGG | - | chr8.2:2098760-2098779 | MS.gene61977:intron | 30.0% |
| AAACAAATTACCTATCCCCT+AGG | - | chr8.2:2096981-2097000 | MS.gene61977:intron | 35.0% | |
| AAATCTTCAGACTCACAACT+CGG | + | chr8.2:2096662-2096681 | None:intergenic | 35.0% | |
| AACAACTTCAGCATGATATG+GGG | - | chr8.2:2097731-2097750 | MS.gene61977:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr8.2:2100553-2100572 | MS.gene61977:CDS | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | chr8.2:2100572-2100553 | None:intergenic | 35.0% | |
| AGAACAACTTCAGCATGATA+TGG | - | chr8.2:2097729-2097748 | MS.gene61977:intron | 35.0% | |
| AGAGAAAACAGTTGAAGCAA+AGG | - | chr8.2:2097213-2097232 | MS.gene61977:intron | 35.0% | |
| AGGTAATGTAGATACAAAGC+TGG | - | chr8.2:2098086-2098105 | MS.gene61977:intron | 35.0% | |
| ATCATCCATAGGAACAACAT+TGG | + | chr8.2:2096708-2096727 | None:intergenic | 35.0% | |
| ATTGTTAGACTTCCATAGGA+TGG | + | chr8.2:2098636-2098655 | None:intergenic | 35.0% | |
| CAACAAAATTCATGTTCGGA+AGG | - | chr8.2:2096562-2096581 | MS.gene61977:intron | 35.0% | |
| CAATCAACAATACTCACCTT+TGG | + | chr8.2:2098672-2098691 | None:intergenic | 35.0% | |
| CACTGGATTTGAAAATGCAT+TGG | - | chr8.2:2097759-2097778 | MS.gene61977:intron | 35.0% | |
| CCGACAACAAAATTCATGTT+CGG | - | chr8.2:2096558-2096577 | MS.gene61977:intron | 35.0% | |
| CTGGACTAAGCTTAAAAGTA+GGG | + | chr8.2:2096874-2096893 | None:intergenic | 35.0% | |
| GAACAACTTCAGCATGATAT+GGG | - | chr8.2:2097730-2097749 | MS.gene61977:intron | 35.0% | |
| GGTCATCCCAATAATTTATG+GGG | - | chr8.2:2099850-2099869 | MS.gene61977:CDS | 35.0% | |
| GGTTTGTAATGAAGGAATTG+TGG | + | chr8.2:2097007-2097026 | None:intergenic | 35.0% | |
| GTTAATCAGAGTCCTATCTT+TGG | - | chr8.2:2097586-2097605 | MS.gene61977:intron | 35.0% | |
| GTTCTACCAAAGTAGTAGAT+TGG | + | chr8.2:2097945-2097964 | None:intergenic | 35.0% | |
| GTTGAATCAGTATACTCAGA+AGG | - | chr8.2:2097985-2098004 | MS.gene61977:intron | 35.0% | |
| TAAGCTTAAAAGTAGGGTCA+AGG | + | chr8.2:2096868-2096887 | None:intergenic | 35.0% | |
| TGATTGAATGGTTGATTACG+TGG | - | chr8.2:2100710-2100729 | MS.gene61977:CDS | 35.0% | |
| TTTCTGAACAAAGTCCTGTT+AGG | - | chr8.2:2097179-2097198 | MS.gene61977:intron | 35.0% | |
| ! | ATCTGAAATCAACTCAGAGA+TGG | + | chr8.2:2097497-2097516 | None:intergenic | 35.0% |
| ! | GAGTTGATTTCAGATGTTAG+AGG | - | chr8.2:2097502-2097521 | MS.gene61977:intron | 35.0% |
| ! | TCAACCCTTTTCTGTTCTAA+AGG | + | chr8.2:2096602-2096621 | None:intergenic | 35.0% |
| ! | TGTGTTGGAAGACTTTTATG+AGG | - | chr8.2:2097345-2097364 | MS.gene61977:intron | 35.0% |
| ! | TTTGCAAAAGCGAATTTTGC+AGG | - | chr8.2:2097427-2097446 | MS.gene61977:intron | 35.0% |
| ! | TTTGCTTCAACTGTTTTCTC+TGG | + | chr8.2:2097214-2097233 | None:intergenic | 35.0% |
| !! | CAAAAAGTTTACTAGCTCTG+TGG | - | chr8.2:2098374-2098393 | MS.gene61977:intron | 35.0% |
| !! | CAAAATTCGCTTTTGCAAAC+TGG | + | chr8.2:2097426-2097445 | None:intergenic | 35.0% |
| !! | CAAGTTAAAGTACTGCAACT+GGG | + | chr8.2:2097542-2097561 | None:intergenic | 35.0% |
| !! | CCGAACATGAATTTTGTTGT+CGG | + | chr8.2:2096561-2096580 | None:intergenic | 35.0% |
| !! | CTGATCCTTTAGAACAGAAA+AGG | - | chr8.2:2096594-2096613 | MS.gene61977:intron | 35.0% |
| !! | GTTGATACTGGTTCATTAGA+TGG | - | chr8.2:2096617-2096636 | MS.gene61977:intron | 35.0% |
| !! | TCAAGTTAAAGTACTGCAAC+TGG | + | chr8.2:2097543-2097562 | None:intergenic | 35.0% |
| !! | TGAATTTTGTTGTCGGAAGA+AGG | + | chr8.2:2096554-2096573 | None:intergenic | 35.0% |
| !!! | CAACATGACTTTTTTACCAG+GGG | - | chr8.2:2099259-2099278 | MS.gene61977:CDS | 35.0% |
| !!! | GGGGATAGGTAATTTGTTTT+AGG | + | chr8.2:2096980-2096999 | None:intergenic | 35.0% |
| !!! | TTTGTTTTAGGGTCATAAGG+TGG | + | chr8.2:2096968-2096987 | None:intergenic | 35.0% |
| AAAAACCTAGCTGGGTTTCT+TGG | + | chr8.2:2099196-2099215 | None:intergenic | 40.0% | |
| AAAGCCGCTAATGGAATTAG+AGG | - | chr8.2:2097027-2097046 | MS.gene61977:intron | 40.0% | |
| AATGAAGGAATTGTGGCCTA+GGG | + | chr8.2:2097000-2097019 | None:intergenic | 40.0% | |
| ACACAGATGCTGCAATTAGA+GGG | - | chr8.2:2098226-2098245 | MS.gene61977:intron | 40.0% | |
| ACCGAGAAAGAAAATCCTTG+CGG | - | chr8.2:2096511-2096530 | MS.gene61977:intron | 40.0% | |
| AGAAGTTGCTGAGATACACA+CGG | - | chr8.2:2098176-2098195 | MS.gene61977:intron | 40.0% | |
| AGATCGAATGCTTGATTCAG+TGG | - | chr8.2:2100876-2100895 | MS.gene61977:CDS | 40.0% | |
| AGGAATCAGCATCAACAAGA+GGG | + | chr8.2:2096940-2096959 | None:intergenic | 40.0% | |
| ATTGGATGCTCAAGAATCTG+AGG | - | chr8.2:2097777-2097796 | MS.gene61977:intron | 40.0% | |
| CAAAATGAAGTCTGTGGTGA+AGG | - | chr8.2:2098066-2098085 | MS.gene61977:intron | 40.0% | |
| CAAAGCTGCTCATTTCTGAA+GGG | + | chr8.2:2098497-2098516 | None:intergenic | 40.0% | |
| CGCCTACATGTTTACATACA+TGG | - | chr8.2:2099453-2099472 | MS.gene61977:CDS | 40.0% | |
| CTGTCCTCTAATTCCATTAG+CGG | + | chr8.2:2097034-2097053 | None:intergenic | 40.0% | |
| GAGGACAGTTTCATTATGTC+AGG | - | chr8.2:2097046-2097065 | MS.gene61977:intron | 40.0% | |
| GCATTAGCAGTGTAAGAAAC+TGG | + | chr8.2:2096911-2096930 | None:intergenic | 40.0% | |
| GCTGGACTAAGCTTAAAAGT+AGG | + | chr8.2:2096875-2096894 | None:intergenic | 40.0% | |
| GGTCGCGGTGAAAATAAAAT+AGG | - | chr8.2:2097607-2097626 | MS.gene61977:intron | 40.0% | |
| TAATGAAGGAATTGTGGCCT+AGG | + | chr8.2:2097001-2097020 | None:intergenic | 40.0% | |
| TCAAAGCTGCTCATTTCTGA+AGG | + | chr8.2:2098498-2098517 | None:intergenic | 40.0% | |
| TCCTCATAGATGGCTTATCT+GGG | + | chr8.2:2098437-2098456 | None:intergenic | 40.0% | |
| TCGTTCGGAATTCGCATATT+TGG | - | chr8.2:2097452-2097471 | MS.gene61977:intron | 40.0% | |
| TCTAATTCCATTAGCGGCTT+TGG | + | chr8.2:2097028-2097047 | None:intergenic | 40.0% | |
| TGAACTTTCGGAGTTTGCAA+AGG | - | chr8.2:2097381-2097400 | MS.gene61977:intron | 40.0% | |
| TGAATCCCAGAAGGAATCAT+CGG | - | chr8.2:2097111-2097130 | MS.gene61977:intron | 40.0% | |
| TGAGTCCAATGTTGTTCCTA+TGG | - | chr8.2:2096700-2096719 | MS.gene61977:intron | 40.0% | |
| TGGTTGCTCCAACAAAATTC+TGG | - | chr8.2:2099018-2099037 | MS.gene61977:CDS | 40.0% | |
| TTACAAACCAAAGCCGCTAA+TGG | - | chr8.2:2097018-2097037 | MS.gene61977:intron | 40.0% | |
| TTAGCAGTGTAAGAAACTGG+AGG | + | chr8.2:2096908-2096927 | None:intergenic | 40.0% | |
| TTAGGCGTTCAAGTAGGATT+AGG | - | chr8.2:2098806-2098825 | MS.gene61977:intron | 40.0% | |
| TTCAGATACAGATGTTACCG+AGG | - | chr8.2:2097075-2097094 | MS.gene61977:intron | 40.0% | |
| TTCAGCCTGATTCAAGAGTA+TGG | + | chr8.2:2099938-2099957 | None:intergenic | 40.0% | |
| TTCATCAGACTGAGTATCCT+CGG | + | chr8.2:2097095-2097114 | None:intergenic | 40.0% | |
| TTCCTCATAGATGGCTTATC+TGG | + | chr8.2:2098438-2098457 | None:intergenic | 40.0% | |
| TTCGATCTCAAAGAAAAGCG+TGG | + | chr8.2:2097250-2097269 | None:intergenic | 40.0% | |
| TTCTGATGAAACTGTGAAGC+AGG | - | chr8.2:2097144-2097163 | MS.gene61977:intron | 40.0% | |
| TTCTGCTTAACAAATACCCC+TGG | + | chr8.2:2099278-2099297 | None:intergenic | 40.0% | |
| TTGGCATTAGAGTGAAAGTG+AGG | + | chr8.2:2099065-2099084 | None:intergenic | 40.0% | |
| TTGTCCTCAGATCCAATCTT+AGG | + | chr8.2:2098405-2098424 | None:intergenic | 40.0% | |
| ! | CGAATTTTGCAGGTTTCGTT+CGG | - | chr8.2:2097437-2097456 | MS.gene61977:intron | 40.0% |
| ! | TCCGCAAGGATTTTCTTTCT+CGG | + | chr8.2:2096515-2096534 | None:intergenic | 40.0% |
| ! | TTGCAGGTGCAACTTTTAAC+TGG | - | chr8.2:2098328-2098347 | MS.gene61977:intron | 40.0% |
| ! | TTTTCATGATCATCAGCCCT+TGG | + | chr8.2:2098021-2098040 | None:intergenic | 40.0% |
| !! | ATCTCAGCAACTTCTGAAAC+TGG | + | chr8.2:2098171-2098190 | None:intergenic | 40.0% |
| !! | GAACAGAAAAGGGTTGATAC+TGG | - | chr8.2:2096605-2096624 | MS.gene61977:intron | 40.0% |
| !! | GTGCAACTTTTAACTGGTCA+AGG | - | chr8.2:2098334-2098353 | MS.gene61977:intron | 40.0% |
| !! | TGAAGATGCTTTAGAGTCTG+AGG | - | chr8.2:2097906-2097925 | MS.gene61977:intron | 40.0% |
| !!! | ACGCTTTTCTTTGAGATCGA+AGG | - | chr8.2:2097249-2097268 | MS.gene61977:intron | 40.0% |
| AACCGCTTATACAGGAGAAG+TGG | + | chr8.2:2098839-2098858 | None:intergenic | 45.0% | |
| ACAGGCACATTCCTCATAGA+TGG | + | chr8.2:2098447-2098466 | None:intergenic | 45.0% | |
| ACGTGTGTTTCTTGAACAGG+AGG | + | chr8.2:2097643-2097662 | None:intergenic | 45.0% | |
| ACTCTCTCCTGTGGTAATTC+CGG | + | chr8.2:2098581-2098600 | None:intergenic | 45.0% | |
| AGAAGGAGACCAAACACCAA+GGG | - | chr8.2:2098002-2098021 | MS.gene61977:intron | 45.0% | |
| AGCATCAACAAGAGGGTCTA+CGG | + | chr8.2:2096933-2096952 | None:intergenic | 45.0% | |
| AGGAGATAGTTACTCCGGTT+AGG | - | chr8.2:2098788-2098807 | MS.gene61977:intron | 45.0% | |
| AGGTATGCAAAGTTATGCGC+AGG | + | chr8.2:2098888-2098907 | None:intergenic | 45.0% | |
| ATCCTACTTGAACGCCTAAC+CGG | + | chr8.2:2098805-2098824 | None:intergenic | 45.0% | |
| ATCCTCCGATGATTCCTTCT+GGG | + | chr8.2:2097119-2097138 | None:intergenic | 45.0% | |
| ATGAAGGAATTGTGGCCTAG+GGG | + | chr8.2:2096999-2097018 | None:intergenic | 45.0% | |
| CATGATATGGGGATGAACAC+TGG | - | chr8.2:2097742-2097761 | MS.gene61977:intron | 45.0% | |
| CCAGCAAAAACCGCTTATAC+AGG | + | chr8.2:2098847-2098866 | None:intergenic | 45.0% | |
| CCTCATAGATGGCTTATCTG+GGG | + | chr8.2:2098436-2098455 | None:intergenic | 45.0% | |
| CGAAGAGGAGATAGTTACTC+CGG | - | chr8.2:2098783-2098802 | MS.gene61977:intron | 45.0% | |
| CGTGTGTTTCTTGAACAGGA+GGG | + | chr8.2:2097642-2097661 | None:intergenic | 45.0% | |
| CTCATCCATCGAAATCTCTG+AGG | + | chr8.2:2097668-2097687 | None:intergenic | 45.0% | |
| GAAAGAAAATCCTTGCGGAG+AGG | - | chr8.2:2096516-2096535 | MS.gene61977:intron | 45.0% | |
| GAAGCCTAAGATTGGATCTG+AGG | - | chr8.2:2098398-2098417 | MS.gene61977:intron | 45.0% | |
| GACACAGATGCTGCAATTAG+AGG | - | chr8.2:2098225-2098244 | MS.gene61977:intron | 45.0% | |
| GAGGAATCAGCATCAACAAG+AGG | + | chr8.2:2096941-2096960 | None:intergenic | 45.0% | |
| GAGGAATGTGCCTGTAGAAA+TGG | - | chr8.2:2098452-2098471 | MS.gene61977:intron | 45.0% | |
| GATCTCTGCTTCCTTCAAGA+TGG | - | chr8.2:2096481-2096500 | MS.gene61977:intron | 45.0% | |
| GCAACGTGTGTTTCTTGAAC+AGG | + | chr8.2:2097646-2097665 | None:intergenic | 45.0% | |
| TACTTTGGTAGAACCAGAGC+AGG | - | chr8.2:2097951-2097970 | MS.gene61977:intron | 45.0% | |
| TCAGTCTGATGAATCCCAGA+AGG | - | chr8.2:2097102-2097121 | MS.gene61977:intron | 45.0% | |
| TCTGTGGAGAAGCCTAAGAT+TGG | - | chr8.2:2098390-2098409 | MS.gene61977:intron | 45.0% | |
| TGCAAAGTTATGCGCAGGTT+AGG | + | chr8.2:2098883-2098902 | None:intergenic | 45.0% | |
| TTGAAGGAAGCAGAGATCGT+CGG | + | chr8.2:2096479-2096498 | None:intergenic | 45.0% | |
| TTGTTGTCGGAAGAAGGAGT+AGG | + | chr8.2:2096548-2096567 | None:intergenic | 45.0% | |
| ! | CCTGTATAAGCGGTTTTTGC+TGG | - | chr8.2:2098844-2098863 | MS.gene61977:intron | 45.0% |
| ! | GAATCTGAGGAAGTGCACAA+TGG | - | chr8.2:2097790-2097809 | MS.gene61977:intron | 45.0% |
| ! | GCAGGTACGGTTTTTATTGC+AGG | - | chr8.2:2098312-2098331 | MS.gene61977:intron | 45.0% |
| ! | GTTGATTTCGATGTTGCAGC+TGG | + | chr8.2:2096440-2096459 | None:intergenic | 45.0% |
| ! | TGCCACTTCTCCTGTATAAG+CGG | - | chr8.2:2098834-2098853 | MS.gene61977:intron | 45.0% |
| ! | TTTTAAGCTTAGTCCAGCCG+CGG | - | chr8.2:2096877-2096896 | MS.gene61977:intron | 45.0% |
| ! | TTTTCACCGCGACCAAAGAT+AGG | + | chr8.2:2097601-2097620 | None:intergenic | 45.0% |
| !! | CTATACTTGCTGCTTTGTGC+AGG | - | chr8.2:2098294-2098313 | MS.gene61977:intron | 45.0% |
| !! | GCGGCTTTGGTTTGTAATGA+AGG | + | chr8.2:2097015-2097034 | None:intergenic | 45.0% |
| !! | ATTAATTCTTAAAATATATA+TGG | + | chr8.2:2100613-2100632 | None:intergenic | 5.0% |
| !! | TTAATTCTTAAAATATATAT+GGG | + | chr8.2:2100612-2100631 | None:intergenic | 5.0% |
| !!! | TATAAGTAATTTTTTTTATA+GGG | + | chr8.2:2100155-2100174 | None:intergenic | 5.0% |
| !!! | TTATAAGTAATTTTTTTTAT+AGG | + | chr8.2:2100156-2100175 | None:intergenic | 5.0% |
| AACCTAGCTGGGTTTCTTGG+TGG | + | chr8.2:2099193-2099212 | None:intergenic | 50.0% | |
| ACCCATGGAGTAGTCAGAAG+AGG | + | chr8.2:2098610-2098629 | None:intergenic | 50.0% | |
| AGCGGCCATACTCTTGAATC+AGG | - | chr8.2:2099930-2099949 | MS.gene61977:CDS | 50.0% | |
| ATCCCAGAAGGAATCATCGG+AGG | - | chr8.2:2097114-2097133 | MS.gene61977:intron | 50.0% | |
| ATGCGCAGGTTAGGTGATGT+AGG | + | chr8.2:2098874-2098893 | None:intergenic | 50.0% | |
| CAGAAGGAGACCAAACACCA+AGG | - | chr8.2:2098001-2098020 | MS.gene61977:intron | 50.0% | |
| CAGACTCACAACTCGGAAAG+AGG | + | chr8.2:2096655-2096674 | None:intergenic | 50.0% | |
| CAGAGTCCTATCTTTGGTCG+CGG | - | chr8.2:2097592-2097611 | MS.gene61977:intron | 50.0% | |
| CAGCTGATATTCCCACTGCT+TGG | + | chr8.2:2098206-2098225 | None:intergenic | 50.0% | |
| CATCCTCCGATGATTCCTTC+TGG | + | chr8.2:2097120-2097139 | None:intergenic | 50.0% | |
| CCAACCACGTCCATTTCTAC+AGG | + | chr8.2:2098465-2098484 | None:intergenic | 50.0% | |
| CCCCAGATAAGCCATCTATG+AGG | - | chr8.2:2098433-2098452 | MS.gene61977:intron | 50.0% | |
| CCTGTAGAAATGGACGTGGT+TGG | - | chr8.2:2098462-2098481 | MS.gene61977:intron | 50.0% | |
| CGTTGCCTCAGAGATTTCGA+TGG | - | chr8.2:2097660-2097679 | MS.gene61977:intron | 50.0% | |
| GCCTCTTCTGACTACTCCAT+GGG | - | chr8.2:2098606-2098625 | MS.gene61977:intron | 50.0% | |
| TCCATAGGATGGTGAACCCA+TGG | + | chr8.2:2098625-2098644 | None:intergenic | 50.0% | |
| TCCATGGGTTCACCATCCTA+TGG | - | chr8.2:2098621-2098640 | MS.gene61977:intron | 50.0% | |
| TCTGGCAAGAGAGTCCTAAC+AGG | + | chr8.2:2097196-2097215 | None:intergenic | 50.0% | |
| TGTGCCTGTAGAAATGGACG+TGG | - | chr8.2:2098458-2098477 | MS.gene61977:intron | 50.0% | |
| TTACCACAGGAGAGAGTCGT+TGG | - | chr8.2:2098584-2098603 | MS.gene61977:intron | 50.0% | |
| !! | AAAAGCGCCGGAATTACCAC+AGG | - | chr8.2:2098571-2098590 | MS.gene61977:intron | 50.0% |
| !! | CTGCTTCTGAAGCGTTAGAG+GGG | - | chr8.2:2099162-2099181 | MS.gene61977:CDS | 50.0% |
| !! | CTTGCTGCTTTGTGCAGGTA+CGG | - | chr8.2:2098299-2098318 | MS.gene61977:intron | 50.0% |
| !! | GATCATCAGCCCTTGGTGTT+TGG | + | chr8.2:2098014-2098033 | None:intergenic | 50.0% |
| !! | GCTGCTTCTGAAGCGTTAGA+GGG | - | chr8.2:2099161-2099180 | MS.gene61977:CDS | 50.0% |
| !! | TGCTGCTTCTGAAGCGTTAG+AGG | - | chr8.2:2099160-2099179 | MS.gene61977:CDS | 50.0% |
| ACACACGGATGACCAAGCAG+TGG | - | chr8.2:2098191-2098210 | MS.gene61977:intron | 55.0% | |
| ACCAGAGCAGGCTTTGCAAC+TGG | - | chr8.2:2097963-2097982 | MS.gene61977:intron | 55.0% | |
| ACCAGTTGCAAAGCCTGCTC+TGG | + | chr8.2:2097967-2097986 | None:intergenic | 55.0% | |
| AGAAACTGGAGGAGTAGCCG+CGG | + | chr8.2:2096897-2096916 | None:intergenic | 55.0% | |
| AGGGTCATAAGGTGGCACAG+AGG | + | chr8.2:2096960-2096979 | None:intergenic | 55.0% | |
| CACACGGATGACCAAGCAGT+GGG | - | chr8.2:2098192-2098211 | MS.gene61977:intron | 55.0% | |
| CGCGGGCCAATCTACTACTT+TGG | - | chr8.2:2097936-2097955 | MS.gene61977:intron | 55.0% | |
| CGGTGACTCAGCCATCTTGA+AGG | + | chr8.2:2096495-2096514 | None:intergenic | 55.0% | |
| CTCCGGTTAGGCGTTCAAGT+AGG | - | chr8.2:2098800-2098819 | MS.gene61977:intron | 55.0% | |
| GCTGGCGATCTAACCTTTGC+CGG | + | chr8.2:2096422-2096441 | None:intergenic | 55.0% | |
| GGAATTGTGGCCTAGGGGAT+AGG | + | chr8.2:2096994-2097013 | None:intergenic | 55.0% | |
| GGCCTCTTCTGACTACTCCA+TGG | - | chr8.2:2098605-2098624 | MS.gene61977:intron | 55.0% | |
| TCCAACACAGCATGAGACCC+TGG | + | chr8.2:2097334-2097353 | None:intergenic | 55.0% | |
| TCCAGGGTCTCATGCTGTGT+TGG | - | chr8.2:2097330-2097349 | MS.gene61977:intron | 55.0% | |
| TGCCACCAAGAAACCCAGCT+AGG | - | chr8.2:2099188-2099207 | MS.gene61977:CDS | 55.0% | |
| TTTATAGGGACGCGGCGAAG+AGG | - | chr8.2:2098768-2098787 | MS.gene61977:intron | 55.0% | |
| ! | CCAGCGTAGAGAAAAAGCGC+CGG | - | chr8.2:2098559-2098578 | MS.gene61977:intron | 55.0% |
| !! | AGAGTCTGAGGAAGCACTCG+CGG | - | chr8.2:2097918-2097937 | MS.gene61977:intron | 55.0% |
| !! | CTTCTGAAGCGTTAGAGGGG+TGG | - | chr8.2:2099165-2099184 | MS.gene61977:CDS | 55.0% |
| AGGCCAACGACTCTCTCCTG+TGG | + | chr8.2:2098590-2098609 | None:intergenic | 60.0% | |
| TAGGCTCGTTCCTCTCCGCA+AGG | + | chr8.2:2096529-2096548 | None:intergenic | 60.0% | |
| !! | GAGTCTGAGGAAGCACTCGC+GGG | - | chr8.2:2097919-2097938 | MS.gene61977:intron | 60.0% |
| !!! | CCGGCGCTTTTTCTCTACGC+TGG | + | chr8.2:2098562-2098581 | None:intergenic | 60.0% |
| ACTGGAGGAGTAGCCGCGGC+TGG | + | chr8.2:2096893-2096912 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 2096413 | 2100909 | 2096413 | ID=MS.gene61977 |
| chr8.2 | mRNA | 2096413 | 2100909 | 2096413 | ID=MS.gene61977.t1;Parent=MS.gene61977 |
| chr8.2 | exon | 2099007 | 2100909 | 2099007 | ID=MS.gene61977.t1.exon1;Parent=MS.gene61977.t1 |
| chr8.2 | CDS | 2099007 | 2100909 | 2099007 | ID=cds.MS.gene61977.t1;Parent=MS.gene61977.t1 |
| chr8.2 | exon | 2096413 | 2096444 | 2096413 | ID=MS.gene61977.t1.exon2;Parent=MS.gene61977.t1 |
| chr8.2 | CDS | 2096413 | 2096444 | 2096413 | ID=cds.MS.gene61977.t1;Parent=MS.gene61977.t1 |
| Gene Sequence |
| Protein sequence |
