Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57752.t1 | XP_013458136.1 | 98.9 | 457 | 5 | 0 | 1 | 457 | 1 | 457 | 4.70E-259 | 903.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57752.t1 | O80786 | 78.3 | 457 | 95 | 1 | 1 | 457 | 1 | 453 | 4.3e-205 | 715.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57752.t1 | A0A072UR54 | 98.9 | 457 | 5 | 0 | 1 | 457 | 1 | 457 | 3.4e-259 | 903.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049251 | MS.gene57752 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene049397 | MS.gene57752 | 0.872173 | 3.90E-67 | -1.69E-46 |
| MS.gene049596 | MS.gene57752 | 0.825374 | 4.85E-54 | -1.69E-46 |
| MS.gene049622 | MS.gene57752 | 0.819789 | 9.66E-53 | -1.69E-46 |
| MS.gene049660 | MS.gene57752 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene04985 | MS.gene57752 | 0.836517 | 8.93E-57 | -1.69E-46 |
| MS.gene049989 | MS.gene57752 | 0.900269 | 8.68E-78 | -1.69E-46 |
| MS.gene050297 | MS.gene57752 | 0.877873 | 4.43E-69 | -1.69E-46 |
| MS.gene05054 | MS.gene57752 | 0.805756 | 1.14E-49 | -1.69E-46 |
| MS.gene050648 | MS.gene57752 | 0.817679 | 2.91E-52 | -1.69E-46 |
| MS.gene051094 | MS.gene57752 | 0.804529 | 2.07E-49 | -1.69E-46 |
| MS.gene05124 | MS.gene57752 | 0.841976 | 3.43E-58 | -1.69E-46 |
| MS.gene051339 | MS.gene57752 | 0.806358 | 8.55E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene57752 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene051629 | MS.gene57752 | 0.831472 | 1.64E-55 | -1.69E-46 |
| MS.gene051742 | MS.gene57752 | 0.835621 | 1.51E-56 | -1.69E-46 |
| MS.gene051816 | MS.gene57752 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene051914 | MS.gene57752 | 0.81865 | 1.75E-52 | -1.69E-46 |
| MS.gene051955 | MS.gene57752 | 0.842683 | 2.23E-58 | -1.69E-46 |
| MS.gene052143 | MS.gene57752 | 0.823689 | 1.21E-53 | -1.69E-46 |
| MS.gene052308 | MS.gene57752 | 0.857487 | 1.58E-62 | -1.69E-46 |
| MS.gene052367 | MS.gene57752 | 0.901859 | 1.75E-78 | -1.69E-46 |
| MS.gene053173 | MS.gene57752 | 0.882765 | 7.92E-71 | -1.69E-46 |
| MS.gene053348 | MS.gene57752 | 0.850737 | 1.40E-60 | -1.69E-46 |
| MS.gene053416 | MS.gene57752 | 0.891645 | 3.29E-74 | -1.69E-46 |
| MS.gene053417 | MS.gene57752 | 0.891856 | 2.71E-74 | -1.69E-46 |
| MS.gene05369 | MS.gene57752 | 0.84983 | 2.51E-60 | -1.69E-46 |
| MS.gene054551 | MS.gene57752 | 0.872551 | 2.92E-67 | -1.69E-46 |
| MS.gene054552 | MS.gene57752 | 0.844404 | 7.72E-59 | -1.69E-46 |
| MS.gene054593 | MS.gene57752 | 0.875201 | 3.71E-68 | -1.69E-46 |
| MS.gene054633 | MS.gene57752 | 0.804634 | 1.97E-49 | -1.69E-46 |
| MS.gene054662 | MS.gene57752 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene054885 | MS.gene57752 | 0.845922 | 3.00E-59 | -1.69E-46 |
| MS.gene055308 | MS.gene57752 | 0.881422 | 2.43E-70 | -1.69E-46 |
| MS.gene055411 | MS.gene57752 | 0.819979 | 8.74E-53 | -1.69E-46 |
| MS.gene055578 | MS.gene57752 | 0.885615 | 6.98E-72 | -1.69E-46 |
| MS.gene055579 | MS.gene57752 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene055957 | MS.gene57752 | 0.881593 | 2.11E-70 | -1.69E-46 |
| MS.gene056041 | MS.gene57752 | 0.910967 | 1.03E-82 | -1.69E-46 |
| MS.gene056042 | MS.gene57752 | 0.82673 | 2.31E-54 | -1.69E-46 |
| MS.gene05640 | MS.gene57752 | 0.884298 | 2.16E-71 | -1.69E-46 |
| MS.gene056526 | MS.gene57752 | 0.870039 | 1.97E-66 | -1.69E-46 |
| MS.gene056528 | MS.gene57752 | 0.811024 | 8.61E-51 | -1.69E-46 |
| MS.gene05652 | MS.gene57752 | 0.80364 | 3.17E-49 | -1.69E-46 |
| MS.gene05732 | MS.gene57752 | 0.829803 | 4.19E-55 | -1.69E-46 |
| MS.gene057357 | MS.gene57752 | 0.803427 | 3.50E-49 | -1.69E-46 |
| MS.gene057358 | MS.gene57752 | 0.812209 | 4.76E-51 | -1.69E-46 |
| MS.gene057367 | MS.gene57752 | 0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene057458 | MS.gene57752 | 0.881654 | 2.01E-70 | -1.69E-46 |
| MS.gene057483 | MS.gene57752 | 0.819432 | 1.17E-52 | -1.69E-46 |
| MS.gene058128 | MS.gene57752 | 0.813259 | 2.80E-51 | -1.69E-46 |
| MS.gene058196 | MS.gene57752 | 0.817251 | 3.63E-52 | -1.69E-46 |
| MS.gene058818 | MS.gene57752 | 0.838338 | 3.05E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene57752 | 0.829181 | 5.94E-55 | -1.69E-46 |
| MS.gene058844 | MS.gene57752 | 0.80607 | 9.83E-50 | -1.69E-46 |
| MS.gene058849 | MS.gene57752 | 0.826593 | 2.49E-54 | -1.69E-46 |
| MS.gene058853 | MS.gene57752 | 0.833147 | 6.30E-56 | -1.69E-46 |
| MS.gene059300 | MS.gene57752 | 0.843472 | 1.37E-58 | -1.69E-46 |
| MS.gene059553 | MS.gene57752 | 0.855535 | 5.91E-62 | -1.69E-46 |
| MS.gene060473 | MS.gene57752 | 0.90766 | 3.99E-81 | -1.69E-46 |
| MS.gene060565 | MS.gene57752 | 0.901917 | 1.65E-78 | -1.69E-46 |
| MS.gene06057 | MS.gene57752 | 0.836983 | 6.80E-57 | -1.69E-46 |
| MS.gene06093 | MS.gene57752 | 0.902462 | 9.46E-79 | -1.69E-46 |
| MS.gene061099 | MS.gene57752 | 0.85961 | 3.67E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene57752 | 0.928651 | 2.14E-92 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57752.t1 | MTR_4g116870 | 98.906 | 457 | 5 | 0 | 1 | 457 | 1 | 457 | 0.0 | 946 |
| MS.gene57752.t1 | MTR_4g071090 | 33.578 | 408 | 232 | 9 | 68 | 457 | 172 | 558 | 7.09e-59 | 207 |
| MS.gene57752.t1 | MTR_4g122270 | 32.719 | 434 | 257 | 7 | 35 | 457 | 216 | 625 | 2.17e-58 | 207 |
| MS.gene57752.t1 | MTR_4g096700 | 33.661 | 407 | 233 | 11 | 61 | 457 | 38 | 417 | 1.71e-54 | 194 |
| MS.gene57752.t1 | MTR_8g090000 | 28.085 | 470 | 269 | 9 | 39 | 457 | 20 | 471 | 8.26e-54 | 193 |
| MS.gene57752.t1 | MTR_7g109480 | 34.985 | 343 | 197 | 5 | 124 | 457 | 131 | 456 | 9.35e-54 | 191 |
| MS.gene57752.t1 | MTR_2g437540 | 27.682 | 466 | 279 | 10 | 38 | 457 | 20 | 473 | 2.02e-52 | 189 |
| MS.gene57752.t1 | MTR_7g100680 | 32.507 | 363 | 203 | 11 | 118 | 451 | 124 | 473 | 1.51e-44 | 166 |
| MS.gene57752.t1 | MTR_2g009190 | 31.250 | 416 | 255 | 11 | 57 | 457 | 34 | 433 | 9.88e-42 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57752.t1 | AT2G07690 | 78.337 | 457 | 95 | 1 | 1 | 457 | 1 | 453 | 0.0 | 749 |
| MS.gene57752.t1 | AT2G07690 | 77.899 | 457 | 95 | 2 | 1 | 457 | 1 | 451 | 0.0 | 740 |
| MS.gene57752.t1 | AT2G16440 | 29.638 | 442 | 274 | 7 | 35 | 457 | 140 | 563 | 1.97e-58 | 206 |
| MS.gene57752.t1 | AT1G44900 | 32.251 | 431 | 263 | 7 | 35 | 457 | 216 | 625 | 2.37e-58 | 207 |
| MS.gene57752.t1 | AT1G44900 | 32.251 | 431 | 263 | 7 | 35 | 457 | 218 | 627 | 2.44e-58 | 207 |
| MS.gene57752.t1 | AT4G02060 | 31.042 | 451 | 268 | 10 | 40 | 457 | 14 | 454 | 1.76e-55 | 196 |
| MS.gene57752.t1 | AT4G02060 | 31.042 | 451 | 268 | 10 | 40 | 457 | 14 | 454 | 1.76e-55 | 196 |
| MS.gene57752.t1 | AT5G46280 | 30.695 | 417 | 242 | 9 | 57 | 457 | 28 | 413 | 6.16e-55 | 192 |
| MS.gene57752.t1 | AT5G46280 | 31.175 | 417 | 240 | 10 | 57 | 457 | 28 | 413 | 1.07e-54 | 192 |
| MS.gene57752.t1 | AT5G46280 | 31.175 | 417 | 240 | 10 | 57 | 457 | 28 | 413 | 2.57e-54 | 192 |
| MS.gene57752.t1 | AT5G46280 | 31.175 | 417 | 240 | 10 | 57 | 457 | 28 | 413 | 4.61e-54 | 193 |
| MS.gene57752.t1 | AT5G44635 | 27.907 | 473 | 268 | 10 | 39 | 457 | 20 | 473 | 9.93e-54 | 193 |
| MS.gene57752.t1 | AT5G44635 | 27.907 | 473 | 268 | 10 | 39 | 457 | 20 | 473 | 1.07e-53 | 193 |
| MS.gene57752.t1 | AT3G09660 | 31.980 | 394 | 227 | 11 | 84 | 451 | 97 | 475 | 3.17e-51 | 185 |
| MS.gene57752.t1 | AT3G09660 | 31.980 | 394 | 227 | 11 | 84 | 451 | 97 | 475 | 5.18e-51 | 185 |
| MS.gene57752.t1 | AT3G09660 | 31.980 | 394 | 227 | 11 | 84 | 451 | 97 | 475 | 5.33e-51 | 185 |
| MS.gene57752.t1 | AT2G14050 | 33.542 | 319 | 187 | 7 | 149 | 457 | 131 | 434 | 7.45e-39 | 149 |
| MS.gene57752.t1 | AT2G14050 | 33.542 | 319 | 187 | 7 | 149 | 457 | 131 | 434 | 7.61e-39 | 149 |
Find 0 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATTATTTTTAAACCT+AGG | - | 32401:2708-2727 | MS.gene57752:CDS | 10.0% |
| !!! | TTATTTTCACAAATTATTAT+TGG | - | 32401:1318-1337 | MS.gene57752:intron | 10.0% |
| !!! | ATTTTTAAACCAACTTTATT+AGG | - | 32401:2594-2613 | MS.gene57752:intron | 15.0% |
| !!! | TGGAAAAATAATTACATTTT+TGG | + | 32401:3268-3287 | MS.gene57752:intergenic | 15.0% |
| !! | AATCTAAGCATTATTATATG+TGG | + | 32401:3291-3310 | MS.gene57752:intergenic | 20.0% |
| !! | ATATGTAAGAATTGTAAGAA+GGG | - | 32401:1735-1754 | MS.gene57752:intron | 20.0% |
| !! | TATACATTTGATATGACAAA+AGG | - | 32401:2041-2060 | MS.gene57752:CDS | 20.0% |
| !!! | CTTATTTAATTTTGAGCATT+TGG | - | 32401:1541-1560 | MS.gene57752:intron | 20.0% |
| !!! | GGTTTAAAAATTTAGTTTCA+CGG | + | 32401:2585-2604 | MS.gene57752:intergenic | 20.0% |
| !!! | GTTTAAAAATTTAGTTTCAC+GGG | + | 32401:2584-2603 | MS.gene57752:intergenic | 20.0% |
| !!! | TATCTTTTTATCATTTTCGT+AGG | - | 32401:1626-1645 | MS.gene57752:CDS | 20.0% |
| !!! | TCTATTTTTACAATTTAGCT+TGG | - | 32401:3341-3360 | MS.gene57752:CDS | 20.0% |
| ! | AAATATCCAAACTTTCAACA+TGG | - | 32401:2979-2998 | MS.gene57752:intron | 25.0% |
| ! | AAATCAACAAATTCATCAAC+TGG | + | 32401:974-993 | MS.gene57752:intergenic | 25.0% |
| ! | ATATCAACGAGAAGATATTT+GGG | + | 32401:851-870 | MS.gene57752:intergenic | 25.0% |
| ! | CTTACAATTCTTACATATCA+AGG | + | 32401:1733-1752 | MS.gene57752:intergenic | 25.0% |
| ! | GATATGTAAGAATTGTAAGA+AGG | - | 32401:1734-1753 | MS.gene57752:intron | 25.0% |
| ! | TATGTAAGAATTGTAAGAAG+GGG | - | 32401:1736-1755 | MS.gene57752:intron | 25.0% |
| ! | TGTGTTTATGAAGTTGTTTA+GGG | - | 32401:1195-1214 | MS.gene57752:intron | 25.0% |
| ! | TTGTGTTTATGAAGTTGTTT+AGG | - | 32401:1194-1213 | MS.gene57752:intron | 25.0% |
| !! | CTTTGGTAATTTATCATTGT+TGG | - | 32401:3751-3770 | MS.gene57752:CDS | 25.0% |
| !! | GGATGAATTCTTTGAATTTT+TGG | + | 32401:772-791 | MS.gene57752:intergenic | 25.0% |
| !! | TGAATACTCATGTATTTTGT+TGG | - | 32401:2956-2975 | MS.gene57752:intron | 25.0% |
| !! | TGGAATCTATAGTATTTTTC+AGG | - | 32401:2211-2230 | MS.gene57752:intron | 25.0% |
| !! | TTCACTGTATCTTTTATGTA+GGG | - | 32401:3787-3806 | MS.gene57752:CDS | 25.0% |
| !! | TTTCACTGTATCTTTTATGT+AGG | - | 32401:3786-3805 | MS.gene57752:CDS | 25.0% |
| !!! | ATTTTTACAATTTAGCTTGG+CGG | - | 32401:3344-3363 | MS.gene57752:CDS | 25.0% |
| !!! | TGAATTCTTTGAATTTTTGG+AGG | + | 32401:769-788 | MS.gene57752:intergenic | 25.0% |
| !!! | TTCTTTATTTTGCGTTTTTG+AGG | - | 32401:1876-1895 | MS.gene57752:intron | 25.0% |
| !!! | TTTGCATTTTTCCTTTAGAA+TGG | - | 32401:3186-3205 | MS.gene57752:intron | 25.0% |
| !!! | TTTTTTGTAGTTTGAAACTG+CGG | - | 32401:1019-1038 | MS.gene57752:CDS | 25.0% |
| AACCATTTCTTGTTACTCTT+TGG | - | 32401:3734-3753 | MS.gene57752:CDS | 30.0% | |
| AATTACCAGAGGAAGAATAT+CGG | + | 32401:930-949 | MS.gene57752:intergenic | 30.0% | |
| ACTTAATGCATTGTTTGCAT+TGG | - | 32401:3561-3580 | MS.gene57752:CDS | 30.0% | |
| AGTTTAGAAGAAATTACCAG+AGG | + | 32401:941-960 | MS.gene57752:intergenic | 30.0% | |
| ATTATTGAAACTCAAGTGCT+TGG | - | 32401:1411-1430 | MS.gene57752:CDS | 30.0% | |
| CAAATATCTTCTCGTTGATA+TGG | - | 32401:850-869 | MS.gene57752:intron | 30.0% | |
| CAAATGTATATTACTACCTC+CGG | + | 32401:2031-2050 | MS.gene57752:intergenic | 30.0% | |
| CACTGATAACCTAATAAAGT+TGG | + | 32401:2606-2625 | MS.gene57752:intergenic | 30.0% | |
| CAGATATCAAGTATCTCAAT+TGG | + | 32401:1231-1250 | MS.gene57752:intergenic | 30.0% | |
| CAGCTAAAACGTGATATTAA+AGG | + | 32401:2535-2554 | MS.gene57752:intergenic | 30.0% | |
| CATATCAACGAGAAGATATT+TGG | + | 32401:852-871 | MS.gene57752:intergenic | 30.0% | |
| CTAAAACGTGATATTAAAGG+AGG | + | 32401:2532-2551 | MS.gene57752:intergenic | 30.0% | |
| CTAAGCATTATTATATGTGG+TGG | + | 32401:3288-3307 | MS.gene57752:intergenic | 30.0% | |
| GATGTCTCTTACATGATAAA+AGG | - | 32401:1898-1917 | MS.gene57752:intron | 30.0% | |
| GCAAACAATGCATTAAGTAA+AGG | + | 32401:3559-3578 | MS.gene57752:intergenic | 30.0% | |
| TAACCAAAGAACCATTCTAA+AGG | + | 32401:3200-3219 | MS.gene57752:intergenic | 30.0% | |
| TAACTAAAGAACCAGTCTAA+AGG | + | 32401:3136-3155 | MS.gene57752:intergenic | 30.0% | |
| TAATCATGACATCTTTATGC+TGG | - | 32401:2084-2103 | MS.gene57752:CDS | 30.0% | |
| TACCAAAGAGTAACAAGAAA+TGG | + | 32401:3739-3758 | MS.gene57752:intergenic | 30.0% | |
| TACTTTGCTTTATACCTTGT+TGG | - | 32401:2503-2522 | MS.gene57752:CDS | 30.0% | |
| TAGAACTGAGAAATCATAGA+CGG | + | 32401:2666-2685 | MS.gene57752:intergenic | 30.0% | |
| TATTGACATCAACTGTAGAT+TGG | + | 32401:2325-2344 | MS.gene57752:intergenic | 30.0% | |
| TCAAGAGATTGGTATATTTG+AGG | - | 32401:1588-1607 | MS.gene57752:CDS | 30.0% | |
| TCAGATTCTTCTTACTTCTA+AGG | - | 32401:1121-1140 | MS.gene57752:intron | 30.0% | |
| TTATTGAAACTCAAGTGCTT+GGG | - | 32401:1412-1431 | MS.gene57752:CDS | 30.0% | |
| TTGTCTTTCTTTCAAGAGAT+TGG | - | 32401:1577-1596 | MS.gene57752:CDS | 30.0% | |
| ! | AGCATAATCAACTTGTTTCA+TGG | + | 32401:1464-1483 | MS.gene57752:intergenic | 30.0% |
| ! | CAAAGTAGTCAATTGATAGT+TGG | + | 32401:2490-2509 | MS.gene57752:intergenic | 30.0% |
| ! | CACACTTCAATTAAAAGTGT+CGG | + | 32401:1259-1278 | MS.gene57752:intergenic | 30.0% |
| ! | TTTGCAATTTTCCTTTAGAC+TGG | - | 32401:3122-3141 | MS.gene57752:intron | 30.0% |
| !! | ACTTTTAATTGAAGTGTGAC+CGG | - | 32401:1261-1280 | MS.gene57752:intron | 30.0% |
| !! | ATATCAATGTGTTACTTCTC+GGG | - | 32401:3067-3086 | MS.gene57752:intron | 30.0% |
| !! | GATATCAATGTGTTACTTCT+CGG | - | 32401:3066-3085 | MS.gene57752:intron | 30.0% |
| !! | TTCTTTGAATTTTTGGAGGA+TGG | + | 32401:765-784 | MS.gene57752:intergenic | 30.0% |
| !! | TTTCCTTTAGAATGGTTCTT+TGG | - | 32401:3194-3213 | MS.gene57752:intron | 30.0% |
| !!! | AAGGTTTTTTTTTTGTAGCC+TGG | - | 32401:1917-1936 | MS.gene57752:intron | 30.0% |
| AAATATAGACGGAGCAATCT+TGG | + | 32401:2864-2883 | MS.gene57751:intergenic | 35.0% | |
| AACTGTAAAATGTAACCGTC+AGG | + | 32401:3427-3446 | MS.gene57752:intergenic | 35.0% | |
| AAGATACCATTATTAGCACC+AGG | + | 32401:2780-2799 | MS.gene57752:intergenic | 35.0% | |
| AAGATTGCTCCGTCTATATT+TGG | - | 32401:2863-2882 | MS.gene57752:intron | 35.0% | |
| ATAAGATGAGACCAGAAGAT+AGG | - | 32401:3705-3724 | MS.gene57752:CDS | 35.0% | |
| ATCAACATACTTGCTCTTGT+CGG | + | 32401:1981-2000 | MS.gene57752:intergenic | 35.0% | |
| ATTCCTACAACCCTGATATA+AGG | + | 32401:2401-2420 | MS.gene57752:intergenic | 35.0% | |
| CTACGATGCGAATGAAATAA+TGG | + | 32401:3385-3404 | MS.gene57752:intergenic | 35.0% | |
| CTTGAAGTTGCAAGAAAATC+CGG | - | 32401:2009-2028 | MS.gene57752:CDS | 35.0% | |
| GATGAGGAATATGTAACAGT+AGG | + | 32401:2747-2766 | MS.gene57752:intergenic | 35.0% | |
| GTAAGGAAAGACATTGTTAC+CGG | + | 32401:807-826 | MS.gene57752:intergenic | 35.0% | |
| GTGAATGTTAACAGTGTTTG+TGG | - | 32401:2556-2575 | MS.gene57752:intron | 35.0% | |
| TAGGAATGAAAATTCAGCCT+AGG | + | 32401:2728-2747 | MS.gene57752:intergenic | 35.0% | |
| TATTGAAACTCAAGTGCTTG+GGG | - | 32401:1413-1432 | MS.gene57752:CDS | 35.0% | |
| TCATCATGGCCAAATATAGA+CGG | + | 32401:2875-2894 | MS.gene57752:intergenic | 35.0% | |
| TCTTCATTTGTAAACGCAGT+GGG | + | 32401:2455-2474 | MS.gene57752:intergenic | 35.0% | |
| TTCTTCATTTGTAAACGCAG+TGG | + | 32401:2456-2475 | MS.gene57752:intergenic | 35.0% | |
| TTGAACAAGATGTCGATCAA+CGG | + | 32401:2159-2178 | MS.gene57752:intergenic | 35.0% | |
| ! | AGACGGTATCTAGTATTGAA+AGG | + | 32401:2649-2668 | MS.gene57752:intergenic | 35.0% |
| ! | AGATATTTGCTAGTTGCAAC+AGG | - | 32401:1507-1526 | MS.gene57752:intron | 35.0% |
| ! | AGTTAGACAGCCTTATATCA+GGG | - | 32401:2388-2407 | MS.gene57752:intron | 35.0% |
| ! | CCAGAAGTATAAACAGCAAT+AGG | + | 32401:3475-3494 | MS.gene57752:intergenic | 35.0% |
| ! | GATATTTGGGATTGTGAAGA+AGG | + | 32401:838-857 | MS.gene57752:intergenic | 35.0% |
| ! | GATTCTTCTTACTTCTAAGG+AGG | - | 32401:1124-1143 | MS.gene57752:intron | 35.0% |
| ! | GCTGTTTATACTTCTGGAAA+AGG | - | 32401:3478-3497 | MS.gene57752:intron | 35.0% |
| ! | TAGCCTTTTTGACATCATCA+TGG | + | 32401:2889-2908 | MS.gene57752:intergenic | 35.0% |
| ! | TGATGATGTCAAAAAGGCTA+TGG | - | 32401:2889-2908 | MS.gene57752:intron | 35.0% |
| ! | TGTGTTTTATGCAGCAACAA+AGG | - | 32401:2356-2375 | MS.gene57752:intron | 35.0% |
| !! | ACATTTTTGGATACCACAAG+TGG | + | 32401:3255-3274 | MS.gene57752:intergenic | 35.0% |
| !! | ACTTCAATTAAAAGTGTCGG+TGG | + | 32401:1256-1275 | MS.gene57752:intergenic | 35.0% |
| !! | CCTATTGCTGTTTATACTTC+TGG | - | 32401:3472-3491 | MS.gene57752:intron | 35.0% |
| !! | CGAAGCTTGTTAAAATTGCT+GGG | - | 32401:1661-1680 | MS.gene57752:intron | 35.0% |
| !! | TATCAATGTGTTACTTCTCG+GGG | - | 32401:3068-3087 | MS.gene57752:intron | 35.0% |
| !! | TCGAAGCTTGTTAAAATTGC+TGG | - | 32401:1660-1679 | MS.gene57752:intron | 35.0% |
| !! | TGTTACCGGTTTCAAAGTTA+CGG | + | 32401:793-812 | MS.gene57752:intergenic | 35.0% |
| !! | TTAAAAACAAGTGCCACTTG+TGG | - | 32401:3239-3258 | MS.gene57752:intron | 35.0% |
| !! | TTCATCCGTAACTTTGAAAC+CGG | - | 32401:785-804 | MS.gene57752:CDS | 35.0% |
| !!! | ATCTTTATGCTGGCTTTTGA+AGG | - | 32401:2094-2113 | MS.gene57752:CDS | 35.0% |
| !!! | GTCTTTTGCTTATTTTGCAG+TGG | - | 32401:1842-1861 | MS.gene57752:intron | 35.0% |
| AACAATAAGCCACGGATCAA+TGG | + | 32401:1957-1976 | MS.gene57751:intergenic | 40.0% | |
| AACTCACGATGTAGAAGAGT+TGG | + | 32401:2240-2259 | MS.gene57752:intergenic | 40.0% | |
| AATACTATGAAGCCCACACA+TGG | + | 32401:1364-1383 | MS.gene57752:intergenic | 40.0% | |
| ACAATAAGCCACGGATCAAT+GGG | + | 32401:1956-1975 | MS.gene57752:intergenic | 40.0% | |
| ACGATTGTTAATCTTGAGCC+AGG | + | 32401:2191-2210 | MS.gene57752:intergenic | 40.0% | |
| ACGGATAGAAGCAAGTTTCT+AGG | + | 32401:2140-2159 | MS.gene57752:intergenic | 40.0% | |
| AGAAGAATCTGAACATCACC+AGG | + | 32401:1113-1132 | MS.gene57752:intergenic | 40.0% | |
| AGGGTTGTAGGAATAGAAGA+TGG | - | 32401:2407-2426 | MS.gene57752:intron | 40.0% | |
| ATGAAGTTGTTTAGGGAGCT+AGG | - | 32401:1202-1221 | MS.gene57752:intron | 40.0% | |
| ATTCTCAATCAAGATACGCG+AGG | + | 32401:3587-3606 | MS.gene57752:intergenic | 40.0% | |
| GGAGTTTAGAAGGAAGATCA+GGG | + | 32401:895-914 | MS.gene57752:intergenic | 40.0% | |
| GGCTCAAGATTAACAATCGT+TGG | - | 32401:2191-2210 | MS.gene57752:intron | 40.0% | |
| TCAACATACTTGCTCTTGTC+GGG | + | 32401:1980-1999 | MS.gene57752:intergenic | 40.0% | |
| TGAAGAAGGCTTTCTCTGTA+AGG | + | 32401:824-843 | MS.gene57752:intergenic | 40.0% | |
| TGAAGTTGTTTAGGGAGCTA+GGG | - | 32401:1203-1222 | MS.gene57752:intron | 40.0% | |
| TGGTTTACACACCTATCTTC+TGG | + | 32401:3719-3738 | MS.gene57752:intergenic | 40.0% | |
| TTCATGTGATCATGTTCCTC+AGG | - | 32401:1806-1825 | MS.gene57752:intron | 40.0% | |
| TTTATTTGGAGGGTCGAGAA+AGG | - | 32401:2919-2938 | MS.gene57752:intron | 40.0% | |
| TTTGGTGAGTTTGAAGACGA+AGG | - | 32401:1052-1071 | MS.gene57752:intron | 40.0% | |
| TTTGTCTTGTGTCCATGTGT+GGG | - | 32401:1349-1368 | MS.gene57752:intron | 40.0% | |
| ! | CAGTTAGACAGCCTTATATC+AGG | - | 32401:2387-2406 | MS.gene57752:intron | 40.0% |
| ! | CGGATTTTCTTGCAACTTCA+AGG | + | 32401:2011-2030 | MS.gene57752:intergenic | 40.0% |
| ! | GATGTTCCTGGTGCTAATAA+TGG | - | 32401:2771-2790 | MS.gene57752:CDS | 40.0% |
| ! | GCTATGGCCTGTCTTTTATT+TGG | - | 32401:2905-2924 | MS.gene57752:intron | 40.0% |
| ! | TGGCCATGATGATGTCAAAA+AGG | - | 32401:2883-2902 | MS.gene57752:intron | 40.0% |
| ! | TTTGTAGTTTGAAACTGCGG+CGG | - | 32401:1022-1041 | MS.gene57752:intron | 40.0% |
| !! | ATGGCCTGTCTTTTATTTGG+AGG | - | 32401:2908-2927 | MS.gene57752:intron | 40.0% |
| !! | TGAATTTTTGGAGGATGGTG+TGG | + | 32401:760-779 | MS.gene57752:intergenic | 40.0% |
| !! | TGGCCTGTCTTTTATTTGGA+GGG | - | 32401:2909-2928 | MS.gene57752:intron | 40.0% |
| AATTGCTGCATCGAGGACTA+AGG | - | 32401:1689-1708 | MS.gene57752:intron | 45.0% | |
| ACCAGGAACATCTACAGATG+AGG | + | 32401:2763-2782 | MS.gene57752:intergenic | 45.0% | |
| ACCTGTGACTTTGCAGTAGA+TGG | + | 32401:3096-3115 | MS.gene57752:intergenic | 45.0% | |
| AGTTTGAAGACGAAGGTTGC+TGG | - | 32401:1059-1078 | MS.gene57752:intron | 45.0% | |
| ATGTAACCGTCAGGCAATGT+AGG | + | 32401:3418-3437 | MS.gene57752:intergenic | 45.0% | |
| ATTAAAGGAGGCAGCCAACA+AGG | + | 32401:2520-2539 | MS.gene57752:intergenic | 45.0% | |
| CAACATGGCTGCTGATCATA+TGG | - | 32401:2994-3013 | MS.gene57752:intron | 45.0% | |
| CAGCAGCCATGTTGAAAGTT+TGG | + | 32401:2988-3007 | MS.gene57752:intergenic | 45.0% | |
| CATTTCCCTACATTGCCTGA+CGG | - | 32401:3409-3428 | MS.gene57752:CDS | 45.0% | |
| CGACCCTCCAAATAAAAGAC+AGG | + | 32401:2915-2934 | MS.gene57752:intergenic | 45.0% | |
| CGGAGTTTAGAAGGAAGATC+AGG | + | 32401:896-915 | MS.gene57752:intergenic | 45.0% | |
| CTGTTTCGATGAGATCGCTT+GGG | - | 32401:1150-1169 | MS.gene57752:intron | 45.0% | |
| CTTGTTCAAACTGTAGTGCC+TGG | - | 32401:2170-2189 | MS.gene57752:intron | 45.0% | |
| GAAGTTGCAAGAAAATCCGG+AGG | - | 32401:2012-2031 | MS.gene57752:CDS | 45.0% | |
| GACAGCACAAACTAAACCTG+AGG | + | 32401:1825-1844 | MS.gene57752:intergenic | 45.0% | |
| GCTGCTATCTTGGATTACAG+AGG | + | 32401:3527-3546 | MS.gene57752:intergenic | 45.0% | |
| GGAACATGATCACATGAACG+TGG | + | 32401:1804-1823 | MS.gene57752:intergenic | 45.0% | |
| GGATAACAATTGCTGCATCG+AGG | - | 32401:1682-1701 | MS.gene57752:intron | 45.0% | |
| GTTTGTCTTGTGTCCATGTG+TGG | - | 32401:1348-1367 | MS.gene57752:intron | 45.0% | |
| TCACGATGTAGAAGAGTTGG+AGG | + | 32401:2237-2256 | MS.gene57752:intergenic | 45.0% | |
| TCCATCTACTGCAAAGTCAC+AGG | - | 32401:3092-3111 | MS.gene57752:intron | 45.0% | |
| TCCTCATCTGTAGATGTTCC+TGG | - | 32401:2759-2778 | MS.gene57752:CDS | 45.0% | |
| TCTGTTTCGATGAGATCGCT+TGG | - | 32401:1149-1168 | MS.gene57752:intron | 45.0% | |
| TGCTGGAGATACTGGTGATA+TGG | - | 32401:1076-1095 | MS.gene57752:intron | 45.0% | |
| TGTAACCGTCAGGCAATGTA+GGG | + | 32401:3417-3436 | MS.gene57752:intergenic | 45.0% | |
| TGTTTCGATGAGATCGCTTG+GGG | - | 32401:1151-1170 | MS.gene57752:intron | 45.0% | |
| TTATCTTGAAGGAGGAGCCA+TGG | - | 32401:3643-3662 | MS.gene57752:CDS | 45.0% | |
| TTGTCGGGAACAATAAGCCA+CGG | + | 32401:1965-1984 | MS.gene57752:intergenic | 45.0% | |
| ! | CAGCCTTATATCAGGGTTGT+AGG | - | 32401:2395-2414 | MS.gene57752:intron | 45.0% |
| ! | GACTTACAGTGCTGCTATCT+TGG | + | 32401:3537-3556 | MS.gene57752:intergenic | 45.0% |
| ! | TTTCTAGGAAGCTCTCCAGT+TGG | + | 32401:2125-2144 | MS.gene57752:intergenic | 45.0% |
| !! | ATGCTGACTCTCGAATGCTT+AGG | - | 32401:1479-1498 | MS.gene57752:intron | 45.0% |
| !! | CAGCGCGAGTTTTATCTTGA+AGG | - | 32401:3632-3651 | MS.gene57752:CDS | 45.0% |
| !! | CGCGAGTTTTATCTTGAAGG+AGG | - | 32401:3635-3654 | MS.gene57752:CDS | 45.0% |
| !! | CTTTTGAAGGACGTTCCAAC+TGG | - | 32401:2107-2126 | MS.gene57752:intron | 45.0% |
| !! | TTTTTGGAGGATGGTGTGGT+TGG | + | 32401:756-775 | MS.gene57752:intergenic | 45.0% |
| AACCTTGTCCCATTGATCCG+TGG | - | 32401:1945-1964 | MS.gene57752:intron | 50.0% | |
| ACCAGAGGAAGAATATCGGC+AGG | + | 32401:926-945 | MS.gene57752:intergenic | 50.0% | |
| ACGAAGGTTGCTGGAGATAC+TGG | - | 32401:1068-1087 | MS.gene57752:intron | 50.0% | |
| ATGGGACAAGGTTCTTCTCC+AGG | + | 32401:1938-1957 | MS.gene57752:intergenic | 50.0% | |
| CAAGCAGCATTTGCCAGATG+GGG | - | 32401:3029-3048 | MS.gene57752:intron | 50.0% | |
| CCAGATGGGGTGAGATTAAG+AGG | - | 32401:3042-3061 | MS.gene57752:intron | 50.0% | |
| CCTCTTAATCTCACCCCATC+TGG | + | 32401:3045-3064 | MS.gene57752:intergenic | 50.0% | |
| CTTGGATTACAGAGGCTGTG+AGG | + | 32401:3519-3538 | MS.gene57752:intergenic | 50.0% | |
| GAATATCGGCAGGAGCAGAT+CGG | + | 32401:916-935 | MS.gene57752:intergenic | 50.0% | |
| GATATGGAAGATGCTGCTCC+TGG | - | 32401:1092-1111 | MS.gene57752:intron | 50.0% | |
| GCAAGCAGCATTTGCCAGAT+GGG | - | 32401:3028-3047 | MS.gene57752:intron | 50.0% | |
| GGAAAAGGATCATCAGCTGC+TGG | - | 32401:3493-3512 | MS.gene57752:intron | 50.0% | |
| GGAAATGAAGCCAAGTCTCG+AGG | - | 32401:2428-2447 | MS.gene57752:intron | 50.0% | |
| GGAGCAGATCGGAGTTTAGA+AGG | + | 32401:905-924 | MS.gene57752:intergenic | 50.0% | |
| TCACATGTGTCGTGTCAGAC+CGG | + | 32401:1283-1302 | MS.gene57752:intergenic | 50.0% | |
| TCCTGCCGATATTCTTCCTC+TGG | - | 32401:922-941 | MS.gene57752:intron | 50.0% | |
| TGCAAGCAGCATTTGCCAGA+TGG | - | 32401:3027-3046 | MS.gene57752:intron | 50.0% | |
| ! | TCTGGCAAATGCTGCTTGCA+AGG | + | 32401:3027-3046 | MS.gene57752:intergenic | 50.0% |
| ACAGCGACCAAGCACACTCA+TGG | - | 32401:693-712 | MS.gene57752:intron | 55.0% | |
| ACCTCCATCTGCCAAGACCA+TGG | + | 32401:3663-3682 | MS.gene57752:intergenic | 55.0% | |
| AGCCACGGATCAATGGGACA+AGG | + | 32401:1950-1969 | MS.gene57752:intergenic | 55.0% | |
| AGGGGAAGCAAGTTCCGTGT+CGG | - | 32401:1754-1773 | MS.gene57752:intron | 55.0% | |
| CAAGCACACTCATGGGACGA+CGG | - | 32401:701-720 | MS.gene57752:intron | 55.0% | |
| CAGCGACCAAGCACACTCAT+GGG | - | 32401:694-713 | MS.gene57752:intron | 55.0% | |
| GAGGATGGTGTGGTTGGAGA+TGG | + | 32401:750-769 | MS.gene57752:intergenic | 55.0% | |
| GATGGTGTGGTTGGAGATGG+TGG | + | 32401:747-766 | MS.gene57752:intergenic | 55.0% | |
| TGAAGGAGGAGCCATGGTCT+TGG | - | 32401:3649-3668 | MS.gene57752:CDS | 55.0% | |
| ! | GTGGTTGGAGATGGTGGCAT+CGG | + | 32401:741-760 | MS.gene57752:intergenic | 55.0% |
| !! | ATGTCAGGTTGGGACGAAGG+AGG | - | 32401:662-681 | MS.gene57752:intron | 55.0% |
| ACAACTGCTCCCCCAAGTCC+TGG | + | 32401:1780-1799 | MS.gene57752:intergenic | 60.0% | |
| CGTCGTCCCATGAGTGTGCT+TGG | + | 32401:703-722 | MS.gene57752:intergenic | 60.0% | |
| ! | AAGCAAGTTCCGTGTCGGCC+AGG | - | 32401:1759-1778 | MS.gene57752:intron | 60.0% |
| ! | GCCATGGTCTTGGCAGATGG+AGG | - | 32401:3659-3678 | MS.gene57752:CDS | 60.0% |
| ! | GGAGCCATGGTCTTGGCAGA+TGG | - | 32401:3656-3675 | MS.gene57752:CDS | 60.0% |
| ! | TTCCGTGTCGGCCAGGACTT+GGG | - | 32401:1766-1785 | MS.gene57752:intron | 60.0% |
| CGCAGTGGGACCTCGAGACT+TGG | + | 32401:2441-2460 | MS.gene57752:intergenic | 65.0% | |
| ! | AACTGCGGCGGCGCAGGTTT+TGG | - | 32401:1034-1053 | MS.gene57752:intron | 65.0% |
| ! | GTTCCGTGTCGGCCAGGACT+TGG | - | 32401:1765-1784 | MS.gene57752:intron | 65.0% |
| ! | GTTTGAAACTGCGGCGGCGC+AGG | - | 32401:1028-1047 | MS.gene57752:intron | 65.0% |
| ! | TCCGTGTCGGCCAGGACTTG+GGG | - | 32401:1767-1786 | MS.gene57752:intron | 65.0% |
| !! | TGGCATCGGTTTCGCCGCCA+CGG | + | 32401:727-746 | MS.gene57752:intergenic | 65.0% |
| CACTCATGGGACGACGGCCG+TGG | - | 32401:707-726 | MS.gene57752:intron | 70.0% | |
| CCCCCAAGTCCTGGCCGACA+CGG | + | 32401:1771-1790 | MS.gene57752:intergenic | 70.0% | |
| TCATGGGACGACGGCCGTGG+CGG | - | 32401:710-729 | MS.gene57752:intron | 70.0% | |
| ! | CCGTGTCGGCCAGGACTTGG+GGG | - | 32401:1768-1787 | MS.gene57752:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32401 | gene | 662 | 3822 | 662 | ID=MS.gene57752 |
| 32401 | mRNA | 662 | 3822 | 662 | ID=MS.gene57752.t1;Parent=MS.gene57752 |
| 32401 | exon | 3541 | 3822 | 3541 | ID=MS.gene57752.t1.exon1;Parent=MS.gene57752.t1 |
| 32401 | CDS | 3541 | 3822 | 3541 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 3312 | 3455 | 3312 | ID=MS.gene57752.t1.exon2;Parent=MS.gene57752.t1 |
| 32401 | CDS | 3312 | 3455 | 3312 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 2657 | 2836 | 2657 | ID=MS.gene57752.t1.exon3;Parent=MS.gene57752.t1 |
| 32401 | CDS | 2657 | 2836 | 2657 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 2451 | 2549 | 2451 | ID=MS.gene57752.t1.exon4;Parent=MS.gene57752.t1 |
| 32401 | CDS | 2451 | 2549 | 2451 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 2232 | 2368 | 2232 | ID=MS.gene57752.t1.exon5;Parent=MS.gene57752.t1 |
| 32401 | CDS | 2232 | 2368 | 2232 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 2009 | 2114 | 2009 | ID=MS.gene57752.t1.exon6;Parent=MS.gene57752.t1 |
| 32401 | CDS | 2009 | 2114 | 2009 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 1544 | 1678 | 1544 | ID=MS.gene57752.t1.exon7;Parent=MS.gene57752.t1 |
| 32401 | CDS | 1544 | 1678 | 1544 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 1371 | 1448 | 1371 | ID=MS.gene57752.t1.exon8;Parent=MS.gene57752.t1 |
| 32401 | CDS | 1371 | 1448 | 1371 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 935 | 1039 | 935 | ID=MS.gene57752.t1.exon9;Parent=MS.gene57752.t1 |
| 32401 | CDS | 935 | 1039 | 935 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 754 | 849 | 754 | ID=MS.gene57752.t1.exon10;Parent=MS.gene57752.t1 |
| 32401 | CDS | 754 | 849 | 754 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| 32401 | exon | 662 | 676 | 662 | ID=MS.gene57752.t1.exon11;Parent=MS.gene57752.t1 |
| 32401 | CDS | 662 | 676 | 662 | ID=cds.MS.gene57752.t1;Parent=MS.gene57752.t1 |
| Gene Sequence |
| Protein sequence |
