AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058411

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058411.t1 MTR_3g008640 96.429 476 17 0 1 476 52 527 0.0 969
MS.gene058411.t1 MTR_3g008720 96.218 476 18 0 1 476 52 527 0.0 967
MS.gene058411.t1 MTR_3g008700 96.218 476 18 0 1 476 52 527 0.0 967
MS.gene058411.t1 MTR_3g033690 93.908 476 28 1 1 476 52 526 0.0 944
MS.gene058411.t1 MTR_7g053360 94.748 476 25 0 1 476 52 527 0.0 936
MS.gene058411.t1 MTR_4g035980 66.667 477 151 3 7 476 64 539 0.0 670
MS.gene058411.t1 MTR_4g025690 54.219 474 203 9 4 476 53 513 3.25e-172 494
MS.gene058411.t1 MTR_4g025730 49.378 482 217 12 2 476 48 509 9.71e-156 452
MS.gene058411.t1 MTR_8g104655 45.825 491 237 6 7 476 59 541 3.73e-152 444
MS.gene058411.t1 MTR_7g108905 47.964 442 205 8 51 472 116 552 2.20e-141 417
MS.gene058411.t1 MTR_8g104645 56.140 342 145 2 139 476 32 372 1.67e-139 405
MS.gene058411.t1 MTR_7g050980 48.667 450 208 11 41 476 115 555 1.81e-135 402
MS.gene058411.t1 MTR_7g050870 47.357 454 216 10 37 476 110 554 2.35e-133 397
MS.gene058411.t1 MTR_7g050950 50.365 411 185 10 78 476 150 553 1.12e-132 395
MS.gene058411.t1 MTR_3g091380 45.217 460 219 10 46 476 142 597 5.78e-131 392
MS.gene058411.t1 MTR_4g087980 47.465 434 214 6 51 476 89 516 3.02e-130 387
MS.gene058411.t1 MTR_4g025670 45.602 432 219 7 51 476 68 489 6.53e-129 383
MS.gene058411.t1 MTR_2g044880 47.330 412 210 6 68 476 118 525 2.66e-128 383
MS.gene058411.t1 MTR_8g023310 45.815 454 215 8 51 476 139 589 2.77e-127 382
MS.gene058411.t1 MTR_4g087970 45.023 442 229 6 45 476 80 517 5.24e-127 379
MS.gene058411.t1 MTR_8g104580 41.548 491 225 8 7 476 51 500 4.11e-126 376
MS.gene058411.t1 MTR_1g008140 42.612 467 228 9 46 476 145 607 3.38e-123 372
MS.gene058411.t1 MTR_7g112580 44.494 445 217 8 51 476 109 542 8.79e-122 367
MS.gene058411.t1 MTR_1g083520 44.586 471 243 10 22 476 60 528 8.06e-121 363
MS.gene058411.t1 MTR_2g044810 42.956 433 232 8 51 476 110 534 5.11e-120 362
MS.gene058411.t1 MTR_7g108900 42.184 467 225 9 51 476 98 560 1.96e-119 361
MS.gene058411.t1 MTR_8g042900 42.887 485 245 11 15 476 106 581 2.80e-119 361
MS.gene058411.t1 MTR_4g124520 42.824 425 227 7 61 476 104 521 1.42e-117 355
MS.gene058411.t1 MTR_1g054880 43.197 463 223 9 51 476 99 558 1.16e-116 354
MS.gene058411.t1 MTR_8g042910 51.051 333 156 4 149 476 282 612 1.73e-116 355
MS.gene058411.t1 MTR_3g010780 42.650 483 247 12 15 476 101 574 1.95e-116 354
MS.gene058411.t1 MTR_1g088020 42.521 468 221 10 51 476 94 555 1.89e-114 348
MS.gene058411.t1 MTR_7g108875 40.120 501 254 11 19 476 67 564 3.28e-113 345
MS.gene058411.t1 MTR_3g010770 52.698 315 145 3 164 476 263 575 1.78e-112 343
MS.gene058411.t1 MTR_7g108890 50.450 333 158 4 149 476 232 562 1.10e-110 338
MS.gene058411.t1 MTR_1g088225 41.880 468 222 11 51 476 94 553 1.45e-108 333
MS.gene058411.t1 MTR_0458s0030 56.835 278 114 4 202 476 40 314 1.06e-107 322
MS.gene058411.t1 MTR_1g088040 56.835 278 114 4 202 476 40 314 1.06e-107 322
MS.gene058411.t1 MTR_8g023150 40.166 483 262 9 15 476 106 582 1.60e-105 326
MS.gene058411.t1 MTR_4g124550 39.741 463 244 8 41 476 139 593 2.31e-104 323
MS.gene058411.t1 MTR_0618s0020 62.281 228 85 1 249 476 2 228 6.70e-104 309
MS.gene058411.t1 MTR_1g083470 38.235 442 249 7 52 472 128 566 1.08e-99 311
MS.gene058411.t1 MTR_1g083500 38.235 442 249 7 52 472 128 566 1.08e-99 311
MS.gene058411.t1 MTR_4g005170 38.826 443 245 8 52 472 133 571 2.69e-98 309
MS.gene058411.t1 MTR_1g083510 37.716 464 244 13 52 475 124 582 3.51e-98 307
MS.gene058411.t1 MTR_1g083490 38.375 443 247 8 52 472 133 571 8.01e-98 306
MS.gene058411.t1 MTR_4g005180 37.634 465 263 9 30 472 94 553 5.63e-97 303
MS.gene058411.t1 MTR_1g086210 43.103 348 189 5 136 476 224 569 7.37e-93 293
MS.gene058411.t1 MTR_4g120290 35.021 474 274 8 27 475 107 571 1.21e-92 293
MS.gene058411.t1 MTR_2g044810 51.575 254 121 2 223 476 214 465 1.82e-92 288
MS.gene058411.t1 MTR_4g120280 37.232 419 235 6 81 475 157 571 2.20e-91 289
MS.gene058411.t1 MTR_1g086190 38.397 474 258 11 30 476 97 563 2.32e-91 289
MS.gene058411.t1 MTR_3g095920 38.105 475 238 14 31 465 95 553 4.25e-91 288
MS.gene058411.t1 MTR_8g093460 37.917 480 245 15 22 468 84 543 5.33e-91 288
MS.gene058411.t1 MTR_2g436040 38.084 407 232 8 81 473 143 543 8.15e-91 289
MS.gene058411.t1 MTR_2g044660 46.497 314 161 5 163 476 326 632 6.58e-89 284
MS.gene058411.t1 MTR_7g112590 36.580 462 249 11 52 475 127 582 6.82e-89 283
MS.gene058411.t1 MTR_8g088610 42.398 342 192 3 133 473 36 373 2.24e-88 275
MS.gene058411.t1 MTR_7g110440 35.169 472 282 10 17 476 115 574 2.01e-84 271
MS.gene058411.t1 MTR_7g110490 39.086 394 224 6 89 471 181 569 5.41e-84 270
MS.gene058411.t1 MTR_7g110510 39.086 394 224 6 89 471 181 569 5.41e-84 270
MS.gene058411.t1 MTR_2g436050 36.957 414 238 7 81 475 154 563 8.32e-84 269
MS.gene058411.t1 MTR_5g083620 38.764 356 206 7 127 476 7 356 2.80e-80 253
MS.gene058411.t1 MTR_7g110560 40.351 342 195 4 140 476 212 549 7.31e-78 253
MS.gene058411.t1 MTR_2g105560 40.317 315 172 5 163 476 40 339 1.52e-74 238
MS.gene058411.t1 MTR_7g110420 38.611 360 198 6 139 476 228 586 2.82e-74 244
MS.gene058411.t1 MTR_7g107180 40.446 314 173 6 164 476 7 307 1.35e-72 232
MS.gene058411.t1 MTR_7g110430 33.250 400 215 9 89 476 181 540 5.49e-63 214
MS.gene058411.t1 MTR_7g111560 33.108 444 267 14 51 476 125 556 2.01e-60 207
MS.gene058411.t1 MTR_6g012800 34.641 306 174 7 164 459 6 295 2.90e-56 189
MS.gene058411.t1 MTR_2g039530 37.725 334 184 9 134 460 23 339 1.92e-55 188
MS.gene058411.t1 MTR_6g024165 37.423 326 173 11 152 466 30 335 2.29e-54 185
MS.gene058411.t1 MTR_6g088810 35.057 348 191 11 136 465 47 377 2.39e-54 186
MS.gene058411.t1 MTR_0458s0010 31.838 468 234 14 51 476 94 518 2.95e-54 190
MS.gene058411.t1 MTR_1g086540 37.460 315 170 8 161 465 47 344 7.70e-54 184
MS.gene058411.t1 MTR_8g102380 35.629 334 179 12 146 465 66 377 2.89e-53 184
MS.gene058411.t1 MTR_7g011530 34.035 285 161 6 166 438 8 277 5.31e-49 171
MS.gene058411.t1 MTR_7g102600 31.165 369 217 11 105 465 54 393 2.93e-47 168
MS.gene058411.t1 MTR_8g102380 35.943 281 148 9 146 412 66 328 6.49e-45 160
MS.gene058411.t1 MTR_5g095490 33.766 308 175 9 170 465 67 357 5.56e-43 155
MS.gene058411.t1 MTR_6g042660 33.808 281 159 9 164 438 37 296 6.26e-43 155
MS.gene058411.t1 MTR_7g092780 32.803 314 187 7 164 467 90 389 1.25e-42 155
MS.gene058411.t1 MTR_5g093970 32.673 303 189 5 164 466 43 330 1.42e-42 154
MS.gene058411.t1 MTR_5g083590 31.429 315 163 5 163 476 6 268 5.90e-42 150
MS.gene058411.t1 MTR_4g124740 31.692 325 187 10 150 465 41 339 8.77e-41 149
MS.gene058411.t1 MTR_1g033050 33.455 275 159 7 172 438 26 284 1.53e-40 148
MS.gene058411.t1 MTR_5g012600 30.380 316 193 8 164 468 63 362 4.64e-40 148
MS.gene058411.t1 MTR_6g042690 33.099 284 162 8 164 438 39 303 1.49e-37 140
MS.gene058411.t1 MTR_2g033970 29.878 328 201 8 147 465 39 346 2.23e-37 140
MS.gene058411.t1 MTR_5g088300 33.091 275 165 6 164 438 37 292 7.54e-37 138
MS.gene058411.t1 MTR_5g088280 31.900 279 171 6 160 438 35 294 2.88e-35 134
MS.gene058411.t1 MTR_2g073390 29.706 340 200 10 145 465 42 361 3.49e-35 135
MS.gene058411.t1 MTR_4g074290 28.783 337 209 9 144 465 41 361 2.97e-34 132
MS.gene058411.t1 MTR_4g051810 30.844 308 190 7 160 466 33 318 4.71e-34 130
MS.gene058411.t1 MTR_5g088290 31.636 275 170 5 164 438 48 304 2.63e-33 129
MS.gene058411.t1 MTR_0009s0350 29.204 339 205 10 144 465 41 361 4.44e-32 126
MS.gene058411.t1 MTR_0009s0340 29.204 339 205 10 144 465 41 361 4.44e-32 126
MS.gene058411.t1 MTR_2g436600 28.267 329 196 10 147 465 38 336 2.04e-30 121
MS.gene058411.t1 MTR_8g036225 30.033 303 180 11 146 438 18 298 1.67e-29 118
MS.gene058411.t1 MTR_6g025590 37.126 167 96 5 166 324 51 216 1.62e-25 105
MS.gene058411.t1 MTR_0408s0030 40.594 101 50 2 338 438 33 123 4.56e-18 81.6
MS.gene058411.t1 MTR_4g130790 31.720 186 113 5 170 346 30 210 1.96e-17 82.4
MS.gene058411.t1 MTR_6g024200 37.600 125 66 3 341 465 164 276 3.33e-16 79.3
MS.gene058411.t1 MTR_2g436070 31.034 174 96 5 81 236 154 321 2.88e-14 74.7
MS.gene058411.t1 MTR_7g102570 32.174 115 65 3 324 436 3 106 1.16e-11 62.0
MS.gene058411.t1 MTR_7g102580 40.698 86 41 3 239 319 73 153 1.91e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058411.t1 AT3G47400 57.380 481 192 7 8 476 115 594 0.0 551
MS.gene058411.t1 AT5G51490 56.092 476 194 7 12 476 65 536 0.0 549
MS.gene058411.t1 AT5G51500 55.901 483 199 10 5 476 61 540 0.0 545
MS.gene058411.t1 AT2G45220 50.420 476 220 10 2 476 51 511 2.25e-158 459
MS.gene058411.t1 AT4G00190 44.915 472 239 9 7 476 22 474 1.52e-135 399
MS.gene058411.t1 AT1G23200 44.135 503 226 10 13 476 68 554 6.98e-135 400
MS.gene058411.t1 AT1G11580 46.667 465 231 8 22 476 100 557 1.14e-132 395
MS.gene058411.t1 AT1G11580 46.667 465 231 8 22 476 121 578 3.40e-132 394
MS.gene058411.t1 AT5G53370 45.575 452 221 7 46 476 138 585 1.39e-130 390
MS.gene058411.t1 AT3G60730 44.060 463 224 7 43 476 63 519 2.86e-130 387
MS.gene058411.t1 AT5G53370 45.575 452 221 7 46 476 174 621 7.53e-130 390
MS.gene058411.t1 AT3G14310 45.570 474 212 8 45 476 123 592 1.55e-127 383
MS.gene058411.t1 AT3G59010 44.421 475 232 8 18 476 70 528 2.06e-126 378
MS.gene058411.t1 AT3G43270 44.843 446 223 7 51 476 83 525 1.13e-125 376
MS.gene058411.t1 AT3G49220 44.690 452 223 8 46 476 151 596 1.88e-125 378
MS.gene058411.t1 AT1G53830 46.087 460 210 8 51 476 132 587 2.05e-125 377
MS.gene058411.t1 AT4G02320 44.643 448 217 8 51 476 80 518 2.56e-125 375
MS.gene058411.t1 AT3G49220 44.690 452 223 8 46 476 196 641 1.37e-124 377
MS.gene058411.t1 AT4G02300 44.244 443 224 9 51 476 96 532 6.77e-124 372
MS.gene058411.t1 AT4G33220 42.670 457 227 7 51 476 71 523 1.14e-120 363
MS.gene058411.t1 AT2G43050 45.183 436 210 8 51 476 100 516 2.72e-120 362
MS.gene058411.t1 AT5G04960 43.125 480 239 11 15 474 97 562 1.19e-119 362
MS.gene058411.t1 AT4G33220 50.289 346 169 3 131 476 60 402 2.64e-119 355
MS.gene058411.t1 AT5G20860 43.864 440 229 9 47 476 107 538 6.86e-119 359
MS.gene058411.t1 AT2G47550 53.134 335 150 4 147 476 226 558 7.12e-117 354
MS.gene058411.t1 AT4G02330 48.468 359 169 5 125 476 222 571 7.20e-117 355
MS.gene058411.t1 AT3G05620 45.658 403 197 8 83 476 152 541 4.03e-116 352
MS.gene058411.t1 AT1G02810 53.016 315 144 3 164 476 265 577 7.22e-116 352
MS.gene058411.t1 AT2G26450 39.545 483 265 8 7 476 143 611 2.38e-114 350
MS.gene058411.t1 AT2G26440 41.648 449 231 9 51 476 107 547 1.80e-113 345
MS.gene058411.t1 AT5G49180 40.638 470 252 9 27 472 100 566 2.87e-113 345
MS.gene058411.t1 AT3G10710 44.009 434 226 9 52 476 136 561 1.16e-111 341
MS.gene058411.t1 AT5G27870 38.382 482 277 8 11 476 85 562 2.94e-111 345
MS.gene058411.t1 AT3G05610 38.843 484 274 8 11 476 86 565 9.24e-111 342
MS.gene058411.t1 AT3G27980 44.638 401 204 8 84 476 107 497 2.38e-109 333
MS.gene058411.t1 AT1G11590 40.909 484 255 14 14 476 51 524 5.62e-109 333
MS.gene058411.t1 AT4G33230 38.655 476 258 10 22 476 144 606 1.50e-108 335
MS.gene058411.t1 AT3G06830 37.423 489 272 11 17 474 81 566 2.35e-107 330
MS.gene058411.t1 AT4G03930 39.915 471 238 11 19 476 86 524 4.80e-107 328
MS.gene058411.t1 AT3G10720 51.429 315 149 3 164 476 303 615 1.57e-106 330
MS.gene058411.t1 AT5G04970 48.276 319 161 3 160 476 304 620 7.62e-101 315
MS.gene058411.t1 AT3G10720 55.556 261 114 2 216 476 1 259 7.66e-100 300
MS.gene058411.t1 AT1G53840 37.067 491 263 11 15 470 102 581 9.64e-98 306
MS.gene058411.t1 AT5G20860 40.573 419 203 8 47 455 107 489 1.22e-97 303
MS.gene058411.t1 AT3G14300 38.365 477 259 10 5 461 492 953 4.91e-95 308
MS.gene058411.t1 AT4G15980 41.873 363 203 6 117 474 341 700 3.10e-90 290
MS.gene058411.t1 AT4G15980 41.873 363 203 6 117 474 351 710 4.47e-90 289
MS.gene058411.t1 AT5G09760 48.495 299 140 5 158 443 235 532 1.24e-86 276
MS.gene058411.t1 AT5G09760 48.495 299 140 5 158 443 261 558 2.44e-86 276
MS.gene058411.t1 AT5G64640 38.061 423 217 12 81 468 189 601 3.04e-82 266
MS.gene058411.t1 AT1G11370 48.583 247 126 1 161 407 43 288 3.37e-81 253
MS.gene058411.t1 AT2G47030 39.045 356 199 6 135 476 237 588 2.09e-73 243
MS.gene058411.t1 AT2G47040 38.527 353 202 6 135 476 247 595 3.13e-73 242
MS.gene058411.t1 AT3G62170 37.432 366 199 9 135 476 229 588 7.41e-70 233
MS.gene058411.t1 AT2G36700 34.591 318 185 9 156 465 31 333 3.79e-51 177
MS.gene058411.t1 AT2G36710 33.856 319 188 8 161 470 86 390 3.92e-51 179
MS.gene058411.t1 AT2G21610 33.887 301 177 7 166 465 53 332 4.59e-51 177
MS.gene058411.t1 AT2G21610 33.887 301 177 7 166 465 58 337 7.99e-51 177
MS.gene058411.t1 AT5G19730 31.215 362 204 11 127 465 42 381 1.35e-50 177
MS.gene058411.t1 AT3G29090 33.684 285 162 6 166 438 9 278 7.19e-49 170
MS.gene058411.t1 AT1G05310 33.654 312 183 7 164 465 91 388 7.27e-46 164
MS.gene058411.t1 AT3G17060 30.960 323 192 8 153 465 35 336 1.16e-42 154
MS.gene058411.t1 AT5G47500 30.000 330 200 10 149 466 48 358 2.71e-40 149
MS.gene058411.t1 AT1G44980 41.270 189 107 3 143 328 54 241 1.04e-38 141
MS.gene058411.t1 AT5G07430 29.882 338 206 10 142 465 35 355 1.09e-38 144
MS.gene058411.t1 AT5G55590 33.333 318 183 10 160 465 78 378 1.11e-37 142
MS.gene058411.t1 AT3G24130 31.818 286 169 7 164 438 34 304 1.89e-37 140
MS.gene058411.t1 AT5G55590 34.866 261 145 7 160 408 78 325 8.08e-37 138
MS.gene058411.t1 AT5G07420 29.794 339 205 10 142 465 35 355 1.19e-36 139
MS.gene058411.t1 AT5G18990 29.900 301 174 9 153 438 21 299 1.11e-32 127
MS.gene058411.t1 AT5G26810 29.592 294 169 8 164 438 34 308 3.65e-32 125
MS.gene058411.t1 AT5G61680 28.909 339 203 12 145 465 40 358 4.45e-32 126
MS.gene058411.t1 AT5G07410 28.657 335 207 11 145 465 39 355 1.30e-31 125
MS.gene058411.t1 AT1G69940 28.060 335 209 11 145 465 39 355 1.04e-30 122
MS.gene058411.t1 AT2G19150 26.970 330 205 9 156 472 33 339 6.95e-30 119
MS.gene058411.t1 AT2G19150 28.571 266 158 7 156 408 33 279 2.28e-27 111
MS.gene058411.t1 AT2G47280 27.397 292 180 8 160 438 31 303 8.65e-27 110
MS.gene058411.t1 AT3G49220 31.081 222 127 7 46 246 196 412 2.63e-24 105

Find 102 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCACAATTGTCAAATT+AGG 0.096980 3.2:-3038393 MS.gene058411:CDS
TACAGACAATGTTTCATTTA+TGG 0.113744 3.2:-3038553 MS.gene058411:CDS
GGCACTGTAGACTTCATATT+TGG 0.203147 3.2:-3038532 MS.gene058411:CDS
TTGCGAAAATGTTACAGTTT+TGG 0.235352 3.2:+3038491 None:intergenic
TCATGAACAGAAAACCAATT+TGG 0.238341 3.2:+3039276 None:intergenic
GCATCAAAGTTTACGGTTAC+TGG 0.240632 3.2:-3038112 MS.gene058411:CDS
TGTGAGGACCAGCAGTATTT+TGG 0.243797 3.2:+3038683 None:intergenic
AAGAAGAGTCATTTCCAAAT+TGG 0.250952 3.2:-3039290 MS.gene058411:CDS
GCTCAAGATACATTGTATTA+TGG 0.258364 3.2:-3038220 MS.gene058411:CDS
ACCACAAGATTGTACTTTAC+TGG 0.268962 3.2:+3039228 None:intergenic
ATTCCACAATTGTCAAATTA+GGG 0.271376 3.2:-3038392 MS.gene058411:CDS
ACGGTTACTGGACTCCTTGC+TGG 0.289286 3.2:-3038100 MS.gene058411:CDS
GGAATGAAATTCCAGTGTTT+TGG 0.313831 3.2:+3038410 None:intergenic
CATTTAAATTTAGGTATTGA+TGG 0.320933 3.2:-3038736 MS.gene058411:intron
TATGGAGAGTATGAGAATTA+TGG 0.325330 3.2:-3038202 MS.gene058411:CDS
TCAAACATAGAGTTGAATTC+AGG 0.331287 3.2:-3040079 MS.gene058411:CDS
GATCAAAGACCAGATGTAAA+TGG 0.333623 3.2:+3038049 None:intergenic
CATCTCAGCCGCACACTTGA+AGG 0.342128 3.2:-3039915 MS.gene058411:CDS
GTAAACTTTGATGCTTCCTT+AGG 0.347510 3.2:+3038121 None:intergenic
TAAGGAAGCATCAAAGTTTA+CGG 0.357836 3.2:-3038119 MS.gene058411:CDS
TTCTACCGGTGTGCTATATC+AGG 0.383983 3.2:-3038616 MS.gene058411:CDS
CTGGTTCATCAACAGCAAAC+AGG 0.401229 3.2:-3038177 MS.gene058411:CDS
TGACAAGTACAAAACCTTCC+TGG 0.405163 3.2:-3038344 MS.gene058411:CDS
GAATGGATCACCTCGACCTT+GGG 0.406727 3.2:+3038432 None:intergenic
AGCCATGTTTGTGCATCATT+TGG 0.409326 3.2:+3039864 None:intergenic
TTTCATGAAATGCATATTGA+TGG 0.410824 3.2:+3039725 None:intergenic
GCAACAATATTCAAGAGTTA+TGG 0.414279 3.2:-3038311 MS.gene058411:CDS
AAACCTTCCTGGGCAGGCCT+TGG 0.419119 3.2:-3038333 MS.gene058411:CDS
CAACAGCAAACAGGGTGAAA+TGG 0.423776 3.2:-3038168 MS.gene058411:CDS
CCAATGTCATTGAGATGATA+AGG 0.424647 3.2:-3039758 MS.gene058411:CDS
GTGGTTGCGAAAGATGGTTC+TGG 0.428910 3.2:-3039210 MS.gene058411:CDS
TCAGTGCATAAAACGGTTCA+TGG 0.448897 3.2:-3039972 MS.gene058411:CDS
GGAATGGATCACCTCGACCT+TGG 0.452399 3.2:+3038431 None:intergenic
AATCTTGTGGTTGCGAAAGA+TGG 0.453128 3.2:-3039216 MS.gene058411:CDS
ACAAGCTCTAGAAGTGTTCA+AGG 0.465823 3.2:-3039021 MS.gene058411:CDS
CAGCCCTAATTTGACAATTG+TGG 0.474354 3.2:+3038389 None:intergenic
TCACCCCATGGAGACCAACC+TGG 0.478370 3.2:+3038253 None:intergenic
AACATTATGTTGGTTGGTGA+TGG 0.482195 3.2:-3039063 MS.gene058411:CDS
CTGATCTATCTGTCTTCTAC+CGG 0.482455 3.2:-3038630 MS.gene058411:CDS
ACTACTGTGCCATTTACATC+TGG 0.484988 3.2:-3038058 MS.gene058411:CDS
TAAACTTTGATGCTTCCTTA+GGG 0.485228 3.2:+3038122 None:intergenic
ATTGTACTTTACTGGAGACT+TGG 0.493638 3.2:+3039236 None:intergenic
AATATTGAAACATGTAAAAG+TGG 0.495425 3.2:-3039825 MS.gene058411:CDS
TTTGTGATACATGTTAAGAA+AGG 0.500212 3.2:-3039126 MS.gene058411:CDS
CCTTATCATCTCAATGACAT+TGG 0.503793 3.2:+3039758 None:intergenic
GGGCGGTGATCATGTTAGCT+TGG 0.512801 3.2:+3038452 None:intergenic
TAGGGCTGCATCAGATCTAA+AGG 0.520031 3.2:-3038374 MS.gene058411:CDS
CAGATAGATCAGAGGCTGAT+CGG 0.521445 3.2:+3038641 None:intergenic
CAAACATAGAGTTGAATTCA+GGG 0.525299 3.2:-3040078 MS.gene058411:CDS
GACAAGTACAAAACCTTCCT+GGG 0.525686 3.2:-3038343 MS.gene058411:CDS
ATGATCACCGCCCAAGGTCG+AGG 0.526125 3.2:-3038442 MS.gene058411:CDS
AATGATAACATTATGTTGGT+TGG 0.527056 3.2:-3039069 MS.gene058411:CDS
CATGAGCCATGAGGGTGTCT+TGG 0.529891 3.2:+3038590 None:intergenic
CACCCCATGGAGACCAACCT+GGG 0.530544 3.2:+3038254 None:intergenic
CTGTTTGCTGTTGATGAACC+AGG 0.531874 3.2:+3038178 None:intergenic
GCAAACAGGGTGAAATGGCC+TGG 0.531958 3.2:-3038163 MS.gene058411:CDS
TTCGCAAGAAAGCCTTTGGA+TGG 0.536363 3.2:-3038475 MS.gene058411:CDS
ACTCTTGAATATTGTTGCCA+AGG 0.536658 3.2:+3038316 None:intergenic
ATTGTTGCCAAGGCCTGCCC+AGG 0.539912 3.2:+3038326 None:intergenic
ATGGACTTCACTTCATTGCA+CGG 0.543309 3.2:-3038717 MS.gene058411:CDS
TGCTGTTGCAGAGCTATAAG+TGG 0.543731 3.2:+3038990 None:intergenic
AGTACAAAACCTTCCTGGGC+AGG 0.545921 3.2:-3038339 MS.gene058411:CDS
AAACTCATCAGTGCATAAAA+CGG 0.551962 3.2:-3039979 MS.gene058411:CDS
ACTTATAGCTCTGCAACAGC+AGG 0.557059 3.2:-3038988 MS.gene058411:intron
TCCTCACAAGGGTCAAGCTG+TGG 0.557729 3.2:-3038668 MS.gene058411:CDS
AAATACTGCTGGTCCTCACA+AGG 0.561048 3.2:-3038680 MS.gene058411:CDS
CACCAAATGATGCACAAACA+TGG 0.565228 3.2:-3039866 MS.gene058411:CDS
TGCATCAGATCTAAAGGCTG+TGG 0.565883 3.2:-3038368 MS.gene058411:CDS
ATAACCTTCCAAAATACTGC+TGG 0.566373 3.2:-3038691 MS.gene058411:CDS
CTAAGAGAAAATACAGGACA+AGG 0.578008 3.2:-3039149 MS.gene058411:CDS
TGGACTTCACTTCATTGCAC+GGG 0.579713 3.2:-3038716 MS.gene058411:CDS
GGTGATCCATTCCAAAACAC+TGG 0.579879 3.2:-3038421 MS.gene058411:CDS
TTGCCAAGGCCTGCCCAGGA+AGG 0.582257 3.2:+3038330 None:intergenic
TCATGTGATAACAAACCCTA+AGG 0.582871 3.2:-3038137 MS.gene058411:CDS
TCATAATGATAACATTATGT+TGG 0.583208 3.2:-3039073 MS.gene058411:CDS
ATGTTAGCTTGGCCATCCAA+AGG 0.583281 3.2:+3038463 None:intergenic
CCTTGCTGGACCAACATGGT+TGG 0.591137 3.2:-3038086 MS.gene058411:CDS
TGGATCACCTCGACCTTGGG+CGG 0.595949 3.2:+3038435 None:intergenic
TCCAGTAAAGTACAATCTTG+TGG 0.603808 3.2:-3039229 MS.gene058411:CDS
TGTTTAAGCCTTCAAGTGTG+CGG 0.604466 3.2:+3039907 None:intergenic
GCCACAGCTTGACCCTTGTG+AGG 0.610896 3.2:+3038667 None:intergenic
GCTAACATGATCACCGCCCA+AGG 0.613648 3.2:-3038448 MS.gene058411:CDS
TGTTTATAGAGAGAACATTG+AGG 0.615615 3.2:-3039103 MS.gene058411:CDS
TGGTTCATCAACAGCAAACA+GGG 0.617491 3.2:-3038176 MS.gene058411:CDS
TTTGTTATCACATGATAACC+AGG 0.617495 3.2:+3038145 None:intergenic
GCAAAATCAGTGTCACCCCA+TGG 0.619580 3.2:+3038241 None:intergenic
GACTCCTTGCTGGACCAACA+TGG 0.622054 3.2:-3038090 MS.gene058411:CDS
CTGCTGCTAAGAGAAAATAC+AGG 0.626019 3.2:-3039155 MS.gene058411:CDS
ACCCCATGGAGACCAACCTG+GGG 0.627096 3.2:+3038255 None:intergenic
CCAACCATGTTGGTCCAGCA+AGG 0.628774 3.2:+3038086 None:intergenic
AGGCTACCAAGACACCCTCA+TGG 0.632122 3.2:-3038596 MS.gene058411:CDS
CCCCATGGAGACCAACCTGG+GGG 0.656474 3.2:+3038256 None:intergenic
GAGTATGAGAATTATGGACC+TGG 0.657686 3.2:-3038196 MS.gene058411:CDS
GTAGAAGACAGATAGATCAG+AGG 0.666155 3.2:+3038633 None:intergenic
ACGTTGTGCATGAGCCATGA+GGG 0.666275 3.2:+3038582 None:intergenic
GTAGTTGTAGCCAACCATGT+TGG 0.667448 3.2:+3038076 None:intergenic
CCCATGGAGACCAACCTGGG+GGG 0.685029 3.2:+3038257 None:intergenic
AATACTGCTGGTCCTCACAA+GGG 0.685253 3.2:-3038679 MS.gene058411:CDS
CATTTCATGAAACATGACAA+AGG 0.696167 3.2:-3039714 MS.gene058411:intron
GACGTTGTGCATGAGCCATG+AGG 0.724421 3.2:+3038581 None:intergenic
AGCTCTAGAAGTGTTCAAGG+TGG 0.733912 3.2:-3039018 MS.gene058411:CDS
GGTAGCCTGATATAGCACAC+CGG 0.754487 3.2:+3038611 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATATAAAATAATTTCTT+TGG - chr3.2:3039272-3039291 MS.gene058411:CDS 10.0%
!! TAAATTATTGAATGTTTATT+TGG - chr3.2:3038745-3038764 MS.gene058411:intron 10.0%
!!! ATAATTCAATAACTTTATTT+AGG - chr3.2:3038705-3038724 MS.gene058411:CDS 10.0%
!!! CTAAAATTTTATAATAAGAT+AGG - chr3.2:3039321-3039340 MS.gene058411:intron 10.0%
!!! AGTACAATACTTAAATTTTA+AGG + chr3.2:3038677-3038696 None:intergenic 15.0%
!!! GTACAATACTTAAATTTTAA+GGG + chr3.2:3038676-3038695 None:intergenic 15.0%
!!! TACAATACTTAAATTTTAAG+GGG + chr3.2:3038675-3038694 None:intergenic 15.0%
!!! TTTTTTAAAATAATCACTCT+TGG - chr3.2:3039388-3039407 MS.gene058411:intron 15.0%
!! AATATTGAAACATGTAAAAG+TGG - chr3.2:3038324-3038343 MS.gene058411:CDS 20.0%
!! ACAAGAAAATAAAAAGAGAA+AGG + chr3.2:3039204-3039223 None:intergenic 20.0%
!! TCATAATGATAACATTATGT+TGG - chr3.2:3039076-3039095 MS.gene058411:CDS 20.0%
!!! ATTCAATAACTTTATTTAGG+AGG - chr3.2:3038708-3038727 MS.gene058411:CDS 20.0%
!!! CATTTAAATTTAGGTATTGA+TGG - chr3.2:3039413-3039432 MS.gene058411:intron 20.0%
! AATGATAACATTATGTTGGT+TGG - chr3.2:3039080-3039099 MS.gene058411:CDS 25.0%
! AGGTGTTTAATATTTCTTTG+CGG - chr3.2:3039341-3039360 MS.gene058411:intron 25.0%
! ATTCCACAATTGTCAAATTA+GGG - chr3.2:3039757-3039776 MS.gene058411:CDS 25.0%
! CAAGACATAATTTCTACTAA+TGG + chr3.2:3038545-3038564 None:intergenic 25.0%
! CATTAGTAGAAATTATGTCT+TGG - chr3.2:3038543-3038562 MS.gene058411:CDS 25.0%
! CTCTTGGATCATTTAAATTT+AGG - chr3.2:3039404-3039423 MS.gene058411:intron 25.0%
! TACAGACAATGTTTCATTTA+TGG - chr3.2:3039596-3039615 MS.gene058411:intron 25.0%
! TTTCATGAAATGCATATTGA+TGG + chr3.2:3038427-3038446 None:intergenic 25.0%
! TTTGTGATACATGTTAAGAA+AGG - chr3.2:3039023-3039042 MS.gene058411:CDS 25.0%
!!! TATGGTGATGAAAACTTTTA+TGG - chr3.2:3039856-3039875 MS.gene058411:CDS 25.0%
AAACTCATCAGTGCATAAAA+CGG - chr3.2:3038170-3038189 MS.gene058411:CDS 30.0%
AAGAAGAGTCATTTCCAAAT+TGG - chr3.2:3038859-3038878 MS.gene058411:intron 30.0%
CAAACATAGAGTTGAATTCA+GGG - chr3.2:3038071-3038090 MS.gene058411:CDS 30.0%
CATTCCACAATTGTCAAATT+AGG - chr3.2:3039756-3039775 MS.gene058411:CDS 30.0%
CATTTCATGAAACATGACAA+AGG - chr3.2:3038435-3038454 MS.gene058411:CDS 30.0%
GCAACAATATTCAAGAGTTA+TGG - chr3.2:3039838-3039857 MS.gene058411:CDS 30.0%
GCTCAAGATACATTGTATTA+TGG - chr3.2:3039929-3039948 MS.gene058411:CDS 30.0%
TAAACTTTGATGCTTCCTTA+GGG + chr3.2:3040030-3040049 None:intergenic 30.0%
TCAAACATAGAGTTGAATTC+AGG - chr3.2:3038070-3038089 MS.gene058411:CDS 30.0%
TCATGAACAGAAAACCAATT+TGG + chr3.2:3038876-3038895 None:intergenic 30.0%
TGTTTATAGAGAGAACATTG+AGG - chr3.2:3039046-3039065 MS.gene058411:CDS 30.0%
! TATGGAGAGTATGAGAATTA+TGG - chr3.2:3039947-3039966 MS.gene058411:CDS 30.0%
! TTGCGAAAATGTTACAGTTT+TGG + chr3.2:3039661-3039680 None:intergenic 30.0%
! TTTGTTATCACATGATAACC+AGG + chr3.2:3040007-3040026 None:intergenic 30.0%
!! TAAGGAAGCATCAAAGTTTA+CGG - chr3.2:3040030-3040049 MS.gene058411:CDS 30.0%
!!! ATTGGTTTTCTGTTCATGAA+AGG - chr3.2:3038877-3038896 MS.gene058411:intron 30.0%
!!! CATTGTAAGAGCTTGTTTTA+AGG + chr3.2:3038115-3038134 None:intergenic 30.0%
ACCACAAGATTGTACTTTAC+TGG + chr3.2:3038924-3038943 None:intergenic 35.0%
ACTCTTGAATATTGTTGCCA+AGG + chr3.2:3039836-3039855 None:intergenic 35.0%
ATAACCTTCCAAAATACTGC+TGG - chr3.2:3039458-3039477 MS.gene058411:intron 35.0%
ATTGTACTTTACTGGAGACT+TGG + chr3.2:3038916-3038935 None:intergenic 35.0%
CCAATGTCATTGAGATGATA+AGG - chr3.2:3038391-3038410 MS.gene058411:CDS 35.0%
CCTTATCATCTCAATGACAT+TGG + chr3.2:3038394-3038413 None:intergenic 35.0%
CTAAGAGAAAATACAGGACA+AGG - chr3.2:3039000-3039019 MS.gene058411:CDS 35.0%
GTAAACTTTGATGCTTCCTT+AGG + chr3.2:3040031-3040050 None:intergenic 35.0%
TACTTTAACCAATGCCTCAA+GGG - chr3.2:3038635-3038654 MS.gene058411:CDS 35.0%
TCATGTGATAACAAACCCTA+AGG - chr3.2:3040012-3040031 MS.gene058411:CDS 35.0%
TCCAGTAAAGTACAATCTTG+TGG - chr3.2:3038920-3038939 MS.gene058411:intron 35.0%
! GGAATGAAATTCCAGTGTTT+TGG + chr3.2:3039742-3039761 None:intergenic 35.0%
!! AACATTATGTTGGTTGGTGA+TGG - chr3.2:3039086-3039105 MS.gene058411:CDS 35.0%
!! TATGCACTGATGAGTTTTGT+TGG + chr3.2:3038167-3038186 None:intergenic 35.0%
!!! ACAGTTTTGGAATACAACTG+CGG + chr3.2:3039648-3039667 None:intergenic 35.0%
!!! GAAATTCCAGTGTTTTGGAA+TGG + chr3.2:3039737-3039756 None:intergenic 35.0%
AATCTTGTGGTTGCGAAAGA+TGG - chr3.2:3038933-3038952 MS.gene058411:intron 40.0%
AGCCATGTTTGTGCATCATT+TGG + chr3.2:3038288-3038307 None:intergenic 40.0%
ATGGACTTCACTTCATTGCA+CGG - chr3.2:3039432-3039451 MS.gene058411:intron 40.0%
CACCAAATGATGCACAAACA+TGG - chr3.2:3038283-3038302 MS.gene058411:CDS 40.0%
CAGCCCTAATTTGACAATTG+TGG + chr3.2:3039763-3039782 None:intergenic 40.0%
CTGATCTATCTGTCTTCTAC+CGG - chr3.2:3039519-3039538 MS.gene058411:intron 40.0%
CTGCTGCTAAGAGAAAATAC+AGG - chr3.2:3038994-3039013 MS.gene058411:CDS 40.0%
GACAAGTACAAAACCTTCCT+GGG - chr3.2:3039806-3039825 MS.gene058411:CDS 40.0%
GAGTATGAGAATTATGGACC+TGG - chr3.2:3039953-3039972 MS.gene058411:CDS 40.0%
GCATCAAAGTTTACGGTTAC+TGG - chr3.2:3040037-3040056 MS.gene058411:CDS 40.0%
GGCACTGTAGACTTCATATT+TGG - chr3.2:3039617-3039636 MS.gene058411:intron 40.0%
GTACTTTAACCAATGCCTCA+AGG - chr3.2:3038634-3038653 MS.gene058411:CDS 40.0%
GTAGAAGACAGATAGATCAG+AGG + chr3.2:3039519-3039538 None:intergenic 40.0%
TCAGTGCATAAAACGGTTCA+TGG - chr3.2:3038177-3038196 MS.gene058411:CDS 40.0%
TGACAAGTACAAAACCTTCC+TGG - chr3.2:3039805-3039824 MS.gene058411:CDS 40.0%
TGGTTCATCAACAGCAAACA+GGG - chr3.2:3039973-3039992 MS.gene058411:CDS 40.0%
TGTTTAAGCCTTCAAGTGTG+CGG + chr3.2:3038245-3038264 None:intergenic 40.0%
! CATTTTCGCAAGAAAGCCTT+TGG - chr3.2:3039670-3039689 MS.gene058411:intron 40.0%
!! ACAAGCTCTAGAAGTGTTCA+AGG - chr3.2:3039128-3039147 MS.gene058411:CDS 40.0%
!! ACTACTGTGCCATTTACATC+TGG - chr3.2:3040091-3040110 MS.gene058411:CDS 40.0%
AAATACTGCTGGTCCTCACA+AGG - chr3.2:3039469-3039488 MS.gene058411:intron 45.0%
AATACTGCTGGTCCTCACAA+GGG - chr3.2:3039470-3039489 MS.gene058411:intron 45.0%
AATGCTAATGAGTGCCCTTG+AGG + chr3.2:3038652-3038671 None:intergenic 45.0%
CAACAGCAAACAGGGTGAAA+TGG - chr3.2:3039981-3040000 MS.gene058411:CDS 45.0%
CAGATAGATCAGAGGCTGAT+CGG + chr3.2:3039511-3039530 None:intergenic 45.0%
CTGGTTCATCAACAGCAAAC+AGG - chr3.2:3039972-3039991 MS.gene058411:CDS 45.0%
GGTGATCCATTCCAAAACAC+TGG - chr3.2:3039728-3039747 MS.gene058411:CDS 45.0%
GTAGTTGTAGCCAACCATGT+TGG + chr3.2:3040076-3040095 None:intergenic 45.0%
TAGGGCTGCATCAGATCTAA+AGG - chr3.2:3039775-3039794 MS.gene058411:CDS 45.0%
TGCATCAGATCTAAAGGCTG+TGG - chr3.2:3039781-3039800 MS.gene058411:CDS 45.0%
TGCTGTTGCAGAGCTATAAG+TGG + chr3.2:3039162-3039181 None:intergenic 45.0%
TGGACTTCACTTCATTGCAC+GGG - chr3.2:3039433-3039452 MS.gene058411:intron 45.0%
TTCGCAAGAAAGCCTTTGGA+TGG - chr3.2:3039674-3039693 MS.gene058411:intron 45.0%
TTCTACCGGTGTGCTATATC+AGG - chr3.2:3039533-3039552 MS.gene058411:intron 45.0%
! ACTTATAGCTCTGCAACAGC+AGG - chr3.2:3039161-3039180 MS.gene058411:CDS 45.0%
! ATGTTAGCTTGGCCATCCAA+AGG + chr3.2:3039689-3039708 None:intergenic 45.0%
! TGTGAGGACCAGCAGTATTT+TGG + chr3.2:3039469-3039488 None:intergenic 45.0%
!! AGCTCTAGAAGTGTTCAAGG+TGG - chr3.2:3039131-3039150 MS.gene058411:CDS 45.0%
!! AGGACCAGCAGTATTTTGGA+AGG + chr3.2:3039465-3039484 None:intergenic 45.0%
!! CTGTTTGCTGTTGATGAACC+AGG + chr3.2:3039974-3039993 None:intergenic 45.0%
!!! ATATTTTTCTATTTAAAATT+TGG - chr3.2:3038474-3038493 MS.gene058411:CDS 5.0%
!!! TATTTTTCTATTTAAAATTT+GGG - chr3.2:3038475-3038494 MS.gene058411:CDS 5.0%
AATGAGTGCCCTTGAGGCAT+TGG + chr3.2:3038646-3038665 None:intergenic 50.0%
ACGTTGTGCATGAGCCATGA+GGG + chr3.2:3039570-3039589 None:intergenic 50.0%
AGTACAAAACCTTCCTGGGC+AGG - chr3.2:3039810-3039829 MS.gene058411:CDS 50.0%
CTTGCTAACCAGTGCTCTGA+GGG - chr3.2:3038499-3038518 MS.gene058411:CDS 50.0%
GAATGGATCACCTCGACCTT+GGG + chr3.2:3039720-3039739 None:intergenic 50.0%
GCAAAATCAGTGTCACCCCA+TGG + chr3.2:3039911-3039930 None:intergenic 50.0%
GGTAGCCTGATATAGCACAC+CGG + chr3.2:3039541-3039560 None:intergenic 50.0%
GTGGTTGCGAAAGATGGTTC+TGG - chr3.2:3038939-3038958 MS.gene058411:intron 50.0%
TCTTGCTAACCAGTGCTCTG+AGG - chr3.2:3038498-3038517 MS.gene058411:CDS 50.0%
AACCATTGCCCTCAGAGCAC+TGG + chr3.2:3038510-3038529 None:intergenic 55.0%
ACGGTTACTGGACTCCTTGC+TGG - chr3.2:3040049-3040068 MS.gene058411:CDS 55.0%
AGGCTACCAAGACACCCTCA+TGG - chr3.2:3039553-3039572 MS.gene058411:intron 55.0%
CATCTCAGCCGCACACTTGA+AGG - chr3.2:3038234-3038253 MS.gene058411:CDS 55.0%
CCAACCATGTTGGTCCAGCA+AGG + chr3.2:3040066-3040085 None:intergenic 55.0%
CCTTGCTGGACCAACATGGT+TGG - chr3.2:3040063-3040082 MS.gene058411:CDS 55.0%
GACGTTGTGCATGAGCCATG+AGG + chr3.2:3039571-3039590 None:intergenic 55.0%
GACTCCTTGCTGGACCAACA+TGG - chr3.2:3040059-3040078 MS.gene058411:CDS 55.0%
GCAAACAGGGTGAAATGGCC+TGG - chr3.2:3039986-3040005 MS.gene058411:CDS 55.0%
GCTAACATGATCACCGCCCA+AGG - chr3.2:3039701-3039720 MS.gene058411:intron 55.0%
GGAATGGATCACCTCGACCT+TGG + chr3.2:3039721-3039740 None:intergenic 55.0%
GGGCGGTGATCATGTTAGCT+TGG + chr3.2:3039700-3039719 None:intergenic 55.0%
TCCTCACAAGGGTCAAGCTG+TGG - chr3.2:3039481-3039500 MS.gene058411:intron 55.0%
!! AACCAGTGCTCTGAGGGCAA+TGG - chr3.2:3038505-3038524 MS.gene058411:CDS 55.0%
!! CATGAGCCATGAGGGTGTCT+TGG + chr3.2:3039562-3039581 None:intergenic 55.0%
AAACCTTCCTGGGCAGGCCT+TGG - chr3.2:3039816-3039835 MS.gene058411:CDS 60.0%
ACCCCATGGAGACCAACCTG+GGG + chr3.2:3039897-3039916 None:intergenic 60.0%
ATGATCACCGCCCAAGGTCG+AGG - chr3.2:3039707-3039726 MS.gene058411:intron 60.0%
ATTGTTGCCAAGGCCTGCCC+AGG + chr3.2:3039826-3039845 None:intergenic 60.0%
CACCCCATGGAGACCAACCT+GGG + chr3.2:3039898-3039917 None:intergenic 60.0%
CTTTAGTGAGCCCCCCAGGT+TGG - chr3.2:3039882-3039901 MS.gene058411:CDS 60.0%
GACACTTTAGTGAGCCCCCC+AGG - chr3.2:3039878-3039897 MS.gene058411:CDS 60.0%
GCCACAGCTTGACCCTTGTG+AGG + chr3.2:3039485-3039504 None:intergenic 60.0%
TCACCCCATGGAGACCAACC+TGG + chr3.2:3039899-3039918 None:intergenic 60.0%
TGGATCACCTCGACCTTGGG+CGG + chr3.2:3039717-3039736 None:intergenic 60.0%
CCCATGGAGACCAACCTGGG+GGG + chr3.2:3039895-3039914 None:intergenic 65.0%
CCCCATGGAGACCAACCTGG+GGG + chr3.2:3039896-3039915 None:intergenic 65.0%
TTGCCAAGGCCTGCCCAGGA+AGG + chr3.2:3039822-3039841 None:intergenic 65.0%
!! CCCCCAGGTTGGTCTCCATG+GGG - chr3.2:3039893-3039912 MS.gene058411:CDS 65.0%
!! CCCCCCAGGTTGGTCTCCAT+GGG - chr3.2:3039892-3039911 MS.gene058411:CDS 65.0%
!! GCCCCCCAGGTTGGTCTCCA+TGG - chr3.2:3039891-3039910 MS.gene058411:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 3038051 3040120 3038051 ID=MS.gene058411
chr3.2 mRNA 3038051 3040120 3038051 ID=MS.gene058411.t1;Parent=MS.gene058411
chr3.2 exon 3039715 3040120 3039715 ID=MS.gene058411.t1.exon1;Parent=MS.gene058411.t1
chr3.2 CDS 3039715 3040120 3039715 ID=cds.MS.gene058411.t1;Parent=MS.gene058411.t1
chr3.2 exon 3038989 3039318 3038989 ID=MS.gene058411.t1.exon2;Parent=MS.gene058411.t1
chr3.2 CDS 3038989 3039318 3038989 ID=cds.MS.gene058411.t1;Parent=MS.gene058411.t1
chr3.2 exon 3038051 3038745 3038051 ID=MS.gene058411.t1.exon3;Parent=MS.gene058411.t1
chr3.2 CDS 3038051 3038745 3038051 ID=cds.MS.gene058411.t1;Parent=MS.gene058411.t1
Gene Sequence

>MS.gene058411

ATGAACAATCATTTCAAACTCAAACATAGAGTTGAATTCAGGGAAATGCTTGTTCAATTAGCCTTAAAACAAGCTCTTACAATGCAAAAAGAAGCACAAGAAAATTCTCAACACCAACAAAACTCATCAGTGCATAAAACGGTTCATGGTGATTGTTTGAAGCTATTTGAAAACACAATTTTTCATCTCAGCCGCACACTTGAAGGCTTAAACAATGCAAGCAAAAATTGTTCACCAAATGATGCACAAACATGGCTCACAACTTCTCTCACAAATATTGAAACATGTAAAAGTGGAGCTTTAGAACTCAATGCTCAAGATTTCAATTTCATTATGCAAACCAATGTCATTGAGATGATAAGGAACATCTTAGCCATCAATATGCATTTCATGAAACATGACAAAGGTACTAACAATGATTTTATATTTTTCTATTTAAAATTTGGGTCTTGCTAACCAGTGCTCTGAGGGCAATGGTTAATGCTAAGAATCCATTAGTAGAAATTATGTCTTGGAAACGTAAGTTTTTACATTTGTTTTAGCAATAATTACACAACTTTTTGATGCAAAGTTACTTATTTTAGTACTTTAACCAATGCCTCAAGGGCACTCATTAGCATTCCCCTTAAAATTTAAGTATTGTACTGCTAAAAAATAATTCAATAACTTTATTTAGGAGGAATTAAATGAGAGATAAATTATTGAATGTTTATTTGGTGACATATATATATATATATATATATATATATATATATATATATATATATAGTCATACTGATCTAAATTTCTGAATCTGTTGCAGAAACAAAAGAAGAGTCATTTCCAAATTGGTTTTCTGTTCATGAAAGGAAGCTTTTGCAGTCCAAGTCTCCAGTAAAGTACAATCTTGTGGTTGCGAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTTTAAATGCTGCTGCTAAGAGAAAATACAGGACAAGGTTTGTGATACATGTTAAGAAAGGTGTTTATAGAGAGAACATTGAGGTTGCTGTTCATAATGATAACATTATGTTGGTTGGTGATGGAATGCAAAATACTATAATAACAAGCTCTAGAAGTGTTCAAGGTGGTTTTACCACTTATAGCTCTGCAACAGCAGGTGAGTTATATTCAATCTCCTTTCTCTTTTTATTTTCTTGTTATTAAAGAAATAAAATTAAATAGTGTCAAGTCAACTACTGAACATAGAAGATATAAAATAATTTCTTTGGTAAAATTTTATTTTATCTTTGAAGCTCTAAAATTTTATAATAAGATAGGTGTTTAATATTTCTTTGCGGCTTTCTTACATACAATTACTTTCATTTTTTAAAATAATCACTCTTGGATCATTTAAATTTAGGTATTGATGGACTTCACTTCATTGCACGGGACATAACCTTCCAAAATACTGCTGGTCCTCACAAGGGTCAAGCTGTGGCGCTCCGATCAGCCTCTGATCTATCTGTCTTCTACCGGTGTGCTATATCAGGCTACCAAGACACCCTCATGGCTCATGCACAACGTCAATTTTACAGACAATGTTTCATTTATGGCACTGTAGACTTCATATTTGGCAATGCCGCAGTTGTATTCCAAAACTGTAACATTTTCGCAAGAAAGCCTTTGGATGGCCAAGCTAACATGATCACCGCCCAAGGTCGAGGTGATCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGGCTGTGGTTGACAAGTACAAAACCTTCCTGGGCAGGCCTTGGCAACAATATTCAAGAGTTATGGTGATGAAAACTTTTATGGACACTTTAGTGAGCCCCCCAGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGATACATTGTATTATGGAGAGTATGAGAATTATGGACCTGGTTCATCAACAGCAAACAGGGTGAAATGGCCTGGTTATCATGTGATAACAAACCCTAAGGAAGCATCAAAGTTTACGGTTACTGGACTCCTTGCTGGACCAACATGGTTGGCTACAACTACTGTGCCATTTACATCTGGTCTTTGA
Protein sequence

>MS.gene058411.t1

MNNHFKLKHRVEFREMLVQLALKQALTMQKEAQENSQHQQNSSVHKTVHGDCLKLFENTIFHLSRTLEGLNNASKNCSPNDAQTWLTTSLTNIETCKSGALELNAQDFNFIMQTNVIEMIRNILAINMHFMKHDKETKEESFPNWFSVHERKLLQSKSPVKYNLVVAKDGSGQYKTVQAALNAAAKRKYRTRFVIHVKKGVYRENIEVAVHNDNIMLVGDGMQNTIITSSRSVQGGFTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKAVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPPGWSPWGDTDFAQDTLYYGEYENYGPGSSTANRVKWPGYHVITNPKEASKFTVTGLLAGPTWLATTTVPFTSGL