Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07088.t1 | NP_001341006.1 | 100 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 8.10E-98 | 366.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07088.t1 | O48920 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.7e-100 | 364.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07088.t1 | A0A5D2G2X1 | 100.0 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 5.9e-98 | 366.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene07088 | 0.800826 | 1.20E-48 | -1.69E-46 |
| MS.gene049178 | MS.gene07088 | 0.842181 | 3.02E-58 | -1.69E-46 |
| MS.gene049208 | MS.gene07088 | 0.834669 | 2.62E-56 | -1.69E-46 |
| MS.gene049756 | MS.gene07088 | 0.807292 | 5.43E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene07088 | 0.827579 | 1.45E-54 | -1.69E-46 |
| MS.gene04984 | MS.gene07088 | 0.813925 | 2.00E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene07088 | 0.860795 | 1.61E-63 | -1.69E-46 |
| MS.gene050288 | MS.gene07088 | 0.814207 | 1.73E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene07088 | 0.824111 | 9.63E-54 | -1.69E-46 |
| MS.gene050320 | MS.gene07088 | 0.811104 | 8.27E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene07088 | 0.913979 | 3.28E-84 | -1.69E-46 |
| MS.gene050838 | MS.gene07088 | 0.83085 | 2.33E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene07088 | 0.80873 | 2.68E-50 | -1.69E-46 |
| MS.gene051063 | MS.gene07088 | 0.835304 | 1.81E-56 | -1.69E-46 |
| MS.gene051245 | MS.gene07088 | 0.822943 | 1.81E-53 | -1.69E-46 |
| MS.gene051676 | MS.gene07088 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene051746 | MS.gene07088 | 0.831528 | 1.59E-55 | -1.69E-46 |
| MS.gene051748 | MS.gene07088 | 0.847185 | 1.36E-59 | -1.69E-46 |
| MS.gene051756 | MS.gene07088 | 0.83104 | 2.09E-55 | -1.69E-46 |
| MS.gene051757 | MS.gene07088 | 0.828128 | 1.07E-54 | -1.69E-46 |
| MS.gene051903 | MS.gene07088 | 0.817683 | 2.90E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene07088 | 0.820628 | 6.20E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene07088 | 0.824579 | 7.48E-54 | -1.69E-46 |
| MS.gene052856 | MS.gene07088 | 0.81556 | 8.69E-52 | -1.69E-46 |
| MS.gene053109 | MS.gene07088 | 0.820114 | 8.14E-53 | -1.69E-46 |
| MS.gene053381 | MS.gene07088 | 0.822958 | 1.79E-53 | -1.69E-46 |
| MS.gene053677 | MS.gene07088 | 0.802971 | 4.36E-49 | -1.69E-46 |
| MS.gene053786 | MS.gene07088 | 0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene07088 | 0.852445 | 4.60E-61 | -1.69E-46 |
| MS.gene055313 | MS.gene07088 | 0.854799 | 9.68E-62 | -1.69E-46 |
| MS.gene055314 | MS.gene07088 | 0.855722 | 5.21E-62 | -1.69E-46 |
| MS.gene055603 | MS.gene07088 | 0.845038 | 5.21E-59 | -1.69E-46 |
| MS.gene055780 | MS.gene07088 | 0.80601 | 1.01E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene07088 | 0.821302 | 4.34E-53 | -1.69E-46 |
| MS.gene056432 | MS.gene07088 | 0.810475 | 1.13E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene07088 | 0.810152 | 1.33E-50 | -1.69E-46 |
| MS.gene056638 | MS.gene07088 | 0.848541 | 5.74E-60 | -1.69E-46 |
| MS.gene056752 | MS.gene07088 | 0.831012 | 2.12E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene07088 | 0.815652 | 8.28E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene07088 | 0.835597 | 1.53E-56 | -1.69E-46 |
| MS.gene057094 | MS.gene07088 | 0.834807 | 2.42E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene07088 | 0.801633 | 8.21E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene07088 | 0.853282 | 2.65E-61 | -1.69E-46 |
| MS.gene057452 | MS.gene07088 | -0.829021 | 6.50E-55 | -1.69E-46 |
| MS.gene057999 | MS.gene07088 | 0.802537 | 5.35E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene07088 | 0.802227 | 6.20E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene07088 | 0.804512 | 2.08E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene07088 | 0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene058639 | MS.gene07088 | 0.819898 | 9.12E-53 | -1.69E-46 |
| MS.gene058646 | MS.gene07088 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene07088 | 0.83043 | 2.95E-55 | -1.69E-46 |
| MS.gene058758 | MS.gene07088 | 0.813903 | 2.02E-51 | -1.69E-46 |
| MS.gene058852 | MS.gene07088 | 0.822059 | 2.90E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene07088 | 0.829575 | 4.77E-55 | -1.69E-46 |
| MS.gene059018 | MS.gene07088 | 0.804509 | 2.09E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene07088 | 0.845582 | 3.71E-59 | -1.69E-46 |
| MS.gene059227 | MS.gene07088 | 0.814338 | 1.62E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene07088 | 0.836835 | 7.41E-57 | -1.69E-46 |
| MS.gene06010 | MS.gene07088 | 0.831246 | 1.86E-55 | -1.69E-46 |
| MS.gene06011 | MS.gene07088 | 0.851905 | 6.54E-61 | -1.69E-46 |
| MS.gene060869 | MS.gene07088 | 0.87421 | 8.07E-68 | -1.69E-46 |
| MS.gene060870 | MS.gene07088 | 0.84562 | 3.63E-59 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07088.t1 | MTR_7g109960 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 4.29e-135 | 375 |
| MS.gene07088.t1 | MTR_6g005820 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.83e-135 | 374 |
| MS.gene07088.t1 | MTR_1g086480 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 9.77e-135 | 374 |
| MS.gene07088.t1 | MTR_5g034130 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.65e-134 | 373 |
| MS.gene07088.t1 | MTR_5g034125 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.65e-134 | 373 |
| MS.gene07088.t1 | MTR_5g016540 | 86.111 | 180 | 25 | 0 | 1 | 180 | 1 | 180 | 2.07e-119 | 335 |
| MS.gene07088.t1 | MTR_4g128910 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 1.71e-84 | 247 |
| MS.gene07088.t1 | MTR_5g007810 | 61.582 | 177 | 68 | 0 | 1 | 177 | 1 | 177 | 6.89e-83 | 243 |
| MS.gene07088.t1 | MTR_4g077640 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 1.17e-80 | 238 |
| MS.gene07088.t1 | MTR_5g007820 | 55.495 | 182 | 79 | 1 | 1 | 180 | 1 | 182 | 9.18e-76 | 225 |
| MS.gene07088.t1 | MTR_1g076550 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.62e-67 | 204 |
| MS.gene07088.t1 | MTR_5g007840 | 42.723 | 213 | 77 | 2 | 1 | 180 | 1 | 201 | 2.24e-57 | 179 |
| MS.gene07088.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 2.83e-50 | 160 |
| MS.gene07088.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 43 | 206 | 4.76e-50 | 160 |
| MS.gene07088.t1 | MTR_2g022200 | 34.831 | 178 | 105 | 2 | 5 | 173 | 5 | 180 | 4.60e-37 | 127 |
| MS.gene07088.t1 | MTR_5g078090 | 34.659 | 176 | 112 | 2 | 1 | 173 | 1 | 176 | 4.00e-31 | 111 |
| MS.gene07088.t1 | MTR_5g015370 | 32.609 | 184 | 121 | 2 | 1 | 181 | 1 | 184 | 1.39e-30 | 110 |
| MS.gene07088.t1 | MTR_8g077540 | 51.020 | 98 | 46 | 2 | 18 | 114 | 17 | 113 | 1.57e-28 | 103 |
| MS.gene07088.t1 | MTR_4g026950 | 31.707 | 164 | 111 | 1 | 18 | 180 | 1 | 164 | 2.22e-26 | 99.0 |
| MS.gene07088.t1 | MTR_2g034640 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.12e-24 | 95.1 |
| MS.gene07088.t1 | MTR_7g112090 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 3.22e-24 | 94.0 |
| MS.gene07088.t1 | MTR_4g121860 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 7.47e-23 | 90.5 |
| MS.gene07088.t1 | MTR_1g062760 | 34.118 | 85 | 52 | 1 | 18 | 98 | 15 | 99 | 2.87e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07088.t1 | AT1G10630 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 8.87e-135 | 374 |
| MS.gene07088.t1 | AT1G10630 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 8.87e-135 | 374 |
| MS.gene07088.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene07088.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene07088.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene07088.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.78e-134 | 373 |
| MS.gene07088.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.78e-134 | 373 |
| MS.gene07088.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT1G23490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene07088.t1 | AT5G14670 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.46e-133 | 370 |
| MS.gene07088.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene07088.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene07088.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene07088.t1 | AT2G15310 | 66.851 | 181 | 60 | 0 | 1 | 181 | 1 | 181 | 1.94e-90 | 263 |
| MS.gene07088.t1 | AT2G24765 | 62.011 | 179 | 68 | 0 | 1 | 179 | 1 | 179 | 5.73e-85 | 248 |
| MS.gene07088.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 2.40e-81 | 239 |
| MS.gene07088.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 2.40e-81 | 239 |
| MS.gene07088.t1 | AT3G03120 | 59.887 | 177 | 71 | 0 | 1 | 177 | 1 | 177 | 1.05e-80 | 238 |
| MS.gene07088.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.11e-70 | 212 |
| MS.gene07088.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.11e-70 | 212 |
| MS.gene07088.t1 | AT2G24765 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.36e-60 | 185 |
| MS.gene07088.t1 | AT3G03120 | 62.308 | 130 | 49 | 0 | 1 | 130 | 1 | 130 | 1.12e-59 | 182 |
| MS.gene07088.t1 | AT1G02430 | 48.936 | 188 | 82 | 5 | 1 | 176 | 1 | 186 | 6.85e-57 | 177 |
| MS.gene07088.t1 | AT1G02440 | 45.699 | 186 | 91 | 4 | 1 | 176 | 1 | 186 | 2.32e-55 | 173 |
| MS.gene07088.t1 | AT2G18390 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 1.06e-49 | 159 |
| MS.gene07088.t1 | AT1G02430 | 47.205 | 161 | 75 | 4 | 1 | 153 | 1 | 159 | 3.51e-45 | 147 |
| MS.gene07088.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.50e-36 | 124 |
| MS.gene07088.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.50e-36 | 124 |
| MS.gene07088.t1 | AT3G49870 | 33.880 | 183 | 118 | 2 | 1 | 180 | 1 | 183 | 7.32e-33 | 116 |
| MS.gene07088.t1 | AT5G67560 | 33.742 | 163 | 107 | 1 | 12 | 173 | 14 | 176 | 2.31e-31 | 112 |
| MS.gene07088.t1 | AT5G37680 | 33.523 | 176 | 114 | 2 | 1 | 173 | 1 | 176 | 1.85e-30 | 110 |
| MS.gene07088.t1 | AT3G49870 | 32.927 | 164 | 109 | 1 | 18 | 180 | 1 | 164 | 1.71e-29 | 107 |
| MS.gene07088.t1 | AT3G49860 | 33.133 | 166 | 110 | 1 | 16 | 180 | 10 | 175 | 7.02e-29 | 105 |
| MS.gene07088.t1 | AT1G02440 | 33.117 | 154 | 67 | 3 | 1 | 153 | 1 | 119 | 3.32e-26 | 97.4 |
| MS.gene07088.t1 | AT1G09180 | 32.961 | 179 | 104 | 2 | 13 | 177 | 16 | 192 | 3.66e-25 | 96.7 |
| MS.gene07088.t1 | AT3G62560 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.44e-24 | 95.1 |
| MS.gene07088.t1 | AT5G37680 | 32.812 | 128 | 86 | 0 | 46 | 173 | 2 | 129 | 4.18e-24 | 92.4 |
| MS.gene07088.t1 | AT1G56330 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 5.75e-24 | 93.6 |
| MS.gene07088.t1 | AT4G02080 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 6.33e-24 | 93.6 |
Find 45 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTAGATCCGTCCTTTA+TGG | 0.101427 | 7.2:-6255175 | MS.gene07088:intron |
| TTTCCTTCTTCGCAAATAAC+CGG | 0.361975 | 7.2:+6257720 | None:intergenic |
| TGAAAGTAATGTCTCCATAA+AGG | 0.367407 | 7.2:+6255161 | None:intergenic |
| GAAGGAAATGCGTATACTTA+TGG | 0.381963 | 7.2:-6257705 | MS.gene07088:CDS |
| TCAGCAGCATTCATAGCATT+TGG | 0.385055 | 7.2:+6254891 | None:intergenic |
| CAGCCGGTTATTTGCGAAGA+AGG | 0.398980 | 7.2:-6257723 | MS.gene07088:CDS |
| ATTCTTTATAAGCTCAAGCT+TGG | 0.418391 | 7.2:-6257653 | MS.gene07088:CDS |
| CAGAGGTAGCACATGTGCTC+TGG | 0.443544 | 7.2:+6254725 | None:intergenic |
| ATTCACTTCGTCAGCGTCAC+TGG | 0.458451 | 7.2:-6254845 | MS.gene07088:intron |
| AGCTTTACTGTGTGGGATGT+TGG | 0.474274 | 7.2:-6257164 | MS.gene07088:CDS |
| CTCAAACAACATTGCAAGCA+AGG | 0.495880 | 7.2:-6254671 | MS.gene07088:intron |
| AAGCTTGAGCTTATAAAGAA+TGG | 0.497488 | 7.2:+6257655 | None:intergenic |
| GTCACCACCATTCCCACCAT+TGG | 0.507944 | 7.2:-6257623 | MS.gene07088:intron |
| ATTGTAAAACTTACCAATGG+TGG | 0.508835 | 7.2:+6257610 | None:intergenic |
| AAGCTAGGGACGAGCTGCAC+AGG | 0.511385 | 7.2:-6255082 | MS.gene07088:CDS |
| TGTGTGGGATGTTGGTGGCC+AGG | 0.523027 | 7.2:-6257156 | MS.gene07088:CDS |
| CAGAGCACATGTGCTACCTC+TGG | 0.523931 | 7.2:-6254724 | MS.gene07088:CDS |
| GAACATTAGCTTTACTGTGT+GGG | 0.534133 | 7.2:-6257171 | MS.gene07088:CDS |
| TTTACTGTGTGGGATGTTGG+TGG | 0.540094 | 7.2:-6257161 | MS.gene07088:CDS |
| AAATAACCGGCTGAATAGCT+TGG | 0.543563 | 7.2:+6257733 | None:intergenic |
| AATATAGAAATACCTTGTCC+TGG | 0.547425 | 7.2:+6257138 | None:intergenic |
| GCTGAAATAACTGATAAGCT+AGG | 0.555145 | 7.2:-6254873 | MS.gene07088:CDS |
| AGATCGTGTTGTTGAAGCTA+GGG | 0.564599 | 7.2:-6255096 | MS.gene07088:CDS |
| GGATGTTGGTGGCCAGGACA+AGG | 0.567218 | 7.2:-6257150 | MS.gene07088:intron |
| AAACTTACCAATGGTGGGAA+TGG | 0.569667 | 7.2:+6257616 | None:intergenic |
| TAGCTTCAACAACACGATCT+CGG | 0.576560 | 7.2:+6255099 | None:intergenic |
| CATTCACCAAGCTATTCAGC+CGG | 0.576922 | 7.2:-6257739 | MS.gene07088:CDS |
| GAGATCGTGTTGTTGAAGCT+AGG | 0.579112 | 7.2:-6255097 | MS.gene07088:CDS |
| ATGGTCGGTCTCGATGCCGC+TGG | 0.579718 | 7.2:-6257686 | MS.gene07088:CDS |
| TTGTAAAACTTACCAATGGT+GGG | 0.580371 | 7.2:+6257611 | None:intergenic |
| ATATGGTGTAGGGTTTAATG+TGG | 0.582346 | 7.2:-6257210 | MS.gene07088:intron |
| CATTACTTTCAAAATACACA+AGG | 0.584201 | 7.2:-6255149 | MS.gene07088:CDS |
| TCTGGTGAAGGACTTTATGA+AGG | 0.585343 | 7.2:-6254706 | MS.gene07088:CDS |
| ACATGTGCTACCTCTGGTGA+AGG | 0.597179 | 7.2:-6254718 | MS.gene07088:CDS |
| GACTTTATGAAGGACTAGAC+TGG | 0.599016 | 7.2:-6254696 | MS.gene07088:CDS |
| CTTGAGCTTATAAAGAATGG+TGG | 0.605632 | 7.2:+6257658 | None:intergenic |
| AGTAATGTCTCCATAAAGGA+CGG | 0.609070 | 7.2:+6255165 | None:intergenic |
| CTTACCAATGGTGGGAATGG+TGG | 0.612027 | 7.2:+6257619 | None:intergenic |
| AGGGTTTAATGTGGAAACTG+TGG | 0.625050 | 7.2:-6257201 | MS.gene07088:CDS |
| TTCATAAAGTCCTTCACCAG+AGG | 0.636014 | 7.2:+6254708 | None:intergenic |
| AGAACATTAGCTTTACTGTG+TGG | 0.640151 | 7.2:-6257172 | MS.gene07088:CDS |
| GAAATGCGTATACTTATGGT+CGG | 0.647571 | 7.2:-6257701 | MS.gene07088:CDS |
| ATTACTTTCAAAATACACAA+GGG | 0.655008 | 7.2:-6255148 | MS.gene07088:CDS |
| AAGAATGGTGGTCTTACCAG+CGG | 0.678797 | 7.2:+6257670 | None:intergenic |
| GCTGCACAGGATGTTAAACG+AGG | 0.784396 | 7.2:-6255069 | MS.gene07088:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGATTATTAACAAATATT+AGG | + | chr7.2:6256606-6256625 | None:intergenic | 15.0% |
| !! | ATAACTCAGATAAAAATATA+TGG | + | chr7.2:6257085-6257104 | None:intergenic | 15.0% |
| !! | GATTTACAAATTATGTTATA+AGG | - | chr7.2:6256036-6256055 | MS.gene07088:intron | 15.0% |
| !!! | ATTAAATTTTAATGTGCATT+GGG | + | chr7.2:6256939-6256958 | None:intergenic | 15.0% |
| !!! | TTTTGATGATATAGATTATA+TGG | - | chr7.2:6255089-6255108 | MS.gene07088:CDS | 15.0% |
| !! | AGATAAAAATATATGGTTAG+AGG | + | chr7.2:6257078-6257097 | None:intergenic | 20.0% |
| !! | ATTACTTTCAAAATACACAA+GGG | - | chr7.2:6257168-6257187 | MS.gene07088:CDS | 20.0% |
| !! | ATTATAAAACTAGTTACAGT+AGG | - | chr7.2:6255386-6255405 | MS.gene07088:intron | 20.0% |
| !! | GAATGTATTATTGATAGAAA+AGG | + | chr7.2:6256263-6256282 | None:intergenic | 20.0% |
| !! | TCAAAACAAAATATGTATCT+TGG | + | chr7.2:6256691-6256710 | None:intergenic | 20.0% |
| !! | TTATACTAAATAGCATATCA+CGG | + | chr7.2:6255541-6255560 | None:intergenic | 20.0% |
| !!! | GATTAAATTTTAATGTGCAT+TGG | + | chr7.2:6256940-6256959 | None:intergenic | 20.0% |
| !!! | TATTTTGTTATTTGTTTTGC+AGG | - | chr7.2:6257744-6257763 | MS.gene07088:CDS | 20.0% |
| !!! | TCATTGTTTTTATTTTTGCT+TGG | - | chr7.2:6256539-6256558 | MS.gene07088:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+TGG | + | chr7.2:6254794-6254813 | None:intergenic | 20.0% |
| ! | AAAAGAGATAAATCTCTCTT+TGG | + | chr7.2:6256120-6256139 | None:intergenic | 25.0% |
| ! | AAATAGGATGATGATTCAAT+GGG | + | chr7.2:6255893-6255912 | None:intergenic | 25.0% |
| ! | AAATGAGTGAAATGACAAAT+AGG | + | chr7.2:6255909-6255928 | None:intergenic | 25.0% |
| ! | AACCATTGTTCTGTTATAAA+AGG | + | chr7.2:6255450-6255469 | None:intergenic | 25.0% |
| ! | AACTCTGCAATTTAAATTAC+AGG | - | chr7.2:6257693-6257712 | MS.gene07088:CDS | 25.0% |
| ! | AATGAATGAATGTGAGAATT+TGG | - | chr7.2:6257287-6257306 | MS.gene07088:intron | 25.0% |
| ! | ACTCTTATGTTTATGAATGT+TGG | - | chr7.2:6256988-6257007 | MS.gene07088:intron | 25.0% |
| ! | ATCCTAAACCAATTATACAT+AGG | - | chr7.2:6256957-6256976 | MS.gene07088:intron | 25.0% |
| ! | ATGTTGTGAAACAATCATTA+AGG | - | chr7.2:6256426-6256445 | MS.gene07088:intron | 25.0% |
| ! | CAATTCCTTTCTATAAACAA+TGG | - | chr7.2:6254725-6254744 | MS.gene07088:CDS | 25.0% |
| ! | CATTACCATTGTTTATAGAA+AGG | + | chr7.2:6254733-6254752 | None:intergenic | 25.0% |
| ! | CATTACTTTCAAAATACACA+AGG | - | chr7.2:6257167-6257186 | MS.gene07088:CDS | 25.0% |
| ! | GATATAGATTATATGGTGTA+GGG | - | chr7.2:6255096-6255115 | MS.gene07088:CDS | 25.0% |
| ! | GTAATGATAATTATGAAGCA+CGG | - | chr7.2:6254747-6254766 | MS.gene07088:intron | 25.0% |
| ! | GTTCTATCGTAAACTATAAT+TGG | + | chr7.2:6256454-6256473 | None:intergenic | 25.0% |
| ! | TAGTTTACGATAGAACATTA+TGG | - | chr7.2:6256458-6256477 | MS.gene07088:intron | 25.0% |
| ! | TCAAATATTAGAAGCTATAG+TGG | - | chr7.2:6255568-6255587 | MS.gene07088:intron | 25.0% |
| ! | TCTATGGTTATAATATTGTC+AGG | - | chr7.2:6257352-6257371 | MS.gene07088:intron | 25.0% |
| ! | TGATATAGATTATATGGTGT+AGG | - | chr7.2:6255095-6255114 | MS.gene07088:CDS | 25.0% |
| ! | TTATACCAAATAGCATATCA+CGG | + | chr7.2:6255646-6255665 | None:intergenic | 25.0% |
| !! | ATTTAGATTTTATCCCAGAT+AGG | + | chr7.2:6256357-6256376 | None:intergenic | 25.0% |
| !! | CTAAATTATGTCAAACCTTT+TGG | - | chr7.2:6257498-6257517 | MS.gene07088:intron | 25.0% |
| !! | CTATATTTGTGTGTATGTTT+TGG | - | chr7.2:6255194-6255213 | MS.gene07088:intron | 25.0% |
| !! | TAATAAGAAAAGCATATCGA+TGG | + | chr7.2:6257128-6257147 | None:intergenic | 25.0% |
| !! | TATTAGTTTCATTCCTATCT+GGG | - | chr7.2:6256341-6256360 | MS.gene07088:intron | 25.0% |
| !! | TGATTTTATGATATGACGAT+TGG | - | chr7.2:6255266-6255285 | MS.gene07088:intron | 25.0% |
| !!! | GCTACTCTGTTTTTATTTAT+GGG | - | chr7.2:6255303-6255322 | MS.gene07088:intron | 25.0% |
| !!! | TCACATGACTTGTTAAATTA+TGG | - | chr7.2:6256896-6256915 | MS.gene07088:intron | 25.0% |
| !!! | TTCGCTTGTTATCTTAATTT+TGG | - | chr7.2:6256280-6256299 | MS.gene07088:intron | 25.0% |
| AAACCAGATACAATCTGAAA+AGG | - | chr7.2:6255002-6255021 | MS.gene07088:intron | 30.0% | |
| AACCAGATACAATCTGAAAA+GGG | - | chr7.2:6255003-6255022 | MS.gene07088:intron | 30.0% | |
| AAGCTTGAGCTTATAAAGAA+TGG | + | chr7.2:6254664-6254683 | None:intergenic | 30.0% | |
| AATATAGAAATACCTTGTCC+TGG | + | chr7.2:6255181-6255200 | None:intergenic | 30.0% | |
| AATCATTATCCAACTAAGTG+GGG | + | chr7.2:6256507-6256526 | None:intergenic | 30.0% | |
| AATTGGAAAATGGAGGAAAT+TGG | - | chr7.2:6256002-6256021 | MS.gene07088:intron | 30.0% | |
| AGAAAGCAATCAGAAAATCA+AGG | + | chr7.2:6257335-6257354 | None:intergenic | 30.0% | |
| AGAAGATGCCTATGTATAAT+TGG | + | chr7.2:6256968-6256987 | None:intergenic | 30.0% | |
| AGGATTCAAATTGAGAAGTA+TGG | - | chr7.2:6255956-6255975 | MS.gene07088:intron | 30.0% | |
| AGTGATTGTAGTGTCAATTA+AGG | - | chr7.2:6256819-6256838 | MS.gene07088:intron | 30.0% | |
| ATAGAACAAGTAGATGAGAA+TGG | + | chr7.2:6257557-6257576 | None:intergenic | 30.0% | |
| ATTCTCACATTCATTCATTG+AGG | + | chr7.2:6257286-6257305 | None:intergenic | 30.0% | |
| ATTCTTTATAAGCTCAAGCT+TGG | - | chr7.2:6254663-6254682 | MS.gene07088:intron | 30.0% | |
| ATTGGAAAATGGAGGAAATT+GGG | - | chr7.2:6256003-6256022 | MS.gene07088:intron | 30.0% | |
| ATTGTAAAACTTACCAATGG+TGG | + | chr7.2:6254709-6254728 | None:intergenic | 30.0% | |
| CAAACATGCTAGAATTTACT+AGG | - | chr7.2:6256629-6256648 | MS.gene07088:intron | 30.0% | |
| CAAATAGGATGATGATTCAA+TGG | + | chr7.2:6255894-6255913 | None:intergenic | 30.0% | |
| CAATCAGAAAATCAAGGTAT+AGG | + | chr7.2:6257329-6257348 | None:intergenic | 30.0% | |
| CAATCATTATCCAACTAAGT+GGG | + | chr7.2:6256508-6256527 | None:intergenic | 30.0% | |
| CATTGTTCTGTTATAAAAGG+TGG | + | chr7.2:6255447-6255466 | None:intergenic | 30.0% | |
| CTAGTAAATTCTAGCATGTT+TGG | + | chr7.2:6256631-6256650 | None:intergenic | 30.0% | |
| CTTTGCTTATAATAGTGACT+GGG | + | chr7.2:6254926-6254945 | None:intergenic | 30.0% | |
| GGAATTGTAAAACTTACCAA+TGG | + | chr7.2:6254712-6254731 | None:intergenic | 30.0% | |
| TAGAACATTATGGCGTAATT+TGG | - | chr7.2:6256468-6256487 | MS.gene07088:intron | 30.0% | |
| TAGAGGTGAAATGAAAGATA+AGG | - | chr7.2:6255336-6255355 | MS.gene07088:intron | 30.0% | |
| TAGATCAAAACTAAGCACTA+TGG | + | chr7.2:6256792-6256811 | None:intergenic | 30.0% | |
| TAGGAATGAAACTAATAGCA+AGG | + | chr7.2:6256338-6256357 | None:intergenic | 30.0% | |
| TCTTTGCTTATAATAGTGAC+TGG | + | chr7.2:6254927-6254946 | None:intergenic | 30.0% | |
| TGAAAGTAATGTCTCCATAA+AGG | + | chr7.2:6257158-6257177 | None:intergenic | 30.0% | |
| TTAGTTGGATAATGATTGGT+TGG | - | chr7.2:6256510-6256529 | MS.gene07088:intron | 30.0% | |
| TTATGTTTATGAATGTTGGC+TGG | - | chr7.2:6256992-6257011 | MS.gene07088:intron | 30.0% | |
| TTGTAAAACTTACCAATGGT+GGG | + | chr7.2:6254708-6254727 | None:intergenic | 30.0% | |
| TTTGCTTATAATAGTGACTG+GGG | + | chr7.2:6254925-6254944 | None:intergenic | 30.0% | |
| ! | ATATGACGATTGGTTGAAAT+TGG | - | chr7.2:6255276-6255295 | MS.gene07088:intron | 30.0% |
| ! | CACCTTTTATAACAGAACAA+TGG | - | chr7.2:6255445-6255464 | MS.gene07088:intron | 30.0% |
| ! | CTATTAGTTTCATTCCTATC+TGG | - | chr7.2:6256340-6256359 | MS.gene07088:intron | 30.0% |
| ! | CTTTTCTGTTAGAACTGTAA+AGG | - | chr7.2:6256090-6256109 | MS.gene07088:intron | 30.0% |
| ! | GAGAGATTTATCTCTTTTTG+AGG | - | chr7.2:6256122-6256141 | MS.gene07088:intron | 30.0% |
| ! | GATTTTCTGATTGCTTTCTA+TGG | - | chr7.2:6257336-6257355 | MS.gene07088:intron | 30.0% |
| ! | GGATTCAAATTGAGAAGTAT+GGG | - | chr7.2:6255957-6255976 | MS.gene07088:intron | 30.0% |
| ! | TGCCTATGTATAATTGGTTT+AGG | + | chr7.2:6256962-6256981 | None:intergenic | 30.0% |
| !!! | CAGAGAGAGTATTTTATCAA+GGG | - | chr7.2:6255048-6255067 | MS.gene07088:intron | 30.0% |
| !!! | GGCTACTCTGTTTTTATTTA+TGG | - | chr7.2:6255302-6255321 | MS.gene07088:intron | 30.0% |
| AAATTAAGGAGACGACCAAA+AGG | + | chr7.2:6257516-6257535 | None:intergenic | 35.0% | |
| AATGTCTGAGAGTAATGCAA+GGG | + | chr7.2:6255867-6255886 | None:intergenic | 35.0% | |
| AGTAATGTCTCCATAAAGGA+CGG | + | chr7.2:6257154-6257173 | None:intergenic | 35.0% | |
| ATATGGTGTAGGGTTTAATG+TGG | - | chr7.2:6255106-6255125 | MS.gene07088:CDS | 35.0% | |
| ATGCAAGGGTTATCCAAAAT+AGG | + | chr7.2:6255853-6255872 | None:intergenic | 35.0% | |
| ATGGTTAGAGGTCAAAAGTA+AGG | + | chr7.2:6257066-6257085 | None:intergenic | 35.0% | |
| CACGGATGGACAATTATATA+CGG | - | chr7.2:6254765-6254784 | MS.gene07088:intron | 35.0% | |
| CCAATCATTATCCAACTAAG+TGG | + | chr7.2:6256509-6256528 | None:intergenic | 35.0% | |
| CCACTTAGTTGGATAATGAT+TGG | - | chr7.2:6256506-6256525 | MS.gene07088:intron | 35.0% | |
| CCTTGATAAAATACTCTCTC+TGG | + | chr7.2:6255050-6255069 | None:intergenic | 35.0% | |
| CTTATTAGATCCGTCCTTTA+TGG | - | chr7.2:6257141-6257160 | MS.gene07088:intron | 35.0% | |
| CTTGAGCTTATAAAGAATGG+TGG | + | chr7.2:6254661-6254680 | None:intergenic | 35.0% | |
| GAAATGCGTATACTTATGGT+CGG | - | chr7.2:6254615-6254634 | MS.gene07088:intron | 35.0% | |
| GAAGGAAATGCGTATACTTA+TGG | - | chr7.2:6254611-6254630 | MS.gene07088:intron | 35.0% | |
| GCTAGAATTTACTAGGTAGT+CGG | - | chr7.2:6256636-6256655 | MS.gene07088:intron | 35.0% | |
| GCTGAAATAACTGATAAGCT+AGG | - | chr7.2:6257443-6257462 | MS.gene07088:intron | 35.0% | |
| TAAAAACTGCCAAACACTCT+TGG | + | chr7.2:6256864-6256883 | None:intergenic | 35.0% | |
| TCTACTTGTTCTATATGTGC+AGG | - | chr7.2:6257563-6257582 | MS.gene07088:intron | 35.0% | |
| TCTGTTAGAACTGTAAAGGT+TGG | - | chr7.2:6256094-6256113 | MS.gene07088:intron | 35.0% | |
| TGATAATTATGAAGCACGGA+TGG | - | chr7.2:6254751-6254770 | MS.gene07088:intron | 35.0% | |
| TTATGGGTTTCATGCAATAG+AGG | - | chr7.2:6255319-6255338 | MS.gene07088:intron | 35.0% | |
| TTCCTATCATCAAGAGACTT+GGG | - | chr7.2:6256304-6256323 | MS.gene07088:intron | 35.0% | |
| TTGCTTATAATAGTGACTGG+GGG | + | chr7.2:6254924-6254943 | None:intergenic | 35.0% | |
| TTGTAGAACTGTCAAGTGTT+AGG | - | chr7.2:6255936-6255955 | MS.gene07088:intron | 35.0% | |
| TTGTTCCGTGATATGCTATT+TGG | - | chr7.2:6255533-6255552 | MS.gene07088:intron | 35.0% | |
| TTTAATGTGCATTGGGTGTA+AGG | + | chr7.2:6256932-6256951 | None:intergenic | 35.0% | |
| TTTCCTATCATCAAGAGACT+TGG | - | chr7.2:6256303-6256322 | MS.gene07088:intron | 35.0% | |
| TTTCCTTCTTCGCAAATAAC+CGG | + | chr7.2:6254599-6254618 | None:intergenic | 35.0% | |
| ! | ACGATTGGTTGAAATTGGTA+TGG | - | chr7.2:6255281-6255300 | MS.gene07088:intron | 35.0% |
| ! | AGCCTAAAACGAACGATTTT+GGG | + | chr7.2:6256380-6256399 | None:intergenic | 35.0% |
| ! | ATCCCAAAATCGTTCGTTTT+AGG | - | chr7.2:6256375-6256394 | MS.gene07088:intron | 35.0% |
| ! | TTCCCTTTTCAGATTGTATC+TGG | + | chr7.2:6255008-6255027 | None:intergenic | 35.0% |
| !! | AGAACATTAGCTTTACTGTG+TGG | - | chr7.2:6255144-6255163 | MS.gene07088:CDS | 35.0% |
| !! | GAACATTAGCTTTACTGTGT+GGG | - | chr7.2:6255145-6255164 | MS.gene07088:CDS | 35.0% |
| !! | GAATTTGAACCAAGAGTGTT+TGG | - | chr7.2:6256852-6256871 | MS.gene07088:intron | 35.0% |
| !! | GTTTTAAATAGCAGCTAGAG+TGG | - | chr7.2:6255467-6255486 | MS.gene07088:intron | 35.0% |
| !! | TTGGTTGTTGTTGTTGTTTG+AGG | - | chr7.2:6256190-6256209 | MS.gene07088:intron | 35.0% |
| !!! | CCAGAGAGAGTATTTTATCA+AGG | - | chr7.2:6255047-6255066 | MS.gene07088:intron | 35.0% |
| !!! | TACACAAGGGCTTATTTTTG+TGG | - | chr7.2:6257181-6257200 | MS.gene07088:CDS | 35.0% |
| AAACAAGTCAAGAGGCCTAT+TGG | + | chr7.2:6255824-6255843 | None:intergenic | 40.0% | |
| AAATAACCGGCTGAATAGCT+TGG | + | chr7.2:6254586-6254605 | None:intergenic | 40.0% | |
| AAGCAGGGAAGAGGAAATTA+AGG | + | chr7.2:6257530-6257549 | None:intergenic | 40.0% | |
| AAGTAAGGTGATTTACGCCA+AGG | + | chr7.2:6257051-6257070 | None:intergenic | 40.0% | |
| ACTCACTCCCAATAACCAAT+AGG | - | chr7.2:6255806-6255825 | MS.gene07088:intron | 40.0% | |
| AGGGTTTAATGTGGAAACTG+TGG | - | chr7.2:6255115-6255134 | MS.gene07088:CDS | 40.0% | |
| ATTATCCAACTAAGTGGGGT+CGG | + | chr7.2:6256503-6256522 | None:intergenic | 40.0% | |
| ATTGGTTATTGGGAGTGAGT+TGG | + | chr7.2:6255806-6255825 | None:intergenic | 40.0% | |
| CAATGTCTGAGAGTAATGCA+AGG | + | chr7.2:6255868-6255887 | None:intergenic | 40.0% | |
| CATACTGTATCACAATGGAG+AGG | + | chr7.2:6256666-6256685 | None:intergenic | 40.0% | |
| CTCAAACAACATTGCAAGCA+AGG | - | chr7.2:6257645-6257664 | MS.gene07088:CDS | 40.0% | |
| GACTTTATGAAGGACTAGAC+TGG | - | chr7.2:6257620-6257639 | MS.gene07088:intron | 40.0% | |
| GTTGTAGCACTGTTGTATAG+CGG | - | chr7.2:6255592-6255611 | MS.gene07088:intron | 40.0% | |
| TAGCTTCAACAACACGATCT+CGG | + | chr7.2:6257220-6257239 | None:intergenic | 40.0% | |
| TCAGCAGCATTCATAGCATT+TGG | + | chr7.2:6257428-6257447 | None:intergenic | 40.0% | |
| TCTGGTGAAGGACTTTATGA+AGG | - | chr7.2:6257610-6257629 | MS.gene07088:intron | 40.0% | |
| TGGCTCATACTGTATCACAA+TGG | + | chr7.2:6256671-6256690 | None:intergenic | 40.0% | |
| TGTGGGGGAAAATTGGAAAA+TGG | - | chr7.2:6255992-6256011 | MS.gene07088:intron | 40.0% | |
| TTCATAAAGTCCTTCACCAG+AGG | + | chr7.2:6257611-6257630 | None:intergenic | 40.0% | |
| ! | AAACTTACCAATGGTGGGAA+TGG | + | chr7.2:6254703-6254722 | None:intergenic | 40.0% |
| ! | AACCCAAGTCTCTTGATGAT+AGG | + | chr7.2:6256309-6256328 | None:intergenic | 40.0% |
| ! | AATTTTCTGCGATGCGTGAT+TGG | - | chr7.2:6255736-6255755 | MS.gene07088:intron | 40.0% |
| ! | AGATCGTGTTGTTGAAGCTA+GGG | - | chr7.2:6257220-6257239 | MS.gene07088:intron | 40.0% |
| ! | CAAGAGGCCTATTGGTTATT+GGG | + | chr7.2:6255816-6255835 | None:intergenic | 40.0% |
| ! | CAGCCTAAAACGAACGATTT+TGG | + | chr7.2:6256381-6256400 | None:intergenic | 40.0% |
| ! | TCAAGAGGCCTATTGGTTAT+TGG | + | chr7.2:6255817-6255836 | None:intergenic | 40.0% |
| !! | CTTGTTTCTTGGGCCTATTT+TGG | - | chr7.2:6255837-6255856 | MS.gene07088:intron | 40.0% |
| !! | TTTGGTACATCGCTGTTTCT+TGG | - | chr7.2:6255212-6255231 | MS.gene07088:intron | 40.0% |
| AGAGTGATGTGGGGGAAAAT+TGG | - | chr7.2:6255985-6256004 | MS.gene07088:intron | 45.0% | |
| AGATGAGAATGGACAGAAGC+AGG | + | chr7.2:6257546-6257565 | None:intergenic | 45.0% | |
| AGCTTTACTGTGTGGGATGT+TGG | - | chr7.2:6255152-6255171 | MS.gene07088:CDS | 45.0% | |
| AGTCTATTGCTAACGTGGAC+TGG | - | chr7.2:6257019-6257038 | MS.gene07088:intron | 45.0% | |
| CATTCACCAAGCTATTCAGC+CGG | - | chr7.2:6254577-6254596 | MS.gene07088:intron | 45.0% | |
| GATGAGAATGGACAGAAGCA+GGG | + | chr7.2:6257545-6257564 | None:intergenic | 45.0% | |
| GGGGGAAAATTGGAAAATGG+AGG | - | chr7.2:6255995-6256014 | MS.gene07088:intron | 45.0% | |
| GTCTCAGTCTATTGCTAACG+TGG | - | chr7.2:6257014-6257033 | MS.gene07088:intron | 45.0% | |
| TGTTTCTTGGCGGCGTAATA+TGG | - | chr7.2:6255225-6255244 | MS.gene07088:intron | 45.0% | |
| TTATATGTGTCCGACCGTGT+CGG | - | chr7.2:6254828-6254847 | MS.gene07088:intron | 45.0% | |
| TTTACTGTGTGGGATGTTGG+TGG | - | chr7.2:6255155-6255174 | MS.gene07088:CDS | 45.0% | |
| TTTCCCCCACATCACTCTTT+GGG | + | chr7.2:6255983-6256002 | None:intergenic | 45.0% | |
| ! | AAGAATGGTGGTCTTACCAG+CGG | + | chr7.2:6254649-6254668 | None:intergenic | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr7.2:6256172-6256191 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr7.2:6256173-6256192 | None:intergenic | 45.0% |
| ! | GAGATCGTGTTGTTGAAGCT+AGG | - | chr7.2:6257219-6257238 | MS.gene07088:intron | 45.0% |
| ! | TTTTCCCCCACATCACTCTT+TGG | + | chr7.2:6255984-6256003 | None:intergenic | 45.0% |
| !! | AGGCCTCTTGACTTGTTTCT+TGG | - | chr7.2:6255826-6255845 | MS.gene07088:intron | 45.0% |
| !! | CGTTCGTTTTAGGCTGTTAC+TGG | - | chr7.2:6256385-6256404 | MS.gene07088:intron | 45.0% |
| !! | GGCCTCTTGACTTGTTTCTT+GGG | - | chr7.2:6255827-6255846 | MS.gene07088:intron | 45.0% |
| !! | TTTGAGGTGCACTAGCTCTA+GGG | - | chr7.2:6256206-6256225 | MS.gene07088:intron | 45.0% |
| AATGGACAGAAGCAGGGAAG+AGG | + | chr7.2:6257539-6257558 | None:intergenic | 50.0% | |
| ACATGTCCGACACCTAGACA+CGG | - | chr7.2:6254858-6254877 | MS.gene07088:CDS | 50.0% | |
| ACATGTGCTACCTCTGGTGA+AGG | - | chr7.2:6257598-6257617 | MS.gene07088:intron | 50.0% | |
| ACCTAGACACGGCTAATCCT+AGG | - | chr7.2:6254869-6254888 | MS.gene07088:CDS | 50.0% | |
| ACTAAGTGGGGTCGGATACA+TGG | + | chr7.2:6256495-6256514 | None:intergenic | 50.0% | |
| ATGGAGGAAATTGGGTGACG+TGG | - | chr7.2:6256011-6256030 | MS.gene07088:intron | 50.0% | |
| ATGGGCCCAAAGAGTGATGT+GGG | - | chr7.2:6255975-6255994 | MS.gene07088:intron | 50.0% | |
| ATTCACTTCGTCAGCGTCAC+TGG | - | chr7.2:6257471-6257490 | MS.gene07088:intron | 50.0% | |
| CAGCCGGTTATTTGCGAAGA+AGG | - | chr7.2:6254593-6254612 | MS.gene07088:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr7.2:6256171-6256190 | MS.gene07088:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr7.2:6256168-6256187 | None:intergenic | 50.0% | |
| GCTGCACAGGATGTTAAACG+AGG | - | chr7.2:6257247-6257266 | MS.gene07088:intron | 50.0% | |
| GGCCCAAGAAACAAGTCAAG+AGG | + | chr7.2:6255832-6255851 | None:intergenic | 50.0% | |
| TATGGGCCCAAAGAGTGATG+TGG | - | chr7.2:6255974-6255993 | MS.gene07088:intron | 50.0% | |
| TGTATCCGACCCCACTTAGT+TGG | - | chr7.2:6256495-6256514 | MS.gene07088:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr7.2:6256174-6256193 | None:intergenic | 50.0% |
| ! | CTTACCAATGGTGGGAATGG+TGG | + | chr7.2:6254700-6254719 | None:intergenic | 50.0% |
| ! | GATTAGCCGTGTCTAGGTGT+CGG | + | chr7.2:6254867-6254886 | None:intergenic | 50.0% |
| ! | GTTTGAGGTGCACTAGCTCT+AGG | - | chr7.2:6256205-6256224 | MS.gene07088:intron | 50.0% |
| !! | AATCCTAGGAGTGTCGACGT+TGG | - | chr7.2:6254883-6254902 | MS.gene07088:CDS | 50.0% |
| !! | ACGTGGACTGGCTTAAACCT+TGG | - | chr7.2:6257031-6257050 | MS.gene07088:intron | 50.0% |
| !! | GCACTAGCTCTAGGGTTACA+AGG | - | chr7.2:6256214-6256233 | MS.gene07088:intron | 50.0% |
| !! | GGTACATCGCTGTTTCTTGG+CGG | - | chr7.2:6255215-6255234 | MS.gene07088:intron | 50.0% |
| !! | TCCTAGGATTAGCCGTGTCT+AGG | + | chr7.2:6254873-6254892 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr7.2:6256160-6256179 | None:intergenic | 55.0% | |
| AGACCAACGTCGACACTCCT+AGG | + | chr7.2:6254889-6254908 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr7.2:6256159-6256178 | MS.gene07088:intron | 55.0% | |
| CAGAGCACATGTGCTACCTC+TGG | - | chr7.2:6257592-6257611 | MS.gene07088:intron | 55.0% | |
| CAGAGGTAGCACATGTGCTC+TGG | + | chr7.2:6257594-6257613 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr7.2:6256166-6256185 | MS.gene07088:intron | 55.0% | |
| GACATGTGTCGTGTCCGACA+CGG | + | chr7.2:6254845-6254864 | None:intergenic | 55.0% | |
| GTCACCACCATTCCCACCAT+TGG | - | chr7.2:6254693-6254712 | MS.gene07088:CDS | 55.0% | |
| TGGGCCCAAAGAGTGATGTG+GGG | - | chr7.2:6255976-6255995 | MS.gene07088:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr7.2:6256160-6256179 | MS.gene07088:intron | 55.0% | |
| AAGCTAGGGACGAGCTGCAC+AGG | - | chr7.2:6257234-6257253 | MS.gene07088:intron | 60.0% | |
| GGGCCCAAAGAGTGATGTGG+GGG | - | chr7.2:6255977-6255996 | MS.gene07088:intron | 60.0% | |
| TGTGTCGTGTCCGACACGGT+CGG | + | chr7.2:6254841-6254860 | None:intergenic | 60.0% | |
| !! | GGATGTTGGTGGCCAGGACA+AGG | - | chr7.2:6255166-6255185 | MS.gene07088:CDS | 60.0% |
| !! | TGTGTGGGATGTTGGTGGCC+AGG | - | chr7.2:6255160-6255179 | MS.gene07088:CDS | 60.0% |
| ATGGTCGGTCTCGATGCCGC+TGG | - | chr7.2:6254630-6254649 | MS.gene07088:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 6254567 | 6257771 | 6254567 | ID=MS.gene07088 |
| chr7.2 | mRNA | 6254567 | 6257771 | 6254567 | ID=MS.gene07088.t1;Parent=MS.gene07088 |
| chr7.2 | exon | 6257624 | 6257771 | 6257624 | ID=MS.gene07088.t1.exon1;Parent=MS.gene07088.t1 |
| chr7.2 | CDS | 6257624 | 6257771 | 6257624 | ID=cds.MS.gene07088.t1;Parent=MS.gene07088.t1 |
| chr7.2 | exon | 6257151 | 6257221 | 6257151 | ID=MS.gene07088.t1.exon2;Parent=MS.gene07088.t1 |
| chr7.2 | CDS | 6257151 | 6257221 | 6257151 | ID=cds.MS.gene07088.t1;Parent=MS.gene07088.t1 |
| chr7.2 | exon | 6255070 | 6255189 | 6255070 | ID=MS.gene07088.t1.exon3;Parent=MS.gene07088.t1 |
| chr7.2 | CDS | 6255070 | 6255189 | 6255070 | ID=cds.MS.gene07088.t1;Parent=MS.gene07088.t1 |
| chr7.2 | exon | 6254846 | 6254964 | 6254846 | ID=MS.gene07088.t1.exon4;Parent=MS.gene07088.t1 |
| chr7.2 | CDS | 6254846 | 6254964 | 6254846 | ID=cds.MS.gene07088.t1;Parent=MS.gene07088.t1 |
| chr7.2 | exon | 6254672 | 6254753 | 6254672 | ID=MS.gene07088.t1.exon5;Parent=MS.gene07088.t1 |
| chr7.2 | CDS | 6254672 | 6254753 | 6254672 | ID=cds.MS.gene07088.t1;Parent=MS.gene07088.t1 |
| chr7.2 | exon | 6254567 | 6254572 | 6254567 | ID=MS.gene07088.t1.exon6;Parent=MS.gene07088.t1 |
| chr7.2 | CDS | 6254567 | 6254572 | 6254567 | ID=cds.MS.gene07088.t1;Parent=MS.gene07088.t1 |
| Gene Sequence |
| Protein sequence |
