Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050556.t1 | XP_013450567.1 | 98.6 | 723 | 9 | 1 | 1 | 723 | 1 | 722 | 0.00E+00 | 1263.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050556.t1 | Q8CHW4 | 35.4 | 714 | 406 | 22 | 26 | 722 | 42 | 717 | 9.9e-87 | 322.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050556.t1 | A0A072UFN2 | 98.6 | 723 | 9 | 1 | 1 | 723 | 1 | 722 | 0.0e+00 | 1263.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene050556 | 0.81285 | 3.45E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene052242 | -0.80669 | 7.28E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene052609 | 0.821685 | 3.54E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene052776 | 0.810008 | 1.43E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene053079 | 0.807172 | 5.75E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene054479 | 0.807974 | 3.89E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene054576 | 0.80467 | 1.93E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene055313 | 0.80533 | 1.41E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene055469 | 0.803032 | 4.23E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene055513 | 0.827584 | 1.44E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene056045 | 0.814429 | 1.55E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene057919 | 0.829234 | 5.77E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene058289 | 0.827237 | 1.75E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene058638 | 0.840672 | 7.55E-58 | -1.69E-46 |
| MS.gene050556 | MS.gene058639 | 0.843888 | 1.06E-58 | -1.69E-46 |
| MS.gene050556 | MS.gene058758 | 0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene059018 | 0.813273 | 2.78E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene060380 | 0.804966 | 1.68E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene060400 | 0.818383 | 2.02E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene061100 | 0.804565 | 2.03E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene06133 | 0.809347 | 1.98E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene061707 | 0.811021 | 8.62E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene063132 | 0.831624 | 1.50E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene06324 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene064336 | 0.835818 | 1.34E-56 | -1.69E-46 |
| MS.gene050556 | MS.gene065593 | 0.850982 | 1.19E-60 | -1.69E-46 |
| MS.gene050556 | MS.gene065823 | 0.823835 | 1.12E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene065934 | 0.814105 | 1.82E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene069690 | 0.822302 | 2.55E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene071699 | 0.808767 | 2.63E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene072762 | 0.802699 | 4.96E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene073387 | 0.81124 | 7.73E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene073390 | 0.83053 | 2.79E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene09852 | 0.811769 | 5.93E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene21699 | 0.804882 | 1.75E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene21826 | 0.823595 | 1.27E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene22877 | 0.877896 | 4.35E-69 | -1.69E-46 |
| MS.gene050556 | MS.gene23525 | 0.81318 | 2.92E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene23528 | 0.809812 | 1.57E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene23963 | 0.819938 | 8.93E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene24903 | 0.810992 | 8.75E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene25293 | 0.802383 | 5.76E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene26396 | 0.813634 | 2.32E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene27401 | 0.853883 | 1.78E-61 | -1.69E-46 |
| MS.gene050556 | MS.gene28454 | 0.803292 | 3.74E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene28536 | 0.816199 | 6.26E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene28611 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene28979 | 0.81473 | 1.33E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene29233 | 0.834677 | 2.61E-56 | -1.69E-46 |
| MS.gene050556 | MS.gene29361 | 0.811903 | 5.55E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene30753 | 0.836628 | 8.37E-57 | -1.69E-46 |
| MS.gene050556 | MS.gene31650 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene32555 | 0.804726 | 1.88E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene32685 | 0.82234 | 2.50E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene32863 | 0.804995 | 1.65E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene33135 | 0.824641 | 7.23E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene33177 | 0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene33466 | 0.822996 | 1.76E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene34453 | 0.821088 | 4.86E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene34485 | 0.843275 | 1.55E-58 | -1.69E-46 |
| MS.gene050556 | MS.gene34691 | 0.804981 | 1.66E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene35645 | 0.811398 | 7.14E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene36154 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene36289 | 0.822503 | 2.29E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene37917 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene38378 | 0.813985 | 1.94E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene39046 | 0.81016 | 1.32E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene39314 | 0.80932 | 2.01E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene39529 | 0.812515 | 4.08E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene39556 | 0.817094 | 3.94E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene40093 | 0.814913 | 1.21E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene40330 | 0.808865 | 2.51E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene40969 | 0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene41088 | 0.821005 | 5.08E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene41427 | 0.82072 | 5.91E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene41678 | 0.807654 | 4.55E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene41681 | 0.811637 | 6.34E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene43202 | 0.818637 | 1.77E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene44164 | 0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene44698 | 0.803695 | 3.08E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene44967 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene45172 | 0.838208 | 3.30E-57 | -1.69E-46 |
| MS.gene050556 | MS.gene45281 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene45624 | 0.819006 | 1.46E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene46069 | -0.818987 | 1.47E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene47374 | -0.818066 | 2.38E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene47554 | 0.820214 | 7.72E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene47581 | 0.816774 | 4.65E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene47695 | 0.819786 | 9.67E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene47747 | 0.83714 | 6.20E-57 | -1.69E-46 |
| MS.gene050556 | MS.gene47806 | 0.808136 | 3.59E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene47822 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene48283 | 0.8097 | 1.66E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene48526 | 0.806903 | 6.56E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene49467 | 0.831598 | 1.52E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene51029 | 0.81117 | 8.01E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene51704 | 0.808808 | 2.58E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene51985 | 0.838644 | 2.54E-57 | -1.69E-46 |
| MS.gene050556 | MS.gene52956 | 0.808284 | 3.34E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene53373 | 0.806668 | 7.36E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene53600 | 0.821277 | 4.40E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene54045 | 0.870057 | 1.95E-66 | -1.69E-46 |
| MS.gene050556 | MS.gene56039 | 0.804544 | 2.05E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene56339 | 0.823692 | 1.21E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene56476 | 0.828696 | 7.79E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene56510 | 0.800145 | 1.65E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene56565 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene57576 | 0.823079 | 1.68E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene57709 | 0.834669 | 2.62E-56 | -1.69E-46 |
| MS.gene050556 | MS.gene58134 | 0.853106 | 2.98E-61 | -1.69E-46 |
| MS.gene050556 | MS.gene58284 | 0.812828 | 3.48E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene58506 | 0.801342 | 9.42E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene58571 | 0.828951 | 6.76E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene58617 | 0.825538 | 4.44E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene58763 | 0.828129 | 1.07E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene59366 | 0.857994 | 1.12E-62 | -1.69E-46 |
| MS.gene050556 | MS.gene59499 | 0.819924 | 8.99E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene60144 | 0.83399 | 3.88E-56 | -1.69E-46 |
| MS.gene050556 | MS.gene60163 | 0.826998 | 1.99E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene62501 | 0.807626 | 4.61E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene63530 | 0.809362 | 1.96E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene63961 | 0.82906 | 6.36E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene64519 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene64709 | 0.806322 | 8.70E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene64800 | 0.826934 | 2.07E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene66975 | 0.822763 | 1.99E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene67141 | 0.800387 | 1.48E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene67298 | 0.80272 | 4.91E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene67299 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene68106 | 0.814956 | 1.18E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene68783 | 0.803721 | 3.05E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene69148 | 0.801313 | 9.55E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene71810 | 0.804935 | 1.70E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene74235 | 0.808721 | 2.69E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene74932 | 0.800096 | 1.69E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene75219 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene75229 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene76506 | 0.816906 | 4.34E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene77208 | 0.802118 | 6.53E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene77497 | 0.803631 | 3.18E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene77576 | -0.809973 | 1.45E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene78230 | 0.819168 | 1.34E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene79120 | 0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene79543 | 0.818351 | 2.05E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene80202 | 0.816146 | 6.43E-52 | -1.69E-46 |
| MS.gene050556 | MS.gene82989 | 0.827304 | 1.68E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene84183 | 0.812036 | 5.19E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene84498 | 0.814682 | 1.36E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene84840 | 0.805494 | 1.30E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene85122 | 0.81168 | 6.20E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene86140 | 0.800185 | 1.62E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene87358 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene87622 | 0.823544 | 1.31E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene88649 | 0.831474 | 1.64E-55 | -1.69E-46 |
| MS.gene050556 | MS.gene89581 | 0.810144 | 1.33E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene89730 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene89812 | 0.807829 | 4.18E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene90260 | 0.806046 | 9.95E-50 | -1.69E-46 |
| MS.gene050556 | MS.gene90431 | 0.801704 | 7.94E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene93140 | 0.800457 | 1.43E-48 | -1.69E-46 |
| MS.gene050556 | MS.gene94615 | 0.814755 | 1.31E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene95562 | 0.823637 | 1.24E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene97105 | 0.805884 | 1.08E-49 | -1.69E-46 |
| MS.gene050556 | MS.gene99525 | 0.809738 | 1.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene068593 | MS.gene050556 | PPI |
| MS.gene017244 | MS.gene050556 | PPI |
| MS.gene68633 | MS.gene050556 | PPI |
| MS.gene025997 | MS.gene050556 | PPI |
| MS.gene05134 | MS.gene050556 | PPI |
| MS.gene064140 | MS.gene050556 | PPI |
| MS.gene030166 | MS.gene050556 | PPI |
| MS.gene069130 | MS.gene050556 | PPI |
| MS.gene22877 | MS.gene050556 | PPI |
| MS.gene41455 | MS.gene050556 | PPI |
| MS.gene26250 | MS.gene050556 | PPI |
| MS.gene009656 | MS.gene050556 | PPI |
| MS.gene024538 | MS.gene050556 | PPI |
| MS.gene98041 | MS.gene050556 | PPI |
| MS.gene070896 | MS.gene050556 | PPI |
| MS.gene017243 | MS.gene050556 | PPI |
| MS.gene009658 | MS.gene050556 | PPI |
| MS.gene027802 | MS.gene050556 | PPI |
| MS.gene008447 | MS.gene050556 | PPI |
| MS.gene26249 | MS.gene050556 | PPI |
| MS.gene26777 | MS.gene050556 | PPI |
| MS.gene98042 | MS.gene050556 | PPI |
| MS.gene049580 | MS.gene050556 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050556.t1 | MTR_7g115610 | 98.479 | 723 | 10 | 1 | 1 | 723 | 1 | 722 | 0.0 | 1475 |
| MS.gene050556.t1 | MTR_6g023790 | 76.087 | 138 | 25 | 3 | 581 | 715 | 130 | 262 | 4.90e-60 | 203 |
| MS.gene050556.t1 | MTR_6g023790 | 61.194 | 67 | 16 | 1 | 1 | 67 | 90 | 146 | 1.52e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050556.t1 | AT2G34970 | 62.845 | 724 | 248 | 7 | 1 | 714 | 1 | 713 | 0.0 | 914 |
| MS.gene050556.t1 | AT4G18300 | 58.425 | 724 | 268 | 13 | 1 | 714 | 1 | 701 | 0.0 | 818 |
| MS.gene050556.t1 | AT3G02270 | 55.418 | 729 | 261 | 14 | 1 | 719 | 1 | 675 | 0.0 | 752 |
Find 144 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGGCCTCCTTCACATTT+TGG | 0.127019 | 7.4:-2194085 | None:intergenic |
| GTACCAGATGTTATGAATTT+TGG | 0.128972 | 7.4:+2190481 | MS.gene050556:CDS |
| GGCAGTATTCTTCCACCTTC+TGG | 0.135809 | 7.4:+2194202 | MS.gene050556:CDS |
| AAGATACTCACTTGAATTAA+TGG | 0.203717 | 7.4:-2197059 | None:intergenic |
| TATTACTGAAGATAAAATTT+TGG | 0.227298 | 7.4:+2194135 | MS.gene050556:CDS |
| AGAAACTGCTTCTGAATTAT+TGG | 0.228648 | 7.4:+2193097 | MS.gene050556:CDS |
| GCTTGTTCGTGTTCCGTTAC+AGG | 0.244182 | 7.4:+2186108 | MS.gene050556:CDS |
| GAAGCAGGTGATTAACTATT+TGG | 0.248892 | 7.4:+2187494 | MS.gene050556:CDS |
| GTTGGCCCATTCTCTGTTAT+AGG | 0.251239 | 7.4:+2190893 | MS.gene050556:CDS |
| ATAGTTGTTACAGTAAAATT+AGG | 0.269459 | 7.4:-2187540 | None:intergenic |
| AGTCAAAATTGTCTGTAAAT+AGG | 0.286591 | 7.4:-2189856 | None:intergenic |
| TTATATTTCTTTCAGATAAT+GGG | 0.293378 | 7.4:+2190346 | MS.gene050556:intron |
| TTCGTCTTCATCGTCTTCTT+CGG | 0.298425 | 7.4:-2197210 | None:intergenic |
| TGTACTTACCAAGTGGAAAA+AGG | 0.300815 | 7.4:+2196048 | MS.gene050556:CDS |
| TACAAAAGTTGCTTGGTATT+AGG | 0.305309 | 7.4:-2189260 | None:intergenic |
| AGTAGAGATACTTGTGAATA+AGG | 0.319455 | 7.4:-2191588 | None:intergenic |
| AAAGCTCACCAGCTGAACTA+TGG | 0.322453 | 7.4:-2195283 | None:intergenic |
| AAAATTTGAAGAAATGTGTT+TGG | 0.336103 | 7.4:+2196368 | MS.gene050556:CDS |
| GCAGTATTCTTCCACCTTCT+GGG | 0.337376 | 7.4:+2194203 | MS.gene050556:CDS |
| TTGGTGGGGCTGGTTATGTT+TGG | 0.339452 | 7.4:+2194062 | MS.gene050556:CDS |
| TCGTCTTCATCGTCTTCTTC+GGG | 0.349579 | 7.4:-2197209 | None:intergenic |
| TCATGTTTCCAGGTTGTAGT+TGG | 0.360879 | 7.4:+2191546 | MS.gene050556:intron |
| TCATCGTCATCTGAATCATT+AGG | 0.362858 | 7.4:-2194241 | None:intergenic |
| ACATAGAGGGATGCTATATA+TGG | 0.363209 | 7.4:+2190996 | MS.gene050556:CDS |
| CCATTCTCTGTTATAGGATC+TGG | 0.364215 | 7.4:+2190899 | MS.gene050556:CDS |
| AAGTTCACAGCCATCTTCTA+TGG | 0.377775 | 7.4:-2191029 | None:intergenic |
| GTCAATGTGTAATTTATCAT+TGG | 0.388585 | 7.4:-2187417 | None:intergenic |
| GTCGGAGTAGGATGCAAAAT+CGG | 0.392986 | 7.4:+2190962 | MS.gene050556:CDS |
| GTAAATAGGCTAAGGACTTC+CGG | 0.402526 | 7.4:-2189842 | None:intergenic |
| GAAAGCTATGGAAGATGAAC+TGG | 0.408041 | 7.4:+2194165 | MS.gene050556:CDS |
| CCGGAACAAACCTCTGAAGC+AGG | 0.410804 | 7.4:-2193134 | None:intergenic |
| TCATCTGAATCATTAGGATT+AGG | 0.423207 | 7.4:-2194235 | None:intergenic |
| CTGCTGTGCTCATGCGAAGC+AGG | 0.446859 | 7.4:+2187479 | MS.gene050556:CDS |
| CATGTTTCCAGGTTGTAGTT+GGG | 0.449794 | 7.4:+2191547 | MS.gene050556:intron |
| TTGCCAAAATTCATAACATC+TGG | 0.452105 | 7.4:-2190484 | None:intergenic |
| CAAGCACAATCAGCTGTTGT+TGG | 0.455052 | 7.4:+2190875 | MS.gene050556:CDS |
| CCAGATCCTATAACAGAGAA+TGG | 0.455733 | 7.4:-2190899 | None:intergenic |
| TCGTCGCTATCTTCCTCAAC+CGG | 0.456281 | 7.4:-2191618 | None:intergenic |
| CTCTCTGCACCATGACAAGC+AGG | 0.458401 | 7.4:+2189358 | MS.gene050556:CDS |
| TCGGAGTAGGATGCAAAATC+GGG | 0.464129 | 7.4:+2190963 | MS.gene050556:CDS |
| CTTGAATTAATGGTTGAGCT+TGG | 0.472089 | 7.4:-2197049 | None:intergenic |
| AATTGACTTCTAAAGTCAAA+TGG | 0.473008 | 7.4:-2194421 | None:intergenic |
| TAATGACCATGGTTATTAAA+CGG | 0.473067 | 7.4:+2189171 | MS.gene050556:CDS |
| TTTCCAGGTTGTAGTTGGGC+AGG | 0.474402 | 7.4:+2191551 | MS.gene050556:intron |
| GCAAGGATATAATTCATAGA+TGG | 0.481776 | 7.4:+2190446 | MS.gene050556:CDS |
| AAGCTCACCAGCTGAACTAT+GGG | 0.483922 | 7.4:-2195282 | None:intergenic |
| TCTACTACAGCAGCCGGTTG+AGG | 0.489304 | 7.4:+2191605 | MS.gene050556:CDS |
| TATGAAATCAGGATCTGCTC+TGG | 0.490344 | 7.4:+2191081 | MS.gene050556:CDS |
| TTTGGAGGCAATGAAAGCTA+TGG | 0.494317 | 7.4:+2194153 | MS.gene050556:CDS |
| GACTTGCCCCATAGTTCAGC+TGG | 0.494761 | 7.4:+2195275 | MS.gene050556:CDS |
| TTAAATTCCGTCGTCGGAGT+AGG | 0.496201 | 7.4:+2190950 | MS.gene050556:CDS |
| TGAGAAGAAAGGCGCGGATG+AGG | 0.496216 | 7.4:+2197007 | MS.gene050556:CDS |
| GATAAAGCAGACTTCTCAAA+AGG | 0.505881 | 7.4:+2189290 | MS.gene050556:CDS |
| AAGATAGCTGCTGATTGTGC+TGG | 0.506462 | 7.4:+2195218 | MS.gene050556:CDS |
| CAAGGAATATACCGTGGCTC+AGG | 0.508177 | 7.4:+2190529 | MS.gene050556:CDS |
| TTGGGGCGTTCAAGAGTGAT+AGG | 0.508515 | 7.4:-2186169 | None:intergenic |
| CTTATCCACTGTGCTGGTGA+TGG | 0.511806 | 7.4:-2193066 | None:intergenic |
| TTACGGTATCTCCACTGATA+AGG | 0.515780 | 7.4:-2189082 | None:intergenic |
| TCAGGATCTGCTCTGGAACC+TGG | 0.517246 | 7.4:+2191088 | MS.gene050556:CDS |
| CTCGTAATACAAAAGTTGCT+TGG | 0.522774 | 7.4:-2189267 | None:intergenic |
| TCCGTTACAGGCGATTCTGT+TGG | 0.523711 | 7.4:+2186120 | MS.gene050556:CDS |
| AAGAGATGACTTTGACAAAG+AGG | 0.524902 | 7.4:+2194276 | MS.gene050556:CDS |
| TTTGCATCCTACTCCGACGA+CGG | 0.525897 | 7.4:-2190957 | None:intergenic |
| TAGAAGATGGCTGTGAACTT+AGG | 0.527350 | 7.4:+2191032 | MS.gene050556:CDS |
| AGTTGGGAAGATGAGAAGAA+AGG | 0.528430 | 7.4:+2196996 | MS.gene050556:CDS |
| ATCTGACTTATCCACTGTGC+TGG | 0.528457 | 7.4:-2193072 | None:intergenic |
| CAGTATTCTTCCACCTTCTG+GGG | 0.529996 | 7.4:+2194204 | MS.gene050556:CDS |
| CGGTACCAAGTCGAGACTGA+TGG | 0.534696 | 7.4:-2189214 | None:intergenic |
| AGTCGAGACTGATGGATAGC+TGG | 0.535756 | 7.4:-2189206 | None:intergenic |
| AATGCCTCCACTCTTCCTCA+TGG | 0.540422 | 7.4:-2194102 | None:intergenic |
| CATAGAGGGATGCTATATAT+GGG | 0.540737 | 7.4:+2190997 | MS.gene050556:CDS |
| CACCGAAGAAAAGCGCTGCT+AGG | 0.545842 | 7.4:+2186065 | MS.gene050556:CDS |
| TCTGAATGATACGGACGAGC+AGG | 0.546245 | 7.4:+2196084 | MS.gene050556:CDS |
| AAGGAGGCCATGAGGAAGAG+TGG | 0.549988 | 7.4:+2194095 | MS.gene050556:CDS |
| ACCGAAGAAAAGCGCTGCTA+GGG | 0.550483 | 7.4:+2186066 | MS.gene050556:CDS |
| AATTGTCTGTAAATAGGCTA+AGG | 0.551876 | 7.4:-2189850 | None:intergenic |
| TCTCAAAATTGTGTCAGTGC+TGG | 0.552524 | 7.4:+2187567 | MS.gene050556:CDS |
| TGCATCCTATCTGAATGATA+CGG | 0.553061 | 7.4:+2196075 | MS.gene050556:CDS |
| AGTAAGCGACATGTTGCTTA+CGG | 0.553527 | 7.4:-2189099 | None:intergenic |
| AAGAATACCTTTGTGAACAA+TGG | 0.554034 | 7.4:-2196411 | None:intergenic |
| ATCATTGGAACATTCGCCAA+TGG | 0.555479 | 7.4:-2187402 | None:intergenic |
| AGGCATGCCATTGTATGTGA+GGG | 0.557311 | 7.4:+2191052 | MS.gene050556:CDS |
| CAGATCCTATAACAGAGAAT+GGG | 0.557862 | 7.4:-2190898 | None:intergenic |
| CAAAATGACGCCGAAGATGT+TGG | 0.560588 | 7.4:-2189880 | None:intergenic |
| GCTTGTCATGGTGCAGAGAG+AGG | 0.561389 | 7.4:-2189355 | None:intergenic |
| AATAGCCATGAAAATTTCAT+CGG | 0.561616 | 7.4:-2189234 | None:intergenic |
| GGAAGAGTGGAGGCATTCAA+TGG | 0.562439 | 7.4:+2194108 | MS.gene050556:CDS |
| GACAATGTCACCATAGAAGA+TGG | 0.562927 | 7.4:+2191019 | MS.gene050556:CDS |
| TTACATTGACATCTGCTCGC+CGG | 0.564196 | 7.4:+2189823 | MS.gene050556:CDS |
| ACTGCTTCTGAATTATTGGA+TGG | 0.564790 | 7.4:+2193101 | MS.gene050556:CDS |
| GGAGACTTTGTCCTTATCAG+TGG | 0.573784 | 7.4:+2189071 | MS.gene050556:CDS |
| GGGGCTCAACCTGCTTGTCA+TGG | 0.573811 | 7.4:-2189367 | None:intergenic |
| TGAATCAGCTGGTGTAGAAG+AGG | 0.574781 | 7.4:+2187446 | MS.gene050556:CDS |
| TTCATAACATCTGGTACCAG+TGG | 0.577449 | 7.4:-2190475 | None:intergenic |
| AAGAGTGATAGGTCTAAACT+TGG | 0.579985 | 7.4:-2186158 | None:intergenic |
| TGCTGACAGTGTCATAACTT+CGG | 0.582802 | 7.4:-2190426 | None:intergenic |
| AAGCAACATGTCGCTTACTC+AGG | 0.583205 | 7.4:+2189103 | MS.gene050556:CDS |
| AGTATCTCTACTACAGCAGC+CGG | 0.584040 | 7.4:+2191599 | MS.gene050556:CDS |
| TCATAGATGGACATATCCAC+TGG | 0.588064 | 7.4:+2190459 | MS.gene050556:CDS |
| CTTGTCATGGTGCAGAGAGA+GGG | 0.589004 | 7.4:-2189354 | None:intergenic |
| GCTATCCATCAGTCTCGACT+TGG | 0.593196 | 7.4:+2189209 | MS.gene050556:CDS |
| GAACTGGAGTTAATTCATGA+TGG | 0.593221 | 7.4:+2194181 | MS.gene050556:CDS |
| CGGGTCAAATGTACACATAG+AGG | 0.593427 | 7.4:+2190982 | MS.gene050556:CDS |
| GCCAACAGAATCGCCTGTAA+CGG | 0.595148 | 7.4:-2186121 | None:intergenic |
| TTGTCTGTAGTGGCTAAAAG+AGG | 0.596027 | 7.4:+2197184 | MS.gene050556:intron |
| CTCGTCCGTATCATTCAGAT+AGG | 0.596542 | 7.4:-2196080 | None:intergenic |
| AGCACAGTGGATAAGTCAGA+TGG | 0.596852 | 7.4:+2193074 | MS.gene050556:CDS |
| TTCATGTTGTACTTACCAAG+TGG | 0.599094 | 7.4:+2196041 | MS.gene050556:CDS |
| CGGAACAAACCTCTGAAGCA+GGG | 0.599221 | 7.4:-2193133 | None:intergenic |
| TAGGCATGCCATTGTATGTG+AGG | 0.601520 | 7.4:+2191051 | MS.gene050556:CDS |
| GAAGAAAGGCGCGGATGAGG+CGG | 0.603471 | 7.4:+2197010 | MS.gene050556:CDS |
| GGTAACAGCTCCCCAGAAGG+TGG | 0.603673 | 7.4:-2194214 | None:intergenic |
| AAGCGCTGCTAGGGTTTCAG+AGG | 0.606605 | 7.4:+2186075 | MS.gene050556:CDS |
| TTGACATGGCTTGAATCAGC+TGG | 0.610800 | 7.4:+2187435 | MS.gene050556:CDS |
| GTTTGCTCCATTGTTCACAA+AGG | 0.615724 | 7.4:+2196404 | MS.gene050556:CDS |
| TGATAAATTACACATTGACA+TGG | 0.618999 | 7.4:+2187421 | MS.gene050556:CDS |
| AAGTTATGACACTGTCAGCA+AGG | 0.620949 | 7.4:+2190429 | MS.gene050556:CDS |
| AATGTGTTTGGAATCTGCGA+AGG | 0.621847 | 7.4:+2196380 | MS.gene050556:CDS |
| GTTTGGCCAAAATGTGAAGG+AGG | 0.624679 | 7.4:+2194079 | MS.gene050556:CDS |
| TTAAAAGACAGCACAACACC+AGG | 0.626342 | 7.4:-2191106 | None:intergenic |
| GGGTCAAATGTACACATAGA+GGG | 0.626953 | 7.4:+2190983 | MS.gene050556:CDS |
| GGCATGCCATTGTATGTGAG+GGG | 0.631236 | 7.4:+2191053 | MS.gene050556:CDS |
| TTAGGTAACAGCTCCCCAGA+AGG | 0.638298 | 7.4:-2194217 | None:intergenic |
| TCCGCGCAGATTATGCTGCA+AGG | 0.638328 | 7.4:+2190392 | MS.gene050556:CDS |
| TATCACTCTTGAACGCCCCA+AGG | 0.638983 | 7.4:+2186171 | MS.gene050556:CDS |
| TCATGGTGCAGAGAGAGGGA+AGG | 0.640432 | 7.4:-2189350 | None:intergenic |
| GAATATGCTGATAGTACTAG+TGG | 0.642214 | 7.4:+2191648 | MS.gene050556:CDS |
| GAGGCCATGAGGAAGAGTGG+AGG | 0.645571 | 7.4:+2194098 | MS.gene050556:CDS |
| GCTACTAAGCTTGAAAGACA+AGG | 0.649677 | 7.4:+2190511 | MS.gene050556:CDS |
| TAGTAATGCTGTAATGACCA+TGG | 0.655646 | 7.4:+2189160 | MS.gene050556:CDS |
| AGCTCACCAGCTGAACTATG+GGG | 0.666465 | 7.4:-2195281 | None:intergenic |
| TATGTTTGGCCAAAATGTGA+AGG | 0.666968 | 7.4:+2194076 | MS.gene050556:CDS |
| TTTCATCCATACCTGAGCCA+CGG | 0.672449 | 7.4:-2190540 | None:intergenic |
| AGAGATACTTGTGAATAAGG+AGG | 0.676241 | 7.4:-2191585 | None:intergenic |
| GGAAGATGAGAAGAAAGGCG+CGG | 0.690784 | 7.4:+2197001 | MS.gene050556:CDS |
| TGCAGCCATCACCAGCACAG+TGG | 0.703317 | 7.4:+2193061 | MS.gene050556:intron |
| TATTATATACGAGCGCAACG+TGG | 0.703453 | 7.4:+2187602 | MS.gene050556:CDS |
| GCATGCCATTGTATGTGAGG+GGG | 0.713162 | 7.4:+2191054 | MS.gene050556:CDS |
| AAAATGTGAAGGAGGCCATG+AGG | 0.717990 | 7.4:+2194087 | MS.gene050556:CDS |
| ACTATTTGGAGAAATCTGAG+TGG | 0.722937 | 7.4:+2187508 | MS.gene050556:CDS |
| TCCTTGCAGCATAATCTGCG+CGG | 0.727596 | 7.4:-2190393 | None:intergenic |
| GAAAGACAAGGAATATACCG+TGG | 0.737588 | 7.4:+2190523 | MS.gene050556:CDS |
| GAACACGAACAAGCTCATCG+TGG | 0.778351 | 7.4:-2186099 | None:intergenic |
| ATTGCACTACATGTATAACG+AGG | 0.789338 | 7.4:+2196947 | MS.gene050556:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 2186058 | 2197238 | 2186058 | ID=MS.gene050556 |
| chr7.4 | mRNA | 2186058 | 2197238 | 2186058 | ID=MS.gene050556.t1;Parent=MS.gene050556 |
| chr7.4 | exon | 2186058 | 2186192 | 2186058 | ID=MS.gene050556.t1.exon1;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2186058 | 2186192 | 2186058 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2187393 | 2187623 | 2187393 | ID=MS.gene050556.t1.exon2;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2187393 | 2187623 | 2187393 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2189065 | 2189379 | 2189065 | ID=MS.gene050556.t1.exon3;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2189065 | 2189379 | 2189065 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2189818 | 2189925 | 2189818 | ID=MS.gene050556.t1.exon4;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2189818 | 2189925 | 2189818 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2190361 | 2190550 | 2190361 | ID=MS.gene050556.t1.exon5;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2190361 | 2190550 | 2190361 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2190867 | 2191129 | 2190867 | ID=MS.gene050556.t1.exon6;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2190867 | 2191129 | 2190867 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2191558 | 2191669 | 2191558 | ID=MS.gene050556.t1.exon7;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2191558 | 2191669 | 2191558 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2193066 | 2193145 | 2193066 | ID=MS.gene050556.t1.exon8;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2193066 | 2193145 | 2193066 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2194055 | 2194297 | 2194055 | ID=MS.gene050556.t1.exon9;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2194055 | 2194297 | 2194055 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2194374 | 2194450 | 2194374 | ID=MS.gene050556.t1.exon10;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2194374 | 2194450 | 2194374 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2195205 | 2195296 | 2195205 | ID=MS.gene050556.t1.exon11;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2195205 | 2195296 | 2195205 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2196023 | 2196105 | 2196023 | ID=MS.gene050556.t1.exon12;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2196023 | 2196105 | 2196023 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2196354 | 2196425 | 2196354 | ID=MS.gene050556.t1.exon13;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2196354 | 2196425 | 2196354 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2196945 | 2197070 | 2196945 | ID=MS.gene050556.t1.exon14;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2196945 | 2197070 | 2196945 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| chr7.4 | exon | 2197194 | 2197238 | 2197194 | ID=MS.gene050556.t1.exon15;Parent=MS.gene050556.t1 |
| chr7.4 | CDS | 2197194 | 2197238 | 2197194 | ID=cds.MS.gene050556.t1;Parent=MS.gene050556.t1 |
| Gene Sequence |
| Protein sequence |
