AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92186


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92186.t1 MTR_0167s0060 100.000 235 0 0 1 235 1 235 9.45e-175 479
MS.gene92186.t1 MTR_8g075320 38.767 227 134 3 4 228 2 225 1.11e-51 168
MS.gene92186.t1 MTR_2g060830 38.961 231 136 4 6 231 9 239 1.25e-51 168
MS.gene92186.t1 MTR_7g070070 36.752 234 141 4 5 231 4 237 6.13e-49 161
MS.gene92186.t1 MTR_5g016590 36.325 234 142 4 5 231 4 237 4.15e-48 159
MS.gene92186.t1 MTR_8g464460 38.961 231 136 4 6 231 9 239 5.18e-48 159
MS.gene92186.t1 MTR_1g112250 35.526 228 142 2 4 228 6 231 1.84e-47 157
MS.gene92186.t1 MTR_2g016050 37.445 227 137 3 4 228 2 225 2.35e-46 154
MS.gene92186.t1 MTR_1g022410 35.111 225 141 3 1 222 1 223 1.79e-41 143
MS.gene92186.t1 MTR_6g024135 36.612 183 116 0 6 188 8 190 4.38e-39 135
MS.gene92186.t1 MTR_4g012740 28.409 264 144 6 1 222 232 492 2.81e-26 106
MS.gene92186.t1 MTR_4g057090 29.032 217 142 7 9 218 91 302 8.63e-16 75.5
MS.gene92186.t1 MTR_6g013300 28.571 189 123 4 32 214 136 318 9.07e-14 69.7
MS.gene92186.t1 MTR_3g113730 32.692 104 67 2 122 222 6 109 4.74e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92186.t1 AT1G16470 94.043 235 14 0 1 235 1 235 5.50e-164 452
MS.gene92186.t1 AT1G16470 94.043 235 14 0 1 235 1 235 5.50e-164 452
MS.gene92186.t1 AT1G79210 93.191 235 16 0 1 235 1 235 1.03e-162 449
MS.gene92186.t1 AT1G79210 93.191 235 16 0 1 235 1 235 1.03e-162 449
MS.gene92186.t1 AT1G79210 93.191 235 16 0 1 235 1 235 1.03e-162 449
MS.gene92186.t1 AT5G66140 39.035 228 133 4 4 228 2 226 3.83e-50 164
MS.gene92186.t1 AT3G51260 38.596 228 134 4 4 228 2 226 8.88e-49 160
MS.gene92186.t1 AT3G51260 39.623 212 123 3 4 213 2 210 1.60e-48 160
MS.gene92186.t1 AT1G53850 35.526 228 142 2 4 228 6 231 1.62e-47 157
MS.gene92186.t1 AT1G53850 35.526 228 142 2 4 228 6 231 1.62e-47 157
MS.gene92186.t1 AT3G14290 35.526 228 142 2 4 228 6 231 3.49e-47 156
MS.gene92186.t1 AT5G35590 37.229 231 140 4 6 231 9 239 3.74e-47 156
MS.gene92186.t1 AT3G22110 36.245 229 136 4 5 230 4 225 2.25e-46 154
MS.gene92186.t1 AT2G05840 35.931 231 143 4 6 231 9 239 1.90e-44 149
MS.gene92186.t1 AT5G42790 36.444 225 138 3 1 222 1 223 3.01e-42 145
MS.gene92186.t1 AT1G47250 34.034 238 152 3 1 235 1 236 1.72e-40 140
MS.gene92186.t1 AT2G05840 34.928 209 132 3 6 210 9 217 1.95e-38 133
MS.gene92186.t1 AT2G27020 32.710 214 143 1 6 218 8 221 3.07e-36 128
MS.gene92186.t1 AT2G05840 35.955 178 112 2 6 181 9 186 4.45e-35 124
MS.gene92186.t1 AT2G27020 32.710 214 143 1 6 218 110 323 5.35e-35 127
MS.gene92186.t1 AT4G15165 26.754 228 117 4 5 230 4 183 3.36e-23 93.6

Find 51 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGAAATTGATGATTATT+TGG 0.158426 2.4:-27344597 MS.gene92186:CDS
GGAGTGTCCCTGCTTGTTGC+TGG 0.253157 2.4:-27346647 MS.gene92186:CDS
GCTTTAACTGCTGTTGGTTC+TGG 0.266268 2.4:-27349852 MS.gene92186:CDS
GGGTCCTGATTTCCGAGTTT+TGG 0.297847 2.4:-27347918 MS.gene92186:CDS
CTGTATACAACACCTATATT+TGG 0.326037 2.4:+27348607 None:intergenic
CCCTTCCTTCAGTGTCAATA+TGG 0.330202 2.4:+27346125 None:intergenic
GAAGAAACTGCCATCTATAT+TGG 0.337394 2.4:-27349080 MS.gene92186:CDS
GATAGTGGTGTTAGGCCATT+TGG 0.346954 2.4:-27346668 MS.gene92186:intron
GTTGCTGGGTTTGATGATAA+TGG 0.347033 2.4:-27346632 MS.gene92186:CDS
ATGCAGGAATTTACTCAGTC+TGG 0.352073 2.4:-27347364 MS.gene92186:CDS
TTTGCCCTGATAGTGGTGTT+AGG 0.363096 2.4:-27346676 MS.gene92186:intron
AACATTGAAATCGGCATCAT+TGG 0.369450 2.4:-27345540 MS.gene92186:CDS
TTGTAGATACACTGATGATA+TGG 0.375486 2.4:-27346172 MS.gene92186:intron
CGAACCAAAACTCGGAAATC+AGG 0.376290 2.4:+27347914 None:intergenic
CAAATATAGGTGTTGTATAC+AGG 0.377485 2.4:-27348606 MS.gene92186:intron
GCAGTATCACCGATTGTATA+AGG 0.400018 2.4:-27347870 MS.gene92186:intron
GCTGAAATTGATGATTATTT+GGG 0.402207 2.4:-27344596 MS.gene92186:CDS
TTGGCATTTCCCAGGTTTGA+GGG 0.418418 2.4:-27345579 MS.gene92186:intron
TAATGGACCACAACTATATC+AGG 0.419917 2.4:-27346615 MS.gene92186:intron
TTGCTGTAGGTGGATCCATC+AGG 0.428961 2.4:-27346458 MS.gene92186:intron
GAGTGTCCCTGCTTGTTGCT+GGG 0.436297 2.4:-27346646 MS.gene92186:CDS
TTGGTTCTTGCAGCTGCAAA+TGG 0.438100 2.4:-27349121 MS.gene92186:intron
GCTTCATCAACCAATATAGA+TGG 0.444983 2.4:+27349070 None:intergenic
CAGTTATTAACACCAAATAT+AGG 0.451124 2.4:-27348619 MS.gene92186:CDS
TCTTGGAAAGCTTCTGCTAT+GGG 0.454997 2.4:-27346425 MS.gene92186:CDS
ACAAGTTGAGTGACAGGGAT+TGG 0.466755 2.4:+27347406 None:intergenic
TTCTTGGAAAGCTTCTGCTA+TGG 0.473689 2.4:-27346426 MS.gene92186:CDS
GAACATGCTTTAACTGCTGT+TGG 0.482096 2.4:-27349858 MS.gene92186:CDS
TCCCTCACAAGTTGAGTGAC+AGG 0.493790 2.4:+27347400 None:intergenic
GTTGGCATTTCCCAGGTTTG+AGG 0.504319 2.4:-27345580 MS.gene92186:intron
CTAAGACATTTCTTGAGAAG+AGG 0.508140 2.4:-27346385 MS.gene92186:intron
CATCAAACCCAGCAACAAGC+AGG 0.525359 2.4:+27346639 None:intergenic
GGTTCTGGACAAACTTCTCT+CGG 0.526164 2.4:-27349837 MS.gene92186:CDS
CAAACTTCTCTCGGTATCAA+AGG 0.527227 2.4:-27349828 MS.gene92186:intron
TATGGTGTACCTTATACAAT+CGG 0.527859 2.4:+27347861 None:intergenic
CCCTGTCACTCAACTTGTGA+GGG 0.529229 2.4:-27347401 MS.gene92186:CDS
AAATAATCATCAATTTCAGC+TGG 0.537679 2.4:+27344599 None:intergenic
TGCAGGAATTTACTCAGTCT+GGG 0.542143 2.4:-27347363 MS.gene92186:intron
GCCATATTGACACTGAAGGA+AGG 0.565690 2.4:-27346126 MS.gene92186:CDS
ACAAGCAGGGACACTCCAAA+TGG 0.570540 2.4:+27346653 None:intergenic
CCCTCACAAGTTGAGTGACA+GGG 0.583404 2.4:+27347401 None:intergenic
GGAAGTTGCTGCTGTCATGC+AGG 0.583748 2.4:-27347380 MS.gene92186:CDS
TGCCATACCTGATATAGTTG+TGG 0.596286 2.4:+27346608 None:intergenic
ATCAAACCCAGCAACAAGCA+GGG 0.606489 2.4:+27346640 None:intergenic
TCCCTGTCACTCAACTTGTG+AGG 0.608754 2.4:-27347402 MS.gene92186:CDS
CCATATTGACACTGAAGGAA+GGG 0.609464 2.4:-27346125 MS.gene92186:intron
CACAGCCATATTGACACTGA+AGG 0.611228 2.4:-27346130 MS.gene92186:CDS
CTTGGAAAGCTTCTGCTATG+GGG 0.618178 2.4:-27346424 MS.gene92186:CDS
ATCTGAACAAGCTTACCAGA+AGG 0.620962 2.4:+27349882 None:intergenic
AGATGGCAGTTTCTTCTCTG+TGG 0.628548 2.4:+27349087 None:intergenic
TCAGTGTCAATATGGCTGTG+TGG 0.671904 2.4:+27346133 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTCAAATGATAATAAA+GGG + chr2.4:27347799-27347818 None:intergenic 10.0%
!! GAAAAAAAAAAAAAAATATC+CGG - chr2.4:27348873-27348892 MS.gene92186:intron 10.0%
!! TAATATTCAAATGATAATAA+AGG + chr2.4:27347800-27347819 None:intergenic 10.0%
!! TTTGTAACTATATATATATT+TGG - chr2.4:27345344-27345363 MS.gene92186:intron 10.0%
!!! TAAATATGATATTTTCATTA+AGG + chr2.4:27348444-27348463 None:intergenic 10.0%
!!! TTTATTTTATTTTTTGTGAT+GGG + chr2.4:27347276-27347295 None:intergenic 10.0%
!!! TTTTATTTTATTTTTTGTGA+TGG + chr2.4:27347277-27347296 None:intergenic 10.0%
!!! TTTTTTTGTAACTATATTTT+TGG - chr2.4:27345367-27345386 MS.gene92186:intron 10.0%
!! AAACACAAATAAAAAGTAAA+CGG + chr2.4:27346927-27346946 None:intergenic 15.0%
!! AAATAAACAAATACTGAAAA+GGG + chr2.4:27349068-27349087 None:intergenic 15.0%
!! AAGGAAAAAGAAATTATTTA+AGG + chr2.4:27346892-27346911 None:intergenic 15.0%
!! ATATATGTTGCATAATTTAA+AGG + chr2.4:27349609-27349628 None:intergenic 15.0%
!! ATATTCAAATGATAATAAAG+GGG + chr2.4:27347798-27347817 None:intergenic 15.0%
!! ATTACATTAATCTCTAATAA+TGG + chr2.4:27348228-27348247 None:intergenic 15.0%
!! GAATAAACAAAAATTAGATA+AGG + chr2.4:27345602-27345621 None:intergenic 15.0%
!!! AATTAAAAGGTATAAATTTG+AGG - chr2.4:27349163-27349182 MS.gene92186:intron 15.0%
!!! ATAAAATTTTGTTCTATCAA+TGG + chr2.4:27345733-27345752 None:intergenic 15.0%
!!! TATCTAATTTTTGTTTATTC+TGG - chr2.4:27345602-27345621 MS.gene92186:intron 15.0%
!!! TATGCAACATATATTTTTAA+TGG - chr2.4:27349615-27349634 MS.gene92186:intron 15.0%
!!! TATTTCAATGTATTAGTTTA+AGG - chr2.4:27344782-27344801 MS.gene92186:intron 15.0%
!!! TTTATCGTTTAAATTTTACT+TGG - chr2.4:27346773-27346792 MS.gene92186:intron 15.0%
!!! TTTTTTTTCTTATTTTTTGC+TGG - chr2.4:27349780-27349799 MS.gene92186:intron 15.0%
!! AAATTTCTTATTAGTGATCT+TGG - chr2.4:27348665-27348684 MS.gene92186:intron 20.0%
!! AATAAACAAATACTGAAAAG+GGG + chr2.4:27349067-27349086 None:intergenic 20.0%
!! ATAACATAAACTTATATGCT+GGG + chr2.4:27347236-27347255 None:intergenic 20.0%
!! ATCCAATCTGAATAATTAAA+AGG - chr2.4:27349150-27349169 MS.gene92186:intron 20.0%
!! CAAATAAACAAATACTGAAA+AGG + chr2.4:27349069-27349088 None:intergenic 20.0%
!! GAAAAGAATTAAAAAGAAAG+AGG + chr2.4:27348840-27348859 None:intergenic 20.0%
!! GAAACAAACAACATAAAAAA+TGG + chr2.4:27348818-27348837 None:intergenic 20.0%
!!! AAGTTTGAAATGAGTTTAAA+AGG - chr2.4:27347540-27347559 MS.gene92186:intron 20.0%
!!! AATTTTTAGCTCAATTTGAT+CGG + chr2.4:27349118-27349137 None:intergenic 20.0%
!!! AGTTTAAGGTACATAAAATA+TGG - chr2.4:27344796-27344815 MS.gene92186:intron 20.0%
!!! AGTTTGTTAATTATATTGCA+GGG - chr2.4:27349877-27349896 MS.gene92186:CDS 20.0%
!!! ATAATTTCTTTTTCCTTTTC+TGG - chr2.4:27346895-27346914 MS.gene92186:intron 20.0%
!!! ATCAGAGTCTTAATATTTTT+GGG + chr2.4:27349698-27349717 None:intergenic 20.0%
!!! GTGTTAATAACTGAATTTTT+TGG + chr2.4:27345881-27345900 None:intergenic 20.0%
!!! GTTTAAGGTACATAAAATAT+GGG - chr2.4:27344797-27344816 MS.gene92186:intron 20.0%
!!! TAAAGTTACTGTACTTTTAA+GGG - chr2.4:27347998-27348017 MS.gene92186:intron 20.0%
!!! TACCTTTTAATTATTCAGAT+TGG + chr2.4:27349155-27349174 None:intergenic 20.0%
!!! TAGTTTGTTAATTATATTGC+AGG - chr2.4:27349876-27349895 MS.gene92186:CDS 20.0%
!!! TATCAGAGTCTTAATATTTT+TGG + chr2.4:27349699-27349718 None:intergenic 20.0%
!!! TATCTTTTGGTTTTCTATTA+TGG - chr2.4:27347027-27347046 MS.gene92186:intron 20.0%
!!! TTAAAGTTACTGTACTTTTA+AGG - chr2.4:27347997-27348016 MS.gene92186:intron 20.0%
!!! TTAATTTTTATGCAACTGTT+GGG - chr2.4:27347639-27347658 MS.gene92186:intron 20.0%
!!! TTCGTTGCATTTTATATTTA+GGG + chr2.4:27347716-27347735 None:intergenic 20.0%
!!! TTTAATTCTTAGAGTTGATT+AGG - chr2.4:27348460-27348479 MS.gene92186:intron 20.0%
! AAATAATCATCAATTTCAGC+TGG + chr2.4:27349911-27349930 None:intergenic 25.0%
! AACAAATCCACAAATCAAAT+CGG - chr2.4:27344860-27344879 MS.gene92186:intron 25.0%
! AACATAAAAAATGGCAATGA+AGG + chr2.4:27348809-27348828 None:intergenic 25.0%
! AACTATTAAGTTACCAAATC+AGG + chr2.4:27349861-27349880 None:intergenic 25.0%
! ACAAATTGCAGAAATAATAG+AGG + chr2.4:27345254-27345273 None:intergenic 25.0%
! ACATAAAAAATGGCAATGAA+GGG + chr2.4:27348808-27348827 None:intergenic 25.0%
! AGAAATAAACACACAAAAAC+TGG + chr2.4:27348496-27348515 None:intergenic 25.0%
! AGAGGATATTTGCAAATAAA+TGG + chr2.4:27345236-27345255 None:intergenic 25.0%
! AGTCACTGAAATGAATATTA+TGG - chr2.4:27349216-27349235 MS.gene92186:intron 25.0%
! ATAAACAAATACTGAAAAGG+GGG + chr2.4:27349066-27349085 None:intergenic 25.0%
! ATTCAAGATTTCATACATTC+TGG - chr2.4:27345823-27345842 MS.gene92186:intron 25.0%
! CAGTTATTAACACCAAATAT+AGG - chr2.4:27345888-27345907 MS.gene92186:intron 25.0%
! CATAACATAAACTTATATGC+TGG + chr2.4:27347237-27347256 None:intergenic 25.0%
! CGATTATCATCATATGTTAA+GGG - chr2.4:27347517-27347536 MS.gene92186:intron 25.0%
! GAATATTGCAATACATAGTA+TGG + chr2.4:27346667-27346686 None:intergenic 25.0%
! GAATCATATAGACCAAATAT+AGG + chr2.4:27346705-27346724 None:intergenic 25.0%
! GTGATATTTGCTTCATATTA+TGG - chr2.4:27345997-27346016 MS.gene92186:intron 25.0%
! GTTTATCTAATAATCCTTCT+CGG - chr2.4:27345624-27345643 MS.gene92186:intron 25.0%
! TAAGTTCAAACATGTTTGTA+TGG - chr2.4:27345954-27345973 MS.gene92186:intron 25.0%
! TATTTGAACTTTGTATCATC+TGG - chr2.4:27349083-27349102 MS.gene92186:CDS 25.0%
! TCAATAGTTTATCTCTTACA+AGG + chr2.4:27346400-27346419 None:intergenic 25.0%
! TCAGCAAAAAACATTGAAAT+CGG - chr2.4:27348958-27348977 MS.gene92186:intron 25.0%
! TCGATTATCATCATATGTTA+AGG - chr2.4:27347516-27347535 MS.gene92186:intron 25.0%
! TGAGCTAAAAATTATGCTAT+GGG - chr2.4:27349125-27349144 MS.gene92186:intron 25.0%
! TTAACATATGATGATAATCG+AGG + chr2.4:27347517-27347536 None:intergenic 25.0%
! TTACAAGCAATAGGAAATAA+AGG + chr2.4:27346827-27346846 None:intergenic 25.0%
! TTAGTTTCAAAGACTAACAA+AGG + chr2.4:27348899-27348918 None:intergenic 25.0%
! TTATATTTAGGGGTTCATTA+TGG + chr2.4:27347705-27347724 None:intergenic 25.0%
! TTGAGCTAAAAATTATGCTA+TGG - chr2.4:27349124-27349143 MS.gene92186:intron 25.0%
! TTGTGTGTATAAAAAAGAGT+CGG + chr2.4:27347753-27347772 None:intergenic 25.0%
! TTGTTCCCTAAAATATACTT+TGG - chr2.4:27349018-27349037 MS.gene92186:intron 25.0%
! TTTAATGCATAAACGTTACA+CGG + chr2.4:27348418-27348437 None:intergenic 25.0%
!! AGCTGAAATTGATGATTATT+TGG - chr2.4:27349910-27349929 MS.gene92186:CDS 25.0%
!! ATTAATGATGGCAATGTTTT+AGG - chr2.4:27348156-27348175 MS.gene92186:intron 25.0%
!! GAAGAAACATTTTGCTTAAA+CGG + chr2.4:27348519-27348538 None:intergenic 25.0%
!! GATAAACATTTTGTTCCTAT+TGG - chr2.4:27347675-27347694 MS.gene92186:intron 25.0%
!! GCTGAAATTGATGATTATTT+GGG - chr2.4:27349911-27349930 MS.gene92186:CDS 25.0%
!! GTTAATTTTTATGCAACTGT+TGG - chr2.4:27347638-27347657 MS.gene92186:intron 25.0%
!! GTTCGTTGCATTTTATATTT+AGG + chr2.4:27347717-27347736 None:intergenic 25.0%
!! TCGTTGCATTTTATATTTAG+GGG + chr2.4:27347715-27347734 None:intergenic 25.0%
!! TCTTTCATTTCATTTTGTCT+GGG + chr2.4:27346088-27346107 None:intergenic 25.0%
!! TTCTTTCATTTCATTTTGTC+TGG + chr2.4:27346089-27346108 None:intergenic 25.0%
!! TTGTCTTTTCTGTTATCTTT+TGG - chr2.4:27347014-27347033 MS.gene92186:intron 25.0%
!!! AACTTTGAAAAGCATCAAAA+TGG + chr2.4:27347441-27347460 None:intergenic 25.0%
!!! ACTTTGAAAAGCATCAAAAT+GGG + chr2.4:27347440-27347459 None:intergenic 25.0%
!!! ATTTTATTTTTTGTGATGGG+AGG + chr2.4:27347273-27347292 None:intergenic 25.0%
!!! GCAACATATATTTTTAATGG+AGG - chr2.4:27349618-27349637 MS.gene92186:intron 25.0%
!!! TCAATTTTGTTTTTGTTCAG+TGG - chr2.4:27346563-27346582 MS.gene92186:intron 25.0%
!!! TCAGTAAGTTGTTTTTTCTT+TGG - chr2.4:27345461-27345480 MS.gene92186:intron 25.0%
!!! TTTCTAACTTTGATTTTGTG+TGG - chr2.4:27345281-27345300 MS.gene92186:intron 25.0%
!!! TTTGTTTTGAATACCTGATT+TGG - chr2.4:27349845-27349864 MS.gene92186:CDS 25.0%
!!! TTTTATTTTTTGTGATGGGA+GGG + chr2.4:27347272-27347291 None:intergenic 25.0%
!!! TTTTCTTATTTTTTGCTGGT+GGG - chr2.4:27349784-27349803 MS.gene92186:intron 25.0%
!!! TTTTGTTTTACCAATGCAAA+TGG - chr2.4:27349725-27349744 MS.gene92186:intron 25.0%
!!! TTTTTCCTTATTAGAAGCAT+GGG - chr2.4:27344950-27344969 MS.gene92186:intron 25.0%
!!! TTTTTCTTATTTTTTGCTGG+TGG - chr2.4:27349783-27349802 MS.gene92186:intron 25.0%
AAACAAAAACTTGAGCTTAC+TGG + chr2.4:27349832-27349851 None:intergenic 30.0%
AAATACACGTTCTTTCAGAA+AGG + chr2.4:27347594-27347613 None:intergenic 30.0%
AAGATAACAGAAAAGACAAC+TGG + chr2.4:27347013-27347032 None:intergenic 30.0%
AAGGATGCTGAGTAATTTAA+AGG + chr2.4:27345583-27345602 None:intergenic 30.0%
AATAAGAACCCTAAAACATG+AGG + chr2.4:27344750-27344769 None:intergenic 30.0%
AATATCAAATTCCGAAGTAC+AGG + chr2.4:27346744-27346763 None:intergenic 30.0%
AATGAAAATGCACCTAAGAT+TGG - chr2.4:27348589-27348608 MS.gene92186:intron 30.0%
AATGGAGGCTAATTAAAATC+AGG - chr2.4:27349633-27349652 MS.gene92186:intron 30.0%
AATGGGTACTTCATATTGAT+TGG + chr2.4:27347423-27347442 None:intergenic 30.0%
AATTGGATACAATCTTGAAG+TGG + chr2.4:27345534-27345553 None:intergenic 30.0%
ACATAGCTGAATTATATCCA+AGG - chr2.4:27346156-27346175 MS.gene92186:CDS 30.0%
ACATGGTTACAAACTTAAAG+TGG + chr2.4:27349473-27349492 None:intergenic 30.0%
AGGATGCTGAGTAATTTAAA+GGG + chr2.4:27345582-27345601 None:intergenic 30.0%
ATACTGTAAGTGAAAATTGC+AGG - chr2.4:27347076-27347095 MS.gene92186:intron 30.0%
ATCATCAGTGTATCTACAAT+TGG + chr2.4:27348334-27348353 None:intergenic 30.0%
ATGATAATAAAGGGGAGAAA+TGG + chr2.4:27347790-27347809 None:intergenic 30.0%
ATGCTTCAGTACTATCATAA+TGG - chr2.4:27345180-27345199 MS.gene92186:intron 30.0%
ATTCTGTGAAAACTGTTTCA+AGG + chr2.4:27346318-27346337 None:intergenic 30.0%
ATTGGATACAATCTTGAAGT+GGG + chr2.4:27345533-27345552 None:intergenic 30.0%
ATTTACATTGTTCGACAAAC+TGG - chr2.4:27349670-27349689 MS.gene92186:intron 30.0%
CAAGAAAAATATGAACCTGA+TGG + chr2.4:27348067-27348086 None:intergenic 30.0%
CATAGCTGAATTATATCCAA+GGG - chr2.4:27346157-27346176 MS.gene92186:CDS 30.0%
CCTAAAACATGAGGAAAAAA+GGG + chr2.4:27344741-27344760 None:intergenic 30.0%
CTGTATACAACACCTATATT+TGG + chr2.4:27345903-27345922 None:intergenic 30.0%
CTTCAAGATTGTATCCAATT+TGG - chr2.4:27345534-27345553 MS.gene92186:CDS 30.0%
GAAAGTGAAAACCACAAAAT+TGG + chr2.4:27349354-27349373 None:intergenic 30.0%
GCAATAGGAAATAAAGGAAT+AGG + chr2.4:27346821-27346840 None:intergenic 30.0%
GCTGTGAAGTTATAAATTCT+TGG - chr2.4:27349381-27349400 MS.gene92186:intron 30.0%
GGTTCAACTGAAAAATATTG+AGG - chr2.4:27348618-27348637 MS.gene92186:CDS 30.0%
GTATGCTTTCACATTAATGA+TGG - chr2.4:27348144-27348163 MS.gene92186:intron 30.0%
GTTCATTATGGAATTCCAAT+AGG + chr2.4:27347693-27347712 None:intergenic 30.0%
TAAAATGCAACGAACTTAGT+TGG - chr2.4:27347722-27347741 MS.gene92186:intron 30.0%
TATCTACAATTGGACAATCA+AGG + chr2.4:27348324-27348343 None:intergenic 30.0%
TATGGTGTACCTTATACAAT+CGG + chr2.4:27346649-27346668 None:intergenic 30.0%
TGAATATGTTCTTAAACACG+AGG - chr2.4:27346038-27346057 MS.gene92186:intron 30.0%
TGTACTTCGGAATTTGATAT+TGG - chr2.4:27346743-27346762 MS.gene92186:intron 30.0%
TTCGGAATTTGATATTGGAA+TGG - chr2.4:27346748-27346767 MS.gene92186:intron 30.0%
TTCTTATATCGTGATAGTTG+AGG - chr2.4:27345683-27345702 MS.gene92186:intron 30.0%
TTGTAGATACACTGATGATA+TGG - chr2.4:27348335-27348354 MS.gene92186:intron 30.0%
TTTATCATACACTAACTGAC+AGG + chr2.4:27348541-27348560 None:intergenic 30.0%
! AACTTGTTCATATTGCACAT+AGG - chr2.4:27345206-27345225 MS.gene92186:intron 30.0%
! AGGTATAAATTTGAGGCATA+TGG - chr2.4:27349170-27349189 MS.gene92186:intron 30.0%
! AGTCAGCCAAAGTATATTTT+AGG + chr2.4:27349027-27349046 None:intergenic 30.0%
! CAAATATAGGTGTTGTATAC+AGG - chr2.4:27345901-27345920 MS.gene92186:intron 30.0%
! CATCAGGTTCATATTTTTCT+TGG - chr2.4:27348065-27348084 MS.gene92186:intron 30.0%
! CTTTTTCCTTATTAGAAGCA+TGG - chr2.4:27344949-27344968 MS.gene92186:intron 30.0%
! GGTATAAATTTGAGGCATAT+GGG - chr2.4:27349171-27349190 MS.gene92186:intron 30.0%
! GTCAGCCAAAGTATATTTTA+GGG + chr2.4:27349026-27349045 None:intergenic 30.0%
! TTCTGAAAGAACGTGTATTT+GGG - chr2.4:27347594-27347613 MS.gene92186:intron 30.0%
! TTGAAACTAATCCCTTTTGT+TGG - chr2.4:27348909-27348928 MS.gene92186:intron 30.0%
! TTGATGCTTTTCAAAGTTGA+TGG - chr2.4:27347443-27347462 MS.gene92186:intron 30.0%
! TTTCTGAAAGAACGTGTATT+TGG - chr2.4:27347593-27347612 MS.gene92186:intron 30.0%
! TTTGTTATACATTTGCACCA+TGG - chr2.4:27349243-27349262 MS.gene92186:intron 30.0%
!! CAATGTTTTAGGCAAATATG+CGG - chr2.4:27348167-27348186 MS.gene92186:intron 30.0%
!! TACTTTTAAGGGAAAGAGAA+GGG - chr2.4:27348009-27348028 MS.gene92186:intron 30.0%
!!! CCTTTTTTCCTCATGTTTTA+GGG - chr2.4:27344739-27344758 MS.gene92186:intron 30.0%
!!! TTTCTTATTTTTTGCTGGTG+GGG - chr2.4:27349785-27349804 MS.gene92186:intron 30.0%
AAACATGAGGAAAAAAGGGT+TGG + chr2.4:27344737-27344756 None:intergenic 35.0%
AAAGCTTAGATCAAGTCCTT+TGG - chr2.4:27349270-27349289 MS.gene92186:intron 35.0%
AAATCCACAAATCAAATCGG+TGG - chr2.4:27344863-27344882 MS.gene92186:intron 35.0%
AACATTGAAATCGGCATCAT+TGG - chr2.4:27348967-27348986 MS.gene92186:intron 35.0%
AAGCTTAGATCAAGTCCTTT+GGG - chr2.4:27349271-27349290 MS.gene92186:intron 35.0%
ACAACATAATAGAGACTGTC+GGG + chr2.4:27349416-27349435 None:intergenic 35.0%
ACTATATCAGGTATGGCATA+TGG - chr2.4:27347904-27347923 MS.gene92186:CDS 35.0%
AGAGAAATAACGTGTAATCC+AGG - chr2.4:27347310-27347329 MS.gene92186:intron 35.0%
ATAAATAGGGGGAATCAGTT+TGG + chr2.4:27346246-27346265 None:intergenic 35.0%
ATACAAGTTCAATCTACCAC+TGG + chr2.4:27344999-27345018 None:intergenic 35.0%
ATGAATTGATAGAGATGTCG+AGG + chr2.4:27348294-27348313 None:intergenic 35.0%
ATGACAAGATACAAGATGGA+GGG + chr2.4:27349547-27349566 None:intergenic 35.0%
CAACAGCAATGGAAAAAAGT+AGG + chr2.4:27346478-27346497 None:intergenic 35.0%
CAATGTTGTAACCTGTACTT+CGG - chr2.4:27346730-27346749 MS.gene92186:intron 35.0%
CATGATGACAAGATACAAGA+TGG + chr2.4:27349551-27349570 None:intergenic 35.0%
CCCTAAAACATGAGGAAAAA+AGG + chr2.4:27344742-27344761 None:intergenic 35.0%
CCTAACTCATTACAAGCAAT+AGG + chr2.4:27346836-27346855 None:intergenic 35.0%
CCTATTGCTTGTAATGAGTT+AGG - chr2.4:27346833-27346852 MS.gene92186:intron 35.0%
CTAAGACATTTCTTGAGAAG+AGG - chr2.4:27348122-27348141 MS.gene92186:intron 35.0%
CTTCATATTATGGCAGTTGA+TGG - chr2.4:27346007-27346026 MS.gene92186:intron 35.0%
GAAAACCACAAAATTGGACA+TGG + chr2.4:27349348-27349367 None:intergenic 35.0%
GAAAGAGAAGGGAAAATTGA+AGG - chr2.4:27348020-27348039 MS.gene92186:intron 35.0%
GAAGAAACTGCCATCTATAT+TGG - chr2.4:27345427-27345446 MS.gene92186:intron 35.0%
GACAACATAATAGAGACTGT+CGG + chr2.4:27349417-27349436 None:intergenic 35.0%
GATAAAACACCAACTTTACC+TGG + chr2.4:27347331-27347350 None:intergenic 35.0%
GATTCATCAAGTACTTCAGA+GGG + chr2.4:27346221-27346240 None:intergenic 35.0%
GCTTCATCAACCAATATAGA+TGG + chr2.4:27345440-27345459 None:intergenic 35.0%
GGATGCTGAGTAATTTAAAG+GGG + chr2.4:27345581-27345600 None:intergenic 35.0%
GGTTACAAACTTAAAGTGGA+GGG + chr2.4:27349469-27349488 None:intergenic 35.0%
GTTGAGGATACTTGAAAGTA+TGG - chr2.4:27345699-27345718 MS.gene92186:intron 35.0%
TACAAGTTCAATCTACCACT+GGG + chr2.4:27344998-27345017 None:intergenic 35.0%
TCTGAAAGAACGTGTATTTG+GGG - chr2.4:27347595-27347614 MS.gene92186:intron 35.0%
TGATTCATCAAGTACTTCAG+AGG + chr2.4:27346222-27346241 None:intergenic 35.0%
TGCTACTCACAAAATGCATT+GGG + chr2.4:27349758-27349777 None:intergenic 35.0%
TGGTTACAAACTTAAAGTGG+AGG + chr2.4:27349470-27349489 None:intergenic 35.0%
TGTGCAGGATAAGTTATGTT+GGG - chr2.4:27345113-27345132 MS.gene92186:intron 35.0%
TGTGTATAAAAAAGAGTCGG+AGG + chr2.4:27347750-27347769 None:intergenic 35.0%
TTATATGCTGGGAGTAGATA+TGG + chr2.4:27347225-27347244 None:intergenic 35.0%
TTGCTACTCACAAAATGCAT+TGG + chr2.4:27349759-27349778 None:intergenic 35.0%
TTGTTCATATTGCACATAGG+AGG - chr2.4:27345209-27345228 MS.gene92186:intron 35.0%
TTGTTCTATCAATGGCCAAT+TGG + chr2.4:27345725-27345744 None:intergenic 35.0%
TTTCAAAGACTAACAAAGGC+CGG + chr2.4:27348895-27348914 None:intergenic 35.0%
TTTCCGAGTTCACTTTATCT+CGG - chr2.4:27344920-27344939 MS.gene92186:intron 35.0%
! AAATTTGAGGCATATGGGTT+AGG - chr2.4:27349176-27349195 MS.gene92186:intron 35.0%
! CAGCTCATGATGATTTTACA+GGG + chr2.4:27348709-27348728 None:intergenic 35.0%
! CATGATGATTTTACAGGGAT+GGG + chr2.4:27348704-27348723 None:intergenic 35.0%
! CTTACAACTTTTAGTCCTTC+TGG - chr2.4:27344610-27344629 MS.gene92186:CDS 35.0%
! GAAGCCTTGTGAGTTTATTT+GGG - chr2.4:27345085-27345104 MS.gene92186:intron 35.0%
! GTGCTATTGAAGTTTCTGTT+AGG - chr2.4:27346060-27346079 MS.gene92186:intron 35.0%
! TAATGGACCACAACTATATC+AGG - chr2.4:27347892-27347911 MS.gene92186:CDS 35.0%
! TACTTGAAAGTATGGCCAAT+TGG - chr2.4:27345707-27345726 MS.gene92186:intron 35.0%
! TCATGATGATTTTACAGGGA+TGG + chr2.4:27348705-27348724 None:intergenic 35.0%
! TGAAGCCTTGTGAGTTTATT+TGG - chr2.4:27345084-27345103 MS.gene92186:intron 35.0%
! TGATCTAAGCTTTTTGACCA+TGG + chr2.4:27349263-27349282 None:intergenic 35.0%
!! AGGTGATGGGTTAGATAAAT+AGG + chr2.4:27346260-27346279 None:intergenic 35.0%
!! CCAAAAACTCAAAGTTGATG+AGG + chr2.4:27347353-27347372 None:intergenic 35.0%
!! CCTCATCAACTTTGAGTTTT+TGG - chr2.4:27347350-27347369 MS.gene92186:intron 35.0%
!! GGTGATGGGTTAGATAAATA+GGG + chr2.4:27346259-27346278 None:intergenic 35.0%
!! GTACTTTTAAGGGAAAGAGA+AGG - chr2.4:27348008-27348027 MS.gene92186:intron 35.0%
!! GTGATGGGTTAGATAAATAG+GGG + chr2.4:27346258-27346277 None:intergenic 35.0%
!! TGATGGGTTAGATAAATAGG+GGG + chr2.4:27346257-27346276 None:intergenic 35.0%
!! TGTGTTTGATTAGTTTGCAC+TGG - chr2.4:27347946-27347965 MS.gene92186:intron 35.0%
!!! CCCTTTTTTCCTCATGTTTT+AGG - chr2.4:27344738-27344757 MS.gene92186:intron 35.0%
!!! TGCTTTTTCGAACCAAAACT+CGG + chr2.4:27346604-27346623 None:intergenic 35.0%
!!! TTCTTTTTTTGCCCTGATAG+TGG - chr2.4:27347824-27347843 MS.gene92186:intron 35.0%
!!! TTGAAGGTTGTTTTTGCTGT+AGG - chr2.4:27348036-27348055 MS.gene92186:intron 35.0%
!!! TTGTTTTTGTTCAGTGGCAT+GGG - chr2.4:27346569-27346588 MS.gene92186:intron 35.0%
!!! TTTGTTTTTGTTCAGTGGCA+TGG - chr2.4:27346568-27346587 MS.gene92186:intron 35.0%
AAACGATAGCACAGCCAAAT+TGG + chr2.4:27345551-27345570 None:intergenic 40.0%
ACGTGTAATCCAGGTAAAGT+TGG - chr2.4:27347319-27347338 MS.gene92186:intron 40.0%
ACTGTTTCAAGGAGTTACTC+AGG + chr2.4:27346307-27346326 None:intergenic 40.0%
AGACCAAATATAGGCAGAAC+AGG + chr2.4:27346696-27346715 None:intergenic 40.0%
AGGGTTTGTAAACGAAAGGA+GGG + chr2.4:27346202-27346221 None:intergenic 40.0%
AGTTCCTAATCCAACAAGCT+TGG + chr2.4:27348751-27348770 None:intergenic 40.0%
ATCTGAACAAGCTTACCAGA+AGG + chr2.4:27344628-27344647 None:intergenic 40.0%
ATGCAGGAATTTACTCAGTC+TGG - chr2.4:27347143-27347162 MS.gene92186:intron 40.0%
CAAAACCAAACAACACCCAA+AGG + chr2.4:27349289-27349308 None:intergenic 40.0%
CAAACTTCTCTCGGTATCAA+AGG - chr2.4:27344679-27344698 MS.gene92186:intron 40.0%
CACAAAATTGGACATGGTGT+TGG + chr2.4:27349342-27349361 None:intergenic 40.0%
CATGCCCAAATAAACTCACA+AGG + chr2.4:27345092-27345111 None:intergenic 40.0%
CCATATTGACACTGAAGGAA+GGG - chr2.4:27348382-27348401 MS.gene92186:intron 40.0%
CTCTTTGTTCATATGACTGC+AGG - chr2.4:27345854-27345873 MS.gene92186:intron 40.0%
CTGTTTCAAGGAGTTACTCA+GGG + chr2.4:27346306-27346325 None:intergenic 40.0%
CTTCCTGTTCTGCCTATATT+TGG - chr2.4:27346690-27346709 MS.gene92186:intron 40.0%
CTTGTATGATTGTCGTCTGA+TGG - chr2.4:27345012-27345031 MS.gene92186:intron 40.0%
CTTGTGAGTTTATTTGGGCA+TGG - chr2.4:27345090-27345109 MS.gene92186:intron 40.0%
GAAAGTCCACAAACAACTTG+CGG + chr2.4:27345763-27345782 None:intergenic 40.0%
GAACATGCTTTAACTGCTGT+TGG - chr2.4:27344649-27344668 MS.gene92186:intron 40.0%
GACCACAACTATATCAGGTA+TGG - chr2.4:27347897-27347916 MS.gene92186:CDS 40.0%
GATGACAAGATACAAGATGG+AGG + chr2.4:27349548-27349567 None:intergenic 40.0%
GGGAAGTTATCCATTTGCAT+TGG + chr2.4:27349738-27349757 None:intergenic 40.0%
GTACCGAGATAAAGTGAACT+CGG + chr2.4:27344926-27344945 None:intergenic 40.0%
GTGATCTTGGCATATACCAA+AGG - chr2.4:27348678-27348697 MS.gene92186:intron 40.0%
GTGTGCAGGATAAGTTATGT+TGG - chr2.4:27345112-27345131 MS.gene92186:intron 40.0%
TAAACGGCACTATCCAGAAA+AGG + chr2.4:27346911-27346930 None:intergenic 40.0%
TACCAAAAGCTCAACAGCAA+TGG + chr2.4:27346489-27346508 None:intergenic 40.0%
TAGTTTCCGCAAGTTGTTTG+TGG - chr2.4:27345754-27345773 MS.gene92186:intron 40.0%
TCAGAGGGTTTGTAAACGAA+AGG + chr2.4:27346206-27346225 None:intergenic 40.0%
TCTCAAATACTAAGCCGAGA+AGG + chr2.4:27345641-27345660 None:intergenic 40.0%
TCTTGGAAAGCTTCTGCTAT+GGG - chr2.4:27348082-27348101 MS.gene92186:intron 40.0%
TGAACCAAGAAGCCAATCTT+AGG + chr2.4:27348604-27348623 None:intergenic 40.0%
TGACAAGATACAAGATGGAG+GGG + chr2.4:27349546-27349565 None:intergenic 40.0%
TGCAGGAATTTACTCAGTCT+GGG - chr2.4:27347144-27347163 MS.gene92186:intron 40.0%
TGCCATACCTGATATAGTTG+TGG + chr2.4:27347902-27347921 None:intergenic 40.0%
TTCTTGGAAAGCTTCTGCTA+TGG - chr2.4:27348081-27348100 MS.gene92186:intron 40.0%
TTGGAGCCTTGCTAACATAA+AGG + chr2.4:27348732-27348751 None:intergenic 40.0%
TTGGTGCAGACAAAAAGTTC+AGG - chr2.4:27348986-27349005 MS.gene92186:intron 40.0%
! AAGGGTTTTCCCTTCACAAA+AGG - chr2.4:27346175-27346194 MS.gene92186:intron 40.0%
! ATGATTGTCGTCTGATGGAT+AGG - chr2.4:27345017-27345036 MS.gene92186:intron 40.0%
! CAAATCGGTGGACTTGATTT+CGG - chr2.4:27344875-27344894 MS.gene92186:intron 40.0%
! CAACACCATGTCCAATTTTG+TGG - chr2.4:27349340-27349359 MS.gene92186:intron 40.0%
! GAGCTTTTGGTATATGACAG+TGG - chr2.4:27346497-27346516 MS.gene92186:intron 40.0%
! GCAGCTCATGATGATTTTAC+AGG + chr2.4:27348710-27348729 None:intergenic 40.0%
! GCAGTATCACCGATTGTATA+AGG - chr2.4:27346637-27346656 MS.gene92186:CDS 40.0%
! GTTGCTGGGTTTGATGATAA+TGG - chr2.4:27347875-27347894 MS.gene92186:CDS 40.0%
! TTTTGTGAAGGGAAAACCCT+TGG + chr2.4:27346176-27346195 None:intergenic 40.0%
!! AAGTCCACCGATTTGATTTG+TGG + chr2.4:27344870-27344889 None:intergenic 40.0%
!! TTCCATTGCTGTTGAGCTTT+TGG - chr2.4:27346484-27346503 MS.gene92186:intron 40.0%
!!! AAGGTTGTTTTTGCTGTAGG+TGG - chr2.4:27348039-27348058 MS.gene92186:intron 40.0%
!!! GAGTTTTGGTTCGAAAAAGC+AGG - chr2.4:27346603-27346622 MS.gene92186:intron 40.0%
AAGTTCAATCTACCACTGGG+AGG + chr2.4:27344995-27345014 None:intergenic 45.0%
AATGGCCTAACACCACTATC+AGG + chr2.4:27347839-27347858 None:intergenic 45.0%
ACCTGGGAAATGCCAACAAA+AGG + chr2.4:27348924-27348943 None:intergenic 45.0%
AGATGGCAGTTTCTTCTCTG+TGG + chr2.4:27345423-27345442 None:intergenic 45.0%
AGTTCAATCTACCACTGGGA+GGG + chr2.4:27344994-27345013 None:intergenic 45.0%
ATCAAACCCAGCAACAAGCA+GGG + chr2.4:27347870-27347889 None:intergenic 45.0%
ATGGCCTAACACCACTATCA+GGG + chr2.4:27347838-27347857 None:intergenic 45.0%
ATTGACACTGAAGGAAGGGT+AGG - chr2.4:27348386-27348405 MS.gene92186:intron 45.0%
CACAGCCATATTGACACTGA+AGG - chr2.4:27348377-27348396 MS.gene92186:intron 45.0%
CCCTTCCTTCAGTGTCAATA+TGG + chr2.4:27348385-27348404 None:intergenic 45.0%
CCTGGGAAATGCCAACAAAA+GGG + chr2.4:27348923-27348942 None:intergenic 45.0%
CGAACCAAAACTCGGAAATC+AGG + chr2.4:27346596-27346615 None:intergenic 45.0%
CTTGGAAAGCTTCTGCTATG+GGG - chr2.4:27348083-27348102 MS.gene92186:intron 45.0%
GAGCTGCCTTTATGTTAGCA+AGG - chr2.4:27348723-27348742 MS.gene92186:intron 45.0%
GAGGGTTTGTAAACGAAAGG+AGG + chr2.4:27346203-27346222 None:intergenic 45.0%
GCAGGATAAGTTATGTTGGG+AGG - chr2.4:27345116-27345135 MS.gene92186:intron 45.0%
GCCATATTGACACTGAAGGA+AGG - chr2.4:27348381-27348400 MS.gene92186:intron 45.0%
GGAAGGGATTAGAAGGTGAT+GGG + chr2.4:27346273-27346292 None:intergenic 45.0%
GGTTCGAAAAAGCAGGAAAC+AGG - chr2.4:27346610-27346629 MS.gene92186:intron 45.0%
TAATAGAGACTGTCGGGCAA+CGG + chr2.4:27349410-27349429 None:intergenic 45.0%
TCAAGGAGTTACTCAGGGAT+AGG + chr2.4:27346301-27346320 None:intergenic 45.0%
TCAGTGTCAATATGGCTGTG+TGG + chr2.4:27348377-27348396 None:intergenic 45.0%
TGGAAGGGATTAGAAGGTGA+TGG + chr2.4:27346274-27346293 None:intergenic 45.0%
TTGGCATTTCCCAGGTTTGA+GGG - chr2.4:27348928-27348947 MS.gene92186:intron 45.0%
TTTATTTGGGCATGGTGTGC+AGG - chr2.4:27345098-27345117 MS.gene92186:intron 45.0%
! AAAGGAGGGACCTTTTGTGA+AGG + chr2.4:27346188-27346207 None:intergenic 45.0%
! AAGGAGGGACCTTTTGTGAA+GGG + chr2.4:27346187-27346206 None:intergenic 45.0%
! ACAAGTTGAGTGACAGGGAT+TGG + chr2.4:27347104-27347123 None:intergenic 45.0%
! ATTTTACAGGGATGGGCCTT+TGG + chr2.4:27348697-27348716 None:intergenic 45.0%
! CCTTATTAGAAGCATGGGCA+GGG - chr2.4:27344955-27344974 MS.gene92186:intron 45.0%
! GATAGTGGTGTTAGGCCATT+TGG - chr2.4:27347839-27347858 MS.gene92186:intron 45.0%
! GGGGTATTTGACAACAATGG+AGG + chr2.4:27349527-27349546 None:intergenic 45.0%
! TCCTTATTAGAAGCATGGGC+AGG - chr2.4:27344954-27344973 MS.gene92186:intron 45.0%
! TTGGTTCTTGCAGCTGCAAA+TGG - chr2.4:27345386-27345405 MS.gene92186:intron 45.0%
!! CAAGTCCTTTGGGTGTTGTT+TGG - chr2.4:27349281-27349300 MS.gene92186:intron 45.0%
!! GCTTTAACTGCTGTTGGTTC+TGG - chr2.4:27344655-27344674 MS.gene92186:intron 45.0%
!! GGAGGGGTATTTGACAACAA+TGG + chr2.4:27349530-27349549 None:intergenic 45.0%
!! GGTTCTGGACAAACTTCTCT+CGG - chr2.4:27344670-27344689 MS.gene92186:intron 45.0%
!! TATGGGTTAGGACTGCGAAA+TGG - chr2.4:27349188-27349207 MS.gene92186:intron 45.0%
!! TGCACCTAAGATTGGCTTCT+TGG - chr2.4:27348597-27348616 MS.gene92186:intron 45.0%
!! TTTGCCCTGATAGTGGTGTT+AGG - chr2.4:27347831-27347850 MS.gene92186:intron 45.0%
!!! CTTATTTTTTGCTGGTGGGG+TGG - chr2.4:27349788-27349807 MS.gene92186:intron 45.0%
!!! ATTTTTTTTTTTTTTTCTTT+TGG + chr2.4:27348870-27348889 None:intergenic 5.0%
AATAGAGACTGTCGGGCAAC+GGG + chr2.4:27349409-27349428 None:intergenic 50.0%
ACAAGCAGGGACACTCCAAA+TGG + chr2.4:27347857-27347876 None:intergenic 50.0%
ATACCACACGTAGACGGGAA+TGG + chr2.4:27349504-27349523 None:intergenic 50.0%
CATCAAACCCAGCAACAAGC+AGG + chr2.4:27347871-27347890 None:intergenic 50.0%
CCCTGCCCATGCTTCTAATA+AGG + chr2.4:27344958-27344977 None:intergenic 50.0%
CCCTGTCACTCAACTTGTGA+GGG - chr2.4:27347106-27347125 MS.gene92186:intron 50.0%
GAGATCTGTCCCTCAAACCT+GGG + chr2.4:27348940-27348959 None:intergenic 50.0%
GGCAGTTGGAAGGGATTAGA+AGG + chr2.4:27346280-27346299 None:intergenic 50.0%
GTTACTCAGGGATAGGCAGT+TGG + chr2.4:27346294-27346313 None:intergenic 50.0%
GTTGGCATTTCCCAGGTTTG+AGG - chr2.4:27348927-27348946 MS.gene92186:intron 50.0%
TAGCAAGGCTCCAAGCTTGT+TGG - chr2.4:27348738-27348757 MS.gene92186:intron 50.0%
TCAGGGATAGGCAGTTGGAA+GGG + chr2.4:27346289-27346308 None:intergenic 50.0%
TCCCTGTCACTCAACTTGTG+AGG - chr2.4:27347105-27347124 MS.gene92186:intron 50.0%
TGAGATCTGTCCCTCAAACC+TGG + chr2.4:27348941-27348960 None:intergenic 50.0%
TGGAGGATACCACACGTAGA+CGG + chr2.4:27349510-27349529 None:intergenic 50.0%
TTAACTTCTGTCCCTCCCAG+TGG - chr2.4:27344980-27344999 MS.gene92186:intron 50.0%
TTGCTGTAGGTGGATCCATC+AGG - chr2.4:27348049-27348068 MS.gene92186:intron 50.0%
! CCCTCACAAGTTGAGTGACA+GGG + chr2.4:27347109-27347128 None:intergenic 50.0%
! CCCTTTTGTTGGCATTTCCC+AGG - chr2.4:27348920-27348939 MS.gene92186:intron 50.0%
! GGGTCCTGATTTCCGAGTTT+TGG - chr2.4:27346589-27346608 MS.gene92186:intron 50.0%
! TCCCTCACAAGTTGAGTGAC+AGG + chr2.4:27347110-27347129 None:intergenic 50.0%
!! GGCTCCAAGCTTGTTGGATT+AGG - chr2.4:27348744-27348763 MS.gene92186:intron 50.0%
ATAGAGACTGTCGGGCAACG+GGG + chr2.4:27349408-27349427 None:intergenic 55.0%
CGGGAATGGAGCATGCAACA+TGG + chr2.4:27349490-27349509 None:intergenic 55.0%
CTCAGGGATAGGCAGTTGGA+AGG + chr2.4:27346290-27346309 None:intergenic 55.0%
GGAAGTTGCTGCTGTCATGC+AGG - chr2.4:27347127-27347146 MS.gene92186:intron 55.0%
GGAGGATACCACACGTAGAC+GGG + chr2.4:27349509-27349528 None:intergenic 55.0%
TTTGCTGGTGGGGTGGCATT+GGG - chr2.4:27349795-27349814 MS.gene92186:intron 55.0%
! AGGGTGTTTAGTGCGAGTGG+AGG + chr2.4:27349450-27349469 None:intergenic 55.0%
! GAGTGTCCCTGCTTGTTGCT+GGG - chr2.4:27347861-27347880 MS.gene92186:intron 55.0%
! TTTTGCTGGTGGGGTGGCAT+TGG - chr2.4:27349794-27349813 MS.gene92186:intron 55.0%
!! AGTGCGAGTGGAGGAGTACT+AGG + chr2.4:27349441-27349460 None:intergenic 55.0%
!! TGGAGGGTGTTTAGTGCGAG+TGG + chr2.4:27349453-27349472 None:intergenic 55.0%
GCTCCATTCCCGTCTACGTG+TGG - chr2.4:27349498-27349517 MS.gene92186:intron 60.0%
TTGCTGGTGGGGTGGCATTG+GGG - chr2.4:27349796-27349815 MS.gene92186:intron 60.0%
! GGAGTGTCCCTGCTTGTTGC+TGG - chr2.4:27347860-27347879 MS.gene92186:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 27344583 27349946 27344583 ID=MS.gene92186
chr2.4 mRNA 27344583 27349946 27344583 ID=MS.gene92186.t1;Parent=MS.gene92186
chr2.4 exon 27349829 27349946 27349829 ID=MS.gene92186.t1.exon1;Parent=MS.gene92186.t1
chr2.4 CDS 27349829 27349946 27349829 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27349066 27349130 27349066 ID=MS.gene92186.t1.exon2;Parent=MS.gene92186.t1
chr2.4 CDS 27349066 27349130 27349066 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27348607 27348653 27348607 ID=MS.gene92186.t1.exon3;Parent=MS.gene92186.t1
chr2.4 CDS 27348607 27348653 27348607 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27347871 27347946 27347871 ID=MS.gene92186.t1.exon4;Parent=MS.gene92186.t1
chr2.4 CDS 27347871 27347946 27347871 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27347364 27347431 27347364 ID=MS.gene92186.t1.exon5;Parent=MS.gene92186.t1
chr2.4 CDS 27347364 27347431 27347364 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27346616 27346685 27346616 ID=MS.gene92186.t1.exon6;Parent=MS.gene92186.t1
chr2.4 CDS 27346616 27346685 27346616 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27346386 27346471 27346386 ID=MS.gene92186.t1.exon7;Parent=MS.gene92186.t1
chr2.4 CDS 27346386 27346471 27346386 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27346126 27346188 27346126 ID=MS.gene92186.t1.exon8;Parent=MS.gene92186.t1
chr2.4 CDS 27346126 27346188 27346126 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27345522 27345587 27345522 ID=MS.gene92186.t1.exon9;Parent=MS.gene92186.t1
chr2.4 CDS 27345522 27345587 27345522 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
chr2.4 exon 27344583 27344631 27344583 ID=MS.gene92186.t1.exon10;Parent=MS.gene92186.t1
chr2.4 CDS 27344583 27344631 27344583 ID=cds.MS.gene92186.t1;Parent=MS.gene92186.t1
Gene Sequence

>MS.gene92186

ATGGGAGATAGTCAATACTCGTTTTCTCTTACAACTTTTAGTCCTTCTGGTAAGCTTGTTCAGATTGAACATGCTTTAACTGCTGTTGGTTCTGGACAAACTTCTCTCGGTATCAAAGGTATTTCTTTCATTCATTCGATTCGATCTGCTTCCAACCCTTTTTTCCTCATGTTTTAGGGTTCTTATTTTCAATTGCTTTTATTTCAATGTATTAGTTTAAGGTACATAAAATATGGGATAAAACAGCAAATATGTACTTGAGTCATTTAGATGTTGAAACAAATCCACAAATCAAATCGGTGGACTTGATTTCGGTACTGTTTGTTCTTGTATTCTTTTTCCGAGTTCACTTTATCTCGGTACTAGCTTTTTCCTTATTAGAAGCATGGGCAGGGTTTTAACTTCTGTCCCTCCCAGTGGTAGATTGAACTTGTATGATTGTCGTCTGATGGATAGGCAGAATGAATGTTGATTTCTTATTTATTGTGTAACTGTTCTTTATGAAGCCTTGTGAGTTTATTTGGGCATGGTGTGCAGGATAAGTTATGTTGGGAGGCTAGAGTTGAAATTTATTTAGTTTGCGATTACATTTATTTTATGCTTCAGTACTATCATAATGGTATAACTTGTTCATATTGCACATAGGAGGTCCATTTATTTGCAAATATCCTCTATTATTTCTGCAATTTGTACTATCTTTTCTAACTTTGATTTTGTGTGGATGATTTCTTTTTTGTAATATTAGCTGCAACATGTGTTTGTTTGTAACTATATATATATTTGGTTTTTTTGTAACTATATTTTTGGTTCTTGCAGCTGCAAATGGAGTTGTCATTGCCACAGAGAAGAAACTGCCATCTATATTGGTTGATGAAGCATCAGTAAGTTGTTTTTTCTTTGGATCAATTTTTGTACATTATTATTAGTGAAATATAAATCTGAAATTGCCCACTTCAAGATTGTATCCAATTTGGCTGTGCTATCGTTTTCTGCATCCCCTTTAAATTACTCAGCATCCTTATCTAATTTTTGTTTATTCTGGTTTATCTAATAATCCTTCTCGGCTTAGTATTTGAGAAGTATTTGCAAAGTAGAAAATGTTCTTATATCGTGATAGTTGAGGATACTTGAAAGTATGGCCAATTGGCCATTGATAGAACAAAATTTTATCTAGTTTCCGCAAGTTGTTTGTGGACTTTCTTTTATAAACGAGCTATGTAATATTTAGTTCACTTGATTAATTCAAGATTTCATACATTCTGGAGTTTTTACTCTTTGTTCATATGACTGCAGGTCCAAAAAATTCAGTTATTAACACCAAATATAGGTGTTGTATACAGGTTTGTTTCTTCTTACATGTTTCAATCACTTTAAGTTCAAACATGTTTGTATGGCATTATTATTTCTTTGTACAGTGATATTTGCTTCATATTATGGCAGTTGATGGTTGAGTTTTGAATATGTTCTTAAACACGAGGTGCTATTGAAGTTTCTGTTAGGAACCCAGACAAAATGAAATGAAAGAAAACTAGAAAGAATGAAAATCATAGAAGTGTATTATTGAAAACTAAACACATAGCTGAATTATATCCAAGGGTTTTCCCTTCACAAAAGGTCCCTCCTTTCGTTTACAAACCCTCTGAAGTACTTGATGAATCATCCAAACTGATTCCCCCTATTTATCTAACCCATCACCTTCTAATCCCTTCCAACTGCCTATCCCTGAGTAACTCCTTGAAACAGTTTTCACAGAATAAACAACTGATGAATCTTGAAAGCTATTTTCAATGTTTTTCTATATTTTCATTTTAACTCCTTGTAAGAGATAAACTATTGAAAGAACATGTTTTCTGATGTTTATTGTGTGTGAAGCTTCATTTAATGTCTATTAGCCTACTTTTTTCCATTGCTGTTGAGCTTTTGGTATATGACAGTGGTTATTTTTGCTTAGATTATTTTCAAATATTGTATTTATTGATATCAATTTTGTTTTTGTTCAGTGGCATGGGTCCTGATTTCCGAGTTTTGGTTCGAAAAAGCAGGAAACAGGCTGAGCAGTATCACCGATTGTATAAGGTACACCATACTATGTATTGCAATATTCTTTCTTCCTGTTCTGCCTATATTTGGTCTATATGATTCAGTTACAATGTTGTAACCTGTACTTCGGAATTTGATATTGGAATGGATTTTATCGTTTAAATTTTACTTGGTAACATCTACATATGTAGTCTGCCTATTCCTTTATTTCCTATTGCTTGTAATGAGTTAGGACACTGTTGCTTGTTATACATCAATTACATGTTCCTTAAATAATTTCTTTTTCCTTTTCTGGATAGTGCCGTTTACTTTTTATTTGTGTTTGTTGAAAAATACACAGTTTATGCTACTGATAATGTTGATCTTTATGAATATGCATTTTCTAGTCCAGTTGTCTTTTCTGTTATCTTTTGGTTTTCTATTATGGATCTTTTGTTAAAAATAGACTGTCTGATACTGTAAGTGAAAATTGCAGGAACCAATCCCTGTCACTCAACTTGTGAGGGAAGTTGCTGCTGTCATGCAGGAATTTACTCAGTCTGGGTAATTATTAATTCTTCAGTGTCTTTGCTTTCAGAAATTTTCACATCTGAACTTTACCATATCTACTCCCAGCATATAAGTTTATGTTATGTACATATGTCATCCCTCCCATCACAAAAAATAAAATAAAAAACTAAGATAGAGAGAGAAATAACGTGTAATCCAGGTAAAGTTGGTGTTTTATCCTCATCAACTTTGAGTTTTTGGTAAATTTCACAACTTATAAGAAAATAAAATTGTCAAAAGCATTTACTCCAATCAATATGAAGTACCCATTTTGATGCTTTTCAAAGTTGATGGATATTAATTGTTATAATCAAATTAAATGTCGAGAAATCGTTTCACAAACCTCGATTATCATCATATGTTAAGGGAAGTTTGAAATGAGTTTAAAAGGTGTCTGACTCTGAAACTTTGTACATTTTCCTTTCTGAAAGAACGTGTATTTGGGGATCTATTAACAGCAGCATTAGTTAATTTTTATGCAACTGTTGGGAACTCACTGTTTAGATAAACATTTTGTTCCTATTGGAATTCCATAATGAACCCCTAAATATAAAATGCAACGAACTTAGTTGGATCCTCCGACTCTTTTTTATACACACAATTGTCTTTTTCTTTCCATTTCTCCCCTTTATTATCATTTGAATATTAATTTTTCTTTTTTTGCCCTGATAGTGGTGTTAGGCCATTTGGAGTGTCCCTGCTTGTTGCTGGGTTTGATGATAATGGACCACAACTATATCAGGTATGGCATATGGTGTACTTTGTAATTTGTATTGTGTTTGATTAGTTTGCACTGGAATTTTTTTCTTCTTGCTCTAGAATTGTTTAAAGTTACTGTACTTTTAAGGGAAAGAGAAGGGAAAATTGAAGGTTGTTTTTGCTGTAGGTGGATCCATCAGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGGAAAAATGTTTCTAATGCTAAGACATTTCTTGAGAAGAGGTATGCTTTCACATTAATGATGGCAATGTTTTAGGCAAATATGCGGAGTCTATCAATGTATAATGTCTATGTCTGCTGTGTCCATTATTAGAGATTAATGTAATGATATGTTTCTGTTTGATGTTAGTATCGTTCAGTACAGATAAACCTCGACATCTCTATCAATTCATGTTTTTTCCTTGATTGTCCAATTGTAGATACACTGATGATATGGAGCTTGATGATGCAGTCCACACAGCCATATTGACACTGAAGGAAGGGTAGGAAAATGCCGTGTAACGTTTATGCATTAAAAAACCTTAATGAAAATATCATATTTAATTCTTAGAGTTGATTAGGTCGCAAAAAACCAGTTTTTGTGTGTTTATTTCTCCGTTTAAGCAAAATGTTTCTTCCTGTCAGTTAGTGTATGATAAATTCCATGTTTCAGAATTATAAAATGGAGAATGAAAATGCACCTAAGATTGGCTTCTTGGTTCAACTGAAAAATATTGAGGCTATTCTTATCTAGTGTATCAAAGAAATTTCTTATTAGTGATCTTGGCATATACCAAAGGCCCATCCCTGTAAAATCATCATGAGCTGCCTTTATGTTAGCAAGGCTCCAAGCTTGTTGGATTAGGAACTTGAAAATGACAGCGAGTGATTACTGTTCTTGTTTCCCTTCATTGCCATTTTTTATGTTGTTTGTTTCCTCTTTCTTTTTAATTCTTTTCTGCTATACCAAAAGAAAAAAAAAAAAAAATATCCGGCCTTTGTTAGTCTTTGAAACTAATCCCTTTTGTTGGCATTTCCCAGGTTTGAGGGACAGATCTCAGCAAAAAACATTGAAATCGGCATCATTGGTGCAGACAAAAAGTTCAGGTGCATATCTTTGTTCCCTAAAATATACTTTGGCTGACTTTTCTGTCATGTTTTTCCCCCTTTTCAGTATTTGTTTATTTGAACTTTGTATCATCTGGTTTCTTTTACCGATCAAATTGAGCTAAAAATTATGCTATGGGTTATCCAATCTGAATAATTAAAAGGTATAAATTTGAGGCATATGGGTTAGGACTGCGAAATGGAATTTAGTCACTGAAATGAATATTATGGTGTGTTTGTTATACATTTGCACCATGGTCAAAAAGCTTAGATCAAGTCCTTTGGGTGTTGTTTGGTTTTGTTATTAGTTTAGTTTTGAAATGTTTAAAAACCAACACCATGTCCAATTTTGTGGTTTTCACTTTCAATAATTGCTGTGAAGTTATAAATTCTTGGACCCCGTTGCCCGACAGTCTCTATTATGTTGTCACCTAGTACTCCTCCACTCGCACTAAACACCCTCCACTTTAAGTTTGTAACCATGTTGCATGCTCCATTCCCGTCTACGTGTGGTATCCTCCATTGTTGTCAAATACCCCTCCATCTTGTATCTTGTCATCATGTTTTGAAATCAATGACATGTATATATTATTTTTTTCCTTTAAATTATGCAACATATATTTTTAATGGAGGCTAATTAAAATCAGGAAAGATATTCACATATTTACATTGTTCGACAAACTGGATCCCAAAAATATTAAGACTCTGATATGAGTTTTTTGTTTTACCAATGCAAATGGATAACTTCCCAATGCATTTTGTGAGTAGCAAGTTTTTTTTCTTATTTTTTGCTGGTGGGGTGGCATTGGGGCATAAAACGACCAGTAAGCTCAAGTTTTTGTTTTGAATACCTGATTTGGTAACTTAATAGTTTGTTAATTATATTGCAGGGTATTGACACCAGCTGAAATTGATGATTATTTGGGTGAAGTAGAATAA

Protein sequence

>MS.gene92186.t1

MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDEASVQKIQLLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYHRLYKEPIPVTQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISAKNIEIGIIGADKKFRVLTPAEIDDYLGEVE