Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56763.t1 | XP_003588461.2 | 88.5 | 390 | 38 | 3 | 3 | 386 | 4 | 392 | 1.70E-182 | 648.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56763.t1 | Q1H5E9 | 75.8 | 343 | 73 | 2 | 53 | 385 | 55 | 397 | 1.3e-138 | 494.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56763.t1 | G7I294 | 88.5 | 390 | 38 | 3 | 3 | 386 | 4 | 392 | 1.3e-182 | 648.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050529 | MS.gene56763 | 0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene56763 | 0.800826 | 1.20E-48 | -1.69E-46 |
| MS.gene053330 | MS.gene56763 | 0.811947 | 5.43E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene56763 | 0.820433 | 6.88E-53 | -1.69E-46 |
| MS.gene055370 | MS.gene56763 | 0.846522 | 2.06E-59 | -1.69E-46 |
| MS.gene056633 | MS.gene56763 | 0.821302 | 4.34E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene56763 | 0.80195 | 7.07E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene56763 | 0.842137 | 3.11E-58 | -1.69E-46 |
| MS.gene058746 | MS.gene56763 | 0.823287 | 1.50E-53 | -1.69E-46 |
| MS.gene059492 | MS.gene56763 | 0.844079 | 9.44E-59 | -1.69E-46 |
| MS.gene059494 | MS.gene56763 | 0.894227 | 3.01E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56763.t1 | MTR_1g007490 | 91.538 | 390 | 26 | 3 | 3 | 386 | 4 | 392 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56763.t1 | AT5G48470 | 70.712 | 379 | 95 | 5 | 19 | 385 | 23 | 397 | 0.0 | 521 |
Find 0 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGCATAAAATTAGAAAT+AGG | + | 10790:12237-12256 | None:intergenic | 15.0% |
| !! | AATCTATTACAATCTACATT+TGG | - | 10790:10384-10403 | MS.gene56763:intron | 20.0% |
| !! | AATTTATTCATGTAACATAG+TGG | + | 10790:10107-10126 | None:intergenic | 20.0% |
| !! | AGATTGTAATAGATTATAGT+TGG | + | 10790:10379-10398 | None:intergenic | 20.0% |
| !! | ATATTTATCACTCAATTGAA+AGG | + | 10790:11118-11137 | None:intergenic | 20.0% |
| !! | ATTAAACAATTTAACCAAAC+AGG | - | 10790:9901-9920 | MS.gene56763:intron | 20.0% |
| !! | CCATATAATTGTAAAATACT+TGG | - | 10790:11902-11921 | MS.gene56763:CDS | 20.0% |
| !! | GTTATCAAAATAAAACAGTT+TGG | + | 10790:11958-11977 | None:intergenic | 20.0% |
| !! | TATACTTGAAAACAACTTTA+TGG | + | 10790:9773-9792 | None:intergenic | 20.0% |
| !! | TTAAATGTAACATCTTTCTA+AGG | + | 10790:9935-9954 | None:intergenic | 20.0% |
| !!! | AAAAATAGAAAAGTATCAAC+TGG | + | 10790:12072-12091 | None:intergenic | 20.0% |
| !!! | AGTAAGTTTGGAATATTTTT+AGG | + | 10790:9476-9495 | None:intergenic | 20.0% |
| !!! | CCAAGTATTTTACAATTATA+TGG | + | 10790:11905-11924 | None:intergenic | 20.0% |
| !!! | TGTGTAGATTTAAAACTAAA+TGG | - | 10790:11445-11464 | MS.gene56763:intron | 20.0% |
| ! | AATAGAAACATTTGTGGATT+TGG | + | 10790:12180-12199 | None:intergenic | 25.0% |
| ! | ACCATTCATCATAAAAACTA+TGG | + | 10790:11854-11873 | None:intergenic | 25.0% |
| ! | AGTTGAAAATTTCACTCTAT+TGG | - | 10790:11928-11947 | MS.gene56763:CDS | 25.0% |
| ! | ATATATCAAGAACTGAGTAT+GGG | + | 10790:11986-12005 | None:intergenic | 25.0% |
| ! | GATTAATTGTTTACAGACAA+TGG | - | 10790:11191-11210 | MS.gene56763:intron | 25.0% |
| ! | GTTGAAAATTTCACTCTATT+GGG | - | 10790:11929-11948 | MS.gene56763:CDS | 25.0% |
| ! | TACAATTATATGGAATTCTC+AGG | + | 10790:11895-11914 | None:intergenic | 25.0% |
| ! | TAGAAATAGGTATTTATGAC+AGG | + | 10790:12224-12243 | None:intergenic | 25.0% |
| ! | TATATATCAAGAACTGAGTA+TGG | + | 10790:11987-12006 | None:intergenic | 25.0% |
| ! | TCAACTTTAAATGCTGAAAT+TGG | + | 10790:9511-9530 | None:intergenic | 25.0% |
| ! | TGTATGATAGAGTAATAATC+AGG | + | 10790:12011-12030 | None:intergenic | 25.0% |
| ! | TTAAACAACTGTATGAATGA+AGG | + | 10790:10889-10908 | None:intergenic | 25.0% |
| ! | TTCGAATGAAAAACAAAGTT+TGG | - | 10790:12513-12532 | MS.gene56763:CDS | 25.0% |
| ! | TTGAAAATTTCACTCTATTG+GGG | - | 10790:11930-11949 | MS.gene56763:CDS | 25.0% |
| ! | TTTGGAAATAGAAACATTTG+TGG | + | 10790:12186-12205 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGGTTCAAGTAAT+TGG | - | 10790:10666-10685 | MS.gene56763:intron | 25.0% |
| !!! | ATTTTGTCGTTTGTGTTAAA+AGG | - | 10790:11400-11419 | MS.gene56763:CDS | 25.0% |
| !!! | ATTTTTAGGATAAGTTTGTG+TGG | + | 10790:9462-9481 | None:intergenic | 25.0% |
| !!! | TGGCTTGTTACTTTATAATA+TGG | + | 10790:12557-12576 | None:intergenic | 25.0% |
| !!! | TTTTGTCGTTTGTGTTAAAA+GGG | - | 10790:11401-11420 | MS.gene56763:CDS | 25.0% |
| !!! | TTTTTAGGATAAGTTTGTGT+GGG | + | 10790:9461-9480 | None:intergenic | 25.0% |
| AAGGATAGAAAAAGTTAACC+AGG | + | 10790:11099-11118 | None:intergenic | 30.0% | |
| ACCGATATTTAATTAGCTCA+CGG | - | 10790:12310-12329 | MS.gene56763:intron | 30.0% | |
| ACTTGAACCTAAAAGATGAA+GGG | + | 10790:10663-10682 | None:intergenic | 30.0% | |
| AGTGGATCATGATGATTTAA+TGG | + | 10790:12577-12596 | None:intergenic | 30.0% | |
| ATATTTAATTAGCTCACGGA+AGG | - | 10790:12314-12333 | MS.gene56763:intron | 30.0% | |
| ATCGAAATATATGCACAGTT+AGG | + | 10790:10485-10504 | None:intergenic | 30.0% | |
| ATGATAAGAAATGTGATGCT+CGG | - | 10790:11577-11596 | MS.gene56763:CDS | 30.0% | |
| ATGTCCTTAACCTTATCAAT+TGG | - | 10790:9960-9979 | MS.gene56763:CDS | 30.0% | |
| ATTATTAAGCTTGGTCTGTT+AGG | + | 10790:10439-10458 | None:intergenic | 30.0% | |
| GAACTTCTTAACTAAATTGG+TGG | - | 10790:11525-11544 | MS.gene56763:intron | 30.0% | |
| GGTAATCATTTCTTGAAGAA+CGG | + | 10790:9705-9724 | None:intergenic | 30.0% | |
| GGTGAACTTCTTAACTAAAT+TGG | - | 10790:11522-11541 | MS.gene56763:intron | 30.0% | |
| GTCGCAAAAAAATATGCTTT+CGG | - | 10790:11474-11493 | MS.gene56763:intron | 30.0% | |
| GTTGAACTTGAATTTCAATG+TGG | - | 10790:10067-10086 | MS.gene56763:intron | 30.0% | |
| TACTTGAACCTAAAAGATGA+AGG | + | 10790:10664-10683 | None:intergenic | 30.0% | |
| TCCGTGAGCTAATTAAATAT+CGG | + | 10790:12314-12333 | None:intergenic | 30.0% | |
| TGAGTGCAATTTAGTAAGTT+TGG | + | 10790:9488-9507 | None:intergenic | 30.0% | |
| TGGTATACAACATTACAACT+TGG | + | 10790:10628-10647 | None:intergenic | 30.0% | |
| TGTCCTTAACCTTATCAATT+GGG | - | 10790:9961-9980 | MS.gene56763:CDS | 30.0% | |
| TTAAAAATCATAAGAGACGC+AGG | + | 10790:12438-12457 | None:intergenic | 30.0% | |
| TTATTAAGCTTGGTCTGTTA+GGG | + | 10790:10438-10457 | None:intergenic | 30.0% | |
| ! | AACAGTGTTTAAAATTCACG+TGG | + | 10790:11170-11189 | None:intergenic | 30.0% |
| ! | AGGTTGTATGCACATTATTT+TGG | + | 10790:12204-12223 | None:intergenic | 30.0% |
| ! | GCCATAGTTTTTATGATGAA+TGG | - | 10790:11850-11869 | MS.gene56763:CDS | 30.0% |
| ! | TAACATCTTTCTAAGGAGTA+GGG | + | 10790:9928-9947 | None:intergenic | 30.0% |
| ! | TCATATCTGCTTTCCTTTTT+GGG | + | 10790:10708-10727 | None:intergenic | 30.0% |
| ! | TGCACTCTGACTTTATATTT+TGG | + | 10790:9988-10007 | None:intergenic | 30.0% |
| ! | TTCATATCTGCTTTCCTTTT+TGG | + | 10790:10709-10728 | None:intergenic | 30.0% |
| !! | AAATTTGTTATTGCTTCAGC+TGG | - | 10790:10122-10141 | MS.gene56763:intron | 30.0% |
| !! | TATTTTGGACCCAATTGATA+AGG | + | 10790:9973-9992 | None:intergenic | 30.0% |
| !!! | CCTGATATGTTGATTTTGAT+CGG | - | 10790:10019-10038 | MS.gene56763:intron | 30.0% |
| !!! | GATACTTTTCTATTTTTGCC+AGG | - | 10790:12075-12094 | MS.gene56763:intron | 30.0% |
| AAAAGACAGAAGTCATTCAG+TGG | + | 10790:12595-12614 | None:intergenic | 35.0% | |
| AAATGAAAACTCAGAAGAGG+AGG | - | 10790:9628-9647 | MS.gene56763:intron | 35.0% | |
| AAGGTCGATCATGTAATCAA+GGG | + | 10790:10253-10272 | None:intergenic | 35.0% | |
| ACCCTTGTAAGTTCTTTCTT+AGG | - | 10790:9722-9741 | MS.gene56763:intron | 35.0% | |
| ACTTCTATCAAGTTCTGTAG+AGG | - | 10790:10932-10951 | MS.gene56763:intron | 35.0% | |
| ACTTGAAGATTCATATCCCA+GGG | - | 10790:10778-10797 | MS.gene56763:CDS | 35.0% | |
| AGCCTAAGAAAGAACTTACA+AGG | + | 10790:9727-9746 | None:intergenic | 35.0% | |
| AGTTAAATGCTATCTCCTGA+AGG | + | 10790:12662-12681 | None:intergenic | 35.0% | |
| ATATATGCTGGATCTGACAA+TGG | - | 10790:12109-12128 | MS.gene56763:intron | 35.0% | |
| CCGATCAAAATCAACATATC+AGG | + | 10790:10022-10041 | None:intergenic | 35.0% | |
| CTATATCTGAATTCTTGCCA+AGG | - | 10790:11141-11160 | MS.gene56763:intron | 35.0% | |
| CTTAAAGAAGTTCCTTACCT+GGG | + | 10790:10576-10595 | None:intergenic | 35.0% | |
| GAAGCAGAAGAATCGATTAT+TGG | - | 10790:9529-9548 | MS.gene56763:intron | 35.0% | |
| GAATTTACACCTTATCATCC+TGG | + | 10790:10287-10306 | None:intergenic | 35.0% | |
| GAGGTAGAGTATATAATCCA+CGG | + | 10790:11323-11342 | None:intergenic | 35.0% | |
| GCCTAAGAAAGAACTTACAA+GGG | + | 10790:9726-9745 | None:intergenic | 35.0% | |
| TAAAATTCACGTGGTTTCCT+TGG | + | 10790:11161-11180 | None:intergenic | 35.0% | |
| TAGAGGTTCTCAATATTGGA+GGG | - | 10790:10949-10968 | MS.gene56763:intron | 35.0% | |
| TCGTTTGTGTTAAAAGGGAT+TGG | - | 10790:11406-11425 | MS.gene56763:CDS | 35.0% | |
| TCTAAATGACATAGCTAACC+AGG | - | 10790:10806-10825 | MS.gene56763:CDS | 35.0% | |
| TCTATGTAGAACTCCCAAAA+AGG | - | 10790:10692-10711 | MS.gene56763:intron | 35.0% | |
| TCTGTAGAGGTTCTCAATAT+TGG | - | 10790:10945-10964 | MS.gene56763:intron | 35.0% | |
| TGAGTTGCGATTATTAAGCT+TGG | + | 10790:10448-10467 | None:intergenic | 35.0% | |
| TGGATTATATACTCTACCTC+CGG | - | 10790:11323-11342 | MS.gene56763:CDS | 35.0% | |
| TTAAAGAAGTTCCTTACCTG+GGG | + | 10790:10575-10594 | None:intergenic | 35.0% | |
| TTCGGCATCATTAAAACTGT+TGG | - | 10790:11492-11511 | MS.gene56763:intron | 35.0% | |
| ! | ATTTTCCTCTAGGTACAAGT+TGG | + | 10790:12479-12498 | None:intergenic | 35.0% |
| ! | CCTCTTCTGAGTTTTCATTT+CGG | + | 10790:9628-9647 | None:intergenic | 35.0% |
| ! | GTAACATCTTTCTAAGGAGT+AGG | + | 10790:9929-9948 | None:intergenic | 35.0% |
| ! | TCAAAACTGCATTTTCCTCT+AGG | + | 10790:12489-12508 | None:intergenic | 35.0% |
| !! | TCAGAAAAGTGTTTGAGAAG+TGG | + | 10790:10599-10618 | None:intergenic | 35.0% |
| AAAGACACTTCAAGTCCTTC+AGG | - | 10790:12644-12663 | MS.gene56763:CDS | 40.0% | |
| ACACTCCATTCCATTTGGAA+AGG | - | 10790:10350-10369 | MS.gene56763:intron | 40.0% | |
| ACTTGTCTGTCATGATATCC+AGG | - | 10790:11752-11771 | MS.gene56763:intron | 40.0% | |
| AGAATCTGAGAAAGTAGCAG+TGG | - | 10790:10164-10183 | MS.gene56763:intron | 40.0% | |
| AGCGATACAAGTTACGAAGT+TGG | - | 10790:9572-9591 | MS.gene56763:intron | 40.0% | |
| ATCAAGGGCCATCATGAAAT+CGG | + | 10790:10238-10257 | None:intergenic | 40.0% | |
| ATTAAAACTGTTGGCAGTGC+AGG | - | 10790:11501-11520 | MS.gene56763:intron | 40.0% | |
| ATTGCTTCAGCTGGAAGATA+TGG | - | 10790:10131-10150 | MS.gene56763:intron | 40.0% | |
| CAAAACCAACTTGTACCTAG+AGG | - | 10790:12471-12490 | MS.gene56763:CDS | 40.0% | |
| CAACGTGATGCACTTCTTAA+AGG | - | 10790:9662-9681 | MS.gene56763:intron | 40.0% | |
| CAAGGTCGATCATGTAATCA+AGG | + | 10790:10254-10273 | None:intergenic | 40.0% | |
| CATATATACCAGACAAGACC+TGG | + | 10790:12096-12115 | None:intergenic | 40.0% | |
| CCAGGCTGATGATTTATTAG+AGG | - | 10790:10824-10843 | MS.gene56763:CDS | 40.0% | |
| CCGAAATGAAAACTCAGAAG+AGG | - | 10790:9625-9644 | MS.gene56763:intron | 40.0% | |
| CCTCTAATAAATCATCAGCC+TGG | + | 10790:10827-10846 | None:intergenic | 40.0% | |
| CGGTTAAGAAGTTCGTTAAG+TGG | + | 10790:9608-9627 | None:intergenic | 40.0% | |
| CTTGAAGATTCATATCCCAG+GGG | - | 10790:10779-10798 | MS.gene56763:CDS | 40.0% | |
| GACTTGAAGATTCATATCCC+AGG | - | 10790:10777-10796 | MS.gene56763:CDS | 40.0% | |
| GATACAAGTTACGAAGTTGG+TGG | - | 10790:9575-9594 | MS.gene56763:intron | 40.0% | |
| GATATTGCACTTGAAAGACG+CGG | + | 10790:11036-11055 | None:intergenic | 40.0% | |
| GATGGAATCCGATTTCATGA+TGG | - | 10790:10227-10246 | MS.gene56763:intron | 40.0% | |
| GCTTAAAGAAGTTCCTTACC+TGG | + | 10790:10577-10596 | None:intergenic | 40.0% | |
| GGACCCAATTGATAAGGTTA+AGG | + | 10790:9967-9986 | None:intergenic | 40.0% | |
| GTAGAGGTTCTCAATATTGG+AGG | - | 10790:10948-10967 | MS.gene56763:intron | 40.0% | |
| GTCTTGTCTGGTATATATGC+TGG | - | 10790:12097-12116 | MS.gene56763:intron | 40.0% | |
| GTTTCTCGAAACAGTCTCTA+AGG | - | 10790:11818-11837 | MS.gene56763:CDS | 40.0% | |
| TAGTTGGAGACCTTTCCAAA+TGG | + | 10790:10363-10382 | None:intergenic | 40.0% | |
| TCAGCTGGAAGATATGGATA+TGG | - | 10790:10137-10156 | MS.gene56763:intron | 40.0% | |
| TGAACCTAAAAGATGAAGGG+AGG | + | 10790:10660-10679 | None:intergenic | 40.0% | |
| TTGGATGAAAGAAATGACCG+TGG | - | 10790:11303-11322 | MS.gene56763:CDS | 40.0% | |
| TTTCCAAATGGAATGGAGTG+TGG | + | 10790:10351-10370 | None:intergenic | 40.0% | |
| TTTGATGAACCTGCAAGCAA+AGG | + | 10790:12626-12645 | None:intergenic | 40.0% | |
| ! | AAATTGGTGGCCTTAAAACC+TGG | - | 10790:11538-11557 | MS.gene56763:CDS | 40.0% |
| ! | AACTCCTCCCTTCATCTTTT+AGG | - | 10790:10653-10672 | MS.gene56763:intron | 40.0% |
| ! | AATTGGTGGCCTTAAAACCT+GGG | - | 10790:11539-11558 | MS.gene56763:CDS | 40.0% |
| ! | ATGTCATTTAGATTTGCCCC+TGG | + | 10790:10798-10817 | None:intergenic | 40.0% |
| ! | CACAACTTTCCCAGGTTTTA+AGG | + | 10790:11551-11570 | None:intergenic | 40.0% |
| ! | TGGTAAGAGAGTTGATCAGA+TGG | - | 10790:10209-10228 | MS.gene56763:intron | 40.0% |
| ! | TGTCATTTAGATTTGCCCCT+GGG | + | 10790:10797-10816 | None:intergenic | 40.0% |
| !! | CAGAAGCTTTCTAAAATGCC+TGG | - | 10790:11078-11097 | MS.gene56763:intron | 40.0% |
| !! | CAGGCATTTTAGAAAGCTTC+TGG | + | 10790:11080-11099 | None:intergenic | 40.0% |
| !! | TATTTTTGCCAGGTCTTGTC+TGG | - | 10790:12085-12104 | MS.gene56763:intron | 40.0% |
| !! | TTCAGTAGGATTTGCTGGAA+GGG | - | 10790:11648-11667 | MS.gene56763:intron | 40.0% |
| !! | TTTCAGTAGGATTTGCTGGA+AGG | - | 10790:11647-11666 | MS.gene56763:intron | 40.0% |
| !!! | CTCTAGGTACAAGTTGGTTT+TGG | + | 10790:12473-12492 | None:intergenic | 40.0% |
| !!! | TAGGTACAAGTTGGTTTTGG+TGG | + | 10790:12470-12489 | None:intergenic | 40.0% |
| AAAACCTGGGAAAGTTGTGC+TGG | - | 10790:11552-11571 | MS.gene56763:CDS | 45.0% | |
| AACTAAAAAATGCCCACCCC+AGG | - | 10790:10556-10575 | MS.gene56763:CDS | 45.0% | |
| ACTGTTTCGAGAAACATGCC+CGG | + | 10790:11813-11832 | None:intergenic | 45.0% | |
| AGAAGAAGCCCGTGATATGA+TGG | - | 10790:11269-11288 | MS.gene56763:CDS | 45.0% | |
| AGGGTTTCAGTAGGATTTGC+TGG | - | 10790:11643-11662 | MS.gene56763:intron | 45.0% | |
| ATATCCAGCACAACTTTCCC+AGG | + | 10790:11559-11578 | None:intergenic | 45.0% | |
| ATGAAGGGAGGAGTTCACAT+TGG | + | 10790:10648-10667 | None:intergenic | 45.0% | |
| CAGATCGAAAACTGCTTGCA+AGG | - | 10790:11232-11251 | MS.gene56763:intron | 45.0% | |
| CATCCACACTCCATTCCATT+TGG | - | 10790:10345-10364 | MS.gene56763:intron | 45.0% | |
| CGTGATGCACTTCTTAAAGG+TGG | - | 10790:9665-9684 | MS.gene56763:intron | 45.0% | |
| GAAGAAGCCCGTGATATGAT+GGG | - | 10790:11270-11289 | MS.gene56763:CDS | 45.0% | |
| GATGATGACAGGGTTTCAGT+AGG | - | 10790:11634-11653 | MS.gene56763:intron | 45.0% | |
| GGAGACCTTTCCAAATGGAA+TGG | + | 10790:10358-10377 | None:intergenic | 45.0% | |
| GTGATGCTCGGAAAAGATGA+AGG | - | 10790:11589-11608 | MS.gene56763:intron | 45.0% | |
| TCACATCAACATACCTCAGC+CGG | + | 10790:11345-11364 | None:intergenic | 45.0% | |
| TCACTGCACAACATCTGGAA+TGG | - | 10790:12134-12153 | MS.gene56763:intron | 45.0% | |
| TGAACCTGCAAGCAAAGGAA+AGG | + | 10790:12621-12640 | None:intergenic | 45.0% | |
| TGAGAAAGTAGCAGTGGAGT+TGG | - | 10790:10170-10189 | MS.gene56763:intron | 45.0% | |
| TGAGAAGGACCAGGATGATA+AGG | - | 10790:10275-10294 | MS.gene56763:CDS | 45.0% | |
| TGGTATCACTGCACAACATC+TGG | - | 10790:12129-12148 | MS.gene56763:intron | 45.0% | |
| TGTTCCTTTCCTTTGCTTGC+AGG | - | 10790:12614-12633 | MS.gene56763:CDS | 45.0% | |
| TTAGCTCACGGAAGGTAACT+AGG | - | 10790:12322-12341 | MS.gene56763:intron | 45.0% | |
| TTGGCTGCACAAGGAGTTAT+TGG | - | 10790:10189-10208 | MS.gene56763:intron | 45.0% | |
| ! | AGTTTTCGATCTGGCACAAC+AGG | + | 10790:11225-11244 | None:intergenic | 45.0% |
| ! | CACTGCACAACATCTGGAAT+GGG | - | 10790:12135-12154 | MS.gene56763:intron | 45.0% |
| ! | CTTGCAAGCAGTTTTCGATC+TGG | + | 10790:11234-11253 | None:intergenic | 45.0% |
| ! | TCAACTGGAAGTGCAAACAC+AGG | + | 10790:12057-12076 | None:intergenic | 45.0% |
| ! | TGGCAACGATGATGATGACA+GGG | - | 10790:11624-11643 | MS.gene56763:intron | 45.0% |
| !! | ACAAGTTACGAAGTTGGTGG+TGG | - | 10790:9578-9597 | MS.gene56763:intron | 45.0% |
| !! | GCTGGTGGCGGTTTATTTAA+AGG | - | 10790:10747-10766 | MS.gene56763:intron | 45.0% |
| AAAAATGCCCACCCCAGGTA+AGG | - | 10790:10561-10580 | MS.gene56763:CDS | 50.0% | |
| AAGAAGTTCCTTACCTGGGG+TGG | + | 10790:10572-10591 | None:intergenic | 50.0% | |
| AAGTCAGAGTGCAAGTCGTC+AGG | - | 10790:9995-10014 | MS.gene56763:CDS | 50.0% | |
| AGAAGTTCCTTACCTGGGGT+GGG | + | 10790:10571-10590 | None:intergenic | 50.0% | |
| AGTGCAAACACAGGCAGAGA+AGG | + | 10790:12048-12067 | None:intergenic | 50.0% | |
| ATATACTCTACCTCCGGCTG+AGG | - | 10790:11329-11348 | MS.gene56763:CDS | 50.0% | |
| ATCGCAACTCACACACATGC+TGG | - | 10790:10457-10476 | MS.gene56763:CDS | 50.0% | |
| CATGATCGACCTTGCTGAGA+AGG | - | 10790:10260-10279 | MS.gene56763:intron | 50.0% | |
| CTAAGGAGTAGGGTCCTGTT+TGG | + | 10790:9918-9937 | None:intergenic | 50.0% | |
| CTGTTTCGAGAAACATGCCC+GGG | + | 10790:11812-11831 | None:intergenic | 50.0% | |
| GATATCCAGGCAAGTGTGAC+AGG | - | 10790:11765-11784 | MS.gene56763:intron | 50.0% | |
| GTGAGTCGAATTGGATGACG+TGG | - | 10790:11670-11689 | MS.gene56763:intron | 50.0% | |
| TCGCAACTCACACACATGCT+GGG | - | 10790:10458-10477 | MS.gene56763:CDS | 50.0% | |
| ! | AAGCCCGTGATATGATGGGA+GGG | - | 10790:11274-11293 | MS.gene56763:CDS | 50.0% |
| ! | CTGGCAACGATGATGATGAC+AGG | - | 10790:11623-11642 | MS.gene56763:intron | 50.0% |
| ! | GATGAAGGTGCAGACAACAC+TGG | - | 10790:11604-11623 | MS.gene56763:intron | 50.0% |
| !! | TATGATGGGAGGGGGGATTT+TGG | - | 10790:11284-11303 | MS.gene56763:CDS | 50.0% |
| !!! | AGTTGGTTTTGGTGGCAACG+TGG | + | 10790:12462-12481 | None:intergenic | 50.0% |
| CATCAACATACCTCAGCCGG+AGG | + | 10790:11342-11361 | None:intergenic | 55.0% | |
| CATCCTGGTCCTTCTCAGCA+AGG | + | 10790:10272-10291 | None:intergenic | 55.0% | |
| GATGCAGCGCAAGTCACTGT+TGG | - | 10790:10502-10521 | MS.gene56763:CDS | 55.0% | |
| GCTGGAAGGGTGAGTCGAAT+TGG | - | 10790:11661-11680 | MS.gene56763:intron | 55.0% | |
| TCCAGGCAAGTGTGACAGGA+CGG | - | 10790:11769-11788 | MS.gene56763:intron | 55.0% | |
| TCCCCCCTCCCATCATATCA+CGG | + | 10790:11281-11300 | None:intergenic | 55.0% | |
| TTGTTACGCCGAGTTGCAGC+TGG | - | 10790:10729-10748 | MS.gene56763:intron | 55.0% | |
| ! | AGCCCGTGATATGATGGGAG+GGG | - | 10790:11275-11294 | MS.gene56763:CDS | 55.0% |
| ! | GAAGCCCGTGATATGATGGG+AGG | - | 10790:11273-11292 | MS.gene56763:CDS | 55.0% |
| AACCGCCACCAGCTGCAACT+CGG | + | 10790:10740-10759 | None:intergenic | 60.0% | |
| AGAAACATGCCCGGGCGTAC+GGG | + | 10790:11804-11823 | None:intergenic | 60.0% | |
| CCCCCCTCCCATCATATCAC+GGG | + | 10790:11280-11299 | None:intergenic | 60.0% | |
| CGACCTTGCTGAGAAGGACC+AGG | - | 10790:10266-10285 | MS.gene56763:intron | 60.0% | |
| GAGAAACATGCCCGGGCGTA+CGG | + | 10790:11805-11824 | None:intergenic | 60.0% | |
| GCAGTGGAGTTGGCTGCACA+AGG | - | 10790:10180-10199 | MS.gene56763:intron | 60.0% | |
| TCCGTCCTGTCACACTTGCC+TGG | + | 10790:11773-11792 | None:intergenic | 60.0% | |
| TTACGCCGAGTTGCAGCTGG+TGG | - | 10790:10732-10751 | MS.gene56763:intron | 60.0% | |
| ! | CCCGTGATATGATGGGAGGG+GGG | - | 10790:11277-11296 | MS.gene56763:CDS | 60.0% |
| ! | GCCCGTGATATGATGGGAGG+GGG | - | 10790:11276-11295 | MS.gene56763:CDS | 60.0% |
| AAGCCACATCCCGTACGCCC+GGG | - | 10790:11792-11811 | MS.gene56763:intron | 65.0% | |
| GAAGCCACATCCCGTACGCC+CGG | - | 10790:11791-11810 | MS.gene56763:intron | 65.0% | |
| ATGCCCGGGCGTACGGGATG+TGG | + | 10790:11798-11817 | None:intergenic | 70.0% | |
| CGCCGAGTTGCAGCTGGTGG+CGG | - | 10790:10735-10754 | MS.gene56763:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10790 | gene | 9428 | 12683 | 9428 | ID=MS.gene56763 |
| 10790 | mRNA | 9428 | 12683 | 9428 | ID=MS.gene56763.t1;Parent=MS.gene56763 |
| 10790 | exon | 12384 | 12683 | 12384 | ID=MS.gene56763.t1.exon1;Parent=MS.gene56763.t1 |
| 10790 | CDS | 12384 | 12683 | 12384 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 11815 | 11970 | 11815 | ID=MS.gene56763.t1.exon2;Parent=MS.gene56763.t1 |
| 10790 | CDS | 11815 | 11970 | 11815 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 11534 | 11602 | 11534 | ID=MS.gene56763.t1.exon3;Parent=MS.gene56763.t1 |
| 10790 | CDS | 11534 | 11602 | 11534 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 11266 | 11436 | 11266 | ID=MS.gene56763.t1.exon4;Parent=MS.gene56763.t1 |
| 10790 | CDS | 11266 | 11436 | 11266 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 10761 | 10904 | 10761 | ID=MS.gene56763.t1.exon5;Parent=MS.gene56763.t1 |
| 10790 | CDS | 10761 | 10904 | 10761 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 10442 | 10588 | 10442 | ID=MS.gene56763.t1.exon6;Parent=MS.gene56763.t1 |
| 10790 | CDS | 10442 | 10588 | 10442 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 10272 | 10337 | 10272 | ID=MS.gene56763.t1.exon7;Parent=MS.gene56763.t1 |
| 10790 | CDS | 10272 | 10337 | 10272 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 9955 | 10014 | 9955 | ID=MS.gene56763.t1.exon8;Parent=MS.gene56763.t1 |
| 10790 | CDS | 9955 | 10014 | 9955 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| 10790 | exon | 9428 | 9475 | 9428 | ID=MS.gene56763.t1.exon9;Parent=MS.gene56763.t1 |
| 10790 | CDS | 9428 | 9475 | 9428 | ID=cds.MS.gene56763.t1;Parent=MS.gene56763.t1 |
| Gene Sequence |
| Protein sequence |
