Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56759.t1 | XP_003588461.2 | 98.3 | 286 | 5 | 0 | 1 | 286 | 107 | 392 | 3.30E-154 | 554.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56759.t1 | Q1H5E9 | 80.6 | 289 | 52 | 1 | 1 | 285 | 109 | 397 | 2.5e-126 | 453.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56759.t1 | G7I294 | 98.3 | 286 | 5 | 0 | 1 | 286 | 107 | 392 | 2.4e-154 | 554.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051582 | MS.gene56759 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene053330 | MS.gene56759 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene56759 | 0.813812 | 2.12E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene56759 | 0.847459 | 1.14E-59 | -1.69E-46 |
| MS.gene056633 | MS.gene56759 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene058276 | MS.gene56759 | 0.827954 | 1.18E-54 | -1.69E-46 |
| MS.gene058746 | MS.gene56759 | 0.82047 | 6.74E-53 | -1.69E-46 |
| MS.gene059492 | MS.gene56759 | 0.869701 | 2.54E-66 | -1.69E-46 |
| MS.gene059494 | MS.gene56759 | 0.916694 | 1.31E-85 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56759.t1 | MTR_1g007490 | 98.252 | 286 | 5 | 0 | 1 | 286 | 107 | 392 | 0.0 | 579 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56759.t1 | AT5G48470 | 80.623 | 289 | 52 | 1 | 1 | 285 | 109 | 397 | 1.84e-169 | 475 |
Find 0 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGCATAAAATTAGAAAT+AGG | + | 8623:23227-23246 | None:intergenic | 15.0% |
| !! | AATCTATTACAATCTACATT+TGG | - | 8623:21373-21392 | MS.gene56759:intron | 20.0% |
| !! | AGATTGTAATAGATTATAGT+TGG | + | 8623:21368-21387 | None:intergenic | 20.0% |
| !! | ATATTTATCACTCAATTGAA+AGG | + | 8623:22108-22127 | None:intergenic | 20.0% |
| !! | CCATATAATTGTAAAATACT+TGG | - | 8623:22892-22911 | MS.gene56759:intron | 20.0% |
| !! | GTTATCAAAATAAAACAGTT+TGG | + | 8623:22948-22967 | None:intergenic | 20.0% |
| !!! | AAAAATAGAAAAGTATCAAC+TGG | + | 8623:23062-23081 | None:intergenic | 20.0% |
| !!! | CCAAGTATTTTACAATTATA+TGG | + | 8623:22895-22914 | None:intergenic | 20.0% |
| !!! | TGTGTAGATTTAAAACTAAA+TGG | - | 8623:22435-22454 | MS.gene56759:intron | 20.0% |
| ! | AATAGAAACATTTGTGGATT+TGG | + | 8623:23170-23189 | None:intergenic | 25.0% |
| ! | ACCATTCATCATAAAAACTA+TGG | + | 8623:22844-22863 | None:intergenic | 25.0% |
| ! | AGTTGAAAATTTCACTCTAT+TGG | - | 8623:22918-22937 | MS.gene56759:intron | 25.0% |
| ! | ATATATCAAGAACTGAGTAT+GGG | + | 8623:22976-22995 | None:intergenic | 25.0% |
| ! | GATTAATTGTTTACAGACAA+TGG | - | 8623:22181-22200 | MS.gene56759:CDS | 25.0% |
| ! | GTTGAAAATTTCACTCTATT+GGG | - | 8623:22919-22938 | MS.gene56759:intron | 25.0% |
| ! | TACAATTATATGGAATTCTC+AGG | + | 8623:22885-22904 | None:intergenic | 25.0% |
| ! | TAGAAATAGGTATTTATGAC+AGG | + | 8623:23214-23233 | None:intergenic | 25.0% |
| ! | TATATATCAAGAACTGAGTA+TGG | + | 8623:22977-22996 | None:intergenic | 25.0% |
| ! | TGTATGATAGAGTAATAATC+AGG | + | 8623:23001-23020 | None:intergenic | 25.0% |
| ! | TTAAACAACTGTATGAATGA+AGG | + | 8623:21878-21897 | None:intergenic | 25.0% |
| ! | TTCGAATGAAAAACAAAGTT+TGG | - | 8623:23503-23522 | MS.gene56759:intron | 25.0% |
| ! | TTGAAAATTTCACTCTATTG+GGG | - | 8623:22920-22939 | MS.gene56759:intron | 25.0% |
| ! | TTTGGAAATAGAAACATTTG+TGG | + | 8623:23176-23195 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGGTTCAAGTAAT+TGG | - | 8623:21655-21674 | MS.gene56759:intron | 25.0% |
| !!! | ATTTTGTCGTTTGTGTTAAA+AGG | - | 8623:22390-22409 | MS.gene56759:intron | 25.0% |
| !!! | TGGCTTGTTACTTTATAATA+TGG | + | 8623:23547-23566 | None:intergenic | 25.0% |
| !!! | TTTTGTCGTTTGTGTTAAAA+GGG | - | 8623:22391-22410 | MS.gene56759:intron | 25.0% |
| AAGGATAGAAAAAGTTAACC+AGG | + | 8623:22089-22108 | None:intergenic | 30.0% | |
| ACCGATATTTAATTAGCTCA+CGG | - | 8623:23300-23319 | MS.gene56759:intron | 30.0% | |
| ACTTGAACCTAAAAGATGAA+GGG | + | 8623:21652-21671 | None:intergenic | 30.0% | |
| AGTGGATCATGATGATTTAA+TGG | + | 8623:23567-23586 | None:intergenic | 30.0% | |
| ATATTTAATTAGCTCACGGA+AGG | - | 8623:23304-23323 | MS.gene56759:intron | 30.0% | |
| ATCGAAATATATGCACAGTT+AGG | + | 8623:21474-21493 | None:intergenic | 30.0% | |
| ATGATAAGAAATGTGATGCT+CGG | - | 8623:22567-22586 | MS.gene56759:CDS | 30.0% | |
| ATTATTAAGCTTGGTCTGTT+AGG | + | 8623:21428-21447 | None:intergenic | 30.0% | |
| GAACTTCTTAACTAAATTGG+TGG | - | 8623:22515-22534 | MS.gene56759:CDS | 30.0% | |
| GGTGAACTTCTTAACTAAAT+TGG | - | 8623:22512-22531 | MS.gene56759:CDS | 30.0% | |
| GTCGCAAAAAAATATGCTTT+CGG | - | 8623:22464-22483 | MS.gene56759:CDS | 30.0% | |
| TACTTGAACCTAAAAGATGA+AGG | + | 8623:21653-21672 | None:intergenic | 30.0% | |
| TCCGTGAGCTAATTAAATAT+CGG | + | 8623:23304-23323 | None:intergenic | 30.0% | |
| TGGTATACAACATTACAACT+TGG | + | 8623:21617-21636 | None:intergenic | 30.0% | |
| TTAAAAATCATAAGAGACGC+AGG | + | 8623:23428-23447 | None:intergenic | 30.0% | |
| TTATTAAGCTTGGTCTGTTA+GGG | + | 8623:21427-21446 | None:intergenic | 30.0% | |
| ! | AACAGTGTTTAAAATTCACG+TGG | + | 8623:22160-22179 | None:intergenic | 30.0% |
| ! | AGGTTGTATGCACATTATTT+TGG | + | 8623:23194-23213 | None:intergenic | 30.0% |
| ! | GCCATAGTTTTTATGATGAA+TGG | - | 8623:22840-22859 | MS.gene56759:intron | 30.0% |
| ! | TCATATCTGCTTTCCTTTTT+GGG | + | 8623:21697-21716 | None:intergenic | 30.0% |
| ! | TTCATATCTGCTTTCCTTTT+TGG | + | 8623:21698-21717 | None:intergenic | 30.0% |
| !!! | GATACTTTTCTATTTTTGCC+AGG | - | 8623:23065-23084 | MS.gene56759:CDS | 30.0% |
| AAAAGACAGAAGTCATTCAG+TGG | + | 8623:23585-23604 | None:intergenic | 35.0% | |
| AAGGTCGATCATGTAATCAA+GGG | + | 8623:21241-21260 | None:intergenic | 35.0% | |
| ACTTCTATCAAGTTCTGTAG+AGG | - | 8623:21921-21940 | MS.gene56759:intron | 35.0% | |
| ACTTGAAGATTCATATCCCA+GGG | - | 8623:21767-21786 | MS.gene56759:intron | 35.0% | |
| AGTTAAATGCTATCTCCTGA+AGG | + | 8623:23652-23671 | None:intergenic | 35.0% | |
| ATATATGCTGGATCTGACAA+TGG | - | 8623:23099-23118 | MS.gene56759:CDS | 35.0% | |
| CTATATCTGAATTCTTGCCA+AGG | - | 8623:22131-22150 | MS.gene56759:intron | 35.0% | |
| CTTAAAGAAGTTCCTTACCT+GGG | + | 8623:21565-21584 | None:intergenic | 35.0% | |
| GAATTTACACCTTATCATCC+TGG | + | 8623:21275-21294 | None:intergenic | 35.0% | |
| GAGGTAGAGTATATAATCCA+CGG | + | 8623:22313-22332 | None:intergenic | 35.0% | |
| TAAAATTCACGTGGTTTCCT+TGG | + | 8623:22151-22170 | None:intergenic | 35.0% | |
| TAGAGGTTCTCAATATTGGA+GGG | - | 8623:21938-21957 | MS.gene56759:intron | 35.0% | |
| TCGTTTGTGTTAAAAGGGAT+TGG | - | 8623:22396-22415 | MS.gene56759:intron | 35.0% | |
| TCTAAATGACATAGCTAACC+AGG | - | 8623:21795-21814 | MS.gene56759:intron | 35.0% | |
| TCTATGTAGAACTCCCAAAA+AGG | - | 8623:21681-21700 | MS.gene56759:CDS | 35.0% | |
| TCTGTAGAGGTTCTCAATAT+TGG | - | 8623:21934-21953 | MS.gene56759:intron | 35.0% | |
| TGAGTTGCGATTATTAAGCT+TGG | + | 8623:21437-21456 | None:intergenic | 35.0% | |
| TGGATTATATACTCTACCTC+CGG | - | 8623:22313-22332 | MS.gene56759:intron | 35.0% | |
| TTAAAGAAGTTCCTTACCTG+GGG | + | 8623:21564-21583 | None:intergenic | 35.0% | |
| TTCGGCATCATTAAAACTGT+TGG | - | 8623:22482-22501 | MS.gene56759:CDS | 35.0% | |
| ! | ATTTTCCTCTAGGTACAAGT+TGG | + | 8623:23469-23488 | None:intergenic | 35.0% |
| ! | TCAAAACTGCATTTTCCTCT+AGG | + | 8623:23479-23498 | None:intergenic | 35.0% |
| !! | TCAGAAAAGTGTTTGAGAAG+TGG | + | 8623:21588-21607 | None:intergenic | 35.0% |
| AAAGACACTTCAAGTCCTTC+AGG | - | 8623:23634-23653 | MS.gene56759:CDS | 40.0% | |
| ACACTCCATTCCATTTGGAA+AGG | - | 8623:21339-21358 | MS.gene56759:intron | 40.0% | |
| ACTTGTCTGTCATGATATCC+AGG | - | 8623:22742-22761 | MS.gene56759:intron | 40.0% | |
| AGAATCTGAGAAAGTAGCAG+TGG | - | 8623:21152-21171 | MS.gene56759:CDS | 40.0% | |
| ATCAAGGGCCATCATGAAAT+CGG | + | 8623:21226-21245 | None:intergenic | 40.0% | |
| ATTAAAACTGTTGGCAGTGC+AGG | - | 8623:22491-22510 | MS.gene56759:CDS | 40.0% | |
| CAAAACCAACTTGTACCTAG+AGG | - | 8623:23461-23480 | MS.gene56759:intron | 40.0% | |
| CAAGGTCGATCATGTAATCA+AGG | + | 8623:21242-21261 | None:intergenic | 40.0% | |
| CATATATACCAGACAAGACC+TGG | + | 8623:23086-23105 | None:intergenic | 40.0% | |
| CCAGGCTGATGATTTATTAG+AGG | - | 8623:21813-21832 | MS.gene56759:intron | 40.0% | |
| CCTCTAATAAATCATCAGCC+TGG | + | 8623:21816-21835 | None:intergenic | 40.0% | |
| CTTGAAGATTCATATCCCAG+GGG | - | 8623:21768-21787 | MS.gene56759:intron | 40.0% | |
| GACTTGAAGATTCATATCCC+AGG | - | 8623:21766-21785 | MS.gene56759:intron | 40.0% | |
| GATATTGCACTTGAAAGACG+CGG | + | 8623:22026-22045 | None:intergenic | 40.0% | |
| GATGGAATCCGATTTCATGA+TGG | - | 8623:21215-21234 | MS.gene56759:intron | 40.0% | |
| GCTTAAAGAAGTTCCTTACC+TGG | + | 8623:21566-21585 | None:intergenic | 40.0% | |
| GTAGAGGTTCTCAATATTGG+AGG | - | 8623:21937-21956 | MS.gene56759:intron | 40.0% | |
| GTCTTGTCTGGTATATATGC+TGG | - | 8623:23087-23106 | MS.gene56759:CDS | 40.0% | |
| GTTTCTCGAAACAGTCTCTA+AGG | - | 8623:22808-22827 | MS.gene56759:intron | 40.0% | |
| TAGTTGGAGACCTTTCCAAA+TGG | + | 8623:21352-21371 | None:intergenic | 40.0% | |
| TGAACCTAAAAGATGAAGGG+AGG | + | 8623:21649-21668 | None:intergenic | 40.0% | |
| TTGGATGAAAGAAATGACCG+TGG | - | 8623:22293-22312 | MS.gene56759:intron | 40.0% | |
| TTTCCAAATGGAATGGAGTG+TGG | + | 8623:21340-21359 | None:intergenic | 40.0% | |
| TTTGATGAACCTGCAAGCAA+AGG | + | 8623:23616-23635 | None:intergenic | 40.0% | |
| ! | AAATTGGTGGCCTTAAAACC+TGG | - | 8623:22528-22547 | MS.gene56759:CDS | 40.0% |
| ! | AACTCCTCCCTTCATCTTTT+AGG | - | 8623:21642-21661 | MS.gene56759:intron | 40.0% |
| ! | AATTGGTGGCCTTAAAACCT+GGG | - | 8623:22529-22548 | MS.gene56759:CDS | 40.0% |
| ! | ATGTCATTTAGATTTGCCCC+TGG | + | 8623:21787-21806 | None:intergenic | 40.0% |
| ! | CACAACTTTCCCAGGTTTTA+AGG | + | 8623:22541-22560 | None:intergenic | 40.0% |
| ! | TGGTAAGAGAGTTGATCAGA+TGG | - | 8623:21197-21216 | MS.gene56759:intron | 40.0% |
| ! | TGTCATTTAGATTTGCCCCT+GGG | + | 8623:21786-21805 | None:intergenic | 40.0% |
| !! | CAGAAGCTTTCTAAAATGCC+TGG | - | 8623:22068-22087 | MS.gene56759:intron | 40.0% |
| !! | CAGGCATTTTAGAAAGCTTC+TGG | + | 8623:22070-22089 | None:intergenic | 40.0% |
| !! | TATTTTTGCCAGGTCTTGTC+TGG | - | 8623:23075-23094 | MS.gene56759:CDS | 40.0% |
| !! | TTCAGTAGGATTTGCTGGAA+GGG | - | 8623:22638-22657 | MS.gene56759:intron | 40.0% |
| !! | TTTCAGTAGGATTTGCTGGA+AGG | - | 8623:22637-22656 | MS.gene56759:intron | 40.0% |
| !!! | CTCTAGGTACAAGTTGGTTT+TGG | + | 8623:23463-23482 | None:intergenic | 40.0% |
| !!! | TAGGTACAAGTTGGTTTTGG+TGG | + | 8623:23460-23479 | None:intergenic | 40.0% |
| AAAACCTGGGAAAGTTGTGC+TGG | - | 8623:22542-22561 | MS.gene56759:CDS | 45.0% | |
| AACTAAAAAATGCCCACCCC+AGG | - | 8623:21545-21564 | MS.gene56759:intron | 45.0% | |
| ACTGTTTCGAGAAACATGCC+CGG | + | 8623:22803-22822 | None:intergenic | 45.0% | |
| AGAAGAAGCCCGTGATATGA+TGG | - | 8623:22259-22278 | MS.gene56759:CDS | 45.0% | |
| AGGGTTTCAGTAGGATTTGC+TGG | - | 8623:22633-22652 | MS.gene56759:intron | 45.0% | |
| ATATCCAGCACAACTTTCCC+AGG | + | 8623:22549-22568 | None:intergenic | 45.0% | |
| ATGAAGGGAGGAGTTCACAT+TGG | + | 8623:21637-21656 | None:intergenic | 45.0% | |
| CAGATCGAAAACTGCTTGCA+AGG | - | 8623:22222-22241 | MS.gene56759:CDS | 45.0% | |
| CATCCACACTCCATTCCATT+TGG | - | 8623:21334-21353 | MS.gene56759:intron | 45.0% | |
| GAAGAAGCCCGTGATATGAT+GGG | - | 8623:22260-22279 | MS.gene56759:CDS | 45.0% | |
| GATGATGACAGGGTTTCAGT+AGG | - | 8623:22624-22643 | MS.gene56759:intron | 45.0% | |
| GGAGACCTTTCCAAATGGAA+TGG | + | 8623:21347-21366 | None:intergenic | 45.0% | |
| GTGATGCTCGGAAAAGATGA+AGG | - | 8623:22579-22598 | MS.gene56759:CDS | 45.0% | |
| TCACATCAACATACCTCAGC+CGG | + | 8623:22335-22354 | None:intergenic | 45.0% | |
| TCACTGCACAACATCTGGAA+TGG | - | 8623:23124-23143 | MS.gene56759:intron | 45.0% | |
| TGAACCTGCAAGCAAAGGAA+AGG | + | 8623:23611-23630 | None:intergenic | 45.0% | |
| TGAGAAAGTAGCAGTGGAGT+TGG | - | 8623:21158-21177 | MS.gene56759:intron | 45.0% | |
| TGAGAAGGACCAGGATGATA+AGG | - | 8623:21263-21282 | MS.gene56759:intron | 45.0% | |
| TGGTATCACTGCACAACATC+TGG | - | 8623:23119-23138 | MS.gene56759:CDS | 45.0% | |
| TGTTCCTTTCCTTTGCTTGC+AGG | - | 8623:23604-23623 | MS.gene56759:CDS | 45.0% | |
| TTAGCTCACGGAAGGTAACT+AGG | - | 8623:23312-23331 | MS.gene56759:intron | 45.0% | |
| TTGGCTGCACAAGGAGTTAT+TGG | - | 8623:21177-21196 | MS.gene56759:intron | 45.0% | |
| ! | AGTTTTCGATCTGGCACAAC+AGG | + | 8623:22215-22234 | None:intergenic | 45.0% |
| ! | CACTGCACAACATCTGGAAT+GGG | - | 8623:23125-23144 | MS.gene56759:intron | 45.0% |
| ! | CTTGCAAGCAGTTTTCGATC+TGG | + | 8623:22224-22243 | None:intergenic | 45.0% |
| ! | TCAACTGGAAGTGCAAACAC+AGG | + | 8623:23047-23066 | None:intergenic | 45.0% |
| ! | TGGCAACGATGATGATGACA+GGG | - | 8623:22614-22633 | MS.gene56759:intron | 45.0% |
| !! | GCTGGTGGCGGTTTATTTAA+AGG | - | 8623:21736-21755 | MS.gene56759:intron | 45.0% |
| AAAAATGCCCACCCCAGGTA+AGG | - | 8623:21550-21569 | MS.gene56759:intron | 50.0% | |
| AAGAAGTTCCTTACCTGGGG+TGG | + | 8623:21561-21580 | None:intergenic | 50.0% | |
| AGAAGTTCCTTACCTGGGGT+GGG | + | 8623:21560-21579 | None:intergenic | 50.0% | |
| AGTGCAAACACAGGCAGAGA+AGG | + | 8623:23038-23057 | None:intergenic | 50.0% | |
| ATATACTCTACCTCCGGCTG+AGG | - | 8623:22319-22338 | MS.gene56759:intron | 50.0% | |
| ATCGCAACTCACACACATGC+TGG | - | 8623:21446-21465 | MS.gene56759:intron | 50.0% | |
| CATGATCGACCTTGCTGAGA+AGG | - | 8623:21248-21267 | MS.gene56759:intron | 50.0% | |
| CTGTTTCGAGAAACATGCCC+GGG | + | 8623:22802-22821 | None:intergenic | 50.0% | |
| GATATCCAGGCAAGTGTGAC+AGG | - | 8623:22755-22774 | MS.gene56759:intron | 50.0% | |
| GTGAGTCGAATTGGATGACG+TGG | - | 8623:22660-22679 | MS.gene56759:intron | 50.0% | |
| TCGCAACTCACACACATGCT+GGG | - | 8623:21447-21466 | MS.gene56759:intron | 50.0% | |
| ! | AAGCCCGTGATATGATGGGA+GGG | - | 8623:22264-22283 | MS.gene56759:CDS | 50.0% |
| ! | CTGGCAACGATGATGATGAC+AGG | - | 8623:22613-22632 | MS.gene56759:intron | 50.0% |
| ! | GATGAAGGTGCAGACAACAC+TGG | - | 8623:22594-22613 | MS.gene56759:intron | 50.0% |
| !! | TATGATGGGAGGGGGGATTT+TGG | - | 8623:22274-22293 | MS.gene56759:intron | 50.0% |
| !!! | AGTTGGTTTTGGTGGCAACG+TGG | + | 8623:23452-23471 | None:intergenic | 50.0% |
| CATCAACATACCTCAGCCGG+AGG | + | 8623:22332-22351 | None:intergenic | 55.0% | |
| CATCCTGGTCCTTCTCAGCA+AGG | + | 8623:21260-21279 | None:intergenic | 55.0% | |
| GATGCAGCGCAAGTCACTGT+TGG | - | 8623:21491-21510 | MS.gene56759:intron | 55.0% | |
| GCTGGAAGGGTGAGTCGAAT+TGG | - | 8623:22651-22670 | MS.gene56759:intron | 55.0% | |
| TCCAGGCAAGTGTGACAGGA+CGG | - | 8623:22759-22778 | MS.gene56759:intron | 55.0% | |
| TCCCCCCTCCCATCATATCA+CGG | + | 8623:22271-22290 | None:intergenic | 55.0% | |
| TTGTTACGCCGAGTTGCAGC+TGG | - | 8623:21718-21737 | MS.gene56759:intron | 55.0% | |
| ! | AGCCCGTGATATGATGGGAG+GGG | - | 8623:22265-22284 | MS.gene56759:CDS | 55.0% |
| ! | GAAGCCCGTGATATGATGGG+AGG | - | 8623:22263-22282 | MS.gene56759:CDS | 55.0% |
| AACCGCCACCAGCTGCAACT+CGG | + | 8623:21729-21748 | None:intergenic | 60.0% | |
| AGAAACATGCCCGGGCGTAC+GGG | + | 8623:22794-22813 | None:intergenic | 60.0% | |
| CCCCCCTCCCATCATATCAC+GGG | + | 8623:22270-22289 | None:intergenic | 60.0% | |
| CGACCTTGCTGAGAAGGACC+AGG | - | 8623:21254-21273 | MS.gene56759:intron | 60.0% | |
| GAGAAACATGCCCGGGCGTA+CGG | + | 8623:22795-22814 | None:intergenic | 60.0% | |
| GCAGTGGAGTTGGCTGCACA+AGG | - | 8623:21168-21187 | MS.gene56759:intron | 60.0% | |
| TCCGTCCTGTCACACTTGCC+TGG | + | 8623:22763-22782 | None:intergenic | 60.0% | |
| TTACGCCGAGTTGCAGCTGG+TGG | - | 8623:21721-21740 | MS.gene56759:intron | 60.0% | |
| ! | CCCGTGATATGATGGGAGGG+GGG | - | 8623:22267-22286 | MS.gene56759:CDS | 60.0% |
| ! | GCCCGTGATATGATGGGAGG+GGG | - | 8623:22266-22285 | MS.gene56759:CDS | 60.0% |
| AAGCCACATCCCGTACGCCC+GGG | - | 8623:22782-22801 | MS.gene56759:intron | 65.0% | |
| GAAGCCACATCCCGTACGCC+CGG | - | 8623:22781-22800 | MS.gene56759:intron | 65.0% | |
| ATGCCCGGGCGTACGGGATG+TGG | + | 8623:22788-22807 | None:intergenic | 70.0% | |
| CGCCGAGTTGCAGCTGGTGG+CGG | - | 8623:21724-21743 | MS.gene56759:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8623 | gene | 21129 | 23673 | 21129 | ID=MS.gene56759 |
| 8623 | mRNA | 21129 | 23673 | 21129 | ID=MS.gene56759.t1;Parent=MS.gene56759 |
| 8623 | exon | 23518 | 23673 | 23518 | ID=MS.gene56759.t1.exon1;Parent=MS.gene56759.t1 |
| 8623 | CDS | 23518 | 23673 | 23518 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| 8623 | exon | 23236 | 23304 | 23236 | ID=MS.gene56759.t1.exon2;Parent=MS.gene56759.t1 |
| 8623 | CDS | 23236 | 23304 | 23236 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| 8623 | exon | 22968 | 23138 | 22968 | ID=MS.gene56759.t1.exon3;Parent=MS.gene56759.t1 |
| 8623 | CDS | 22968 | 23138 | 22968 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| 8623 | exon | 22462 | 22605 | 22462 | ID=MS.gene56759.t1.exon4;Parent=MS.gene56759.t1 |
| 8623 | CDS | 22462 | 22605 | 22462 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| 8623 | exon | 22143 | 22289 | 22143 | ID=MS.gene56759.t1.exon5;Parent=MS.gene56759.t1 |
| 8623 | CDS | 22143 | 22289 | 22143 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| 8623 | exon | 21973 | 22038 | 21973 | ID=MS.gene56759.t1.exon6;Parent=MS.gene56759.t1 |
| 8623 | CDS | 21973 | 22038 | 21973 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| 8623 | exon | 21656 | 21715 | 21656 | ID=MS.gene56759.t1.exon7;Parent=MS.gene56759.t1 |
| 8623 | CDS | 21656 | 21715 | 21656 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| 8623 | exon | 21129 | 21176 | 21129 | ID=MS.gene56759.t1.exon8;Parent=MS.gene56759.t1 |
| 8623 | CDS | 21129 | 21176 | 21129 | ID=cds.MS.gene56759.t1;Parent=MS.gene56759.t1 |
| Gene Sequence |
| Protein sequence |
