Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060219.t1 | XP_003596313.1 | 96.2 | 527 | 20 | 0 | 1 | 527 | 1 | 527 | 9.50E-256 | 892.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060219.t1 | Q15054 | 29.1 | 220 | 147 | 5 | 10 | 220 | 7 | 226 | 6.9e-13 | 77.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060219.t1 | G7ITE6 | 96.2 | 527 | 20 | 0 | 1 | 527 | 1 | 527 | 6.8e-256 | 892.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060219 | MS.gene63395 | 0.823039 | 1.72E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04418 | MS.gene060219 | PPI |
| MS.gene52656 | MS.gene060219 | PPI |
| MS.gene060219 | MS.gene40912 | PPI |
| MS.gene017982 | MS.gene060219 | PPI |
| MS.gene05640 | MS.gene060219 | PPI |
| MS.gene072401 | MS.gene060219 | PPI |
| MS.gene049266 | MS.gene060219 | PPI |
| MS.gene060219 | MS.gene04620 | PPI |
| MS.gene04079 | MS.gene060219 | PPI |
| MS.gene08109 | MS.gene060219 | PPI |
| MS.gene06380 | MS.gene060219 | PPI |
| MS.gene060219 | MS.gene013296 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060219.t1 | MTR_2g075820 | 96.395 | 527 | 19 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1036 |
| MS.gene060219.t1 | MTR_2g075820 | 96.205 | 527 | 19 | 1 | 1 | 527 | 1 | 526 | 0.0 | 1029 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060219.t1 | AT1G78650 | 44.465 | 542 | 250 | 13 | 1 | 525 | 1 | 508 | 3.47e-118 | 358 |
Find 107 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATTCAATTTCGTGAATT+AGG | 0.091135 | 2.3:+21039926 | None:intergenic |
| GAGGTTCGTTGGCAAGCTTC+TGG | 0.168208 | 2.3:-21036687 | MS.gene060219:CDS |
| TCCTTATTTATACAAATTTC+CGG | 0.231434 | 2.3:+21036069 | None:intergenic |
| GTATCCTTGTCATCTTTCTT+TGG | 0.236749 | 2.3:+21035690 | None:intergenic |
| TCCGGAAATTTGTATAAATA+AGG | 0.285503 | 2.3:-21036070 | MS.gene060219:CDS |
| TGAAAGAATATTGCCCTGTT+TGG | 0.290751 | 2.3:+21035068 | None:intergenic |
| GATAAAAGTGGCTCTGTTAA+TGG | 0.294110 | 2.3:-21036709 | MS.gene060219:CDS |
| CTCTGCAACTTCTCAGTAGA+TGG | 0.294392 | 2.3:+21036099 | None:intergenic |
| CTCTGGCACAGCGCAAGGCT+TGG | 0.297572 | 2.3:+21036645 | None:intergenic |
| CTGCTTCATGAGCACAAGTT+TGG | 0.297917 | 2.3:+21036439 | None:intergenic |
| TGTTATATGTAGGTTGCTTC+AGG | 0.309652 | 2.3:-21039578 | MS.gene060219:intron |
| GTGATAACTGATAAATCTTT+TGG | 0.315080 | 2.3:+21036144 | None:intergenic |
| GTGAATTAGGGATAGGGTTT+CGG | 0.334535 | 2.3:+21039939 | None:intergenic |
| AGATTCAATTTCGTGAATTA+GGG | 0.336212 | 2.3:+21039927 | None:intergenic |
| TCCCAAGCAATTATCAGCTT+TGG | 0.343926 | 2.3:+21038352 | None:intergenic |
| TCTTTAGATGACAGTTTACT+AGG | 0.350822 | 2.3:+21036285 | None:intergenic |
| TACCATGTAAGGCTTGTTAC+TGG | 0.354891 | 2.3:-21039478 | MS.gene060219:CDS |
| CAAAGCACAGCTGCATCCTT+TGG | 0.355427 | 2.3:+21038419 | None:intergenic |
| CTTCAGTAACTGAAGTAGTC+TGG | 0.361033 | 2.3:-21035731 | MS.gene060219:intron |
| TATCATCAAATGAAGCAAAA+AGG | 0.364120 | 2.3:-21039718 | MS.gene060219:intron |
| AGAAATTAAACCGTTGGTTA+AGG | 0.364213 | 2.3:-21036202 | MS.gene060219:CDS |
| GAAAGAATATTGCCCTGTTT+GGG | 0.370990 | 2.3:+21035069 | None:intergenic |
| TGGTGTATGCTTTGTCTGGC+TGG | 0.371747 | 2.3:-21039522 | MS.gene060219:CDS |
| TCTGGCACAGCGCAAGGCTT+GGG | 0.374959 | 2.3:+21036646 | None:intergenic |
| ATCACCAAGTGCACAAGTAC+TGG | 0.382003 | 2.3:-21036126 | MS.gene060219:CDS |
| GTTACTGGGACAATGCTTGC+AGG | 0.384169 | 2.3:-21039463 | MS.gene060219:intron |
| AGGTTCGTTGGCAAGCTTCT+GGG | 0.384533 | 2.3:-21036686 | MS.gene060219:CDS |
| CAAAGGATGCAGCTGTGCTT+TGG | 0.395728 | 2.3:-21038418 | MS.gene060219:CDS |
| CACCAACCCGTTAACAGCTT+TGG | 0.399177 | 2.3:+21035620 | None:intergenic |
| AAACATAAAGGATCCCAAAC+AGG | 0.405833 | 2.3:-21035082 | MS.gene060219:CDS |
| TGCTTCATGAGCACAAGTTT+GGG | 0.407375 | 2.3:+21036440 | None:intergenic |
| TGAACAACATTACTCTTTGT+TGG | 0.409982 | 2.3:+21036922 | None:intergenic |
| GCTGGTGGCTTCTTAGTTGC+CGG | 0.417944 | 2.3:+21035147 | None:intergenic |
| TTCCAAAGCTGATAATTGCT+TGG | 0.418548 | 2.3:-21038354 | MS.gene060219:CDS |
| GAAGTGGTGTATGCTTTGTC+TGG | 0.418622 | 2.3:-21039526 | MS.gene060219:CDS |
| CCTGTTGGATGATCTTCTTA+AGG | 0.423040 | 2.3:+21036377 | None:intergenic |
| TCCAAAGCTGATAATTGCTT+GGG | 0.428396 | 2.3:-21038353 | MS.gene060219:CDS |
| AGTAAAATCTGTAGTAGGCT+TGG | 0.430762 | 2.3:-21036947 | MS.gene060219:CDS |
| CCAGTAGTATTTGATGTAGC+TGG | 0.432970 | 2.3:+21035129 | None:intergenic |
| ATATCTACCAAAGCTGTTAA+CGG | 0.434286 | 2.3:-21035627 | MS.gene060219:CDS |
| TTGTGCTCATGAAGCAGTAC+TGG | 0.437428 | 2.3:-21036433 | MS.gene060219:CDS |
| TATCTACCAAAGCTGTTAAC+GGG | 0.445062 | 2.3:-21035626 | MS.gene060219:intron |
| GTAAAATCTGTAGTAGGCTT+GGG | 0.450654 | 2.3:-21036946 | MS.gene060219:CDS |
| CAATTTCGTGAATTAGGGAT+AGG | 0.451183 | 2.3:+21039932 | None:intergenic |
| GAAGATCATCCAACAGGAAA+AGG | 0.454467 | 2.3:-21036371 | MS.gene060219:CDS |
| ATAATTGCTTGGGAGACAAT+AGG | 0.464445 | 2.3:-21038343 | MS.gene060219:intron |
| CCAGAAGTAAAATCTGTAGT+AGG | 0.467548 | 2.3:-21036952 | MS.gene060219:CDS |
| CAAGAAAGCAGGAAACATAA+AGG | 0.467823 | 2.3:-21035094 | MS.gene060219:CDS |
| GTATTCCTAGCTACCATGTA+AGG | 0.471927 | 2.3:-21039489 | MS.gene060219:CDS |
| AAGGAACGAGGATGGACAAC+CGG | 0.480561 | 2.3:-21036989 | MS.gene060219:CDS |
| TTTCTCCTCTTAGGTGAACC+TGG | 0.487423 | 2.3:+21036027 | None:intergenic |
| CCAGCTACATCAAATACTAC+TGG | 0.487443 | 2.3:-21035129 | MS.gene060219:CDS |
| GGAGAAAAGTGATGAAGACT+AGG | 0.493998 | 2.3:-21036011 | MS.gene060219:CDS |
| CTCTGTTAATGGAGGTTCGT+TGG | 0.494085 | 2.3:-21036698 | MS.gene060219:CDS |
| CCTTAAGAAGATCATCCAAC+AGG | 0.498177 | 2.3:-21036377 | MS.gene060219:CDS |
| GAAGCACAGGAAGAGTTTGA+TGG | 0.504579 | 2.3:-21038482 | MS.gene060219:CDS |
| TTCAGTAACTGAAGTAGTCT+GGG | 0.507974 | 2.3:-21035730 | MS.gene060219:intron |
| TTTCCCAGTACTTGTGCACT+TGG | 0.512191 | 2.3:+21036122 | None:intergenic |
| ACCGGTAGAAATTAAACCGT+TGG | 0.513407 | 2.3:-21036208 | MS.gene060219:CDS |
| TCTCTCCAGGTTCACCTAAG+AGG | 0.514966 | 2.3:-21036032 | MS.gene060219:CDS |
| AGCAATGGTACAGGAAATGC+AGG | 0.517649 | 2.3:-21036814 | MS.gene060219:CDS |
| ACCAACGGTTTAATTTCTAC+CGG | 0.517859 | 2.3:+21036207 | None:intergenic |
| AATTTCGTGAATTAGGGATA+GGG | 0.523845 | 2.3:+21039933 | None:intergenic |
| AACATGATTTCAAAACCTGC+AGG | 0.524551 | 2.3:-21036613 | MS.gene060219:intron |
| AGAGGAGGAAGCAAGAAAGC+AGG | 0.527546 | 2.3:-21035105 | MS.gene060219:CDS |
| TCATTGCATTTCCAGCGCAC+CGG | 0.539369 | 2.3:-21035166 | MS.gene060219:intron |
| GGTTCGTTGGCAAGCTTCTG+GGG | 0.540265 | 2.3:-21036685 | MS.gene060219:CDS |
| ACAAGCCTTACATGGTAGCT+AGG | 0.543674 | 2.3:+21039484 | None:intergenic |
| AGGGTTTCGGTGTTCGACAT+CGG | 0.547592 | 2.3:+21039952 | None:intergenic |
| TCTGGAGTGGCAGAAACTGC+CGG | 0.547602 | 2.3:+21036970 | None:intergenic |
| AATTTCAGGTTTCATACAAG+TGG | 0.549313 | 2.3:-21039760 | MS.gene060219:intron |
| AAGAGTGAAAGCAATGGTAC+AGG | 0.550651 | 2.3:-21036823 | MS.gene060219:CDS |
| ACATCAAATACTACTGGAAG+AGG | 0.555136 | 2.3:-21035123 | MS.gene060219:CDS |
| AAGTCTCTTCCCTTGCCCGC+AGG | 0.555927 | 2.3:-21036751 | MS.gene060219:CDS |
| TAACTGAAGTAGTCTGGGAG+GGG | 0.560193 | 2.3:-21035725 | MS.gene060219:CDS |
| CAAGCCTTGCGCTGTGCCAG+AGG | 0.561439 | 2.3:-21036644 | MS.gene060219:CDS |
| CGTATCAGATCAACTTCAAG+TGG | 0.561762 | 2.3:-21039902 | MS.gene060219:intron |
| CTTTAGATGACAGTTTACTA+GGG | 0.562262 | 2.3:+21036286 | None:intergenic |
| ACCATGTAAGGCTTGTTACT+GGG | 0.562390 | 2.3:-21039477 | MS.gene060219:CDS |
| AAGCACAGGAAGAGTTTGAT+GGG | 0.563128 | 2.3:-21038481 | MS.gene060219:CDS |
| TGATCTCAAAACACAGAATG+TGG | 0.563793 | 2.3:-21036857 | MS.gene060219:CDS |
| TACAACTAAGAAAGCTGATA+CGG | 0.567031 | 2.3:-21035670 | MS.gene060219:CDS |
| TCCCAGTAACAAGCCTTACA+TGG | 0.567820 | 2.3:+21039476 | None:intergenic |
| TAGCTTGCACACTATATACC+TGG | 0.568621 | 2.3:+21038447 | None:intergenic |
| TGATGGGAAATGCTCAGTCC+AGG | 0.568705 | 2.3:-21038465 | MS.gene060219:CDS |
| GAAGTTGCAGAGCAATGCTC+CGG | 0.570583 | 2.3:-21036088 | MS.gene060219:CDS |
| TCACCAAGTGCACAAGTACT+GGG | 0.574444 | 2.3:-21036125 | MS.gene060219:CDS |
| AACTGAAGTAGTCTGGGAGG+GGG | 0.575395 | 2.3:-21035724 | MS.gene060219:CDS |
| GATCATCCAACAGGAAAAGG+AGG | 0.581341 | 2.3:-21036368 | MS.gene060219:CDS |
| GTAGTATTTGATGTAGCTGG+TGG | 0.582098 | 2.3:+21035132 | None:intergenic |
| ACATGAGGATGGGTTGGAAG+TGG | 0.582631 | 2.3:-21039542 | MS.gene060219:CDS |
| AAAGGACAAGCTGATAAAAG+TGG | 0.583030 | 2.3:-21036721 | MS.gene060219:CDS |
| ATTGATGAACGAGGAAGAGA+AGG | 0.588930 | 2.3:-21035988 | MS.gene060219:intron |
| GTAACTGAAGTAGTCTGGGA+GGG | 0.592954 | 2.3:-21035726 | MS.gene060219:CDS |
| AACATAAAGGATCCCAAACA+GGG | 0.599044 | 2.3:-21035081 | MS.gene060219:CDS |
| ACTCTCTCATCCTTAACCAA+CGG | 0.611531 | 2.3:+21036192 | None:intergenic |
| TCAAATACTACTGGAAGAGG+AGG | 0.613938 | 2.3:-21035120 | MS.gene060219:CDS |
| TGTGCTCATGAAGCAGTACT+GGG | 0.619552 | 2.3:-21036432 | MS.gene060219:CDS |
| TGTGCAAGCTAGTATTCCAA+AGG | 0.641371 | 2.3:-21038435 | MS.gene060219:CDS |
| AAAAGTGGCTCTGTTAATGG+AGG | 0.643109 | 2.3:-21036706 | MS.gene060219:CDS |
| AGAGCCAAAGAAAGATGACA+AGG | 0.649680 | 2.3:-21035694 | MS.gene060219:CDS |
| ATCATCCAACAGGAAAAGGA+GGG | 0.654162 | 2.3:-21036367 | MS.gene060219:CDS |
| AGTGATGACGATGATAATCA+AGG | 0.657684 | 2.3:-21036405 | MS.gene060219:CDS |
| GATGTCAAGAGTGAAAGCAA+TGG | 0.672437 | 2.3:-21036829 | MS.gene060219:CDS |
| CATCAGTTTAGCATCAGATG+AGG | 0.673654 | 2.3:-21036310 | MS.gene060219:CDS |
| AGTAACTGAAGTAGTCTGGG+AGG | 0.694022 | 2.3:-21035727 | MS.gene060219:CDS |
| AAGACTAGGATTGATGAACG+AGG | 0.746915 | 2.3:-21035997 | MS.gene060219:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATATTCAATAAAC+CGG | + | chr2.3:21038421-21038440 | None:intergenic | 10.0% |
| !!! | AAATATTAGATTGATTATTT+TGG | + | chr2.3:21037736-21037755 | None:intergenic | 10.0% |
| !!! | GATATAATATAATATGATTT+TGG | - | chr2.3:21037428-21037447 | MS.gene060219:intron | 10.0% |
| !! | ATGTTCAGTTAAAAAAAAAT+TGG | - | chr2.3:21036384-21036403 | MS.gene060219:CDS | 15.0% |
| !! | TATAATAATTATAGTTGTAG+CGG | - | chr2.3:21035575-21035594 | MS.gene060219:intron | 15.0% |
| !!! | AAGAAATTTAGGATAAAAAA+AGG | + | chr2.3:21035195-21035214 | None:intergenic | 15.0% |
| !!! | AATTATGTCAGTAAATTTTT+TGG | + | chr2.3:21038510-21038529 | None:intergenic | 15.0% |
| !!! | AGTATTTTAGTTTTTTGATA+AGG | - | chr2.3:21036705-21036724 | MS.gene060219:CDS | 15.0% |
| !!! | ATGAAAATTTGTTTAATTTC+AGG | - | chr2.3:21035222-21035241 | MS.gene060219:intron | 15.0% |
| !!! | TAATTTTTATCTCATAAACT+TGG | - | chr2.3:21036027-21036046 | MS.gene060219:CDS | 15.0% |
| !!! | TATTAGTCTATTAGAATATA+TGG | - | chr2.3:21036748-21036767 | MS.gene060219:CDS | 15.0% |
| !!! | TTGAAAATTTTGTTATATGT+AGG | - | chr2.3:21035408-21035427 | MS.gene060219:intron | 15.0% |
| !!! | TTTTAATATATCATGAAATC+AGG | + | chr2.3:21039573-21039592 | None:intergenic | 15.0% |
| !!! | TTTTTTTATGAACACTAAAT+TGG | + | chr2.3:21037272-21037291 | None:intergenic | 15.0% |
| !! | AACTAACTCAATTTAGATTT+AGG | - | chr2.3:21036320-21036339 | MS.gene060219:CDS | 20.0% |
| !! | AATCTAATATTTCAATCTTC+TGG | - | chr2.3:21037744-21037763 | MS.gene060219:intron | 20.0% |
| !! | ACATGAAAGAAACATTATTA+GGG | + | chr2.3:21037145-21037164 | None:intergenic | 20.0% |
| !! | ACTTATATATGCATGATTAT+CGG | - | chr2.3:21039163-21039182 | MS.gene060219:intron | 20.0% |
| !! | CATATTATAGTCATACATAA+AGG | + | chr2.3:21039097-21039116 | None:intergenic | 20.0% |
| !! | GGGAAAAAAATTACAATTAA+TGG | + | chr2.3:21035940-21035959 | None:intergenic | 20.0% |
| !! | TCATGAAATCAAAGAAATTT+AGG | + | chr2.3:21035206-21035225 | None:intergenic | 20.0% |
| !! | TCTGATATTAAAATGTAGAA+TGG | - | chr2.3:21037406-21037425 | MS.gene060219:intron | 20.0% |
| !!! | AAGTTTTAAAATGTTATTGC+TGG | + | chr2.3:21039675-21039694 | None:intergenic | 20.0% |
| !!! | GAATTGAATGAATGAAATTT+TGG | - | chr2.3:21039413-21039432 | MS.gene060219:intron | 20.0% |
| !!! | TCCTTATTTATACAAATTTC+CGG | + | chr2.3:21038930-21038949 | None:intergenic | 20.0% |
| ! | AAATAAGGATAGTGCAAAAA+AGG | - | chr2.3:21038941-21038960 | MS.gene060219:intron | 25.0% |
| ! | AACTCAATTTAGATTTAGGT+GGG | - | chr2.3:21036324-21036343 | MS.gene060219:CDS | 25.0% |
| ! | AGATTCAATTTCGTGAATTA+GGG | + | chr2.3:21035072-21035091 | None:intergenic | 25.0% |
| ! | ATAAGAAAATAGCACAACAA+GGG | + | chr2.3:21037362-21037381 | None:intergenic | 25.0% |
| ! | ATAATATGGAAAAAAGAACC+TGG | + | chr2.3:21039061-21039080 | None:intergenic | 25.0% |
| ! | ATATATTCAATAAACCGGAA+TGG | + | chr2.3:21038416-21038435 | None:intergenic | 25.0% |
| ! | CACATGAAAGAAACATTATT+AGG | + | chr2.3:21037146-21037165 | None:intergenic | 25.0% |
| ! | CTTATATATGCATGATTATC+GGG | - | chr2.3:21039164-21039183 | MS.gene060219:intron | 25.0% |
| ! | CTTCATTAATGAAGTTATTG+AGG | + | chr2.3:21037802-21037821 | None:intergenic | 25.0% |
| ! | GAACTAATAGTCATACATAA+AGG | + | chr2.3:21039202-21039221 | None:intergenic | 25.0% |
| ! | GATAATTTGAGTAAATGTCT+TGG | - | chr2.3:21035667-21035686 | MS.gene060219:CDS | 25.0% |
| ! | TAACTCAATTTAGATTTAGG+TGG | - | chr2.3:21036323-21036342 | MS.gene060219:CDS | 25.0% |
| ! | TATAACTATAATCATCGAGA+AGG | + | chr2.3:21038459-21038478 | None:intergenic | 25.0% |
| ! | TATCATCAAATGAAGCAAAA+AGG | - | chr2.3:21035278-21035297 | MS.gene060219:intron | 25.0% |
| ! | TATGAGCAATTCATGAATAT+AGG | - | chr2.3:21039608-21039627 | MS.gene060219:intron | 25.0% |
| ! | TCCGGAAATTTGTATAAATA+AGG | - | chr2.3:21038926-21038945 | MS.gene060219:intron | 25.0% |
| ! | TTGAAAACAAACATAACTGA+TGG | - | chr2.3:21036128-21036147 | MS.gene060219:CDS | 25.0% |
| !! | ATAACTGATAAATCTTTTGG+TGG | + | chr2.3:21038852-21038871 | None:intergenic | 25.0% |
| !! | CTCTAATTCTTTTGTACAAA+GGG | - | chr2.3:21037980-21037999 | MS.gene060219:intron | 25.0% |
| !! | GAACTGACAAATTTTCTTTT+TGG | - | chr2.3:21036886-21036905 | MS.gene060219:CDS | 25.0% |
| !! | GTACTTTCAATCTGATTTTA+TGG | - | chr2.3:21039718-21039737 | MS.gene060219:intron | 25.0% |
| !! | GTGATAACTGATAAATCTTT+TGG | + | chr2.3:21038855-21038874 | None:intergenic | 25.0% |
| !! | TCTCTAATTCTTTTGTACAA+AGG | - | chr2.3:21037979-21037998 | MS.gene060219:intron | 25.0% |
| !! | TGAAATTTTCGTAAAGAACT+AGG | + | chr2.3:21039144-21039163 | None:intergenic | 25.0% |
| !!! | AAGGCTTTGAAATTGAAAAT+CGG | + | chr2.3:21035176-21035195 | None:intergenic | 25.0% |
| !!! | ATTGATGGGTTTTTTTACTA+TGG | - | chr2.3:21035367-21035386 | MS.gene060219:intron | 25.0% |
| !!! | GAAATTTTTTCTCAACTCAT+TGG | + | chr2.3:21036422-21036441 | None:intergenic | 25.0% |
| !!! | TGACTTTTTGTCATTTTGTT+TGG | + | chr2.3:21038739-21038758 | None:intergenic | 25.0% |
| !!! | TGCTTTGAATTTTGATTTAC+CGG | - | chr2.3:21038770-21038789 | MS.gene060219:intron | 25.0% |
| !!! | TTATTTCTAAAGTTGCTTGA+AGG | - | chr2.3:21039533-21039552 | MS.gene060219:CDS | 25.0% |
| AACGTTACCCAAAAAATTTC+TGG | + | chr2.3:21036968-21036987 | None:intergenic | 30.0% | |
| AAGCAAGTCATGATATTAGT+AGG | - | chr2.3:21036792-21036811 | MS.gene060219:CDS | 30.0% | |
| AATTGACCATACCAAAATGA+TGG | + | chr2.3:21036273-21036292 | None:intergenic | 30.0% | |
| AATTTCGTGAATTAGGGATA+GGG | + | chr2.3:21035066-21035085 | None:intergenic | 30.0% | |
| AGAATCACAGTATACTTCAA+GGG | + | chr2.3:21039483-21039502 | None:intergenic | 30.0% | |
| AGTATACTGTGATTCTCATT+AGG | - | chr2.3:21039487-21039506 | MS.gene060219:CDS | 30.0% | |
| AGTCATACATAAAGGTGATA+AGG | + | chr2.3:21039194-21039213 | None:intergenic | 30.0% | |
| ATAGCAGTAGTTATGTAACA+TGG | - | chr2.3:21038479-21038498 | MS.gene060219:CDS | 30.0% | |
| ATATCTACCAAAGCTGTTAA+CGG | - | chr2.3:21039369-21039388 | MS.gene060219:intron | 30.0% | |
| ATCAAATGAAGCAAAAAGGT+AGG | - | chr2.3:21035282-21035301 | MS.gene060219:intron | 30.0% | |
| ATTGACCATACCAAAATGAT+GGG | + | chr2.3:21036272-21036291 | None:intergenic | 30.0% | |
| CTATTACATGTTCCAAAACT+TGG | - | chr2.3:21037110-21037129 | MS.gene060219:intron | 30.0% | |
| CTTTAGATGACAGTTTACTA+GGG | + | chr2.3:21038713-21038732 | None:intergenic | 30.0% | |
| GAAAAAATTTCATGTCACTC+TGG | - | chr2.3:21036431-21036450 | MS.gene060219:CDS | 30.0% | |
| GAGATTCAATTTCGTGAATT+AGG | + | chr2.3:21035073-21035092 | None:intergenic | 30.0% | |
| GATAAGAAAATAGCACAACA+AGG | + | chr2.3:21037363-21037382 | None:intergenic | 30.0% | |
| GGAAATTGAAGAGATTTGAT+TGG | + | chr2.3:21035137-21035156 | None:intergenic | 30.0% | |
| GTAATAGTGATAGATTGTCT+TGG | + | chr2.3:21037097-21037116 | None:intergenic | 30.0% | |
| GTGACTTCTACACTATAATA+TGG | + | chr2.3:21039075-21039094 | None:intergenic | 30.0% | |
| TAAGAAAATAGCACAACAAG+GGG | + | chr2.3:21037361-21037380 | None:intergenic | 30.0% | |
| TACAACTAAGAAAGCTGATA+CGG | - | chr2.3:21039326-21039345 | MS.gene060219:intron | 30.0% | |
| TATTAGACATGCCTTCAATT+AGG | - | chr2.3:21035872-21035891 | MS.gene060219:intron | 30.0% | |
| TCAAATGAAGCAAAAAGGTA+GGG | - | chr2.3:21035283-21035302 | MS.gene060219:intron | 30.0% | |
| TCTTTAGATGACAGTTTACT+AGG | + | chr2.3:21038714-21038733 | None:intergenic | 30.0% | |
| TCTTTCATGTGACCAAAAAA+TGG | - | chr2.3:21037155-21037174 | MS.gene060219:intron | 30.0% | |
| TGAAAGAAACATTATTAGGG+AGG | + | chr2.3:21037142-21037161 | None:intergenic | 30.0% | |
| TGAACAACATTACTCTTTGT+TGG | + | chr2.3:21038077-21038096 | None:intergenic | 30.0% | |
| TGAGTTTATGCTTGTTTGTT+TGG | - | chr2.3:21036078-21036097 | MS.gene060219:CDS | 30.0% | |
| TGTCAGTGTTGTATTATTGT+CGG | - | chr2.3:21035848-21035867 | MS.gene060219:intron | 30.0% | |
| TTCATGTCATGGTTTCATAT+AGG | + | chr2.3:21036229-21036248 | None:intergenic | 30.0% | |
| TTGTTGAAAAACATGAGGAT+GGG | - | chr2.3:21035444-21035463 | MS.gene060219:intron | 30.0% | |
| TTTAAGTGTCAGTGCTATAT+AGG | - | chr2.3:21035727-21035746 | MS.gene060219:CDS | 30.0% | |
| TTTCTGTGAATTGCTTTAGT+AGG | - | chr2.3:21036986-21037005 | MS.gene060219:CDS | 30.0% | |
| TTTGTTGAAAAACATGAGGA+TGG | - | chr2.3:21035443-21035462 | MS.gene060219:intron | 30.0% | |
| ! | AAATCAGATTGAAAGTACAG+TGG | + | chr2.3:21039716-21039735 | None:intergenic | 30.0% |
| ! | AATCAGATTGAAAGTACAGT+GGG | + | chr2.3:21039715-21039734 | None:intergenic | 30.0% |
| ! | AGAAATTAAACCGTTGGTTA+AGG | - | chr2.3:21038794-21038813 | MS.gene060219:intron | 30.0% |
| ! | ATCATGTTACTATTTTCCTC+TGG | + | chr2.3:21038371-21038390 | None:intergenic | 30.0% |
| ! | CTTTTGTACAAAGGGTAAAA+AGG | - | chr2.3:21037988-21038007 | MS.gene060219:intron | 30.0% |
| ! | GAATTGTGTGCTATGTTTTT+AGG | + | chr2.3:21038107-21038126 | None:intergenic | 30.0% |
| ! | TTTTGTAGCCAGAAAAAAAG+TGG | - | chr2.3:21037659-21037678 | MS.gene060219:intron | 30.0% |
| !! | AATTTCAGGTTTCATACAAG+TGG | - | chr2.3:21035236-21035255 | MS.gene060219:intron | 30.0% |
| !! | ACACTGATTCAGAAGTTTAT+TGG | + | chr2.3:21037621-21037640 | None:intergenic | 30.0% |
| !! | ACTAATATCATGACTTGCTT+GGG | + | chr2.3:21036792-21036811 | None:intergenic | 30.0% |
| !! | AGGCTTTGAAATTGAAAATC+GGG | + | chr2.3:21035175-21035194 | None:intergenic | 30.0% |
| !! | GTGTTTTCTTCATAGTTTTG+TGG | - | chr2.3:21036051-21036070 | MS.gene060219:CDS | 30.0% |
| !! | TACTAATATCATGACTTGCT+TGG | + | chr2.3:21036793-21036812 | None:intergenic | 30.0% |
| !! | TGTTGCTTTGTGAAATTGAT+GGG | - | chr2.3:21035353-21035372 | MS.gene060219:intron | 30.0% |
| !! | TTGTTGCTTTGTGAAATTGA+TGG | - | chr2.3:21035352-21035371 | MS.gene060219:intron | 30.0% |
| !!! | ACAAGAGACCAGAAATTTTT+TGG | - | chr2.3:21036957-21036976 | MS.gene060219:CDS | 30.0% |
| !!! | CAAGAGACCAGAAATTTTTT+GGG | - | chr2.3:21036958-21036977 | MS.gene060219:CDS | 30.0% |
| !!! | TTTAGTTTTCTGCAGTTGAT+GGG | - | chr2.3:21035308-21035327 | MS.gene060219:intron | 30.0% |
| !!! | TTTTAGTTTTCTGCAGTTGA+TGG | - | chr2.3:21035307-21035326 | MS.gene060219:intron | 30.0% |
| AAACATAAAGGATCCCAAAC+AGG | - | chr2.3:21039914-21039933 | MS.gene060219:CDS | 35.0% | |
| AAAGGACAAGCTGATAAAAG+TGG | - | chr2.3:21038275-21038294 | MS.gene060219:intron | 35.0% | |
| AACATAAAGGATCCCAAACA+GGG | - | chr2.3:21039915-21039934 | MS.gene060219:CDS | 35.0% | |
| AACATGATTTCAAAACCTGC+AGG | - | chr2.3:21038383-21038402 | MS.gene060219:CDS | 35.0% | |
| AACCATGACATGAACCAATT+TGG | - | chr2.3:21036235-21036254 | MS.gene060219:CDS | 35.0% | |
| ACATCAAATACTACTGGAAG+AGG | - | chr2.3:21039873-21039892 | MS.gene060219:intron | 35.0% | |
| AGTAAAATCTGTAGTAGGCT+TGG | - | chr2.3:21038049-21038068 | MS.gene060219:intron | 35.0% | |
| ATAATTGCTTGGGAGACAAT+AGG | - | chr2.3:21036653-21036672 | MS.gene060219:CDS | 35.0% | |
| ATTAGTGTTGTAATCGCCAT+TGG | + | chr2.3:21036921-21036940 | None:intergenic | 35.0% | |
| ATTTGTCAGTTCAGTATGAG+TGG | + | chr2.3:21036878-21036897 | None:intergenic | 35.0% | |
| CAAGAAAGCAGGAAACATAA+AGG | - | chr2.3:21039902-21039921 | MS.gene060219:intron | 35.0% | |
| CAATTTCGTGAATTAGGGAT+AGG | + | chr2.3:21035067-21035086 | None:intergenic | 35.0% | |
| CATATTCCAAAAGCAGAAGA+TGG | + | chr2.3:21037223-21037242 | None:intergenic | 35.0% | |
| CCAGAAGTAAAATCTGTAGT+AGG | - | chr2.3:21038044-21038063 | MS.gene060219:intron | 35.0% | |
| CCTACTTCCTAATGTTTGTA+AGG | + | chr2.3:21036461-21036480 | None:intergenic | 35.0% | |
| CCTGTACAAAAAGATGCTAA+AGG | + | chr2.3:21036177-21036196 | None:intergenic | 35.0% | |
| CCTTACAAACATTAGGAAGT+AGG | - | chr2.3:21036458-21036477 | MS.gene060219:CDS | 35.0% | |
| CTGTCTTATATGTGTCTTTG+CGG | - | chr2.3:21037907-21037926 | MS.gene060219:intron | 35.0% | |
| GAAAGAATATTGCCCTGTTT+GGG | + | chr2.3:21039930-21039949 | None:intergenic | 35.0% | |
| GAGAATCACAGTATACTTCA+AGG | + | chr2.3:21039484-21039503 | None:intergenic | 35.0% | |
| GGAAGCAATCAATACTTCAA+AGG | - | chr2.3:21039434-21039453 | MS.gene060219:intron | 35.0% | |
| GTAAAATCTGTAGTAGGCTT+GGG | - | chr2.3:21038050-21038069 | MS.gene060219:intron | 35.0% | |
| GTATCCTTGTCATCTTTCTT+TGG | + | chr2.3:21039309-21039328 | None:intergenic | 35.0% | |
| TATCTACCAAAGCTGTTAAC+GGG | - | chr2.3:21039370-21039389 | MS.gene060219:intron | 35.0% | |
| TCCAAAGCTGATAATTGCTT+GGG | - | chr2.3:21036643-21036662 | MS.gene060219:CDS | 35.0% | |
| TGAAAGAATATTGCCCTGTT+TGG | + | chr2.3:21039931-21039950 | None:intergenic | 35.0% | |
| TGAACTATGAAGGTTAGACA+CGG | - | chr2.3:21035604-21035623 | MS.gene060219:intron | 35.0% | |
| TGATCTCAAAACACAGAATG+TGG | - | chr2.3:21038139-21038158 | MS.gene060219:intron | 35.0% | |
| TGTACAGGAACTGAAGTAAT+TGG | - | chr2.3:21036189-21036208 | MS.gene060219:CDS | 35.0% | |
| TGTTATATGTAGGTTGCTTC+AGG | - | chr2.3:21035418-21035437 | MS.gene060219:intron | 35.0% | |
| TTCAGTAACTGAAGTAGTCT+GGG | - | chr2.3:21039266-21039285 | MS.gene060219:intron | 35.0% | |
| TTCCAAAGCTGATAATTGCT+TGG | - | chr2.3:21036642-21036661 | MS.gene060219:CDS | 35.0% | |
| ! | AAGAATTTTCTTTTACCGCC+AGG | - | chr2.3:21037846-21037865 | MS.gene060219:intron | 35.0% |
| ! | ACAGTGAAGTATTAAGCAGT+AGG | + | chr2.3:21035961-21035980 | None:intergenic | 35.0% |
| ! | ACCAACGGTTTAATTTCTAC+CGG | + | chr2.3:21038792-21038811 | None:intergenic | 35.0% |
| ! | AGTGATGACGATGATAATCA+AGG | - | chr2.3:21038591-21038610 | MS.gene060219:intron | 35.0% |
| ! | ATCAGATTGAAAGTACAGTG+GGG | + | chr2.3:21039714-21039733 | None:intergenic | 35.0% |
| ! | CAGTGAAGTATTAAGCAGTA+GGG | + | chr2.3:21035960-21035979 | None:intergenic | 35.0% |
| ! | CCTACTACAGATTTTACTTC+TGG | + | chr2.3:21038047-21038066 | None:intergenic | 35.0% |
| ! | CCTTTAGCATCTTTTTGTAC+AGG | - | chr2.3:21036174-21036193 | MS.gene060219:CDS | 35.0% |
| ! | GACTTTTCTTTCTCTGCAAT+AGG | + | chr2.3:21038230-21038249 | None:intergenic | 35.0% |
| ! | GATAAAAGTGGCTCTGTTAA+TGG | - | chr2.3:21038287-21038306 | MS.gene060219:intron | 35.0% |
| ! | GGCTAACTAGCATATTTTTC+AGG | - | chr2.3:21037946-21037965 | MS.gene060219:intron | 35.0% |
| ! | GTTTTTCTGACCCATCATTT+TGG | - | chr2.3:21036259-21036278 | MS.gene060219:CDS | 35.0% |
| !! | AAAGCTGCTTTGAAAAGTAG+GGG | - | chr2.3:21037550-21037569 | MS.gene060219:intron | 35.0% |
| !! | AGAAAGCTGCTTTGAAAAGT+AGG | - | chr2.3:21037548-21037567 | MS.gene060219:intron | 35.0% |
| !! | CTAATATCATGACTTGCTTG+GGG | + | chr2.3:21036791-21036810 | None:intergenic | 35.0% |
| !! | CTGATAAATCTTTTGGTGGT+TGG | + | chr2.3:21038848-21038867 | None:intergenic | 35.0% |
| !! | GAAAGCTGCTTTGAAAAGTA+GGG | - | chr2.3:21037549-21037568 | MS.gene060219:intron | 35.0% |
| !! | GCTTTGAAATTGAAAATCGG+GGG | + | chr2.3:21035173-21035192 | None:intergenic | 35.0% |
| !! | GGAGTTTGTTGAAAAACATG+AGG | - | chr2.3:21035439-21035458 | MS.gene060219:intron | 35.0% |
| !! | GGCTTTGAAATTGAAAATCG+GGG | + | chr2.3:21035174-21035193 | None:intergenic | 35.0% |
| !! | TAAATGTCTTGGTGTCGTAT+TGG | - | chr2.3:21035678-21035697 | MS.gene060219:CDS | 35.0% |
| !! | TAATATCATGACTTGCTTGG+GGG | + | chr2.3:21036790-21036809 | None:intergenic | 35.0% |
| !! | TACAGATTTTACTTCTGGAG+TGG | + | chr2.3:21038042-21038061 | None:intergenic | 35.0% |
| !! | TCTTTCCATTGCTTTTGTGT+GGG | - | chr2.3:21037305-21037324 | MS.gene060219:intron | 35.0% |
| !! | TTCATCACTTTTCTCCTCTT+AGG | + | chr2.3:21038981-21039000 | None:intergenic | 35.0% |
| !!! | ACTGACACTGAACCATTTTT+TGG | + | chr2.3:21037170-21037189 | None:intergenic | 35.0% |
| !!! | AGCATATTTTTCAGGTTCTG+TGG | - | chr2.3:21037954-21037973 | MS.gene060219:intron | 35.0% |
| !!! | CATTTTTTATGCAGAAGCAC+AGG | - | chr2.3:21036501-21036520 | MS.gene060219:intron | 35.0% |
| !!! | GCATATTTTTCAGGTTCTGT+GGG | - | chr2.3:21037955-21037974 | MS.gene060219:intron | 35.0% |
| !!! | TCAAACCACCACTTTTTTTC+TGG | + | chr2.3:21037670-21037689 | None:intergenic | 35.0% |
| !!! | TTGTGTGCTATGTTTTTAGG+AGG | + | chr2.3:21038104-21038123 | None:intergenic | 35.0% |
| !!! | TTTTTGGTTCTCTTTGCCAA+TGG | - | chr2.3:21036902-21036921 | MS.gene060219:CDS | 35.0% |
| AAATATGCTAGTTAGCCACC+AGG | + | chr2.3:21037943-21037962 | None:intergenic | 40.0% | |
| AAGACTAGGATTGATGAACG+AGG | - | chr2.3:21038999-21039018 | MS.gene060219:intron | 40.0% | |
| AAGAGTGAAAGCAATGGTAC+AGG | - | chr2.3:21038173-21038192 | MS.gene060219:intron | 40.0% | |
| AAGCACAGGAAGAGTTTGAT+GGG | - | chr2.3:21036515-21036534 | MS.gene060219:intron | 40.0% | |
| AATGTTATTGCTGGCCAAAG+TGG | + | chr2.3:21039666-21039685 | None:intergenic | 40.0% | |
| ACAAAGGGTAAAAAGGAACG+AGG | - | chr2.3:21037995-21038014 | MS.gene060219:intron | 40.0% | |
| ACCGGTAGAAATTAAACCGT+TGG | - | chr2.3:21038788-21038807 | MS.gene060219:intron | 40.0% | |
| ACTCTCTCATCCTTAACCAA+CGG | + | chr2.3:21038807-21038826 | None:intergenic | 40.0% | |
| AGAGCCAAAGAAAGATGACA+AGG | - | chr2.3:21039302-21039321 | MS.gene060219:intron | 40.0% | |
| ATCATCCAACAGGAAAAGGA+GGG | - | chr2.3:21038629-21038648 | MS.gene060219:intron | 40.0% | |
| ATTGATGAACGAGGAAGAGA+AGG | - | chr2.3:21039008-21039027 | MS.gene060219:intron | 40.0% | |
| CATCAGTTTAGCATCAGATG+AGG | - | chr2.3:21038686-21038705 | MS.gene060219:intron | 40.0% | |
| CCAGCTACATCAAATACTAC+TGG | - | chr2.3:21039867-21039886 | MS.gene060219:intron | 40.0% | |
| CCAGTAGTATTTGATGTAGC+TGG | + | chr2.3:21039870-21039889 | None:intergenic | 40.0% | |
| CCTGTTGGATGATCTTCTTA+AGG | + | chr2.3:21038622-21038641 | None:intergenic | 40.0% | |
| CCTTAAGAAGATCATCCAAC+AGG | - | chr2.3:21038619-21038638 | MS.gene060219:intron | 40.0% | |
| CGTATCAGATCAACTTCAAG+TGG | - | chr2.3:21035094-21035113 | MS.gene060219:CDS | 40.0% | |
| CTTCAGTAACTGAAGTAGTC+TGG | - | chr2.3:21039265-21039284 | MS.gene060219:intron | 40.0% | |
| GAAATTCGAGAAACCAAACC+AGG | - | chr2.3:21037191-21037210 | MS.gene060219:intron | 40.0% | |
| GAAGATCATCCAACAGGAAA+AGG | - | chr2.3:21038625-21038644 | MS.gene060219:intron | 40.0% | |
| GATGTCAAGAGTGAAAGCAA+TGG | - | chr2.3:21038167-21038186 | MS.gene060219:intron | 40.0% | |
| GCGGCAATTATGAACTATGA+AGG | - | chr2.3:21035594-21035613 | MS.gene060219:intron | 40.0% | |
| GGAGAAAAGTGATGAAGACT+AGG | - | chr2.3:21038985-21039004 | MS.gene060219:intron | 40.0% | |
| GGGTCAGAAAAACACCAAAT+TGG | + | chr2.3:21036252-21036271 | None:intergenic | 40.0% | |
| GTAGTATTTGATGTAGCTGG+TGG | + | chr2.3:21039867-21039886 | None:intergenic | 40.0% | |
| GTATTCCTAGCTACCATGTA+AGG | - | chr2.3:21035507-21035526 | MS.gene060219:intron | 40.0% | |
| GTGAATTAGGGATAGGGTTT+CGG | + | chr2.3:21035060-21035079 | None:intergenic | 40.0% | |
| GTGCTCTATCATTCCAATAG+TGG | + | chr2.3:21037250-21037269 | None:intergenic | 40.0% | |
| TCAAATACTACTGGAAGAGG+AGG | - | chr2.3:21039876-21039895 | MS.gene060219:intron | 40.0% | |
| TCCCAAGCAATTATCAGCTT+TGG | + | chr2.3:21036647-21036666 | None:intergenic | 40.0% | |
| TGAAAAACATGAGGATGGGT+TGG | - | chr2.3:21035448-21035467 | MS.gene060219:intron | 40.0% | |
| TGAAACCCACACAAAAGCAA+TGG | + | chr2.3:21037313-21037332 | None:intergenic | 40.0% | |
| TGATTTCAAAACCTGCAGGT+TGG | - | chr2.3:21038387-21038406 | MS.gene060219:CDS | 40.0% | |
| TGCTTCATGAGCACAAGTTT+GGG | + | chr2.3:21038559-21038578 | None:intergenic | 40.0% | |
| TGGAATATGCTCTCCACTAT+TGG | - | chr2.3:21037234-21037253 | MS.gene060219:intron | 40.0% | |
| TGTAGCCAGAAAAAAAGTGG+TGG | - | chr2.3:21037662-21037681 | MS.gene060219:intron | 40.0% | |
| TGTCAGTGCTATATAGGTAC+CGG | - | chr2.3:21035733-21035752 | MS.gene060219:intron | 40.0% | |
| TGTGCAAGCTAGTATTCCAA+AGG | - | chr2.3:21036561-21036580 | MS.gene060219:intron | 40.0% | |
| TTCCAAAAGCAGAAGATGGA+AGG | + | chr2.3:21037219-21037238 | None:intergenic | 40.0% | |
| ! | AAAAGTGGCTCTGTTAATGG+AGG | - | chr2.3:21038290-21038309 | MS.gene060219:intron | 40.0% |
| ! | ATCCTTCCATCTTCTGCTTT+TGG | - | chr2.3:21037214-21037233 | MS.gene060219:intron | 40.0% |
| ! | ATGCCTTCAATTAGGAGTGT+TGG | - | chr2.3:21035880-21035899 | MS.gene060219:intron | 40.0% |
| ! | CACCAAATTGGTTCATGTCA+TGG | + | chr2.3:21036240-21036259 | None:intergenic | 40.0% |
| ! | GGGAGGAAAAAACCAAGTTT+TGG | + | chr2.3:21037125-21037144 | None:intergenic | 40.0% |
| ! | GGTTTGAGTGTCAAGCTTTT+GGG | - | chr2.3:21036099-21036118 | MS.gene060219:CDS | 40.0% |
| ! | GTTTGAGTGTCAAGCTTTTG+GGG | - | chr2.3:21036100-21036119 | MS.gene060219:CDS | 40.0% |
| ! | TAGCTTGCACACTATATACC+TGG | + | chr2.3:21036552-21036571 | None:intergenic | 40.0% |
| ! | TGGAGTGCCTTACAAACATT+AGG | - | chr2.3:21036451-21036470 | MS.gene060219:CDS | 40.0% |
| ! | TGGTTTGAGTGTCAAGCTTT+TGG | - | chr2.3:21036098-21036117 | MS.gene060219:CDS | 40.0% |
| ! | TTGTCCTTTCTTTTTGCCTG+CGG | + | chr2.3:21038264-21038283 | None:intergenic | 40.0% |
| !! | ACCATGTAAGGCTTGTTACT+GGG | - | chr2.3:21035519-21035538 | MS.gene060219:intron | 40.0% |
| !! | ATTGCTTTTGTGTGGGTTTC+AGG | - | chr2.3:21037312-21037331 | MS.gene060219:intron | 40.0% |
| !! | GTCGTATTGGTGTCAGATAT+CGG | - | chr2.3:21035691-21035710 | MS.gene060219:CDS | 40.0% |
| !! | GTCTTTCCATTGCTTTTGTG+TGG | - | chr2.3:21037304-21037323 | MS.gene060219:intron | 40.0% |
| !! | TACCATGTAAGGCTTGTTAC+TGG | - | chr2.3:21035518-21035537 | MS.gene060219:intron | 40.0% |
| !! | TCGTATTGGTGTCAGATATC+GGG | - | chr2.3:21035692-21035711 | MS.gene060219:CDS | 40.0% |
| !! | TCTGACCCATCATTTTGGTA+TGG | - | chr2.3:21036264-21036283 | MS.gene060219:CDS | 40.0% |
| !!! | GTGCTATGTTTTTAGGAGGT+TGG | + | chr2.3:21038100-21038119 | None:intergenic | 40.0% |
| AAATCGGGGGAAGAGAAGTA+AGG | + | chr2.3:21035160-21035179 | None:intergenic | 45.0% | |
| AAGATGGAAGGATCCTGGTT+TGG | + | chr2.3:21037207-21037226 | None:intergenic | 45.0% | |
| AATCGGGGGAAGAGAAGTAA+GGG | + | chr2.3:21035159-21035178 | None:intergenic | 45.0% | |
| AATGTGTGATGCATCTCTCC+AGG | - | chr2.3:21037492-21037511 | MS.gene060219:intron | 45.0% | |
| ACAAGCCTTACATGGTAGCT+AGG | + | chr2.3:21035515-21035534 | None:intergenic | 45.0% | |
| ACTTCAAGGGACACCTAACA+AGG | + | chr2.3:21039470-21039489 | None:intergenic | 45.0% | |
| AGCAATGGTACAGGAAATGC+AGG | - | chr2.3:21038182-21038201 | MS.gene060219:intron | 45.0% | |
| AGGGTAAAAAGGAACGAGGA+TGG | - | chr2.3:21037999-21038018 | MS.gene060219:intron | 45.0% | |
| AGTAACTGAAGTAGTCTGGG+AGG | - | chr2.3:21039269-21039288 | MS.gene060219:intron | 45.0% | |
| AGTGCAAAAAAGGTCTCTCC+AGG | - | chr2.3:21038951-21038970 | MS.gene060219:intron | 45.0% | |
| ATCACCAAGTGCACAAGTAC+TGG | - | chr2.3:21038870-21038889 | MS.gene060219:intron | 45.0% | |
| ATGAGTGGCATCAAATCTGC+TGG | + | chr2.3:21036863-21036882 | None:intergenic | 45.0% | |
| CGTTGTGCAATTACATGTCC+TGG | + | chr2.3:21037513-21037532 | None:intergenic | 45.0% | |
| CTAGTTAGCCACCAGGAATT+AGG | + | chr2.3:21037936-21037955 | None:intergenic | 45.0% | |
| CTCTGCAACTTCTCAGTAGA+TGG | + | chr2.3:21038900-21038919 | None:intergenic | 45.0% | |
| CTCTGTTAATGGAGGTTCGT+TGG | - | chr2.3:21038298-21038317 | MS.gene060219:intron | 45.0% | |
| CTGCTTCATGAGCACAAGTT+TGG | + | chr2.3:21038560-21038579 | None:intergenic | 45.0% | |
| CTTTGCGGTTTCCTAATTCC+TGG | - | chr2.3:21037922-21037941 | MS.gene060219:intron | 45.0% | |
| GAAGCACAGGAAGAGTTTGA+TGG | - | chr2.3:21036514-21036533 | MS.gene060219:intron | 45.0% | |
| GAAGTGGTGTATGCTTTGTC+TGG | - | chr2.3:21035470-21035489 | MS.gene060219:intron | 45.0% | |
| GATCATCCAACAGGAAAAGG+AGG | - | chr2.3:21038628-21038647 | MS.gene060219:intron | 45.0% | |
| GCACCAACACTCCTAATTGA+AGG | + | chr2.3:21035886-21035905 | None:intergenic | 45.0% | |
| GTAACTGAAGTAGTCTGGGA+GGG | - | chr2.3:21039270-21039289 | MS.gene060219:intron | 45.0% | |
| GTGTGTCTGTTTGACATGTC+CGG | + | chr2.3:21035755-21035774 | None:intergenic | 45.0% | |
| TAACTGAAGTAGTCTGGGAG+GGG | - | chr2.3:21039271-21039290 | MS.gene060219:intron | 45.0% | |
| TACTAGCCGATTGTCCACTT+TGG | - | chr2.3:21039649-21039668 | MS.gene060219:intron | 45.0% | |
| TCACCAAGTGCACAAGTACT+GGG | - | chr2.3:21038871-21038890 | MS.gene060219:intron | 45.0% | |
| TCCCAGTAACAAGCCTTACA+TGG | + | chr2.3:21035523-21035542 | None:intergenic | 45.0% | |
| TGTGCTCATGAAGCAGTACT+GGG | - | chr2.3:21038564-21038583 | MS.gene060219:intron | 45.0% | |
| TTGCTTGGGAGACAATAGGT+AGG | - | chr2.3:21036657-21036676 | MS.gene060219:CDS | 45.0% | |
| TTGTGCTCATGAAGCAGTAC+TGG | - | chr2.3:21038563-21038582 | MS.gene060219:intron | 45.0% | |
| TTTCCCAGTACTTGTGCACT+TGG | + | chr2.3:21038877-21038896 | None:intergenic | 45.0% | |
| TTTCTCCTCTTAGGTGAACC+TGG | + | chr2.3:21038972-21038991 | None:intergenic | 45.0% | |
| ! | TACCAAAGCTGTTAACGGGT+TGG | - | chr2.3:21039374-21039393 | MS.gene060219:intron | 45.0% |
| ! | TGTCCTTTCTTTTTGCCTGC+GGG | + | chr2.3:21038263-21038282 | None:intergenic | 45.0% |
| !! | CAGTGTCGATGTATCAGTGT+CGG | + | chr2.3:21035645-21035664 | None:intergenic | 45.0% |
| !!! | CAAGGCTTGGGTTTTGAAGA+TGG | + | chr2.3:21038341-21038360 | None:intergenic | 45.0% |
| !! | TAATTATTGAATATATATTA+CGG | + | chr2.3:21037026-21037045 | None:intergenic | 5.0% |
| !!! | GAATTTTTTTTTTTTTTTTT+TGG | - | chr2.3:21037572-21037591 | MS.gene060219:intron | 5.0% |
| AACTGAAGTAGTCTGGGAGG+GGG | - | chr2.3:21039272-21039291 | MS.gene060219:intron | 50.0% | |
| AAGGAACGAGGATGGACAAC+CGG | - | chr2.3:21038007-21038026 | MS.gene060219:intron | 50.0% | |
| AGAGGAGGAAGCAAGAAAGC+AGG | - | chr2.3:21039891-21039910 | MS.gene060219:intron | 50.0% | |
| AGAGTTCAAGACTGAGCACC+TGG | + | chr2.3:21037867-21037886 | None:intergenic | 50.0% | |
| AGCAGAAGATGGAAGGATCC+TGG | + | chr2.3:21037212-21037231 | None:intergenic | 50.0% | |
| AGGCTGCATGACTCCTTGTT+AGG | - | chr2.3:21039454-21039473 | MS.gene060219:intron | 50.0% | |
| AGGTTCGTTGGCAAGCTTCT+GGG | - | chr2.3:21038310-21038329 | MS.gene060219:intron | 50.0% | |
| ATCGGGGGAAGAGAAGTAAG+GGG | + | chr2.3:21035158-21035177 | None:intergenic | 50.0% | |
| CAAAGCACAGCTGCATCCTT+TGG | + | chr2.3:21036580-21036599 | None:intergenic | 50.0% | |
| CAAAGGATGCAGCTGTGCTT+TGG | - | chr2.3:21036578-21036597 | MS.gene060219:intron | 50.0% | |
| CACAACAAGGGGTGAGAAAG+AGG | + | chr2.3:21037350-21037369 | None:intergenic | 50.0% | |
| CACCAACCCGTTAACAGCTT+TGG | + | chr2.3:21039379-21039398 | None:intergenic | 50.0% | |
| GAAGTTGCAGAGCAATGCTC+CGG | - | chr2.3:21038908-21038927 | MS.gene060219:intron | 50.0% | |
| GTTACTGGGACAATGCTTGC+AGG | - | chr2.3:21035533-21035552 | MS.gene060219:intron | 50.0% | |
| TCATTGCATTTCCAGCGCAC+CGG | - | chr2.3:21039830-21039849 | MS.gene060219:intron | 50.0% | |
| TCTCTCCAGGTTCACCTAAG+AGG | - | chr2.3:21038964-21038983 | MS.gene060219:intron | 50.0% | |
| TGATGGGAAATGCTCAGTCC+AGG | - | chr2.3:21036531-21036550 | MS.gene060219:intron | 50.0% | |
| TGCGGTTTCCTAATTCCTGG+TGG | - | chr2.3:21037925-21037944 | MS.gene060219:intron | 50.0% | |
| TGCTGGCCAAAGTGGACAAT+CGG | + | chr2.3:21039658-21039677 | None:intergenic | 50.0% | |
| TGGTGTATGCTTTGTCTGGC+TGG | - | chr2.3:21035474-21035493 | MS.gene060219:intron | 50.0% | |
| TTGCCCGCAGGCAAAAAGAA+AGG | - | chr2.3:21038257-21038276 | MS.gene060219:intron | 50.0% | |
| ! | GACAACCCTCCTTTTCCTGT+TGG | + | chr2.3:21038637-21038656 | None:intergenic | 50.0% |
| ! | TTCTTTTTGCCTGCGGGCAA+GGG | + | chr2.3:21038257-21038276 | None:intergenic | 50.0% |
| ! | TTTCTTTTTGCCTGCGGGCA+AGG | + | chr2.3:21038258-21038277 | None:intergenic | 50.0% |
| !! | ACATGAGGATGGGTTGGAAG+TGG | - | chr2.3:21035454-21035473 | MS.gene060219:intron | 50.0% |
| !! | CTGCAGGTTGGTTTCCATTC+CGG | - | chr2.3:21038399-21038418 | MS.gene060219:CDS | 50.0% |
| !! | TTAGGAGTGTTGGTGCTGCA+TGG | - | chr2.3:21035890-21035909 | MS.gene060219:intron | 50.0% |
| !!! | AGTGTCAAGCTTTTGGGGTC+AGG | - | chr2.3:21036105-21036124 | MS.gene060219:CDS | 50.0% |
| CGGAATGGAAACCAACCTGC+AGG | + | chr2.3:21038401-21038420 | None:intergenic | 55.0% | |
| GAGGTTCGTTGGCAAGCTTC+TGG | - | chr2.3:21038309-21038328 | MS.gene060219:intron | 55.0% | |
| GCTGGTGGCTTCTTAGTTGC+CGG | + | chr2.3:21039852-21039871 | None:intergenic | 55.0% | |
| GGTTCGTTGGCAAGCTTCTG+GGG | - | chr2.3:21038311-21038330 | MS.gene060219:intron | 55.0% | |
| GTTCAAGACTGAGCACCTGG+CGG | + | chr2.3:21037864-21037883 | None:intergenic | 55.0% | |
| ! | TCTGGAGTGGCAGAAACTGC+CGG | + | chr2.3:21038029-21038048 | None:intergenic | 55.0% |
| ! | TTTTCCTCTGGCACAGCGCA+AGG | + | chr2.3:21038359-21038378 | None:intergenic | 55.0% |
| !! | TGTGTGGGTTTCAGGTTCGC+TGG | - | chr2.3:21037320-21037339 | MS.gene060219:intron | 55.0% |
| AAGTCTCTTCCCTTGCCCGC+AGG | - | chr2.3:21038245-21038264 | MS.gene060219:intron | 60.0% | |
| CTTCTTAGTTGCCGGTGCGC+TGG | + | chr2.3:21039844-21039863 | None:intergenic | 60.0% | |
| TCTGGCACAGCGCAAGGCTT+GGG | + | chr2.3:21038353-21038372 | None:intergenic | 60.0% | |
| TGAAGTAGTCTGGGAGGGGG+AGG | - | chr2.3:21039275-21039294 | MS.gene060219:intron | 60.0% | |
| CAAGCCTTGCGCTGTGCCAG+AGG | - | chr2.3:21038352-21038371 | MS.gene060219:CDS | 65.0% | |
| CTCTGGCACAGCGCAAGGCT+TGG | + | chr2.3:21038354-21038373 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 21035047 | 21039971 | 21035047 | ID=MS.gene060219 |
| chr2.3 | mRNA | 21035047 | 21039971 | 21035047 | ID=MS.gene060219.t1;Parent=MS.gene060219 |
| chr2.3 | exon | 21039903 | 21039971 | 21039903 | ID=MS.gene060219.t1.exon1;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21039903 | 21039971 | 21039903 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| chr2.3 | exon | 21039719 | 21039774 | 21039719 | ID=MS.gene060219.t1.exon2;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21039719 | 21039774 | 21039719 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| chr2.3 | exon | 21039464 | 21039588 | 21039464 | ID=MS.gene060219.t1.exon3;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21039464 | 21039588 | 21039464 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| chr2.3 | exon | 21038344 | 21038503 | 21038344 | ID=MS.gene060219.t1.exon4;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21038344 | 21038503 | 21038344 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| chr2.3 | exon | 21036614 | 21037050 | 21036614 | ID=MS.gene060219.t1.exon5;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21036614 | 21037050 | 21036614 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| chr2.3 | exon | 21035989 | 21036477 | 21035989 | ID=MS.gene060219.t1.exon6;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21035989 | 21036477 | 21035989 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| chr2.3 | exon | 21035627 | 21035747 | 21035627 | ID=MS.gene060219.t1.exon7;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21035627 | 21035747 | 21035627 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| chr2.3 | exon | 21035047 | 21035173 | 21035047 | ID=MS.gene060219.t1.exon8;Parent=MS.gene060219.t1 |
| chr2.3 | CDS | 21035047 | 21035173 | 21035047 | ID=cds.MS.gene060219.t1;Parent=MS.gene060219.t1 |
| Gene Sequence |
| Protein sequence |
