AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63395


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63395.t1 MTR_2g075820 94.757 534 20 2 1 534 1 526 0.0 1021
MS.gene63395.t1 MTR_2g075820 93.633 534 27 1 1 534 1 527 0.0 999
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63395.t1 AT1G78650 43.898 549 250 13 1 532 1 508 1.47e-116 354

Find 111 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGATTCGATTTCGTGAATT+AGG 0.080211 2.4:+21592297 None:intergenic
GAGGTTCGTTGGCAAGCTTC+TGG 0.168208 2.4:-21589038 MS.gene63395:CDS
TCCTTATTTATACAAATTTC+CGG 0.231434 2.4:+21588420 None:intergenic
GTATCCTTGTCATCTTTCTT+TGG 0.236749 2.4:+21588041 None:intergenic
TCCGGAAATTTGTATAAATA+AGG 0.285503 2.4:-21588421 MS.gene63395:CDS
TGAAAGAATATTGCCCTGTT+TGG 0.290751 2.4:+21587397 None:intergenic
GATAAAAGTGGCTCTGTTAA+TGG 0.294110 2.4:-21589060 MS.gene63395:CDS
CTCTGCAACTTCTCAGTAGA+TGG 0.294392 2.4:+21588450 None:intergenic
CTCTGGCACAGCGCAAGGCT+TGG 0.297572 2.4:+21588996 None:intergenic
CTGCTTCATGAGCACAAGTT+TGG 0.297917 2.4:+21588790 None:intergenic
TGTTATATGTAGGTTGCTTC+AGG 0.309652 2.4:-21591943 MS.gene63395:intron
GTGATAACTGATAAATCTTT+TGG 0.315080 2.4:+21588495 None:intergenic
GTGAATTAGGGATAGGGTTT+CGG 0.334535 2.4:+21592310 None:intergenic
TCCCAAGCAATTATCAGCTT+TGG 0.343926 2.4:+21590704 None:intergenic
AGATTCGATTTCGTGAATTA+GGG 0.347776 2.4:+21592298 None:intergenic
TCTTTAGATGACAGTTTACT+AGG 0.350822 2.4:+21588636 None:intergenic
TACCATGTAAGGCTTGTTAC+TGG 0.354891 2.4:-21591843 MS.gene63395:CDS
CAAAGCACAGCTGCATCCTT+TGG 0.355427 2.4:+21590771 None:intergenic
CTTCAGTAACTGAAGTAGTC+TGG 0.361033 2.4:-21588082 MS.gene63395:intron
TATCATCAAATGAAGCAAAA+AGG 0.364120 2.4:-21592083 MS.gene63395:intron
AGAAATTAAACCGTTGGTTA+AGG 0.364213 2.4:-21588553 MS.gene63395:CDS
CACTAACCCGTTAACAGCTT+TGG 0.369733 2.4:+21587950 None:intergenic
GAAAGAATATTGCCCTGTTT+GGG 0.370990 2.4:+21587398 None:intergenic
TGGTGTATGCTTTGTCTGGC+TGG 0.371747 2.4:-21591887 MS.gene63395:CDS
TCTGGCACAGCGCAAGGCTT+GGG 0.374959 2.4:+21588997 None:intergenic
ATCACCAAGTGCACAAGTAC+TGG 0.382003 2.4:-21588477 MS.gene63395:CDS
GTTACTGGGACAATGCTTGC+AGG 0.384169 2.4:-21591828 MS.gene63395:intron
AGGTTCGTTGGCAAGCTTCT+GGG 0.384533 2.4:-21589037 MS.gene63395:CDS
CAAAGGATGCAGCTGTGCTT+TGG 0.395728 2.4:-21590770 MS.gene63395:CDS
AAACATAAAGGATCCCAAAC+AGG 0.405833 2.4:-21587411 MS.gene63395:CDS
TGCTTCATGAGCACAAGTTT+GGG 0.407375 2.4:+21588791 None:intergenic
TGAACAACATTACTCTTTGT+TGG 0.409982 2.4:+21589273 None:intergenic
GCTGGTGGCTTCTTAGTTGC+CGG 0.417944 2.4:+21587476 None:intergenic
TTCCAAAGCTGATAATTGCT+TGG 0.418548 2.4:-21590706 MS.gene63395:CDS
GAAGTGGTGTATGCTTTGTC+TGG 0.418622 2.4:-21591891 MS.gene63395:CDS
CCTGTTGGATGATCTTCTTA+AGG 0.423040 2.4:+21588728 None:intergenic
TCCAAAGCTGATAATTGCTT+GGG 0.428396 2.4:-21590705 MS.gene63395:CDS
AGTAAAATCTGTAGTAGGCT+TGG 0.430762 2.4:-21589298 MS.gene63395:CDS
CCAGTAGTATTTGATGTAGC+TGG 0.432970 2.4:+21587458 None:intergenic
CGATTTCGTGAATTAGGGAT+AGG 0.433982 2.4:+21592303 None:intergenic
ATATCTACCAAAGCTGTTAA+CGG 0.434286 2.4:-21587957 MS.gene63395:CDS
TTGTGCTCATGAAGCAGTAC+TGG 0.437428 2.4:-21588784 MS.gene63395:CDS
TATCTACCAAAGCTGTTAAC+GGG 0.445062 2.4:-21587956 MS.gene63395:intron
GTAAAATCTGTAGTAGGCTT+GGG 0.450654 2.4:-21589297 MS.gene63395:CDS
GAAGATCATCCAACAGGAAA+AGG 0.454467 2.4:-21588722 MS.gene63395:CDS
ATAATTGCTTGGGAGACAAT+AGG 0.464445 2.4:-21590695 MS.gene63395:intron
CCAGAAGTAAAATCTGTAGT+AGG 0.467548 2.4:-21589303 MS.gene63395:CDS
CAAGAAAGCAGGAAACATAA+AGG 0.467823 2.4:-21587423 MS.gene63395:CDS
AAATAAGGATAGTGCAGAAA+AGG 0.468660 2.4:-21588406 MS.gene63395:CDS
GTATTCCTAGCTACCATGTA+AGG 0.471927 2.4:-21591854 MS.gene63395:CDS
AAGGAACGAGGATGGACAAC+CGG 0.480561 2.4:-21589340 MS.gene63395:CDS
TTTCTCCTCTTAGGTGAACC+TGG 0.487423 2.4:+21588378 None:intergenic
CCAGCTACATCAAATACTAC+TGG 0.487443 2.4:-21587458 MS.gene63395:CDS
GGAGAAAAGTGATGAAGACT+AGG 0.493998 2.4:-21588362 MS.gene63395:CDS
CTCTGTTAATGGAGGTTCGT+TGG 0.494085 2.4:-21589049 MS.gene63395:CDS
CCTTAAGAAGATCATCCAAC+AGG 0.498177 2.4:-21588728 MS.gene63395:CDS
GAAGCACAGGAAGAGTTTGA+TGG 0.504579 2.4:-21590834 MS.gene63395:CDS
TTCAGTAACTGAAGTAGTCT+GGG 0.507974 2.4:-21588081 MS.gene63395:intron
TTTCCCAGTACTTGTGCACT+TGG 0.512191 2.4:+21588473 None:intergenic
ACCGGTAGAAATTAAACCGT+TGG 0.513407 2.4:-21588559 MS.gene63395:CDS
TCTCTCCAGGTTCACCTAAG+AGG 0.514966 2.4:-21588383 MS.gene63395:CDS
AGCAATGGTACAGGAAATGC+AGG 0.517649 2.4:-21589165 MS.gene63395:CDS
ACCAACGGTTTAATTTCTAC+CGG 0.517859 2.4:+21588558 None:intergenic
AACATGATTTCAAAACCTGC+AGG 0.524551 2.4:-21588964 MS.gene63395:intron
AGAGGAGGAAGCAAGAAAGC+AGG 0.527546 2.4:-21587434 MS.gene63395:CDS
GATTTCGTGAATTAGGGATA+GGG 0.531861 2.4:+21592304 None:intergenic
TCATTGCATTTCCAGCGCAC+CGG 0.539369 2.4:-21587495 MS.gene63395:intron
GGTTCGTTGGCAAGCTTCTG+GGG 0.540265 2.4:-21589036 MS.gene63395:CDS
ACAAGCCTTACATGGTAGCT+AGG 0.543674 2.4:+21591849 None:intergenic
AGGGTTTCGGTGTTCGACAT+CGG 0.547592 2.4:+21592323 None:intergenic
TCTGGAGTGGCAGAAACTGC+CGG 0.547602 2.4:+21589321 None:intergenic
AATTTCAGGTTTCATACAAG+TGG 0.549313 2.4:-21592125 MS.gene63395:intron
AAGAGTGAAAGCAATGGTAC+AGG 0.550651 2.4:-21589174 MS.gene63395:CDS
AGTGCAGAAAAGGTCTCTCC+AGG 0.552042 2.4:-21588396 MS.gene63395:CDS
ACATCAAATACTACTGGAAG+AGG 0.555136 2.4:-21587452 MS.gene63395:CDS
AAGTCTCTTCCCTTGCCCGC+AGG 0.555927 2.4:-21589102 MS.gene63395:CDS
TAACTGAAGTAGTCTGGGAG+GGG 0.560193 2.4:-21588076 MS.gene63395:CDS
CAAGCCTTGCGCTGTGCCAG+AGG 0.561439 2.4:-21588995 MS.gene63395:CDS
CGTCTCAGATCAACTTCAAG+TGG 0.561762 2.4:-21592273 MS.gene63395:intron
CTTTAGATGACAGTTTACTA+GGG 0.562262 2.4:+21588637 None:intergenic
ACCATGTAAGGCTTGTTACT+GGG 0.562390 2.4:-21591842 MS.gene63395:CDS
AAGCACAGGAAGAGTTTGAT+GGG 0.563128 2.4:-21590833 MS.gene63395:CDS
TGATCTCAAAACACAGAATG+TGG 0.563793 2.4:-21589208 MS.gene63395:CDS
TACAACTAAGAAAGCTGATA+CGG 0.567031 2.4:-21588021 MS.gene63395:CDS
TCCCAGTAACAAGCCTTACA+TGG 0.567820 2.4:+21591841 None:intergenic
TAGCTTGCACACTATATACC+TGG 0.568621 2.4:+21590799 None:intergenic
TGATGGGAAATGCTCAGTCC+AGG 0.568705 2.4:-21590817 MS.gene63395:CDS
GAAGTTGCAGAGCAATGCTC+CGG 0.570583 2.4:-21588439 MS.gene63395:CDS
TCACCAAGTGCACAAGTACT+GGG 0.574444 2.4:-21588476 MS.gene63395:CDS
AACTGAAGTAGTCTGGGAGG+GGG 0.575395 2.4:-21588075 MS.gene63395:CDS
GATCATCCAACAGGAAAAGG+AGG 0.581341 2.4:-21588719 MS.gene63395:CDS
GTAGTATTTGATGTAGCTGG+TGG 0.582098 2.4:+21587461 None:intergenic
ACATGAGGATGGGTTGGAAG+TGG 0.582631 2.4:-21591907 MS.gene63395:CDS
AAAGGACAAGCTGATAAAAG+TGG 0.583030 2.4:-21589072 MS.gene63395:CDS
GGTTGCAAAGAAAGCTGATA+CGG 0.587765 2.4:-21588000 MS.gene63395:CDS
ATTGATGAACGAGGAAGAGA+AGG 0.588930 2.4:-21588339 MS.gene63395:intron
GTAACTGAAGTAGTCTGGGA+GGG 0.592954 2.4:-21588077 MS.gene63395:CDS
AACATAAAGGATCCCAAACA+GGG 0.599044 2.4:-21587410 MS.gene63395:CDS
ACTCTCTCATCCTTAACCAA+CGG 0.611531 2.4:+21588543 None:intergenic
TCAAATACTACTGGAAGAGG+AGG 0.613938 2.4:-21587449 MS.gene63395:CDS
TGTGCTCATGAAGCAGTACT+GGG 0.619552 2.4:-21588783 MS.gene63395:CDS
TGTGCAAGCTAGTATTCCAA+AGG 0.641371 2.4:-21590787 MS.gene63395:CDS
AAAAGTGGCTCTGTTAATGG+AGG 0.643109 2.4:-21589057 MS.gene63395:CDS
AGAGCCAAAGAAAGATGACA+AGG 0.649680 2.4:-21588045 MS.gene63395:CDS
ATCATCCAACAGGAAAAGGA+GGG 0.654162 2.4:-21588718 MS.gene63395:CDS
AGTGATGACGATGATAATCA+AGG 0.657684 2.4:-21588756 MS.gene63395:CDS
GATGTCAAGAGTGAAAGCAA+TGG 0.672437 2.4:-21589180 MS.gene63395:CDS
CATCAGTTTAGCATCAGATG+AGG 0.673654 2.4:-21588661 MS.gene63395:CDS
TGATACGGTTGCAAAGAAAG+CGG 0.688933 2.4:-21587985 MS.gene63395:CDS
AGTAACTGAAGTAGTCTGGG+AGG 0.694022 2.4:-21588078 MS.gene63395:CDS
AAGACTAGGATTGATGAACG+AGG 0.746915 2.4:-21588348 MS.gene63395:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATATTCAATAAAC+CGG + chr2.4:21590770-21590789 None:intergenic 10.0%
!!! AAATATTAGATTGATTATTT+TGG + chr2.4:21590085-21590104 None:intergenic 10.0%
!!! GATATAATATAATATGATTT+TGG - chr2.4:21589776-21589795 MS.gene63395:intron 10.0%
!! ATGTTCAGTTAAAAAAAAAT+TGG - chr2.4:21588732-21588751 MS.gene63395:CDS 15.0%
!! TATAATAATTATAGTTGTAG+CGG - chr2.4:21587910-21587929 MS.gene63395:intron 15.0%
!!! AACAAATTTAGGATAAAAAA+AGG + chr2.4:21587530-21587549 None:intergenic 15.0%
!!! AATTATGTCAGTAAATTTTT+TGG + chr2.4:21590859-21590878 None:intergenic 15.0%
!!! AGTATTTTAGTTTTTTGATA+AGG - chr2.4:21589053-21589072 MS.gene63395:CDS 15.0%
!!! TAATTTTTATCTCATAAACT+TGG - chr2.4:21588362-21588381 MS.gene63395:CDS 15.0%
!!! TATTAGTCTATTAGAATATA+TGG - chr2.4:21589096-21589115 MS.gene63395:CDS 15.0%
!!! TTGAAAATTTTGTTATATGT+AGG - chr2.4:21587743-21587762 MS.gene63395:intron 15.0%
!!! TTTTAATATATCATGAAATC+AGG + chr2.4:21591943-21591962 None:intergenic 15.0%
!!! TTTTTTTATGAACACTAAAT+TGG + chr2.4:21589620-21589639 None:intergenic 15.0%
!! AACTAACTCAATTTAGATTT+AGG - chr2.4:21588668-21588687 MS.gene63395:CDS 20.0%
!! AATCTAATATTTCAATCTTC+TGG - chr2.4:21590093-21590112 MS.gene63395:intron 20.0%
!! ACATGAAAGAAACATTATTA+GGG + chr2.4:21589493-21589512 None:intergenic 20.0%
!! ACTTATATATGCATGATTAT+CGG - chr2.4:21591512-21591531 MS.gene63395:intron 20.0%
!! AGTTAAAACAATGCATTTAA+GGG + chr2.4:21591385-21591404 None:intergenic 20.0%
!! CATATTATAGTCATACATAA+AGG + chr2.4:21591446-21591465 None:intergenic 20.0%
!! GGGAAAAAAATTACAATTAA+TGG + chr2.4:21588275-21588294 None:intergenic 20.0%
!! TCATGAAATCAAACAAATTT+AGG + chr2.4:21587541-21587560 None:intergenic 20.0%
!! TCTGATATTAAAATGTAGAA+TGG - chr2.4:21589754-21589773 MS.gene63395:intron 20.0%
!!! AAGTTTTAAAATGTTATTGC+TGG + chr2.4:21592045-21592064 None:intergenic 20.0%
!!! ATGAAAATTGGTTTAATTTC+AGG - chr2.4:21587557-21587576 MS.gene63395:intron 20.0%
!!! GAATTGAATGAATGAAATTT+TGG - chr2.4:21591783-21591802 MS.gene63395:intron 20.0%
!!! TCCTTATTTATACAAATTTC+CGG + chr2.4:21591279-21591298 None:intergenic 20.0%
!!! TTGTTTGATTTCATGAAAAT+TGG - chr2.4:21587545-21587564 MS.gene63395:intron 20.0%
! AACTCAATTTAGATTTAGGT+GGG - chr2.4:21588672-21588691 MS.gene63395:CDS 25.0%
! ATAAGAAAATAGCACAACAA+GGG + chr2.4:21589710-21589729 None:intergenic 25.0%
! ATAATATGGAAAAAAGAACC+TGG + chr2.4:21591410-21591429 None:intergenic 25.0%
! ATATATTCAATAAACCGGAA+TGG + chr2.4:21590765-21590784 None:intergenic 25.0%
! CACATGAAAGAAACATTATT+AGG + chr2.4:21589494-21589513 None:intergenic 25.0%
! CTTATATATGCATGATTATC+GGG - chr2.4:21591513-21591532 MS.gene63395:intron 25.0%
! CTTCATTAATGAAGTTATTG+AGG + chr2.4:21590151-21590170 None:intergenic 25.0%
! GAACTAATAGTCATACATAA+AGG + chr2.4:21591551-21591570 None:intergenic 25.0%
! GAGTTAAAACAATGCATTTA+AGG + chr2.4:21591386-21591405 None:intergenic 25.0%
! GATAATTTGAGTAAATGTCT+TGG - chr2.4:21588002-21588021 MS.gene63395:CDS 25.0%
! TAACTCAATTTAGATTTAGG+TGG - chr2.4:21588671-21588690 MS.gene63395:CDS 25.0%
! TATAACTATAATCATCGAGA+AGG + chr2.4:21590808-21590827 None:intergenic 25.0%
! TATCATCAAATGAAGCAAAA+AGG - chr2.4:21587613-21587632 MS.gene63395:intron 25.0%
! TATGAGCAATTCATGAATAT+AGG - chr2.4:21591978-21591997 MS.gene63395:intron 25.0%
! TCCGGAAATTTGTATAAATA+AGG - chr2.4:21591275-21591294 MS.gene63395:intron 25.0%
! TTGAAAACAAACATAACTGA+TGG - chr2.4:21588463-21588482 MS.gene63395:CDS 25.0%
!! ATAACTGATAAATCTTTTGG+TGG + chr2.4:21591201-21591220 None:intergenic 25.0%
!! CTCTAATTCTTTTGTACAAA+GGG - chr2.4:21590329-21590348 MS.gene63395:intron 25.0%
!! GAACTGACAAATTTTCTTTT+TGG - chr2.4:21589234-21589253 MS.gene63395:CDS 25.0%
!! GTACTTTCAATCTGATTTTA+TGG - chr2.4:21592088-21592107 MS.gene63395:CDS 25.0%
!! GTGATAACTGATAAATCTTT+TGG + chr2.4:21591204-21591223 None:intergenic 25.0%
!! TCTCTAATTCTTTTGTACAA+AGG - chr2.4:21590328-21590347 MS.gene63395:intron 25.0%
!! TGAAATTTTCGTAAAGAACT+AGG + chr2.4:21591493-21591512 None:intergenic 25.0%
!!! AAGGCTTTGAAATTGAAAAT+TGG + chr2.4:21587511-21587530 None:intergenic 25.0%
!!! AGGCTTTGAAATTGAAAATT+GGG + chr2.4:21587510-21587529 None:intergenic 25.0%
!!! ATTGATGGGTTTTTTTACTA+TGG - chr2.4:21587702-21587721 MS.gene63395:intron 25.0%
!!! GAAATTTTTTCTCAACTCAT+TGG + chr2.4:21588770-21588789 None:intergenic 25.0%
!!! TGACTTTTTGTCATTTTGTT+TGG + chr2.4:21591088-21591107 None:intergenic 25.0%
!!! TGCTTTGAATTTTGATTTAC+CGG - chr2.4:21591119-21591138 MS.gene63395:intron 25.0%
!!! TTATTTCTAAAGTTGCTTGA+AGG - chr2.4:21591903-21591922 MS.gene63395:CDS 25.0%
!!! TTTAGTTTTATGCAGTTGAT+GGG - chr2.4:21587643-21587662 MS.gene63395:intron 25.0%
!!! TTTTAGTTTTATGCAGTTGA+TGG - chr2.4:21587642-21587661 MS.gene63395:intron 25.0%
AAATAAGGATAGTGCAGAAA+AGG - chr2.4:21591290-21591309 MS.gene63395:intron 30.0%
AACGTTACCCAAAAAATTTC+TGG + chr2.4:21589316-21589335 None:intergenic 30.0%
AAGCAAGTCATGATATTAGT+AGG - chr2.4:21589140-21589159 MS.gene63395:CDS 30.0%
AATTGACCATACCAAAATGA+TGG + chr2.4:21588621-21588640 None:intergenic 30.0%
AGAATCACAGTATACTTCAA+GGG + chr2.4:21591853-21591872 None:intergenic 30.0%
AGATTCGATTTCGTGAATTA+GGG + chr2.4:21587401-21587420 None:intergenic 30.0%
AGTATACTGTGATTCTCATT+AGG - chr2.4:21591857-21591876 MS.gene63395:CDS 30.0%
AGTCATACATAAAGGTGATA+AGG + chr2.4:21591543-21591562 None:intergenic 30.0%
ATAGCAGTAGTTATGTAACA+TGG - chr2.4:21590828-21590847 MS.gene63395:CDS 30.0%
ATATCTACCAAAGCTGTTAA+CGG - chr2.4:21591739-21591758 MS.gene63395:intron 30.0%
ATCAAATGAAGCAAAAAGGT+TGG - chr2.4:21587617-21587636 MS.gene63395:intron 30.0%
ATTGACCATACCAAAATGAT+GGG + chr2.4:21588620-21588639 None:intergenic 30.0%
CTATTACATGTTCCAAAACT+TGG - chr2.4:21589458-21589477 MS.gene63395:intron 30.0%
CTTTAGATGACAGTTTACTA+GGG + chr2.4:21591062-21591081 None:intergenic 30.0%
GAAAAAATTTCATGTCACTC+TGG - chr2.4:21588779-21588798 MS.gene63395:CDS 30.0%
GATAAGAAAATAGCACAACA+AGG + chr2.4:21589711-21589730 None:intergenic 30.0%
GGAAATTGAAGAGATTTGAT+TGG + chr2.4:21587472-21587491 None:intergenic 30.0%
GTAATAGTGATAGATTGTCT+TGG + chr2.4:21589445-21589464 None:intergenic 30.0%
GTGACTTCTACACTATAATA+TGG + chr2.4:21591424-21591443 None:intergenic 30.0%
TAAGAAAATAGCACAACAAG+GGG + chr2.4:21589709-21589728 None:intergenic 30.0%
TACAACTAAGAAAGCTGATA+CGG - chr2.4:21591675-21591694 MS.gene63395:intron 30.0%
TATTAGACATGCCTTCAATT+AGG - chr2.4:21588207-21588226 MS.gene63395:intron 30.0%
TCAAATGAAGCAAAAAGGTT+GGG - chr2.4:21587618-21587637 MS.gene63395:intron 30.0%
TCTTTAGATGACAGTTTACT+AGG + chr2.4:21591063-21591082 None:intergenic 30.0%
TCTTTCATGTGACCAAAAAA+TGG - chr2.4:21589503-21589522 MS.gene63395:intron 30.0%
TGAAAGAAACATTATTAGGG+AGG + chr2.4:21589490-21589509 None:intergenic 30.0%
TGAACAACATTACTCTTTGT+TGG + chr2.4:21590426-21590445 None:intergenic 30.0%
TGAGTTTATGCTTGTTTGTT+TGG - chr2.4:21588413-21588432 MS.gene63395:CDS 30.0%
TGTCAGTGTTGTATTATTGT+CGG - chr2.4:21588183-21588202 MS.gene63395:intron 30.0%
TTCATGTCATGGTTTCATAT+AGG + chr2.4:21588577-21588596 None:intergenic 30.0%
TTGTTGAAAAACATGAGGAT+GGG - chr2.4:21587779-21587798 MS.gene63395:intron 30.0%
TTTAAGTGTCAGTGCTATAT+AGG - chr2.4:21588062-21588081 MS.gene63395:CDS 30.0%
TTTCTGTGAATTGCTTTAGT+AGG - chr2.4:21589334-21589353 MS.gene63395:CDS 30.0%
TTTGTTGAAAAACATGAGGA+TGG - chr2.4:21587778-21587797 MS.gene63395:intron 30.0%
! AAATCAGATTGAAAGTACAG+TGG + chr2.4:21592086-21592105 None:intergenic 30.0%
! AATCAGATTGAAAGTACAGT+GGG + chr2.4:21592085-21592104 None:intergenic 30.0%
! AGAAATTAAACCGTTGGTTA+AGG - chr2.4:21591143-21591162 MS.gene63395:intron 30.0%
! ATCATGTTACTATTTTCCTC+TGG + chr2.4:21590720-21590739 None:intergenic 30.0%
! CTTTTGTACAAAGGGTAAAA+AGG - chr2.4:21590337-21590356 MS.gene63395:intron 30.0%
! GAATTGTGTGCTATGTTTTT+AGG + chr2.4:21590456-21590475 None:intergenic 30.0%
! TTTTGTAGCCAGAAAAAAAG+TGG - chr2.4:21590008-21590027 MS.gene63395:intron 30.0%
!! AATTTCAGGTTTCATACAAG+TGG - chr2.4:21587571-21587590 MS.gene63395:intron 30.0%
!! ACTAATATCATGACTTGCTT+GGG + chr2.4:21589140-21589159 None:intergenic 30.0%
!! GCTTTGAAATTGAAAATTGG+GGG + chr2.4:21587508-21587527 None:intergenic 30.0%
!! GGCTTTGAAATTGAAAATTG+GGG + chr2.4:21587509-21587528 None:intergenic 30.0%
!! GTGTTTTCTTCATAGTTTTG+TGG - chr2.4:21588386-21588405 MS.gene63395:CDS 30.0%
!! TACTAATATCATGACTTGCT+TGG + chr2.4:21589141-21589160 None:intergenic 30.0%
!! TGTTGCTTTGTGAAATTGAT+GGG - chr2.4:21587688-21587707 MS.gene63395:intron 30.0%
!! TTGTTGCTTTGTGAAATTGA+TGG - chr2.4:21587687-21587706 MS.gene63395:intron 30.0%
!!! ACAAGAGACCAGAAATTTTT+TGG - chr2.4:21589305-21589324 MS.gene63395:CDS 30.0%
!!! CAAGAGACCAGAAATTTTTT+GGG - chr2.4:21589306-21589325 MS.gene63395:CDS 30.0%
AAACATAAAGGATCCCAAAC+AGG - chr2.4:21592285-21592304 MS.gene63395:CDS 35.0%
AAAGGACAAGCTGATAAAAG+TGG - chr2.4:21590624-21590643 MS.gene63395:intron 35.0%
AACATAAAGGATCCCAAACA+GGG - chr2.4:21592286-21592305 MS.gene63395:CDS 35.0%
AACATGATTTCAAAACCTGC+AGG - chr2.4:21590732-21590751 MS.gene63395:CDS 35.0%
AACCATGACATGAACCAATT+TGG - chr2.4:21588583-21588602 MS.gene63395:CDS 35.0%
ACATCAAATACTACTGGAAG+AGG - chr2.4:21592244-21592263 MS.gene63395:intron 35.0%
AGTAAAATCTGTAGTAGGCT+TGG - chr2.4:21590398-21590417 MS.gene63395:intron 35.0%
ATAATTGCTTGGGAGACAAT+AGG - chr2.4:21589001-21589020 MS.gene63395:CDS 35.0%
ATTAGTGTTGTAATCGCCAT+TGG + chr2.4:21589269-21589288 None:intergenic 35.0%
ATTTGTCAGTTCAGTATGAG+TGG + chr2.4:21589226-21589245 None:intergenic 35.0%
CAAGAAAGCAGGAAACATAA+AGG - chr2.4:21592273-21592292 MS.gene63395:intron 35.0%
CATATTCCAAAAGCAGAAGA+TGG + chr2.4:21589571-21589590 None:intergenic 35.0%
CCAGAAGTAAAATCTGTAGT+AGG - chr2.4:21590393-21590412 MS.gene63395:intron 35.0%
CCTACTTCCTAATGTTTGTA+AGG + chr2.4:21588809-21588828 None:intergenic 35.0%
CCTGTACAAAAAGATGCTAA+AGG + chr2.4:21588525-21588544 None:intergenic 35.0%
CCTTACAAACATTAGGAAGT+AGG - chr2.4:21588806-21588825 MS.gene63395:CDS 35.0%
CTGTCTTATATGTGTCTTTG+CGG - chr2.4:21590256-21590275 MS.gene63395:intron 35.0%
GAAAGAATATTGCCCTGTTT+GGG + chr2.4:21592301-21592320 None:intergenic 35.0%
GAGAATCACAGTATACTTCA+AGG + chr2.4:21591854-21591873 None:intergenic 35.0%
GAGATTCGATTTCGTGAATT+AGG + chr2.4:21587402-21587421 None:intergenic 35.0%
GATTTCGTGAATTAGGGATA+GGG + chr2.4:21587395-21587414 None:intergenic 35.0%
GGAAGCAATCAATACTTCAA+AGG - chr2.4:21591804-21591823 MS.gene63395:intron 35.0%
GTAAAATCTGTAGTAGGCTT+GGG - chr2.4:21590399-21590418 MS.gene63395:intron 35.0%
GTATCCTTGTCATCTTTCTT+TGG + chr2.4:21591658-21591677 None:intergenic 35.0%
TATCTACCAAAGCTGTTAAC+GGG - chr2.4:21591740-21591759 MS.gene63395:intron 35.0%
TCCAAAGCTGATAATTGCTT+GGG - chr2.4:21588991-21589010 MS.gene63395:CDS 35.0%
TGAAAGAATATTGCCCTGTT+TGG + chr2.4:21592302-21592321 None:intergenic 35.0%
TGAACTATGAAGGTTAGACA+CGG - chr2.4:21587939-21587958 MS.gene63395:intron 35.0%
TGATCTCAAAACACAGAATG+TGG - chr2.4:21590488-21590507 MS.gene63395:intron 35.0%
TGTACAGGAACTGAAGTAAT+TGG - chr2.4:21588537-21588556 MS.gene63395:CDS 35.0%
TGTTATATGTAGGTTGCTTC+AGG - chr2.4:21587753-21587772 MS.gene63395:intron 35.0%
TTCAGTAACTGAAGTAGTCT+GGG - chr2.4:21591615-21591634 MS.gene63395:intron 35.0%
TTCCAAAGCTGATAATTGCT+TGG - chr2.4:21588990-21589009 MS.gene63395:CDS 35.0%
! AAGAATTTTCTTTTACCGCC+AGG - chr2.4:21590195-21590214 MS.gene63395:intron 35.0%
! ACAAACATAACTGATGGTGA+TGG - chr2.4:21588469-21588488 MS.gene63395:CDS 35.0%
! ACAGTGAAGTATTAAGCAGT+AGG + chr2.4:21588296-21588315 None:intergenic 35.0%
! ACCAACGGTTTAATTTCTAC+CGG + chr2.4:21591141-21591160 None:intergenic 35.0%
! AGTGATGACGATGATAATCA+AGG - chr2.4:21590940-21590959 MS.gene63395:intron 35.0%
! ATCAGATTGAAAGTACAGTG+GGG + chr2.4:21592084-21592103 None:intergenic 35.0%
! CAGTGAAGTATTAAGCAGTA+GGG + chr2.4:21588295-21588314 None:intergenic 35.0%
! CCTACTACAGATTTTACTTC+TGG + chr2.4:21590396-21590415 None:intergenic 35.0%
! CCTTTAGCATCTTTTTGTAC+AGG - chr2.4:21588522-21588541 MS.gene63395:CDS 35.0%
! GACTTTTCTTTCTCTGCAAT+AGG + chr2.4:21590579-21590598 None:intergenic 35.0%
! GATAAAAGTGGCTCTGTTAA+TGG - chr2.4:21590636-21590655 MS.gene63395:intron 35.0%
! GGCTAACTAGCATATTTTTC+AGG - chr2.4:21590295-21590314 MS.gene63395:intron 35.0%
! GTTTTTCTGACCCATCATTT+TGG - chr2.4:21588607-21588626 MS.gene63395:CDS 35.0%
!! AAAGCTGCTTTGAAAAGTAG+GGG - chr2.4:21589898-21589917 MS.gene63395:intron 35.0%
!! AGAAAGCTGCTTTGAAAAGT+AGG - chr2.4:21589896-21589915 MS.gene63395:intron 35.0%
!! CACTGATTCAGAAGCTTTAT+TGG + chr2.4:21589969-21589988 None:intergenic 35.0%
!! CTAATATCATGACTTGCTTG+GGG + chr2.4:21589139-21589158 None:intergenic 35.0%
!! CTGATAAATCTTTTGGTGGT+TGG + chr2.4:21591197-21591216 None:intergenic 35.0%
!! GAAAGCTGCTTTGAAAAGTA+GGG - chr2.4:21589897-21589916 MS.gene63395:intron 35.0%
!! GGAGTTTGTTGAAAAACATG+AGG - chr2.4:21587774-21587793 MS.gene63395:intron 35.0%
!! TAAATGTCTTGGTGTCGTAT+TGG - chr2.4:21588013-21588032 MS.gene63395:CDS 35.0%
!! TAATATCATGACTTGCTTGG+GGG + chr2.4:21589138-21589157 None:intergenic 35.0%
!! TACAGATTTTACTTCTGGAG+TGG + chr2.4:21590391-21590410 None:intergenic 35.0%
!! TCTTTCCATTGCTTTTGTGT+GGG - chr2.4:21589653-21589672 MS.gene63395:intron 35.0%
!! TTCATCACTTTTCTCCTCTT+AGG + chr2.4:21591330-21591349 None:intergenic 35.0%
!!! ACTGACACTGAACCATTTTT+TGG + chr2.4:21589518-21589537 None:intergenic 35.0%
!!! AGCATATTTTTCAGGTTCTG+TGG - chr2.4:21590303-21590322 MS.gene63395:intron 35.0%
!!! ATGCATTGTTTTAACTCACC+AGG - chr2.4:21591389-21591408 MS.gene63395:intron 35.0%
!!! CATTTTTTATGCAGAAGCAC+AGG - chr2.4:21588849-21588868 MS.gene63395:intron 35.0%
!!! GCATATTTTTCAGGTTCTGT+GGG - chr2.4:21590304-21590323 MS.gene63395:intron 35.0%
!!! TCAAACCACCACTTTTTTTC+TGG + chr2.4:21590019-21590038 None:intergenic 35.0%
!!! TTGTGTGCTATGTTTTTAGG+AGG + chr2.4:21590453-21590472 None:intergenic 35.0%
!!! TTTTTGGTTCTCTTTGCCAA+TGG - chr2.4:21589250-21589269 MS.gene63395:CDS 35.0%
AAATATGCTAGTTAGCCACC+AGG + chr2.4:21590292-21590311 None:intergenic 40.0%
AAATTGGGGGAAGAGAAGTA+AGG + chr2.4:21587495-21587514 None:intergenic 40.0%
AAGACTAGGATTGATGAACG+AGG - chr2.4:21591348-21591367 MS.gene63395:intron 40.0%
AAGAGTGAAAGCAATGGTAC+AGG - chr2.4:21590522-21590541 MS.gene63395:intron 40.0%
AAGCACAGGAAGAGTTTGAT+GGG - chr2.4:21588863-21588882 MS.gene63395:intron 40.0%
AATGTTATTGCTGGCCAAAG+TGG + chr2.4:21592036-21592055 None:intergenic 40.0%
AATTGGGGGAAGAGAAGTAA+GGG + chr2.4:21587494-21587513 None:intergenic 40.0%
ACAAAGGGTAAAAAGGAACG+AGG - chr2.4:21590344-21590363 MS.gene63395:intron 40.0%
ACCGGTAGAAATTAAACCGT+TGG - chr2.4:21591137-21591156 MS.gene63395:intron 40.0%
ACTCTCTCATCCTTAACCAA+CGG + chr2.4:21591156-21591175 None:intergenic 40.0%
AGAGCCAAAGAAAGATGACA+AGG - chr2.4:21591651-21591670 MS.gene63395:intron 40.0%
ATCATCCAACAGGAAAAGGA+GGG - chr2.4:21590978-21590997 MS.gene63395:intron 40.0%
CATCAGTTTAGCATCAGATG+AGG - chr2.4:21591035-21591054 MS.gene63395:intron 40.0%
CCAGCTACATCAAATACTAC+TGG - chr2.4:21592238-21592257 MS.gene63395:intron 40.0%
CCAGTAGTATTTGATGTAGC+TGG + chr2.4:21592241-21592260 None:intergenic 40.0%
CCTGTTGGATGATCTTCTTA+AGG + chr2.4:21590971-21590990 None:intergenic 40.0%
CCTTAAGAAGATCATCCAAC+AGG - chr2.4:21590968-21590987 MS.gene63395:intron 40.0%
CGATTTCGTGAATTAGGGAT+AGG + chr2.4:21587396-21587415 None:intergenic 40.0%
CTTCAGTAACTGAAGTAGTC+TGG - chr2.4:21591614-21591633 MS.gene63395:intron 40.0%
GAAATTCGAGAAACCAAACC+AGG - chr2.4:21589539-21589558 MS.gene63395:intron 40.0%
GAAGATCATCCAACAGGAAA+AGG - chr2.4:21590974-21590993 MS.gene63395:intron 40.0%
GATGTCAAGAGTGAAAGCAA+TGG - chr2.4:21590516-21590535 MS.gene63395:intron 40.0%
GCGGCAATTATGAACTATGA+AGG - chr2.4:21587929-21587948 MS.gene63395:intron 40.0%
GGAGAAAAGTGATGAAGACT+AGG - chr2.4:21591334-21591353 MS.gene63395:intron 40.0%
GGGTCAGAAAAACACCAAAT+TGG + chr2.4:21588600-21588619 None:intergenic 40.0%
GGTTGCAAAGAAAGCTGATA+CGG - chr2.4:21591696-21591715 MS.gene63395:intron 40.0%
GTAGTATTTGATGTAGCTGG+TGG + chr2.4:21592238-21592257 None:intergenic 40.0%
GTATTCCTAGCTACCATGTA+AGG - chr2.4:21587842-21587861 MS.gene63395:intron 40.0%
GTGAATTAGGGATAGGGTTT+CGG + chr2.4:21587389-21587408 None:intergenic 40.0%
GTGCTCTATCATTCCAATAG+TGG + chr2.4:21589598-21589617 None:intergenic 40.0%
TCAAATACTACTGGAAGAGG+AGG - chr2.4:21592247-21592266 MS.gene63395:intron 40.0%
TCCCAAGCAATTATCAGCTT+TGG + chr2.4:21588995-21589014 None:intergenic 40.0%
TGAAAAACATGAGGATGGGT+TGG - chr2.4:21587783-21587802 MS.gene63395:intron 40.0%
TGAAACCCACACAAAAGCAA+TGG + chr2.4:21589661-21589680 None:intergenic 40.0%
TGATACGGTTGCAAAGAAAG+CGG - chr2.4:21591690-21591709 MS.gene63395:intron 40.0%
TGATTTCAAAACCTGCAGGT+TGG - chr2.4:21590736-21590755 MS.gene63395:CDS 40.0%
TGCTTCATGAGCACAAGTTT+GGG + chr2.4:21590908-21590927 None:intergenic 40.0%
TGGAATATGCTCTCCACTAT+TGG - chr2.4:21589582-21589601 MS.gene63395:intron 40.0%
TGTAGCCAGAAAAAAAGTGG+TGG - chr2.4:21590011-21590030 MS.gene63395:intron 40.0%
TGTCAGTGCTATATAGGTAC+CGG - chr2.4:21588068-21588087 MS.gene63395:CDS 40.0%
TGTGCAAGCTAGTATTCCAA+AGG - chr2.4:21588909-21588928 MS.gene63395:intron 40.0%
TTCCAAAAGCAGAAGATGGA+AGG + chr2.4:21589567-21589586 None:intergenic 40.0%
! AAAAGTGGCTCTGTTAATGG+AGG - chr2.4:21590639-21590658 MS.gene63395:intron 40.0%
! ATCCTTCCATCTTCTGCTTT+TGG - chr2.4:21589562-21589581 MS.gene63395:intron 40.0%
! ATGCCTTCAATTAGGAGTGT+TGG - chr2.4:21588215-21588234 MS.gene63395:intron 40.0%
! CACCAAATTGGTTCATGTCA+TGG + chr2.4:21588588-21588607 None:intergenic 40.0%
! GGGAGGAAAAAACCAAGTTT+TGG + chr2.4:21589473-21589492 None:intergenic 40.0%
! GGTTTGAGTGTCAACCTTTT+GGG - chr2.4:21588434-21588453 MS.gene63395:CDS 40.0%
! GTTTGAGTGTCAACCTTTTG+GGG - chr2.4:21588435-21588454 MS.gene63395:CDS 40.0%
! TAGCTTGCACACTATATACC+TGG + chr2.4:21588900-21588919 None:intergenic 40.0%
! TGGAGTGCCTTACAAACATT+AGG - chr2.4:21588799-21588818 MS.gene63395:CDS 40.0%
! TGGTTTGAGTGTCAACCTTT+TGG - chr2.4:21588433-21588452 MS.gene63395:CDS 40.0%
! TTGTCCTTTCTTTTTGCCTG+CGG + chr2.4:21590613-21590632 None:intergenic 40.0%
!! ACCATGTAAGGCTTGTTACT+GGG - chr2.4:21587854-21587873 MS.gene63395:intron 40.0%
!! ATTGCTTTTGTGTGGGTTTC+AGG - chr2.4:21589660-21589679 MS.gene63395:intron 40.0%
!! GTCGTATTGGTGTCAGATAT+CGG - chr2.4:21588026-21588045 MS.gene63395:CDS 40.0%
!! GTCTTTCCATTGCTTTTGTG+TGG - chr2.4:21589652-21589671 MS.gene63395:intron 40.0%
!! TACCATGTAAGGCTTGTTAC+TGG - chr2.4:21587853-21587872 MS.gene63395:intron 40.0%
!! TCGTATTGGTGTCAGATATC+GGG - chr2.4:21588027-21588046 MS.gene63395:CDS 40.0%
!! TCTGACCCATCATTTTGGTA+TGG - chr2.4:21588612-21588631 MS.gene63395:CDS 40.0%
!!! GTGCTATGTTTTTAGGAGGT+TGG + chr2.4:21590449-21590468 None:intergenic 40.0%
AAGATGGAAGGATCCTGGTT+TGG + chr2.4:21589555-21589574 None:intergenic 45.0%
AATGTGTGATGCATCTCTCC+AGG - chr2.4:21589840-21589859 MS.gene63395:intron 45.0%
ACAAGCCTTACATGGTAGCT+AGG + chr2.4:21587850-21587869 None:intergenic 45.0%
ACTTCAAGGGACACCTAACA+AGG + chr2.4:21591840-21591859 None:intergenic 45.0%
AGCAATGGTACAGGAAATGC+AGG - chr2.4:21590531-21590550 MS.gene63395:intron 45.0%
AGGGTAAAAAGGAACGAGGA+TGG - chr2.4:21590348-21590367 MS.gene63395:intron 45.0%
AGTAACTGAAGTAGTCTGGG+AGG - chr2.4:21591618-21591637 MS.gene63395:intron 45.0%
ATCACCAAGTGCACAAGTAC+TGG - chr2.4:21591219-21591238 MS.gene63395:intron 45.0%
ATGAGTGGCATCAAATCTGC+TGG + chr2.4:21589211-21589230 None:intergenic 45.0%
ATTGGGGGAAGAGAAGTAAG+GGG + chr2.4:21587493-21587512 None:intergenic 45.0%
CACTAACCCGTTAACAGCTT+TGG + chr2.4:21591749-21591768 None:intergenic 45.0%
CGTCTCAGATCAACTTCAAG+TGG - chr2.4:21587423-21587442 MS.gene63395:CDS 45.0%
CGTTGTGCAATTACATGTCC+TGG + chr2.4:21589861-21589880 None:intergenic 45.0%
CTAGTTAGCCACCAGGAATT+AGG + chr2.4:21590285-21590304 None:intergenic 45.0%
CTCTGCAACTTCTCAGTAGA+TGG + chr2.4:21591249-21591268 None:intergenic 45.0%
CTCTGTTAATGGAGGTTCGT+TGG - chr2.4:21590647-21590666 MS.gene63395:intron 45.0%
CTGCTTCATGAGCACAAGTT+TGG + chr2.4:21590909-21590928 None:intergenic 45.0%
CTTTGCGGTTTCCTAATTCC+TGG - chr2.4:21590271-21590290 MS.gene63395:intron 45.0%
GAAGCACAGGAAGAGTTTGA+TGG - chr2.4:21588862-21588881 MS.gene63395:intron 45.0%
GAAGTGGTGTATGCTTTGTC+TGG - chr2.4:21587805-21587824 MS.gene63395:intron 45.0%
GATCATCCAACAGGAAAAGG+AGG - chr2.4:21590977-21590996 MS.gene63395:intron 45.0%
GCACCAACACTCCTAATTGA+AGG + chr2.4:21588221-21588240 None:intergenic 45.0%
GTAACTGAAGTAGTCTGGGA+GGG - chr2.4:21591619-21591638 MS.gene63395:intron 45.0%
GTGTGTCTGTTTGACATGTC+CGG + chr2.4:21588090-21588109 None:intergenic 45.0%
TAACTGAAGTAGTCTGGGAG+GGG - chr2.4:21591620-21591639 MS.gene63395:intron 45.0%
TACTAGCCGATTGTCCACTT+TGG - chr2.4:21592019-21592038 MS.gene63395:intron 45.0%
TCACCAAGTGCACAAGTACT+GGG - chr2.4:21591220-21591239 MS.gene63395:intron 45.0%
TCCCAGTAACAAGCCTTACA+TGG + chr2.4:21587858-21587877 None:intergenic 45.0%
TGTGCTCATGAAGCAGTACT+GGG - chr2.4:21590913-21590932 MS.gene63395:intron 45.0%
TTGCTTGGGAGACAATAGGT+AGG - chr2.4:21589005-21589024 MS.gene63395:CDS 45.0%
TTGTGCTCATGAAGCAGTAC+TGG - chr2.4:21590912-21590931 MS.gene63395:intron 45.0%
TTTCCCAGTACTTGTGCACT+TGG + chr2.4:21591226-21591245 None:intergenic 45.0%
TTTCTCCTCTTAGGTGAACC+TGG + chr2.4:21591321-21591340 None:intergenic 45.0%
! GTTTTCAACCTGACCCCAAA+AGG + chr2.4:21588451-21588470 None:intergenic 45.0%
! TGTCCTTTCTTTTTGCCTGC+GGG + chr2.4:21590612-21590631 None:intergenic 45.0%
!! CAGTGTCGATGTATCAGTGT+CGG + chr2.4:21587980-21587999 None:intergenic 45.0%
!!! CAAGGCTTGGGTTTTGAAGA+TGG + chr2.4:21590690-21590709 None:intergenic 45.0%
!! TAATTATTGAATATATATTA+CGG + chr2.4:21589374-21589393 None:intergenic 5.0%
!!! GAATTTTTTTTTTTTTTTTT+TGG - chr2.4:21589920-21589939 MS.gene63395:intron 5.0%
AACTGAAGTAGTCTGGGAGG+GGG - chr2.4:21591621-21591640 MS.gene63395:intron 50.0%
AAGGAACGAGGATGGACAAC+CGG - chr2.4:21590356-21590375 MS.gene63395:intron 50.0%
AGAGGAGGAAGCAAGAAAGC+AGG - chr2.4:21592262-21592281 MS.gene63395:intron 50.0%
AGAGTTCAAGACTGAGCACC+TGG + chr2.4:21590216-21590235 None:intergenic 50.0%
AGCAGAAGATGGAAGGATCC+TGG + chr2.4:21589560-21589579 None:intergenic 50.0%
AGGCTGCATGACTCCTTGTT+AGG - chr2.4:21591824-21591843 MS.gene63395:intron 50.0%
AGGTTCGTTGGCAAGCTTCT+GGG - chr2.4:21590659-21590678 MS.gene63395:intron 50.0%
AGTGCAGAAAAGGTCTCTCC+AGG - chr2.4:21591300-21591319 MS.gene63395:intron 50.0%
CAAAGCACAGCTGCATCCTT+TGG + chr2.4:21588928-21588947 None:intergenic 50.0%
CAAAGGATGCAGCTGTGCTT+TGG - chr2.4:21588926-21588945 MS.gene63395:intron 50.0%
CACAACAAGGGGTGAGAAAG+AGG + chr2.4:21589698-21589717 None:intergenic 50.0%
GAAGTTGCAGAGCAATGCTC+CGG - chr2.4:21591257-21591276 MS.gene63395:intron 50.0%
GTTACTGGGACAATGCTTGC+AGG - chr2.4:21587868-21587887 MS.gene63395:intron 50.0%
TCATTGCATTTCCAGCGCAC+CGG - chr2.4:21592201-21592220 MS.gene63395:intron 50.0%
TCTCTCCAGGTTCACCTAAG+AGG - chr2.4:21591313-21591332 MS.gene63395:intron 50.0%
TGATGGGAAATGCTCAGTCC+AGG - chr2.4:21588879-21588898 MS.gene63395:intron 50.0%
TGCGGTTTCCTAATTCCTGG+TGG - chr2.4:21590274-21590293 MS.gene63395:intron 50.0%
TGCTGGCCAAAGTGGACAAT+CGG + chr2.4:21592028-21592047 None:intergenic 50.0%
TGGTGTATGCTTTGTCTGGC+TGG - chr2.4:21587809-21587828 MS.gene63395:intron 50.0%
TTGCCCGCAGGCAAAAAGAA+AGG - chr2.4:21590606-21590625 MS.gene63395:intron 50.0%
! GACAACCCTCCTTTTCCTGT+TGG + chr2.4:21590986-21591005 None:intergenic 50.0%
! TTCTTTTTGCCTGCGGGCAA+GGG + chr2.4:21590606-21590625 None:intergenic 50.0%
! TTTCTTTTTGCCTGCGGGCA+AGG + chr2.4:21590607-21590626 None:intergenic 50.0%
!! ACATGAGGATGGGTTGGAAG+TGG - chr2.4:21587789-21587808 MS.gene63395:intron 50.0%
!! CTGCAGGTTGGTTTCCATTC+CGG - chr2.4:21590748-21590767 MS.gene63395:CDS 50.0%
!! TTAGGAGTGTTGGTGCTGCA+TGG - chr2.4:21588225-21588244 MS.gene63395:intron 50.0%
!!! AGTGTCAACCTTTTGGGGTC+AGG - chr2.4:21588440-21588459 MS.gene63395:CDS 50.0%
CGGAATGGAAACCAACCTGC+AGG + chr2.4:21590750-21590769 None:intergenic 55.0%
GAGGTTCGTTGGCAAGCTTC+TGG - chr2.4:21590658-21590677 MS.gene63395:intron 55.0%
GCTGGTGGCTTCTTAGTTGC+CGG + chr2.4:21592223-21592242 None:intergenic 55.0%
GGTTCGTTGGCAAGCTTCTG+GGG - chr2.4:21590660-21590679 MS.gene63395:intron 55.0%
GTTCAAGACTGAGCACCTGG+CGG + chr2.4:21590213-21590232 None:intergenic 55.0%
! TCTGGAGTGGCAGAAACTGC+CGG + chr2.4:21590378-21590397 None:intergenic 55.0%
! TTTTCCTCTGGCACAGCGCA+AGG + chr2.4:21590708-21590727 None:intergenic 55.0%
!! TGTGTGGGTTTCAGGTTCGC+TGG - chr2.4:21589668-21589687 MS.gene63395:intron 55.0%
AAGTCTCTTCCCTTGCCCGC+AGG - chr2.4:21590594-21590613 MS.gene63395:intron 60.0%
CTTCTTAGTTGCCGGTGCGC+TGG + chr2.4:21592215-21592234 None:intergenic 60.0%
TCTGGCACAGCGCAAGGCTT+GGG + chr2.4:21590702-21590721 None:intergenic 60.0%
TGAAGTAGTCTGGGAGGGGG+AGG - chr2.4:21591624-21591643 MS.gene63395:intron 60.0%
CAAGCCTTGCGCTGTGCCAG+AGG - chr2.4:21590701-21590720 MS.gene63395:CDS 65.0%
CTCTGGCACAGCGCAAGGCT+TGG + chr2.4:21590703-21590722 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 21587376 21592342 21587376 ID=MS.gene63395
chr2.4 mRNA 21587376 21592342 21587376 ID=MS.gene63395.t1;Parent=MS.gene63395
chr2.4 exon 21592274 21592342 21592274 ID=MS.gene63395.t1.exon1;Parent=MS.gene63395.t1
chr2.4 CDS 21592274 21592342 21592274 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
chr2.4 exon 21592084 21592139 21592084 ID=MS.gene63395.t1.exon2;Parent=MS.gene63395.t1
chr2.4 CDS 21592084 21592139 21592084 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
chr2.4 exon 21591829 21591953 21591829 ID=MS.gene63395.t1.exon3;Parent=MS.gene63395.t1
chr2.4 CDS 21591829 21591953 21591829 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
chr2.4 exon 21590696 21590855 21590696 ID=MS.gene63395.t1.exon4;Parent=MS.gene63395.t1
chr2.4 CDS 21590696 21590855 21590696 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
chr2.4 exon 21588965 21589401 21588965 ID=MS.gene63395.t1.exon5;Parent=MS.gene63395.t1
chr2.4 CDS 21588965 21589401 21588965 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
chr2.4 exon 21588340 21588828 21588340 ID=MS.gene63395.t1.exon6;Parent=MS.gene63395.t1
chr2.4 CDS 21588340 21588828 21588340 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
chr2.4 exon 21587957 21588098 21587957 ID=MS.gene63395.t1.exon7;Parent=MS.gene63395.t1
chr2.4 CDS 21587957 21588098 21587957 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
chr2.4 exon 21587376 21587502 21587376 ID=MS.gene63395.t1.exon8;Parent=MS.gene63395.t1
chr2.4 CDS 21587376 21587502 21587376 ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1
Gene Sequence

>MS.gene63395

ATGTCGAACACCGAAACCCTATCCCTAATTCACGAAATCGAATCTCTCGTCTCAGATCAACTTCAAGTGGTATTCATCTCTCTCTCTCTCTCTCCAATCAAATCTCTTCAATTTCCCCTTACTTCTCTTCCCCCAATTTTCAATTTCAAAGCCTTTTTTTATCCTAAATTTGTTTGATTTCATGAAAATTGGTTTAATTTCAGGTTTCATACAAGTGGCTAAGTCGCAATTATCAGATATCATCAAATGAAGCAAAAAGGTTGGGTTTTTAGTTTTATGCAGTTGATGGGTTTTTTAATGCGTAAAAAGCTTTGTTGCTTTGTGAAATTGATGGGTTTTTTTACTATGGTATGAAATTTGTGAAAAGTTGAAAATTTTGTTATATGTAGGTTGCTTCAGGAGTTTGTTGAAAAACATGAGGATGGGTTGGAAGTGGTGTATGCTTTGTCTGGCTGGTTAAAGAGTAGTATTCCTAGCTACCATGTAAGGCTTGTTACTGGGACAATGCTTGCAGGTACTATCATCTTTTTTATGTATAATAATTATAGTTGTAGCGGCAATTATGAACTATGAAGGTTAGACACGGACACTAGACATGAAACCGACACTGATACATCGACACTGATGATAATTTGAGTAAATGTCTTGGTGTCGTATTGGTGTCAGATATCGGGCATGTCTTAAATTTTAAGTGTCAGTGCTATATAGGTACCGGACATGTCAAACAGACACACGATACTGACACTGCTATGTCGACACTAATAATCATTTGAGAAAATTAAAGTGATTGAAAGTAATTATCACATGTGTCAGTGTTGTATTATTGTCGGATATTAGACATGCCTTCAATTAGGAGTGTTGGTGCTGCATGGATCATGAAAAATGATTTTGACTTTCCATTAATTGTAATTTTTTTCCCTACTGCTTAATACTTCACTGTTTGATGTTTTGATTTGATGTGATATCATTAGATTTTGCTCTATCTTTAATTTTTATCTCATAAACTTGGTGTGTTTTCTTCATAGTTTTGTGGCTGTTGAGTTTATGCTTGTTTGTTTGGTTTGAGTGTCAACCTTTTGGGGTCAGGTTGAAAACAAACATAACTGATGGTGATGGATGTTATTTTTCAAGCGAACTGTTGATTGTCCTTTAGCATCTTTTTGTACAGGAACTGAAGTAATTGGTGTTTATTAATTCTCCTATATGAAACCATGACATGAACCAATTTGGTGTTTTTCTGACCCATCATTTTGGTATGGTCAATTTAGTCTCTATTTGAAGAAATGCTTATTAACTAACTCAATTTAGATTTAGGTGGGCTAGTTTAGCTTCTTCAAAAAAACTAACTCAATTTAGATGTTCAGTTAAAAAAAAATTGGAAACATTGTTGTCCAATGAGTTGAGAAAAAATTTCATGTCACTCTGGAGTGCCTTACAAACATTAGGAAGTAGGAGTATCATGAAACTGATTCTCATTTTTTATGCAGAAGCACAGGAAGAGTTTGATGGGAAATGCTCAGTCCAGGTATATAGTGTGCAAGCTAGTATTCCAAAGGATGCAGCTGTGCTTTGGAATGCAGAATTCATTCAAGCAGAAGAGCTCTTCAAGAAGCTTTCCAAAGCTGATAATTGCTTGGGAGACAATAGGTAGGTTCTATGTCTTCAGAATATGTATATAGTATTTTAGTTTTTTGATAAGGAATATTGAGTATGTATATAGTATTAGTCTATTAGAATATATGGCTTTATCATTTGTTGTCCCCCAAGCAAGTCATGATATTAGTAGGAATGTTTTTTATGAGAATTAGTCTGATTGCTTTATAAAATTTATGCCAGCAGATTTGATGCCACTCATACTGAACTGACAAATTTTCTTTTTGGTTCTCTTTGCCAATGGCGATTACAACACTAATATATTTTGTATACTTGACAAGAGACCAGAAATTTTTTGGGTAACGTTTCTGTGAATTGCTTTAGTAGGAGTACTCAGTGTCACCGTAATATATATTCAATAATTAAAAATGAAACTATTTTTCATGAACTATATGATTTGACTAAATTTGTCGCCAAGACAATCTATCACTATTACATGTTCCAAAACTTGGTTTTTTCCTCCCTAATAATGTTTCTTTCATGTGACCAAAAAATGGTTCAGTGTCAGTAGAAATTCGAGAAACCAAACCAGGATCCTTCCATCTTCTGCTTTTGGAATATGCTCTCCACTATTGGAATGATAGAGCACCAATTTAGTGTTCATAAAAAAAGATTAGCATTAAGTCTTTCCATTGCTTTTGTGTGGGTTTCAGGTTCGCTGGAAGACCTCTTTCTCACCCCTTGTTGTGCTATTTTCTTATCATATATTTGTTTTGTTAAAGTCTTCTGATATTAAAATGTAGAATGGATATAATATAATATGATTTTGGTTTCTATTTTGATATGAAAGAGTGAAAGATAGAATGATGTGAATGTGTGATGCATCTCTCCAGGACATGTAATTGCACAACGTTTTAAAAAGAGATGAGAAAGCTGCTTTGAAAAGTAGGGGAATTTTTTTTTTTTTTTTTTGGTTTCAGATCAACAAAAAGTGCTTCCAATAAAGCTTCTGAATCAGTGTCATTCAAATGTATTTGATTTTTGTAGCCAGAAAAAAAGTGGTGGTTTGATTTTGCAGTTTTTAATTCATTGTATGTATGTGCAATGAGTTGACCAAAATAATCAATCTAATATTTCAATCTTCTGGCAGTTTCTTTTTACTGTTGTAAGATTTAATTTCCTCAATAACTTCATTAATGAAGAATGTAGTCACTGAAAATGATTATAAGAATTTTCTTTTACCGCCAGGTGCTCAGTCTTGAACTCTGAACAGACACGCATGCGTTGCTGTCTTATATGTGTCTTTGCGGTTTCCTAATTCCTGGTGGCTAACTAGCATATTTTTCAGGTTCTGTGGGATCTCTAATTCTTTTGTACAAAGGGTAAAAAGGAACGAGGATGGACAACCGGCAGTTTCTGCCACTCCAGAAGTAAAATCTGTAGTAGGCTTGGGACCAACAAAGAGTAATGTTGTTCACCAACCTCCTAAAAACATAGCACACAATTCTATTGCTAAAGTTGATCTCAAAACACAGAATGTGGAGAAAGATGTCAAGAGTGAAAGCAATGGTACAGGAAATGCAGGAGTTCATGATAACATCAATAAACCTATTGCAGAGAAAGAAAAGTCTCTTCCCTTGCCCGCAGGCAAAAAGAAAGGACAAGCTGATAAAAGTGGCTCTGTTAATGGAGGTTCGTTGGCAAGCTTCTGGGGTCGTCCATCTTCAAAACCCAAGCCTTGCGCTGTGCCAGAGGAAAATAGTAACATGATTTCAAAACCTGCAGGTTGGTTTCCATTCCGGTTTATTGAATATATTTTTTTAAGATTTTTCAAATCCTTCTCGATGATTATAGTTATAATAGCAGTAGTTATGTAACATGGCATCTCCAAAAAATTTACTGACATAATTAAATCTTTCAGAAGCTATTGAAAATGCCCAAACTTGTGCTCATGAAGCAGTACTGGGTGACAGTGATGACGATGATAATCAAGGTGTCGCCTTAAGAAGATCATCCAACAGGAAAAGGAGGGTTGTCTTTGATTTCTCAGATGAAGATGAAGATGTCATCAGTTTAGCATCAGATGAGGTCCCTAGTAAACTGTCATCTAAAGATTCCAAACAAAATGACAAAAAGTCATTAGAGAAAGTTGCTTTGAATTTTGATTTACCGGTAGAAATTAAACCGTTGGTTAAGGATGAGAGAGTTACTGAGAAAAAAGTTGTCCAACCACCAAAAGATTTATCAGTTATCACCAAGTGCACAAGTACTGGGAAACCATCTACTGAGAAGTTGCAGAGCAATGCTCCGGAAATTTGTATAAATAAGGATAGTGCAGAAAAGGTCTCTCCAGGTTCACCTAAGAGGAGAAAAGTGATGAAGACTAGGATTGATGAACGAGGAAGAGAAGGTACCCTTAAATGCATTGTTTTAACTCACCAGGTTCTTTTTTCCATATTATAGTGTAGAAGTCACCTTTATGTATGACTATAATATGTTAATTTTGCACTTATGTTTTGAACCTAGTTCTTTACGAAAATTTCACTTATATATGCATGATTATCGGGTGATCCTTATCACCTTTATGTATGACTATTAGTTCTTTTGTATTATATATTTGTATTTGTCTCTTACTTATGTTTATTCTTCAGTAACTGAAGTAGTCTGGGAGGGGGAGGAGACAGAGCCAAAGAAAGATGACAAGGATACAACTAAGAAAGCTGATACGGTTGCAAAGAAAGCTGATACGGTTGCAAAGAAAGCGGACAATATATCTACCAAAGCTGTTAACGGGTTAGTGTTATTCTTACATTTGAATTGAATGAATGAAATTTTGGAAGCAATCAATACTTCAAAGGCTGCATGACTCCTTGTTAGGTGTCCCTTGAAGTATACTGTGATTCTCATTAGGTTTGCTTTGCAACTTGCACAGTCTTATTTCTAAAGTTGCTTGAAGGTTTGACAAAAAATTCCTGATTTCATGATATATTAAAATAAGTTTTACATTGATATGAGCAATTCATGAATATAGGCAGTTCATTGCTCATTCTTACTAGCCGATTGTCCACTTTGGCCAGCAATAACATTTTAAAACTTTGAAGTTTGTAGACATCCCCACTGTACTTTCAATCTGATTTTATGGTTTAAACTCAATTTTTTTTTTTTTTTGAAACAAAAGTTTACTGTTTTATTGCAAGTTTAAAGCTTGACAGTGATTGATGACTAACTTCATTCATTGCATTTCCAGCGCACCGGCAACTAAGAAGCCACCAGCTACATCAAATACTACTGGAAGAGGAGGAAGCAAGAAAGCAGGAAACATAAAGGATCCCAAACAGGGCAATATTCTTTCATTTTTCAAAAAGAAAGTGTGA

Protein sequence

>MS.gene63395.t1

MSNTETLSLIHEIESLVSDQLQVVSYKWLSRNYQISSNEAKRLLQEFVEKHEDGLEVVYALSGWLKSSIPSYHVRLVTGTMLAEAQEEFDGKCSVQVYSVQASIPKDAAVLWNAEFIQAEELFKKLSKADNCLGDNRFCGISNSFVQRVKRNEDGQPAVSATPEVKSVVGLGPTKSNVVHQPPKNIAHNSIAKVDLKTQNVEKDVKSESNGTGNAGVHDNINKPIAEKEKSLPLPAGKKKGQADKSGSVNGGSLASFWGRPSSKPKPCAVPEENSNMISKPAEAIENAQTCAHEAVLGDSDDDDNQGVALRRSSNRKRRVVFDFSDEDEDVISLASDEVPSKLSSKDSKQNDKKSLEKVALNFDLPVEIKPLVKDERVTEKKVVQPPKDLSVITKCTSTGKPSTEKLQSNAPEICINKDSAEKVSPGSPKRRKVMKTRIDERGREVTEVVWEGEETEPKKDDKDTTKKADTVAKKADTVAKKADNISTKAVNGAPATKKPPATSNTTGRGGSKKAGNIKDPKQGNILSFFKKKV