Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63395.t1 | XP_003596313.1 | 94.2 | 534 | 24 | 1 | 1 | 534 | 1 | 527 | 1.20E-250 | 875.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63395.t1 | Q15054 | 29.1 | 220 | 147 | 5 | 10 | 220 | 7 | 226 | 7.0e-13 | 77.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63395.t1 | G7ITE6 | 94.2 | 534 | 24 | 1 | 1 | 534 | 1 | 527 | 8.8e-251 | 875.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene63395 | 0.859944 | 2.91E-63 | -1.69E-46 |
MS.gene049368 | MS.gene63395 | 0.830982 | 2.16E-55 | -1.69E-46 |
MS.gene049807 | MS.gene63395 | 0.810602 | 1.06E-50 | -1.69E-46 |
MS.gene049821 | MS.gene63395 | 0.831891 | 1.29E-55 | -1.69E-46 |
MS.gene049850 | MS.gene63395 | 0.822721 | 2.04E-53 | -1.69E-46 |
MS.gene049983 | MS.gene63395 | 0.812654 | 3.80E-51 | -1.69E-46 |
MS.gene050551 | MS.gene63395 | 0.841586 | 4.34E-58 | -1.69E-46 |
MS.gene050646 | MS.gene63395 | 0.80311 | 4.08E-49 | -1.69E-46 |
MS.gene050654 | MS.gene63395 | 0.821808 | 3.32E-53 | -1.69E-46 |
MS.gene050689 | MS.gene63395 | 0.844763 | 6.18E-59 | -1.69E-46 |
MS.gene050759 | MS.gene63395 | 0.804649 | 1.95E-49 | -1.69E-46 |
MS.gene050838 | MS.gene63395 | 0.808284 | 3.34E-50 | -1.69E-46 |
MS.gene051003 | MS.gene63395 | 0.819047 | 1.43E-52 | -1.69E-46 |
MS.gene051029 | MS.gene63395 | 0.823721 | 1.19E-53 | -1.69E-46 |
MS.gene051234 | MS.gene63395 | 0.824299 | 8.70E-54 | -1.69E-46 |
MS.gene051328 | MS.gene63395 | 0.803713 | 3.06E-49 | -1.69E-46 |
MS.gene051343 | MS.gene63395 | 0.808503 | 3.00E-50 | -1.69E-46 |
MS.gene05157 | MS.gene63395 | 0.821303 | 4.34E-53 | -1.69E-46 |
MS.gene051676 | MS.gene63395 | 0.816967 | 4.21E-52 | -1.69E-46 |
MS.gene051700 | MS.gene63395 | 0.808016 | 3.81E-50 | -1.69E-46 |
MS.gene051719 | MS.gene63395 | 0.804965 | 1.68E-49 | -1.69E-46 |
MS.gene051720 | MS.gene63395 | 0.821308 | 4.33E-53 | -1.69E-46 |
MS.gene051744 | MS.gene63395 | 0.81815 | 2.28E-52 | -1.69E-46 |
MS.gene051975 | MS.gene63395 | 0.817196 | 3.74E-52 | -1.69E-46 |
MS.gene052016 | MS.gene63395 | 0.815119 | 1.09E-51 | -1.69E-46 |
MS.gene052168 | MS.gene63395 | 0.801267 | 9.76E-49 | -1.69E-46 |
MS.gene052307 | MS.gene63395 | 0.80905 | 2.29E-50 | -1.69E-46 |
MS.gene052335 | MS.gene63395 | 0.80435 | 2.25E-49 | -1.69E-46 |
MS.gene052342 | MS.gene63395 | 0.813394 | 2.62E-51 | -1.69E-46 |
MS.gene052434 | MS.gene63395 | 0.800859 | 1.18E-48 | -1.69E-46 |
MS.gene052463 | MS.gene63395 | 0.838146 | 3.42E-57 | -1.69E-46 |
MS.gene052516 | MS.gene63395 | 0.841418 | 4.81E-58 | -1.69E-46 |
MS.gene052609 | MS.gene63395 | 0.829359 | 5.38E-55 | -1.69E-46 |
MS.gene053058 | MS.gene63395 | 0.802584 | 5.23E-49 | -1.69E-46 |
MS.gene053079 | MS.gene63395 | 0.842099 | 3.18E-58 | -1.69E-46 |
MS.gene053122 | MS.gene63395 | 0.805763 | 1.14E-49 | -1.69E-46 |
MS.gene053226 | MS.gene63395 | 0.822554 | 2.23E-53 | -1.69E-46 |
MS.gene05350 | MS.gene63395 | 0.812005 | 5.27E-51 | -1.69E-46 |
MS.gene053581 | MS.gene63395 | 0.817389 | 3.38E-52 | -1.69E-46 |
MS.gene05364 | MS.gene63395 | 0.815999 | 6.93E-52 | -1.69E-46 |
MS.gene054139 | MS.gene63395 | 0.800741 | 1.25E-48 | -1.69E-46 |
MS.gene054178 | MS.gene63395 | 0.817168 | 3.79E-52 | -1.69E-46 |
MS.gene05458 | MS.gene63395 | 0.821172 | 4.65E-53 | -1.69E-46 |
MS.gene054651 | MS.gene63395 | 0.824519 | 7.72E-54 | -1.69E-46 |
MS.gene054775 | MS.gene63395 | 0.801162 | 1.03E-48 | -1.69E-46 |
MS.gene05517 | MS.gene63395 | 0.830618 | 2.65E-55 | -1.69E-46 |
MS.gene055311 | MS.gene63395 | 0.809401 | 1.93E-50 | -1.69E-46 |
MS.gene055313 | MS.gene63395 | 0.818056 | 2.39E-52 | -1.69E-46 |
MS.gene055465 | MS.gene63395 | 0.854324 | 1.33E-61 | -1.69E-46 |
MS.gene055466 | MS.gene63395 | 0.845157 | 4.84E-59 | -1.69E-46 |
MS.gene055468 | MS.gene63395 | 0.848248 | 6.92E-60 | -1.69E-46 |
MS.gene055469 | MS.gene63395 | 0.832828 | 7.57E-56 | -1.69E-46 |
MS.gene055513 | MS.gene63395 | 0.888415 | 6.02E-73 | -1.69E-46 |
MS.gene055580 | MS.gene63395 | -0.808935 | 2.43E-50 | -1.69E-46 |
MS.gene055864 | MS.gene63395 | 0.822098 | 2.84E-53 | -1.69E-46 |
MS.gene056045 | MS.gene63395 | 0.814596 | 1.42E-51 | -1.69E-46 |
MS.gene056174 | MS.gene63395 | 0.810109 | 1.36E-50 | -1.69E-46 |
MS.gene056181 | MS.gene63395 | 0.82983 | 4.13E-55 | -1.69E-46 |
MS.gene056215 | MS.gene63395 | 0.819204 | 1.31E-52 | -1.69E-46 |
MS.gene056308 | MS.gene63395 | 0.856941 | 2.29E-62 | -1.69E-46 |
MS.gene056390 | MS.gene63395 | 0.804376 | 2.23E-49 | -1.69E-46 |
MS.gene056507 | MS.gene63395 | 0.818847 | 1.58E-52 | -1.69E-46 |
MS.gene056509 | MS.gene63395 | 0.802405 | 5.70E-49 | -1.69E-46 |
MS.gene056699 | MS.gene63395 | 0.804562 | 2.03E-49 | -1.69E-46 |
MS.gene05686 | MS.gene63395 | 0.804118 | 2.52E-49 | -1.69E-46 |
MS.gene057034 | MS.gene63395 | 0.836533 | 8.85E-57 | -1.69E-46 |
MS.gene057102 | MS.gene63395 | 0.81525 | 1.02E-51 | -1.69E-46 |
MS.gene057294 | MS.gene63395 | 0.831904 | 1.28E-55 | -1.69E-46 |
MS.gene057693 | MS.gene63395 | 0.819535 | 1.10E-52 | -1.69E-46 |
MS.gene057915 | MS.gene63395 | 0.847101 | 1.43E-59 | -1.69E-46 |
MS.gene05847 | MS.gene63395 | 0.801262 | 9.78E-49 | -1.69E-46 |
MS.gene058649 | MS.gene63395 | 0.81608 | 6.65E-52 | -1.69E-46 |
MS.gene058668 | MS.gene63395 | 0.815162 | 1.06E-51 | -1.69E-46 |
MS.gene059170 | MS.gene63395 | 0.808398 | 3.16E-50 | -1.69E-46 |
MS.gene059725 | MS.gene63395 | 0.822297 | 2.55E-53 | -1.69E-46 |
MS.gene059778 | MS.gene63395 | 0.815567 | 8.65E-52 | -1.69E-46 |
MS.gene05978 | MS.gene63395 | 0.811813 | 5.80E-51 | -1.69E-46 |
MS.gene059842 | MS.gene63395 | 0.830721 | 2.50E-55 | -1.69E-46 |
MS.gene059965 | MS.gene63395 | 0.819081 | 1.40E-52 | -1.69E-46 |
MS.gene060219 | MS.gene63395 | 0.823039 | 1.72E-53 | -1.69E-46 |
MS.gene060365 | MS.gene63395 | 0.802685 | 4.99E-49 | -1.69E-46 |
MS.gene060587 | MS.gene63395 | 0.800011 | 1.76E-48 | -1.69E-46 |
MS.gene060637 | MS.gene63395 | 0.806321 | 8.71E-50 | -1.69E-46 |
MS.gene061006 | MS.gene63395 | 0.818236 | 2.18E-52 | -1.69E-46 |
MS.gene061100 | MS.gene63395 | 0.852371 | 4.82E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene04418 | MS.gene63395 | PPI |
MS.gene52656 | MS.gene63395 | PPI |
MS.gene017982 | MS.gene63395 | PPI |
MS.gene013296 | MS.gene63395 | PPI |
MS.gene40912 | MS.gene63395 | PPI |
MS.gene072401 | MS.gene63395 | PPI |
MS.gene63395 | MS.gene04620 | PPI |
MS.gene05640 | MS.gene63395 | PPI |
MS.gene049266 | MS.gene63395 | PPI |
MS.gene08109 | MS.gene63395 | PPI |
MS.gene04079 | MS.gene63395 | PPI |
MS.gene06380 | MS.gene63395 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63395.t1 | MTR_2g075820 | 94.757 | 534 | 20 | 2 | 1 | 534 | 1 | 526 | 0.0 | 1021 |
MS.gene63395.t1 | MTR_2g075820 | 93.633 | 534 | 27 | 1 | 1 | 534 | 1 | 527 | 0.0 | 999 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63395.t1 | AT1G78650 | 43.898 | 549 | 250 | 13 | 1 | 532 | 1 | 508 | 1.47e-116 | 354 |
Find 111 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGATTCGATTTCGTGAATT+AGG | 0.080211 | 2.4:+21592297 | None:intergenic |
GAGGTTCGTTGGCAAGCTTC+TGG | 0.168208 | 2.4:-21589038 | MS.gene63395:CDS |
TCCTTATTTATACAAATTTC+CGG | 0.231434 | 2.4:+21588420 | None:intergenic |
GTATCCTTGTCATCTTTCTT+TGG | 0.236749 | 2.4:+21588041 | None:intergenic |
TCCGGAAATTTGTATAAATA+AGG | 0.285503 | 2.4:-21588421 | MS.gene63395:CDS |
TGAAAGAATATTGCCCTGTT+TGG | 0.290751 | 2.4:+21587397 | None:intergenic |
GATAAAAGTGGCTCTGTTAA+TGG | 0.294110 | 2.4:-21589060 | MS.gene63395:CDS |
CTCTGCAACTTCTCAGTAGA+TGG | 0.294392 | 2.4:+21588450 | None:intergenic |
CTCTGGCACAGCGCAAGGCT+TGG | 0.297572 | 2.4:+21588996 | None:intergenic |
CTGCTTCATGAGCACAAGTT+TGG | 0.297917 | 2.4:+21588790 | None:intergenic |
TGTTATATGTAGGTTGCTTC+AGG | 0.309652 | 2.4:-21591943 | MS.gene63395:intron |
GTGATAACTGATAAATCTTT+TGG | 0.315080 | 2.4:+21588495 | None:intergenic |
GTGAATTAGGGATAGGGTTT+CGG | 0.334535 | 2.4:+21592310 | None:intergenic |
TCCCAAGCAATTATCAGCTT+TGG | 0.343926 | 2.4:+21590704 | None:intergenic |
AGATTCGATTTCGTGAATTA+GGG | 0.347776 | 2.4:+21592298 | None:intergenic |
TCTTTAGATGACAGTTTACT+AGG | 0.350822 | 2.4:+21588636 | None:intergenic |
TACCATGTAAGGCTTGTTAC+TGG | 0.354891 | 2.4:-21591843 | MS.gene63395:CDS |
CAAAGCACAGCTGCATCCTT+TGG | 0.355427 | 2.4:+21590771 | None:intergenic |
CTTCAGTAACTGAAGTAGTC+TGG | 0.361033 | 2.4:-21588082 | MS.gene63395:intron |
TATCATCAAATGAAGCAAAA+AGG | 0.364120 | 2.4:-21592083 | MS.gene63395:intron |
AGAAATTAAACCGTTGGTTA+AGG | 0.364213 | 2.4:-21588553 | MS.gene63395:CDS |
CACTAACCCGTTAACAGCTT+TGG | 0.369733 | 2.4:+21587950 | None:intergenic |
GAAAGAATATTGCCCTGTTT+GGG | 0.370990 | 2.4:+21587398 | None:intergenic |
TGGTGTATGCTTTGTCTGGC+TGG | 0.371747 | 2.4:-21591887 | MS.gene63395:CDS |
TCTGGCACAGCGCAAGGCTT+GGG | 0.374959 | 2.4:+21588997 | None:intergenic |
ATCACCAAGTGCACAAGTAC+TGG | 0.382003 | 2.4:-21588477 | MS.gene63395:CDS |
GTTACTGGGACAATGCTTGC+AGG | 0.384169 | 2.4:-21591828 | MS.gene63395:intron |
AGGTTCGTTGGCAAGCTTCT+GGG | 0.384533 | 2.4:-21589037 | MS.gene63395:CDS |
CAAAGGATGCAGCTGTGCTT+TGG | 0.395728 | 2.4:-21590770 | MS.gene63395:CDS |
AAACATAAAGGATCCCAAAC+AGG | 0.405833 | 2.4:-21587411 | MS.gene63395:CDS |
TGCTTCATGAGCACAAGTTT+GGG | 0.407375 | 2.4:+21588791 | None:intergenic |
TGAACAACATTACTCTTTGT+TGG | 0.409982 | 2.4:+21589273 | None:intergenic |
GCTGGTGGCTTCTTAGTTGC+CGG | 0.417944 | 2.4:+21587476 | None:intergenic |
TTCCAAAGCTGATAATTGCT+TGG | 0.418548 | 2.4:-21590706 | MS.gene63395:CDS |
GAAGTGGTGTATGCTTTGTC+TGG | 0.418622 | 2.4:-21591891 | MS.gene63395:CDS |
CCTGTTGGATGATCTTCTTA+AGG | 0.423040 | 2.4:+21588728 | None:intergenic |
TCCAAAGCTGATAATTGCTT+GGG | 0.428396 | 2.4:-21590705 | MS.gene63395:CDS |
AGTAAAATCTGTAGTAGGCT+TGG | 0.430762 | 2.4:-21589298 | MS.gene63395:CDS |
CCAGTAGTATTTGATGTAGC+TGG | 0.432970 | 2.4:+21587458 | None:intergenic |
CGATTTCGTGAATTAGGGAT+AGG | 0.433982 | 2.4:+21592303 | None:intergenic |
ATATCTACCAAAGCTGTTAA+CGG | 0.434286 | 2.4:-21587957 | MS.gene63395:CDS |
TTGTGCTCATGAAGCAGTAC+TGG | 0.437428 | 2.4:-21588784 | MS.gene63395:CDS |
TATCTACCAAAGCTGTTAAC+GGG | 0.445062 | 2.4:-21587956 | MS.gene63395:intron |
GTAAAATCTGTAGTAGGCTT+GGG | 0.450654 | 2.4:-21589297 | MS.gene63395:CDS |
GAAGATCATCCAACAGGAAA+AGG | 0.454467 | 2.4:-21588722 | MS.gene63395:CDS |
ATAATTGCTTGGGAGACAAT+AGG | 0.464445 | 2.4:-21590695 | MS.gene63395:intron |
CCAGAAGTAAAATCTGTAGT+AGG | 0.467548 | 2.4:-21589303 | MS.gene63395:CDS |
CAAGAAAGCAGGAAACATAA+AGG | 0.467823 | 2.4:-21587423 | MS.gene63395:CDS |
AAATAAGGATAGTGCAGAAA+AGG | 0.468660 | 2.4:-21588406 | MS.gene63395:CDS |
GTATTCCTAGCTACCATGTA+AGG | 0.471927 | 2.4:-21591854 | MS.gene63395:CDS |
AAGGAACGAGGATGGACAAC+CGG | 0.480561 | 2.4:-21589340 | MS.gene63395:CDS |
TTTCTCCTCTTAGGTGAACC+TGG | 0.487423 | 2.4:+21588378 | None:intergenic |
CCAGCTACATCAAATACTAC+TGG | 0.487443 | 2.4:-21587458 | MS.gene63395:CDS |
GGAGAAAAGTGATGAAGACT+AGG | 0.493998 | 2.4:-21588362 | MS.gene63395:CDS |
CTCTGTTAATGGAGGTTCGT+TGG | 0.494085 | 2.4:-21589049 | MS.gene63395:CDS |
CCTTAAGAAGATCATCCAAC+AGG | 0.498177 | 2.4:-21588728 | MS.gene63395:CDS |
GAAGCACAGGAAGAGTTTGA+TGG | 0.504579 | 2.4:-21590834 | MS.gene63395:CDS |
TTCAGTAACTGAAGTAGTCT+GGG | 0.507974 | 2.4:-21588081 | MS.gene63395:intron |
TTTCCCAGTACTTGTGCACT+TGG | 0.512191 | 2.4:+21588473 | None:intergenic |
ACCGGTAGAAATTAAACCGT+TGG | 0.513407 | 2.4:-21588559 | MS.gene63395:CDS |
TCTCTCCAGGTTCACCTAAG+AGG | 0.514966 | 2.4:-21588383 | MS.gene63395:CDS |
AGCAATGGTACAGGAAATGC+AGG | 0.517649 | 2.4:-21589165 | MS.gene63395:CDS |
ACCAACGGTTTAATTTCTAC+CGG | 0.517859 | 2.4:+21588558 | None:intergenic |
AACATGATTTCAAAACCTGC+AGG | 0.524551 | 2.4:-21588964 | MS.gene63395:intron |
AGAGGAGGAAGCAAGAAAGC+AGG | 0.527546 | 2.4:-21587434 | MS.gene63395:CDS |
GATTTCGTGAATTAGGGATA+GGG | 0.531861 | 2.4:+21592304 | None:intergenic |
TCATTGCATTTCCAGCGCAC+CGG | 0.539369 | 2.4:-21587495 | MS.gene63395:intron |
GGTTCGTTGGCAAGCTTCTG+GGG | 0.540265 | 2.4:-21589036 | MS.gene63395:CDS |
ACAAGCCTTACATGGTAGCT+AGG | 0.543674 | 2.4:+21591849 | None:intergenic |
AGGGTTTCGGTGTTCGACAT+CGG | 0.547592 | 2.4:+21592323 | None:intergenic |
TCTGGAGTGGCAGAAACTGC+CGG | 0.547602 | 2.4:+21589321 | None:intergenic |
AATTTCAGGTTTCATACAAG+TGG | 0.549313 | 2.4:-21592125 | MS.gene63395:intron |
AAGAGTGAAAGCAATGGTAC+AGG | 0.550651 | 2.4:-21589174 | MS.gene63395:CDS |
AGTGCAGAAAAGGTCTCTCC+AGG | 0.552042 | 2.4:-21588396 | MS.gene63395:CDS |
ACATCAAATACTACTGGAAG+AGG | 0.555136 | 2.4:-21587452 | MS.gene63395:CDS |
AAGTCTCTTCCCTTGCCCGC+AGG | 0.555927 | 2.4:-21589102 | MS.gene63395:CDS |
TAACTGAAGTAGTCTGGGAG+GGG | 0.560193 | 2.4:-21588076 | MS.gene63395:CDS |
CAAGCCTTGCGCTGTGCCAG+AGG | 0.561439 | 2.4:-21588995 | MS.gene63395:CDS |
CGTCTCAGATCAACTTCAAG+TGG | 0.561762 | 2.4:-21592273 | MS.gene63395:intron |
CTTTAGATGACAGTTTACTA+GGG | 0.562262 | 2.4:+21588637 | None:intergenic |
ACCATGTAAGGCTTGTTACT+GGG | 0.562390 | 2.4:-21591842 | MS.gene63395:CDS |
AAGCACAGGAAGAGTTTGAT+GGG | 0.563128 | 2.4:-21590833 | MS.gene63395:CDS |
TGATCTCAAAACACAGAATG+TGG | 0.563793 | 2.4:-21589208 | MS.gene63395:CDS |
TACAACTAAGAAAGCTGATA+CGG | 0.567031 | 2.4:-21588021 | MS.gene63395:CDS |
TCCCAGTAACAAGCCTTACA+TGG | 0.567820 | 2.4:+21591841 | None:intergenic |
TAGCTTGCACACTATATACC+TGG | 0.568621 | 2.4:+21590799 | None:intergenic |
TGATGGGAAATGCTCAGTCC+AGG | 0.568705 | 2.4:-21590817 | MS.gene63395:CDS |
GAAGTTGCAGAGCAATGCTC+CGG | 0.570583 | 2.4:-21588439 | MS.gene63395:CDS |
TCACCAAGTGCACAAGTACT+GGG | 0.574444 | 2.4:-21588476 | MS.gene63395:CDS |
AACTGAAGTAGTCTGGGAGG+GGG | 0.575395 | 2.4:-21588075 | MS.gene63395:CDS |
GATCATCCAACAGGAAAAGG+AGG | 0.581341 | 2.4:-21588719 | MS.gene63395:CDS |
GTAGTATTTGATGTAGCTGG+TGG | 0.582098 | 2.4:+21587461 | None:intergenic |
ACATGAGGATGGGTTGGAAG+TGG | 0.582631 | 2.4:-21591907 | MS.gene63395:CDS |
AAAGGACAAGCTGATAAAAG+TGG | 0.583030 | 2.4:-21589072 | MS.gene63395:CDS |
GGTTGCAAAGAAAGCTGATA+CGG | 0.587765 | 2.4:-21588000 | MS.gene63395:CDS |
ATTGATGAACGAGGAAGAGA+AGG | 0.588930 | 2.4:-21588339 | MS.gene63395:intron |
GTAACTGAAGTAGTCTGGGA+GGG | 0.592954 | 2.4:-21588077 | MS.gene63395:CDS |
AACATAAAGGATCCCAAACA+GGG | 0.599044 | 2.4:-21587410 | MS.gene63395:CDS |
ACTCTCTCATCCTTAACCAA+CGG | 0.611531 | 2.4:+21588543 | None:intergenic |
TCAAATACTACTGGAAGAGG+AGG | 0.613938 | 2.4:-21587449 | MS.gene63395:CDS |
TGTGCTCATGAAGCAGTACT+GGG | 0.619552 | 2.4:-21588783 | MS.gene63395:CDS |
TGTGCAAGCTAGTATTCCAA+AGG | 0.641371 | 2.4:-21590787 | MS.gene63395:CDS |
AAAAGTGGCTCTGTTAATGG+AGG | 0.643109 | 2.4:-21589057 | MS.gene63395:CDS |
AGAGCCAAAGAAAGATGACA+AGG | 0.649680 | 2.4:-21588045 | MS.gene63395:CDS |
ATCATCCAACAGGAAAAGGA+GGG | 0.654162 | 2.4:-21588718 | MS.gene63395:CDS |
AGTGATGACGATGATAATCA+AGG | 0.657684 | 2.4:-21588756 | MS.gene63395:CDS |
GATGTCAAGAGTGAAAGCAA+TGG | 0.672437 | 2.4:-21589180 | MS.gene63395:CDS |
CATCAGTTTAGCATCAGATG+AGG | 0.673654 | 2.4:-21588661 | MS.gene63395:CDS |
TGATACGGTTGCAAAGAAAG+CGG | 0.688933 | 2.4:-21587985 | MS.gene63395:CDS |
AGTAACTGAAGTAGTCTGGG+AGG | 0.694022 | 2.4:-21588078 | MS.gene63395:CDS |
AAGACTAGGATTGATGAACG+AGG | 0.746915 | 2.4:-21588348 | MS.gene63395:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATATATTCAATAAAC+CGG | + | chr2.4:21590770-21590789 | None:intergenic | 10.0% |
!!! | AAATATTAGATTGATTATTT+TGG | + | chr2.4:21590085-21590104 | None:intergenic | 10.0% |
!!! | GATATAATATAATATGATTT+TGG | - | chr2.4:21589776-21589795 | MS.gene63395:intron | 10.0% |
!! | ATGTTCAGTTAAAAAAAAAT+TGG | - | chr2.4:21588732-21588751 | MS.gene63395:CDS | 15.0% |
!! | TATAATAATTATAGTTGTAG+CGG | - | chr2.4:21587910-21587929 | MS.gene63395:intron | 15.0% |
!!! | AACAAATTTAGGATAAAAAA+AGG | + | chr2.4:21587530-21587549 | None:intergenic | 15.0% |
!!! | AATTATGTCAGTAAATTTTT+TGG | + | chr2.4:21590859-21590878 | None:intergenic | 15.0% |
!!! | AGTATTTTAGTTTTTTGATA+AGG | - | chr2.4:21589053-21589072 | MS.gene63395:CDS | 15.0% |
!!! | TAATTTTTATCTCATAAACT+TGG | - | chr2.4:21588362-21588381 | MS.gene63395:CDS | 15.0% |
!!! | TATTAGTCTATTAGAATATA+TGG | - | chr2.4:21589096-21589115 | MS.gene63395:CDS | 15.0% |
!!! | TTGAAAATTTTGTTATATGT+AGG | - | chr2.4:21587743-21587762 | MS.gene63395:intron | 15.0% |
!!! | TTTTAATATATCATGAAATC+AGG | + | chr2.4:21591943-21591962 | None:intergenic | 15.0% |
!!! | TTTTTTTATGAACACTAAAT+TGG | + | chr2.4:21589620-21589639 | None:intergenic | 15.0% |
!! | AACTAACTCAATTTAGATTT+AGG | - | chr2.4:21588668-21588687 | MS.gene63395:CDS | 20.0% |
!! | AATCTAATATTTCAATCTTC+TGG | - | chr2.4:21590093-21590112 | MS.gene63395:intron | 20.0% |
!! | ACATGAAAGAAACATTATTA+GGG | + | chr2.4:21589493-21589512 | None:intergenic | 20.0% |
!! | ACTTATATATGCATGATTAT+CGG | - | chr2.4:21591512-21591531 | MS.gene63395:intron | 20.0% |
!! | AGTTAAAACAATGCATTTAA+GGG | + | chr2.4:21591385-21591404 | None:intergenic | 20.0% |
!! | CATATTATAGTCATACATAA+AGG | + | chr2.4:21591446-21591465 | None:intergenic | 20.0% |
!! | GGGAAAAAAATTACAATTAA+TGG | + | chr2.4:21588275-21588294 | None:intergenic | 20.0% |
!! | TCATGAAATCAAACAAATTT+AGG | + | chr2.4:21587541-21587560 | None:intergenic | 20.0% |
!! | TCTGATATTAAAATGTAGAA+TGG | - | chr2.4:21589754-21589773 | MS.gene63395:intron | 20.0% |
!!! | AAGTTTTAAAATGTTATTGC+TGG | + | chr2.4:21592045-21592064 | None:intergenic | 20.0% |
!!! | ATGAAAATTGGTTTAATTTC+AGG | - | chr2.4:21587557-21587576 | MS.gene63395:intron | 20.0% |
!!! | GAATTGAATGAATGAAATTT+TGG | - | chr2.4:21591783-21591802 | MS.gene63395:intron | 20.0% |
!!! | TCCTTATTTATACAAATTTC+CGG | + | chr2.4:21591279-21591298 | None:intergenic | 20.0% |
!!! | TTGTTTGATTTCATGAAAAT+TGG | - | chr2.4:21587545-21587564 | MS.gene63395:intron | 20.0% |
! | AACTCAATTTAGATTTAGGT+GGG | - | chr2.4:21588672-21588691 | MS.gene63395:CDS | 25.0% |
! | ATAAGAAAATAGCACAACAA+GGG | + | chr2.4:21589710-21589729 | None:intergenic | 25.0% |
! | ATAATATGGAAAAAAGAACC+TGG | + | chr2.4:21591410-21591429 | None:intergenic | 25.0% |
! | ATATATTCAATAAACCGGAA+TGG | + | chr2.4:21590765-21590784 | None:intergenic | 25.0% |
! | CACATGAAAGAAACATTATT+AGG | + | chr2.4:21589494-21589513 | None:intergenic | 25.0% |
! | CTTATATATGCATGATTATC+GGG | - | chr2.4:21591513-21591532 | MS.gene63395:intron | 25.0% |
! | CTTCATTAATGAAGTTATTG+AGG | + | chr2.4:21590151-21590170 | None:intergenic | 25.0% |
! | GAACTAATAGTCATACATAA+AGG | + | chr2.4:21591551-21591570 | None:intergenic | 25.0% |
! | GAGTTAAAACAATGCATTTA+AGG | + | chr2.4:21591386-21591405 | None:intergenic | 25.0% |
! | GATAATTTGAGTAAATGTCT+TGG | - | chr2.4:21588002-21588021 | MS.gene63395:CDS | 25.0% |
! | TAACTCAATTTAGATTTAGG+TGG | - | chr2.4:21588671-21588690 | MS.gene63395:CDS | 25.0% |
! | TATAACTATAATCATCGAGA+AGG | + | chr2.4:21590808-21590827 | None:intergenic | 25.0% |
! | TATCATCAAATGAAGCAAAA+AGG | - | chr2.4:21587613-21587632 | MS.gene63395:intron | 25.0% |
! | TATGAGCAATTCATGAATAT+AGG | - | chr2.4:21591978-21591997 | MS.gene63395:intron | 25.0% |
! | TCCGGAAATTTGTATAAATA+AGG | - | chr2.4:21591275-21591294 | MS.gene63395:intron | 25.0% |
! | TTGAAAACAAACATAACTGA+TGG | - | chr2.4:21588463-21588482 | MS.gene63395:CDS | 25.0% |
!! | ATAACTGATAAATCTTTTGG+TGG | + | chr2.4:21591201-21591220 | None:intergenic | 25.0% |
!! | CTCTAATTCTTTTGTACAAA+GGG | - | chr2.4:21590329-21590348 | MS.gene63395:intron | 25.0% |
!! | GAACTGACAAATTTTCTTTT+TGG | - | chr2.4:21589234-21589253 | MS.gene63395:CDS | 25.0% |
!! | GTACTTTCAATCTGATTTTA+TGG | - | chr2.4:21592088-21592107 | MS.gene63395:CDS | 25.0% |
!! | GTGATAACTGATAAATCTTT+TGG | + | chr2.4:21591204-21591223 | None:intergenic | 25.0% |
!! | TCTCTAATTCTTTTGTACAA+AGG | - | chr2.4:21590328-21590347 | MS.gene63395:intron | 25.0% |
!! | TGAAATTTTCGTAAAGAACT+AGG | + | chr2.4:21591493-21591512 | None:intergenic | 25.0% |
!!! | AAGGCTTTGAAATTGAAAAT+TGG | + | chr2.4:21587511-21587530 | None:intergenic | 25.0% |
!!! | AGGCTTTGAAATTGAAAATT+GGG | + | chr2.4:21587510-21587529 | None:intergenic | 25.0% |
!!! | ATTGATGGGTTTTTTTACTA+TGG | - | chr2.4:21587702-21587721 | MS.gene63395:intron | 25.0% |
!!! | GAAATTTTTTCTCAACTCAT+TGG | + | chr2.4:21588770-21588789 | None:intergenic | 25.0% |
!!! | TGACTTTTTGTCATTTTGTT+TGG | + | chr2.4:21591088-21591107 | None:intergenic | 25.0% |
!!! | TGCTTTGAATTTTGATTTAC+CGG | - | chr2.4:21591119-21591138 | MS.gene63395:intron | 25.0% |
!!! | TTATTTCTAAAGTTGCTTGA+AGG | - | chr2.4:21591903-21591922 | MS.gene63395:CDS | 25.0% |
!!! | TTTAGTTTTATGCAGTTGAT+GGG | - | chr2.4:21587643-21587662 | MS.gene63395:intron | 25.0% |
!!! | TTTTAGTTTTATGCAGTTGA+TGG | - | chr2.4:21587642-21587661 | MS.gene63395:intron | 25.0% |
AAATAAGGATAGTGCAGAAA+AGG | - | chr2.4:21591290-21591309 | MS.gene63395:intron | 30.0% | |
AACGTTACCCAAAAAATTTC+TGG | + | chr2.4:21589316-21589335 | None:intergenic | 30.0% | |
AAGCAAGTCATGATATTAGT+AGG | - | chr2.4:21589140-21589159 | MS.gene63395:CDS | 30.0% | |
AATTGACCATACCAAAATGA+TGG | + | chr2.4:21588621-21588640 | None:intergenic | 30.0% | |
AGAATCACAGTATACTTCAA+GGG | + | chr2.4:21591853-21591872 | None:intergenic | 30.0% | |
AGATTCGATTTCGTGAATTA+GGG | + | chr2.4:21587401-21587420 | None:intergenic | 30.0% | |
AGTATACTGTGATTCTCATT+AGG | - | chr2.4:21591857-21591876 | MS.gene63395:CDS | 30.0% | |
AGTCATACATAAAGGTGATA+AGG | + | chr2.4:21591543-21591562 | None:intergenic | 30.0% | |
ATAGCAGTAGTTATGTAACA+TGG | - | chr2.4:21590828-21590847 | MS.gene63395:CDS | 30.0% | |
ATATCTACCAAAGCTGTTAA+CGG | - | chr2.4:21591739-21591758 | MS.gene63395:intron | 30.0% | |
ATCAAATGAAGCAAAAAGGT+TGG | - | chr2.4:21587617-21587636 | MS.gene63395:intron | 30.0% | |
ATTGACCATACCAAAATGAT+GGG | + | chr2.4:21588620-21588639 | None:intergenic | 30.0% | |
CTATTACATGTTCCAAAACT+TGG | - | chr2.4:21589458-21589477 | MS.gene63395:intron | 30.0% | |
CTTTAGATGACAGTTTACTA+GGG | + | chr2.4:21591062-21591081 | None:intergenic | 30.0% | |
GAAAAAATTTCATGTCACTC+TGG | - | chr2.4:21588779-21588798 | MS.gene63395:CDS | 30.0% | |
GATAAGAAAATAGCACAACA+AGG | + | chr2.4:21589711-21589730 | None:intergenic | 30.0% | |
GGAAATTGAAGAGATTTGAT+TGG | + | chr2.4:21587472-21587491 | None:intergenic | 30.0% | |
GTAATAGTGATAGATTGTCT+TGG | + | chr2.4:21589445-21589464 | None:intergenic | 30.0% | |
GTGACTTCTACACTATAATA+TGG | + | chr2.4:21591424-21591443 | None:intergenic | 30.0% | |
TAAGAAAATAGCACAACAAG+GGG | + | chr2.4:21589709-21589728 | None:intergenic | 30.0% | |
TACAACTAAGAAAGCTGATA+CGG | - | chr2.4:21591675-21591694 | MS.gene63395:intron | 30.0% | |
TATTAGACATGCCTTCAATT+AGG | - | chr2.4:21588207-21588226 | MS.gene63395:intron | 30.0% | |
TCAAATGAAGCAAAAAGGTT+GGG | - | chr2.4:21587618-21587637 | MS.gene63395:intron | 30.0% | |
TCTTTAGATGACAGTTTACT+AGG | + | chr2.4:21591063-21591082 | None:intergenic | 30.0% | |
TCTTTCATGTGACCAAAAAA+TGG | - | chr2.4:21589503-21589522 | MS.gene63395:intron | 30.0% | |
TGAAAGAAACATTATTAGGG+AGG | + | chr2.4:21589490-21589509 | None:intergenic | 30.0% | |
TGAACAACATTACTCTTTGT+TGG | + | chr2.4:21590426-21590445 | None:intergenic | 30.0% | |
TGAGTTTATGCTTGTTTGTT+TGG | - | chr2.4:21588413-21588432 | MS.gene63395:CDS | 30.0% | |
TGTCAGTGTTGTATTATTGT+CGG | - | chr2.4:21588183-21588202 | MS.gene63395:intron | 30.0% | |
TTCATGTCATGGTTTCATAT+AGG | + | chr2.4:21588577-21588596 | None:intergenic | 30.0% | |
TTGTTGAAAAACATGAGGAT+GGG | - | chr2.4:21587779-21587798 | MS.gene63395:intron | 30.0% | |
TTTAAGTGTCAGTGCTATAT+AGG | - | chr2.4:21588062-21588081 | MS.gene63395:CDS | 30.0% | |
TTTCTGTGAATTGCTTTAGT+AGG | - | chr2.4:21589334-21589353 | MS.gene63395:CDS | 30.0% | |
TTTGTTGAAAAACATGAGGA+TGG | - | chr2.4:21587778-21587797 | MS.gene63395:intron | 30.0% | |
! | AAATCAGATTGAAAGTACAG+TGG | + | chr2.4:21592086-21592105 | None:intergenic | 30.0% |
! | AATCAGATTGAAAGTACAGT+GGG | + | chr2.4:21592085-21592104 | None:intergenic | 30.0% |
! | AGAAATTAAACCGTTGGTTA+AGG | - | chr2.4:21591143-21591162 | MS.gene63395:intron | 30.0% |
! | ATCATGTTACTATTTTCCTC+TGG | + | chr2.4:21590720-21590739 | None:intergenic | 30.0% |
! | CTTTTGTACAAAGGGTAAAA+AGG | - | chr2.4:21590337-21590356 | MS.gene63395:intron | 30.0% |
! | GAATTGTGTGCTATGTTTTT+AGG | + | chr2.4:21590456-21590475 | None:intergenic | 30.0% |
! | TTTTGTAGCCAGAAAAAAAG+TGG | - | chr2.4:21590008-21590027 | MS.gene63395:intron | 30.0% |
!! | AATTTCAGGTTTCATACAAG+TGG | - | chr2.4:21587571-21587590 | MS.gene63395:intron | 30.0% |
!! | ACTAATATCATGACTTGCTT+GGG | + | chr2.4:21589140-21589159 | None:intergenic | 30.0% |
!! | GCTTTGAAATTGAAAATTGG+GGG | + | chr2.4:21587508-21587527 | None:intergenic | 30.0% |
!! | GGCTTTGAAATTGAAAATTG+GGG | + | chr2.4:21587509-21587528 | None:intergenic | 30.0% |
!! | GTGTTTTCTTCATAGTTTTG+TGG | - | chr2.4:21588386-21588405 | MS.gene63395:CDS | 30.0% |
!! | TACTAATATCATGACTTGCT+TGG | + | chr2.4:21589141-21589160 | None:intergenic | 30.0% |
!! | TGTTGCTTTGTGAAATTGAT+GGG | - | chr2.4:21587688-21587707 | MS.gene63395:intron | 30.0% |
!! | TTGTTGCTTTGTGAAATTGA+TGG | - | chr2.4:21587687-21587706 | MS.gene63395:intron | 30.0% |
!!! | ACAAGAGACCAGAAATTTTT+TGG | - | chr2.4:21589305-21589324 | MS.gene63395:CDS | 30.0% |
!!! | CAAGAGACCAGAAATTTTTT+GGG | - | chr2.4:21589306-21589325 | MS.gene63395:CDS | 30.0% |
AAACATAAAGGATCCCAAAC+AGG | - | chr2.4:21592285-21592304 | MS.gene63395:CDS | 35.0% | |
AAAGGACAAGCTGATAAAAG+TGG | - | chr2.4:21590624-21590643 | MS.gene63395:intron | 35.0% | |
AACATAAAGGATCCCAAACA+GGG | - | chr2.4:21592286-21592305 | MS.gene63395:CDS | 35.0% | |
AACATGATTTCAAAACCTGC+AGG | - | chr2.4:21590732-21590751 | MS.gene63395:CDS | 35.0% | |
AACCATGACATGAACCAATT+TGG | - | chr2.4:21588583-21588602 | MS.gene63395:CDS | 35.0% | |
ACATCAAATACTACTGGAAG+AGG | - | chr2.4:21592244-21592263 | MS.gene63395:intron | 35.0% | |
AGTAAAATCTGTAGTAGGCT+TGG | - | chr2.4:21590398-21590417 | MS.gene63395:intron | 35.0% | |
ATAATTGCTTGGGAGACAAT+AGG | - | chr2.4:21589001-21589020 | MS.gene63395:CDS | 35.0% | |
ATTAGTGTTGTAATCGCCAT+TGG | + | chr2.4:21589269-21589288 | None:intergenic | 35.0% | |
ATTTGTCAGTTCAGTATGAG+TGG | + | chr2.4:21589226-21589245 | None:intergenic | 35.0% | |
CAAGAAAGCAGGAAACATAA+AGG | - | chr2.4:21592273-21592292 | MS.gene63395:intron | 35.0% | |
CATATTCCAAAAGCAGAAGA+TGG | + | chr2.4:21589571-21589590 | None:intergenic | 35.0% | |
CCAGAAGTAAAATCTGTAGT+AGG | - | chr2.4:21590393-21590412 | MS.gene63395:intron | 35.0% | |
CCTACTTCCTAATGTTTGTA+AGG | + | chr2.4:21588809-21588828 | None:intergenic | 35.0% | |
CCTGTACAAAAAGATGCTAA+AGG | + | chr2.4:21588525-21588544 | None:intergenic | 35.0% | |
CCTTACAAACATTAGGAAGT+AGG | - | chr2.4:21588806-21588825 | MS.gene63395:CDS | 35.0% | |
CTGTCTTATATGTGTCTTTG+CGG | - | chr2.4:21590256-21590275 | MS.gene63395:intron | 35.0% | |
GAAAGAATATTGCCCTGTTT+GGG | + | chr2.4:21592301-21592320 | None:intergenic | 35.0% | |
GAGAATCACAGTATACTTCA+AGG | + | chr2.4:21591854-21591873 | None:intergenic | 35.0% | |
GAGATTCGATTTCGTGAATT+AGG | + | chr2.4:21587402-21587421 | None:intergenic | 35.0% | |
GATTTCGTGAATTAGGGATA+GGG | + | chr2.4:21587395-21587414 | None:intergenic | 35.0% | |
GGAAGCAATCAATACTTCAA+AGG | - | chr2.4:21591804-21591823 | MS.gene63395:intron | 35.0% | |
GTAAAATCTGTAGTAGGCTT+GGG | - | chr2.4:21590399-21590418 | MS.gene63395:intron | 35.0% | |
GTATCCTTGTCATCTTTCTT+TGG | + | chr2.4:21591658-21591677 | None:intergenic | 35.0% | |
TATCTACCAAAGCTGTTAAC+GGG | - | chr2.4:21591740-21591759 | MS.gene63395:intron | 35.0% | |
TCCAAAGCTGATAATTGCTT+GGG | - | chr2.4:21588991-21589010 | MS.gene63395:CDS | 35.0% | |
TGAAAGAATATTGCCCTGTT+TGG | + | chr2.4:21592302-21592321 | None:intergenic | 35.0% | |
TGAACTATGAAGGTTAGACA+CGG | - | chr2.4:21587939-21587958 | MS.gene63395:intron | 35.0% | |
TGATCTCAAAACACAGAATG+TGG | - | chr2.4:21590488-21590507 | MS.gene63395:intron | 35.0% | |
TGTACAGGAACTGAAGTAAT+TGG | - | chr2.4:21588537-21588556 | MS.gene63395:CDS | 35.0% | |
TGTTATATGTAGGTTGCTTC+AGG | - | chr2.4:21587753-21587772 | MS.gene63395:intron | 35.0% | |
TTCAGTAACTGAAGTAGTCT+GGG | - | chr2.4:21591615-21591634 | MS.gene63395:intron | 35.0% | |
TTCCAAAGCTGATAATTGCT+TGG | - | chr2.4:21588990-21589009 | MS.gene63395:CDS | 35.0% | |
! | AAGAATTTTCTTTTACCGCC+AGG | - | chr2.4:21590195-21590214 | MS.gene63395:intron | 35.0% |
! | ACAAACATAACTGATGGTGA+TGG | - | chr2.4:21588469-21588488 | MS.gene63395:CDS | 35.0% |
! | ACAGTGAAGTATTAAGCAGT+AGG | + | chr2.4:21588296-21588315 | None:intergenic | 35.0% |
! | ACCAACGGTTTAATTTCTAC+CGG | + | chr2.4:21591141-21591160 | None:intergenic | 35.0% |
! | AGTGATGACGATGATAATCA+AGG | - | chr2.4:21590940-21590959 | MS.gene63395:intron | 35.0% |
! | ATCAGATTGAAAGTACAGTG+GGG | + | chr2.4:21592084-21592103 | None:intergenic | 35.0% |
! | CAGTGAAGTATTAAGCAGTA+GGG | + | chr2.4:21588295-21588314 | None:intergenic | 35.0% |
! | CCTACTACAGATTTTACTTC+TGG | + | chr2.4:21590396-21590415 | None:intergenic | 35.0% |
! | CCTTTAGCATCTTTTTGTAC+AGG | - | chr2.4:21588522-21588541 | MS.gene63395:CDS | 35.0% |
! | GACTTTTCTTTCTCTGCAAT+AGG | + | chr2.4:21590579-21590598 | None:intergenic | 35.0% |
! | GATAAAAGTGGCTCTGTTAA+TGG | - | chr2.4:21590636-21590655 | MS.gene63395:intron | 35.0% |
! | GGCTAACTAGCATATTTTTC+AGG | - | chr2.4:21590295-21590314 | MS.gene63395:intron | 35.0% |
! | GTTTTTCTGACCCATCATTT+TGG | - | chr2.4:21588607-21588626 | MS.gene63395:CDS | 35.0% |
!! | AAAGCTGCTTTGAAAAGTAG+GGG | - | chr2.4:21589898-21589917 | MS.gene63395:intron | 35.0% |
!! | AGAAAGCTGCTTTGAAAAGT+AGG | - | chr2.4:21589896-21589915 | MS.gene63395:intron | 35.0% |
!! | CACTGATTCAGAAGCTTTAT+TGG | + | chr2.4:21589969-21589988 | None:intergenic | 35.0% |
!! | CTAATATCATGACTTGCTTG+GGG | + | chr2.4:21589139-21589158 | None:intergenic | 35.0% |
!! | CTGATAAATCTTTTGGTGGT+TGG | + | chr2.4:21591197-21591216 | None:intergenic | 35.0% |
!! | GAAAGCTGCTTTGAAAAGTA+GGG | - | chr2.4:21589897-21589916 | MS.gene63395:intron | 35.0% |
!! | GGAGTTTGTTGAAAAACATG+AGG | - | chr2.4:21587774-21587793 | MS.gene63395:intron | 35.0% |
!! | TAAATGTCTTGGTGTCGTAT+TGG | - | chr2.4:21588013-21588032 | MS.gene63395:CDS | 35.0% |
!! | TAATATCATGACTTGCTTGG+GGG | + | chr2.4:21589138-21589157 | None:intergenic | 35.0% |
!! | TACAGATTTTACTTCTGGAG+TGG | + | chr2.4:21590391-21590410 | None:intergenic | 35.0% |
!! | TCTTTCCATTGCTTTTGTGT+GGG | - | chr2.4:21589653-21589672 | MS.gene63395:intron | 35.0% |
!! | TTCATCACTTTTCTCCTCTT+AGG | + | chr2.4:21591330-21591349 | None:intergenic | 35.0% |
!!! | ACTGACACTGAACCATTTTT+TGG | + | chr2.4:21589518-21589537 | None:intergenic | 35.0% |
!!! | AGCATATTTTTCAGGTTCTG+TGG | - | chr2.4:21590303-21590322 | MS.gene63395:intron | 35.0% |
!!! | ATGCATTGTTTTAACTCACC+AGG | - | chr2.4:21591389-21591408 | MS.gene63395:intron | 35.0% |
!!! | CATTTTTTATGCAGAAGCAC+AGG | - | chr2.4:21588849-21588868 | MS.gene63395:intron | 35.0% |
!!! | GCATATTTTTCAGGTTCTGT+GGG | - | chr2.4:21590304-21590323 | MS.gene63395:intron | 35.0% |
!!! | TCAAACCACCACTTTTTTTC+TGG | + | chr2.4:21590019-21590038 | None:intergenic | 35.0% |
!!! | TTGTGTGCTATGTTTTTAGG+AGG | + | chr2.4:21590453-21590472 | None:intergenic | 35.0% |
!!! | TTTTTGGTTCTCTTTGCCAA+TGG | - | chr2.4:21589250-21589269 | MS.gene63395:CDS | 35.0% |
AAATATGCTAGTTAGCCACC+AGG | + | chr2.4:21590292-21590311 | None:intergenic | 40.0% | |
AAATTGGGGGAAGAGAAGTA+AGG | + | chr2.4:21587495-21587514 | None:intergenic | 40.0% | |
AAGACTAGGATTGATGAACG+AGG | - | chr2.4:21591348-21591367 | MS.gene63395:intron | 40.0% | |
AAGAGTGAAAGCAATGGTAC+AGG | - | chr2.4:21590522-21590541 | MS.gene63395:intron | 40.0% | |
AAGCACAGGAAGAGTTTGAT+GGG | - | chr2.4:21588863-21588882 | MS.gene63395:intron | 40.0% | |
AATGTTATTGCTGGCCAAAG+TGG | + | chr2.4:21592036-21592055 | None:intergenic | 40.0% | |
AATTGGGGGAAGAGAAGTAA+GGG | + | chr2.4:21587494-21587513 | None:intergenic | 40.0% | |
ACAAAGGGTAAAAAGGAACG+AGG | - | chr2.4:21590344-21590363 | MS.gene63395:intron | 40.0% | |
ACCGGTAGAAATTAAACCGT+TGG | - | chr2.4:21591137-21591156 | MS.gene63395:intron | 40.0% | |
ACTCTCTCATCCTTAACCAA+CGG | + | chr2.4:21591156-21591175 | None:intergenic | 40.0% | |
AGAGCCAAAGAAAGATGACA+AGG | - | chr2.4:21591651-21591670 | MS.gene63395:intron | 40.0% | |
ATCATCCAACAGGAAAAGGA+GGG | - | chr2.4:21590978-21590997 | MS.gene63395:intron | 40.0% | |
CATCAGTTTAGCATCAGATG+AGG | - | chr2.4:21591035-21591054 | MS.gene63395:intron | 40.0% | |
CCAGCTACATCAAATACTAC+TGG | - | chr2.4:21592238-21592257 | MS.gene63395:intron | 40.0% | |
CCAGTAGTATTTGATGTAGC+TGG | + | chr2.4:21592241-21592260 | None:intergenic | 40.0% | |
CCTGTTGGATGATCTTCTTA+AGG | + | chr2.4:21590971-21590990 | None:intergenic | 40.0% | |
CCTTAAGAAGATCATCCAAC+AGG | - | chr2.4:21590968-21590987 | MS.gene63395:intron | 40.0% | |
CGATTTCGTGAATTAGGGAT+AGG | + | chr2.4:21587396-21587415 | None:intergenic | 40.0% | |
CTTCAGTAACTGAAGTAGTC+TGG | - | chr2.4:21591614-21591633 | MS.gene63395:intron | 40.0% | |
GAAATTCGAGAAACCAAACC+AGG | - | chr2.4:21589539-21589558 | MS.gene63395:intron | 40.0% | |
GAAGATCATCCAACAGGAAA+AGG | - | chr2.4:21590974-21590993 | MS.gene63395:intron | 40.0% | |
GATGTCAAGAGTGAAAGCAA+TGG | - | chr2.4:21590516-21590535 | MS.gene63395:intron | 40.0% | |
GCGGCAATTATGAACTATGA+AGG | - | chr2.4:21587929-21587948 | MS.gene63395:intron | 40.0% | |
GGAGAAAAGTGATGAAGACT+AGG | - | chr2.4:21591334-21591353 | MS.gene63395:intron | 40.0% | |
GGGTCAGAAAAACACCAAAT+TGG | + | chr2.4:21588600-21588619 | None:intergenic | 40.0% | |
GGTTGCAAAGAAAGCTGATA+CGG | - | chr2.4:21591696-21591715 | MS.gene63395:intron | 40.0% | |
GTAGTATTTGATGTAGCTGG+TGG | + | chr2.4:21592238-21592257 | None:intergenic | 40.0% | |
GTATTCCTAGCTACCATGTA+AGG | - | chr2.4:21587842-21587861 | MS.gene63395:intron | 40.0% | |
GTGAATTAGGGATAGGGTTT+CGG | + | chr2.4:21587389-21587408 | None:intergenic | 40.0% | |
GTGCTCTATCATTCCAATAG+TGG | + | chr2.4:21589598-21589617 | None:intergenic | 40.0% | |
TCAAATACTACTGGAAGAGG+AGG | - | chr2.4:21592247-21592266 | MS.gene63395:intron | 40.0% | |
TCCCAAGCAATTATCAGCTT+TGG | + | chr2.4:21588995-21589014 | None:intergenic | 40.0% | |
TGAAAAACATGAGGATGGGT+TGG | - | chr2.4:21587783-21587802 | MS.gene63395:intron | 40.0% | |
TGAAACCCACACAAAAGCAA+TGG | + | chr2.4:21589661-21589680 | None:intergenic | 40.0% | |
TGATACGGTTGCAAAGAAAG+CGG | - | chr2.4:21591690-21591709 | MS.gene63395:intron | 40.0% | |
TGATTTCAAAACCTGCAGGT+TGG | - | chr2.4:21590736-21590755 | MS.gene63395:CDS | 40.0% | |
TGCTTCATGAGCACAAGTTT+GGG | + | chr2.4:21590908-21590927 | None:intergenic | 40.0% | |
TGGAATATGCTCTCCACTAT+TGG | - | chr2.4:21589582-21589601 | MS.gene63395:intron | 40.0% | |
TGTAGCCAGAAAAAAAGTGG+TGG | - | chr2.4:21590011-21590030 | MS.gene63395:intron | 40.0% | |
TGTCAGTGCTATATAGGTAC+CGG | - | chr2.4:21588068-21588087 | MS.gene63395:CDS | 40.0% | |
TGTGCAAGCTAGTATTCCAA+AGG | - | chr2.4:21588909-21588928 | MS.gene63395:intron | 40.0% | |
TTCCAAAAGCAGAAGATGGA+AGG | + | chr2.4:21589567-21589586 | None:intergenic | 40.0% | |
! | AAAAGTGGCTCTGTTAATGG+AGG | - | chr2.4:21590639-21590658 | MS.gene63395:intron | 40.0% |
! | ATCCTTCCATCTTCTGCTTT+TGG | - | chr2.4:21589562-21589581 | MS.gene63395:intron | 40.0% |
! | ATGCCTTCAATTAGGAGTGT+TGG | - | chr2.4:21588215-21588234 | MS.gene63395:intron | 40.0% |
! | CACCAAATTGGTTCATGTCA+TGG | + | chr2.4:21588588-21588607 | None:intergenic | 40.0% |
! | GGGAGGAAAAAACCAAGTTT+TGG | + | chr2.4:21589473-21589492 | None:intergenic | 40.0% |
! | GGTTTGAGTGTCAACCTTTT+GGG | - | chr2.4:21588434-21588453 | MS.gene63395:CDS | 40.0% |
! | GTTTGAGTGTCAACCTTTTG+GGG | - | chr2.4:21588435-21588454 | MS.gene63395:CDS | 40.0% |
! | TAGCTTGCACACTATATACC+TGG | + | chr2.4:21588900-21588919 | None:intergenic | 40.0% |
! | TGGAGTGCCTTACAAACATT+AGG | - | chr2.4:21588799-21588818 | MS.gene63395:CDS | 40.0% |
! | TGGTTTGAGTGTCAACCTTT+TGG | - | chr2.4:21588433-21588452 | MS.gene63395:CDS | 40.0% |
! | TTGTCCTTTCTTTTTGCCTG+CGG | + | chr2.4:21590613-21590632 | None:intergenic | 40.0% |
!! | ACCATGTAAGGCTTGTTACT+GGG | - | chr2.4:21587854-21587873 | MS.gene63395:intron | 40.0% |
!! | ATTGCTTTTGTGTGGGTTTC+AGG | - | chr2.4:21589660-21589679 | MS.gene63395:intron | 40.0% |
!! | GTCGTATTGGTGTCAGATAT+CGG | - | chr2.4:21588026-21588045 | MS.gene63395:CDS | 40.0% |
!! | GTCTTTCCATTGCTTTTGTG+TGG | - | chr2.4:21589652-21589671 | MS.gene63395:intron | 40.0% |
!! | TACCATGTAAGGCTTGTTAC+TGG | - | chr2.4:21587853-21587872 | MS.gene63395:intron | 40.0% |
!! | TCGTATTGGTGTCAGATATC+GGG | - | chr2.4:21588027-21588046 | MS.gene63395:CDS | 40.0% |
!! | TCTGACCCATCATTTTGGTA+TGG | - | chr2.4:21588612-21588631 | MS.gene63395:CDS | 40.0% |
!!! | GTGCTATGTTTTTAGGAGGT+TGG | + | chr2.4:21590449-21590468 | None:intergenic | 40.0% |
AAGATGGAAGGATCCTGGTT+TGG | + | chr2.4:21589555-21589574 | None:intergenic | 45.0% | |
AATGTGTGATGCATCTCTCC+AGG | - | chr2.4:21589840-21589859 | MS.gene63395:intron | 45.0% | |
ACAAGCCTTACATGGTAGCT+AGG | + | chr2.4:21587850-21587869 | None:intergenic | 45.0% | |
ACTTCAAGGGACACCTAACA+AGG | + | chr2.4:21591840-21591859 | None:intergenic | 45.0% | |
AGCAATGGTACAGGAAATGC+AGG | - | chr2.4:21590531-21590550 | MS.gene63395:intron | 45.0% | |
AGGGTAAAAAGGAACGAGGA+TGG | - | chr2.4:21590348-21590367 | MS.gene63395:intron | 45.0% | |
AGTAACTGAAGTAGTCTGGG+AGG | - | chr2.4:21591618-21591637 | MS.gene63395:intron | 45.0% | |
ATCACCAAGTGCACAAGTAC+TGG | - | chr2.4:21591219-21591238 | MS.gene63395:intron | 45.0% | |
ATGAGTGGCATCAAATCTGC+TGG | + | chr2.4:21589211-21589230 | None:intergenic | 45.0% | |
ATTGGGGGAAGAGAAGTAAG+GGG | + | chr2.4:21587493-21587512 | None:intergenic | 45.0% | |
CACTAACCCGTTAACAGCTT+TGG | + | chr2.4:21591749-21591768 | None:intergenic | 45.0% | |
CGTCTCAGATCAACTTCAAG+TGG | - | chr2.4:21587423-21587442 | MS.gene63395:CDS | 45.0% | |
CGTTGTGCAATTACATGTCC+TGG | + | chr2.4:21589861-21589880 | None:intergenic | 45.0% | |
CTAGTTAGCCACCAGGAATT+AGG | + | chr2.4:21590285-21590304 | None:intergenic | 45.0% | |
CTCTGCAACTTCTCAGTAGA+TGG | + | chr2.4:21591249-21591268 | None:intergenic | 45.0% | |
CTCTGTTAATGGAGGTTCGT+TGG | - | chr2.4:21590647-21590666 | MS.gene63395:intron | 45.0% | |
CTGCTTCATGAGCACAAGTT+TGG | + | chr2.4:21590909-21590928 | None:intergenic | 45.0% | |
CTTTGCGGTTTCCTAATTCC+TGG | - | chr2.4:21590271-21590290 | MS.gene63395:intron | 45.0% | |
GAAGCACAGGAAGAGTTTGA+TGG | - | chr2.4:21588862-21588881 | MS.gene63395:intron | 45.0% | |
GAAGTGGTGTATGCTTTGTC+TGG | - | chr2.4:21587805-21587824 | MS.gene63395:intron | 45.0% | |
GATCATCCAACAGGAAAAGG+AGG | - | chr2.4:21590977-21590996 | MS.gene63395:intron | 45.0% | |
GCACCAACACTCCTAATTGA+AGG | + | chr2.4:21588221-21588240 | None:intergenic | 45.0% | |
GTAACTGAAGTAGTCTGGGA+GGG | - | chr2.4:21591619-21591638 | MS.gene63395:intron | 45.0% | |
GTGTGTCTGTTTGACATGTC+CGG | + | chr2.4:21588090-21588109 | None:intergenic | 45.0% | |
TAACTGAAGTAGTCTGGGAG+GGG | - | chr2.4:21591620-21591639 | MS.gene63395:intron | 45.0% | |
TACTAGCCGATTGTCCACTT+TGG | - | chr2.4:21592019-21592038 | MS.gene63395:intron | 45.0% | |
TCACCAAGTGCACAAGTACT+GGG | - | chr2.4:21591220-21591239 | MS.gene63395:intron | 45.0% | |
TCCCAGTAACAAGCCTTACA+TGG | + | chr2.4:21587858-21587877 | None:intergenic | 45.0% | |
TGTGCTCATGAAGCAGTACT+GGG | - | chr2.4:21590913-21590932 | MS.gene63395:intron | 45.0% | |
TTGCTTGGGAGACAATAGGT+AGG | - | chr2.4:21589005-21589024 | MS.gene63395:CDS | 45.0% | |
TTGTGCTCATGAAGCAGTAC+TGG | - | chr2.4:21590912-21590931 | MS.gene63395:intron | 45.0% | |
TTTCCCAGTACTTGTGCACT+TGG | + | chr2.4:21591226-21591245 | None:intergenic | 45.0% | |
TTTCTCCTCTTAGGTGAACC+TGG | + | chr2.4:21591321-21591340 | None:intergenic | 45.0% | |
! | GTTTTCAACCTGACCCCAAA+AGG | + | chr2.4:21588451-21588470 | None:intergenic | 45.0% |
! | TGTCCTTTCTTTTTGCCTGC+GGG | + | chr2.4:21590612-21590631 | None:intergenic | 45.0% |
!! | CAGTGTCGATGTATCAGTGT+CGG | + | chr2.4:21587980-21587999 | None:intergenic | 45.0% |
!!! | CAAGGCTTGGGTTTTGAAGA+TGG | + | chr2.4:21590690-21590709 | None:intergenic | 45.0% |
!! | TAATTATTGAATATATATTA+CGG | + | chr2.4:21589374-21589393 | None:intergenic | 5.0% |
!!! | GAATTTTTTTTTTTTTTTTT+TGG | - | chr2.4:21589920-21589939 | MS.gene63395:intron | 5.0% |
AACTGAAGTAGTCTGGGAGG+GGG | - | chr2.4:21591621-21591640 | MS.gene63395:intron | 50.0% | |
AAGGAACGAGGATGGACAAC+CGG | - | chr2.4:21590356-21590375 | MS.gene63395:intron | 50.0% | |
AGAGGAGGAAGCAAGAAAGC+AGG | - | chr2.4:21592262-21592281 | MS.gene63395:intron | 50.0% | |
AGAGTTCAAGACTGAGCACC+TGG | + | chr2.4:21590216-21590235 | None:intergenic | 50.0% | |
AGCAGAAGATGGAAGGATCC+TGG | + | chr2.4:21589560-21589579 | None:intergenic | 50.0% | |
AGGCTGCATGACTCCTTGTT+AGG | - | chr2.4:21591824-21591843 | MS.gene63395:intron | 50.0% | |
AGGTTCGTTGGCAAGCTTCT+GGG | - | chr2.4:21590659-21590678 | MS.gene63395:intron | 50.0% | |
AGTGCAGAAAAGGTCTCTCC+AGG | - | chr2.4:21591300-21591319 | MS.gene63395:intron | 50.0% | |
CAAAGCACAGCTGCATCCTT+TGG | + | chr2.4:21588928-21588947 | None:intergenic | 50.0% | |
CAAAGGATGCAGCTGTGCTT+TGG | - | chr2.4:21588926-21588945 | MS.gene63395:intron | 50.0% | |
CACAACAAGGGGTGAGAAAG+AGG | + | chr2.4:21589698-21589717 | None:intergenic | 50.0% | |
GAAGTTGCAGAGCAATGCTC+CGG | - | chr2.4:21591257-21591276 | MS.gene63395:intron | 50.0% | |
GTTACTGGGACAATGCTTGC+AGG | - | chr2.4:21587868-21587887 | MS.gene63395:intron | 50.0% | |
TCATTGCATTTCCAGCGCAC+CGG | - | chr2.4:21592201-21592220 | MS.gene63395:intron | 50.0% | |
TCTCTCCAGGTTCACCTAAG+AGG | - | chr2.4:21591313-21591332 | MS.gene63395:intron | 50.0% | |
TGATGGGAAATGCTCAGTCC+AGG | - | chr2.4:21588879-21588898 | MS.gene63395:intron | 50.0% | |
TGCGGTTTCCTAATTCCTGG+TGG | - | chr2.4:21590274-21590293 | MS.gene63395:intron | 50.0% | |
TGCTGGCCAAAGTGGACAAT+CGG | + | chr2.4:21592028-21592047 | None:intergenic | 50.0% | |
TGGTGTATGCTTTGTCTGGC+TGG | - | chr2.4:21587809-21587828 | MS.gene63395:intron | 50.0% | |
TTGCCCGCAGGCAAAAAGAA+AGG | - | chr2.4:21590606-21590625 | MS.gene63395:intron | 50.0% | |
! | GACAACCCTCCTTTTCCTGT+TGG | + | chr2.4:21590986-21591005 | None:intergenic | 50.0% |
! | TTCTTTTTGCCTGCGGGCAA+GGG | + | chr2.4:21590606-21590625 | None:intergenic | 50.0% |
! | TTTCTTTTTGCCTGCGGGCA+AGG | + | chr2.4:21590607-21590626 | None:intergenic | 50.0% |
!! | ACATGAGGATGGGTTGGAAG+TGG | - | chr2.4:21587789-21587808 | MS.gene63395:intron | 50.0% |
!! | CTGCAGGTTGGTTTCCATTC+CGG | - | chr2.4:21590748-21590767 | MS.gene63395:CDS | 50.0% |
!! | TTAGGAGTGTTGGTGCTGCA+TGG | - | chr2.4:21588225-21588244 | MS.gene63395:intron | 50.0% |
!!! | AGTGTCAACCTTTTGGGGTC+AGG | - | chr2.4:21588440-21588459 | MS.gene63395:CDS | 50.0% |
CGGAATGGAAACCAACCTGC+AGG | + | chr2.4:21590750-21590769 | None:intergenic | 55.0% | |
GAGGTTCGTTGGCAAGCTTC+TGG | - | chr2.4:21590658-21590677 | MS.gene63395:intron | 55.0% | |
GCTGGTGGCTTCTTAGTTGC+CGG | + | chr2.4:21592223-21592242 | None:intergenic | 55.0% | |
GGTTCGTTGGCAAGCTTCTG+GGG | - | chr2.4:21590660-21590679 | MS.gene63395:intron | 55.0% | |
GTTCAAGACTGAGCACCTGG+CGG | + | chr2.4:21590213-21590232 | None:intergenic | 55.0% | |
! | TCTGGAGTGGCAGAAACTGC+CGG | + | chr2.4:21590378-21590397 | None:intergenic | 55.0% |
! | TTTTCCTCTGGCACAGCGCA+AGG | + | chr2.4:21590708-21590727 | None:intergenic | 55.0% |
!! | TGTGTGGGTTTCAGGTTCGC+TGG | - | chr2.4:21589668-21589687 | MS.gene63395:intron | 55.0% |
AAGTCTCTTCCCTTGCCCGC+AGG | - | chr2.4:21590594-21590613 | MS.gene63395:intron | 60.0% | |
CTTCTTAGTTGCCGGTGCGC+TGG | + | chr2.4:21592215-21592234 | None:intergenic | 60.0% | |
TCTGGCACAGCGCAAGGCTT+GGG | + | chr2.4:21590702-21590721 | None:intergenic | 60.0% | |
TGAAGTAGTCTGGGAGGGGG+AGG | - | chr2.4:21591624-21591643 | MS.gene63395:intron | 60.0% | |
CAAGCCTTGCGCTGTGCCAG+AGG | - | chr2.4:21590701-21590720 | MS.gene63395:CDS | 65.0% | |
CTCTGGCACAGCGCAAGGCT+TGG | + | chr2.4:21590703-21590722 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 21587376 | 21592342 | 21587376 | ID=MS.gene63395 |
chr2.4 | mRNA | 21587376 | 21592342 | 21587376 | ID=MS.gene63395.t1;Parent=MS.gene63395 |
chr2.4 | exon | 21592274 | 21592342 | 21592274 | ID=MS.gene63395.t1.exon1;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21592274 | 21592342 | 21592274 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
chr2.4 | exon | 21592084 | 21592139 | 21592084 | ID=MS.gene63395.t1.exon2;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21592084 | 21592139 | 21592084 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
chr2.4 | exon | 21591829 | 21591953 | 21591829 | ID=MS.gene63395.t1.exon3;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21591829 | 21591953 | 21591829 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
chr2.4 | exon | 21590696 | 21590855 | 21590696 | ID=MS.gene63395.t1.exon4;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21590696 | 21590855 | 21590696 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
chr2.4 | exon | 21588965 | 21589401 | 21588965 | ID=MS.gene63395.t1.exon5;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21588965 | 21589401 | 21588965 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
chr2.4 | exon | 21588340 | 21588828 | 21588340 | ID=MS.gene63395.t1.exon6;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21588340 | 21588828 | 21588340 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
chr2.4 | exon | 21587957 | 21588098 | 21587957 | ID=MS.gene63395.t1.exon7;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21587957 | 21588098 | 21587957 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
chr2.4 | exon | 21587376 | 21587502 | 21587376 | ID=MS.gene63395.t1.exon8;Parent=MS.gene63395.t1 |
chr2.4 | CDS | 21587376 | 21587502 | 21587376 | ID=cds.MS.gene63395.t1;Parent=MS.gene63395.t1 |
Gene Sequence |
Protein sequence |