AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52975

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52975.t1 MTR_1g075680 98.806 754 9 0 1 754 1 754 0.0 1540
MS.gene52975.t1 MTR_4g092140 32.075 371 198 14 59 401 318 662 3.73e-34 139
MS.gene52975.t1 MTR_1g067630 29.673 428 226 18 18 400 4 401 2.33e-33 138
MS.gene52975.t1 MTR_7g109130 30.000 390 220 10 30 399 150 506 8.76e-33 136
MS.gene52975.t1 MTR_7g109130 30.000 390 220 10 30 399 71 427 9.38e-33 135
MS.gene52975.t1 MTR_7g109130 30.000 390 220 10 30 399 372 728 1.28e-32 136
MS.gene52975.t1 MTR_7g109130 30.649 385 227 10 30 399 372 731 1.79e-32 135
MS.gene52975.t1 MTR_7g105030 31.429 385 187 15 59 400 10 360 3.22e-32 134
MS.gene52975.t1 MTR_7g105030 31.429 385 187 15 59 400 10 360 3.22e-32 134
MS.gene52975.t1 MTR_5g031470 28.063 506 281 20 65 533 421 880 5.77e-32 134
MS.gene52975.t1 MTR_2g069950 31.476 359 184 12 67 409 364 676 7.72e-32 133
MS.gene52975.t1 MTR_5g049620 28.431 510 274 22 65 533 396 855 5.66e-31 130
MS.gene52975.t1 MTR_1g059730 31.169 385 188 14 59 400 14 364 7.04e-31 130
MS.gene52975.t1 MTR_5g049820 28.627 510 273 23 65 533 396 855 1.94e-30 129
MS.gene52975.t1 MTR_1g083770 32.288 319 179 8 124 430 477 770 4.63e-30 127
MS.gene52975.t1 MTR_4g081390 29.942 344 207 12 83 412 463 786 6.60e-30 127
MS.gene52975.t1 MTR_1g087880 28.788 396 225 12 26 399 364 724 1.04e-29 127
MS.gene52975.t1 MTR_7g112420 29.268 369 205 10 95 444 314 645 2.77e-29 125
MS.gene52975.t1 MTR_2g010760 32.110 327 179 12 99 409 481 780 3.60e-28 121
MS.gene52975.t1 MTR_2g096010 30.184 381 210 11 97 448 94 447 4.87e-28 121
MS.gene52975.t1 MTR_7g112420 29.396 364 205 10 95 444 444 769 5.94e-28 121
MS.gene52975.t1 MTR_7g091290 32.192 292 151 8 124 399 459 719 8.97e-27 117
MS.gene52975.t1 MTR_7g061020 25.424 413 234 12 48 424 5 379 3.73e-26 114
MS.gene52975.t1 MTR_8g098230 31.024 332 185 10 119 431 545 851 5.52e-26 115
MS.gene52975.t1 MTR_7g113520 29.855 345 185 14 76 400 148 455 7.41e-26 114
MS.gene52975.t1 MTR_5g025100 28.239 301 161 10 117 400 952 1214 7.60e-26 114
MS.gene52975.t1 MTR_5g096570 30.519 308 163 9 119 406 496 772 8.21e-26 114
MS.gene52975.t1 MTR_3g100270 29.070 344 171 11 91 396 40 348 1.83e-25 113
MS.gene52975.t1 MTR_2g082570 28.228 333 207 10 83 400 430 745 2.21e-25 112
MS.gene52975.t1 MTR_5g066320 29.429 333 185 10 91 396 48 357 5.57e-25 112
MS.gene52975.t1 MTR_3g060900 31.013 316 168 11 103 406 491 768 1.74e-24 110
MS.gene52975.t1 MTR_4g081390 30.796 289 169 10 83 357 465 736 1.85e-24 109
MS.gene52975.t1 MTR_1g018940 28.947 380 182 13 91 418 39 382 2.69e-24 109
MS.gene52975.t1 MTR_1g082920 29.483 329 178 12 90 400 183 475 2.74e-24 109
MS.gene52975.t1 MTR_3g102170 27.824 363 208 10 91 418 39 382 3.31e-24 109
MS.gene52975.t1 MTR_8g072430 27.703 296 177 9 117 404 938 1204 4.05e-24 109
MS.gene52975.t1 MTR_4g112350 26.603 312 186 8 97 396 174 454 4.30e-24 108
MS.gene52975.t1 MTR_1g081800 28.125 352 212 9 59 396 89 413 5.44e-24 107
MS.gene52975.t1 MTR_8g098230 30.383 339 186 11 119 431 545 859 5.48e-24 108
MS.gene52975.t1 MTR_4g087040 27.887 459 226 19 27 430 154 562 1.18e-23 108
MS.gene52975.t1 MTR_2g055910 27.245 323 186 9 88 396 109 396 3.10e-23 105
MS.gene52975.t1 MTR_6g086735 28.704 324 163 9 98 399 164 441 6.18e-23 104
MS.gene52975.t1 MTR_6g086735 28.704 324 163 9 98 399 164 441 6.22e-23 104
MS.gene52975.t1 MTR_8g080910 27.163 416 226 16 20 396 15 392 1.28e-22 104
MS.gene52975.t1 MTR_2g101990 27.988 343 188 10 78 399 207 511 1.48e-22 103
MS.gene52975.t1 MTR_2g087840 29.293 396 202 16 56 414 86 440 1.87e-22 103
MS.gene52975.t1 MTR_4g094882 26.761 355 193 11 91 400 43 375 3.59e-22 102
MS.gene52975.t1 MTR_5g011500 29.221 308 175 10 106 393 113 397 5.28e-22 102
MS.gene52975.t1 MTR_1g017540 27.812 320 164 10 105 397 55 334 4.55e-21 99.0
MS.gene52975.t1 MTR_4g071210 26.786 448 245 16 39 462 72 460 2.79e-20 97.1
MS.gene52975.t1 MTR_4g071210 26.786 448 245 16 39 462 72 460 2.82e-20 97.1
MS.gene52975.t1 MTR_8g104200 30.124 322 181 10 119 428 582 871 7.34e-20 95.5
MS.gene52975.t1 MTR_7g075060 27.469 324 161 11 105 393 107 391 1.40e-19 94.4
MS.gene52975.t1 MTR_2g436650 27.027 370 192 11 98 430 167 495 2.28e-19 93.6
MS.gene52975.t1 MTR_2g436650 27.273 385 197 12 98 440 247 590 2.72e-19 93.6
MS.gene52975.t1 MTR_3g117330 28.531 354 179 13 130 462 170 470 4.38e-19 93.2
MS.gene52975.t1 MTR_7g093720 27.869 305 156 10 115 396 129 392 4.37e-18 89.7
MS.gene52975.t1 MTR_3g084790 27.394 376 197 16 59 396 99 436 4.53e-18 89.7
MS.gene52975.t1 MTR_4g123730 28.834 326 174 10 99 396 191 486 4.94e-18 90.1
MS.gene52975.t1 MTR_4g124650 28.929 280 152 9 130 397 218 462 9.86e-18 88.6
MS.gene52975.t1 MTR_4g119980 27.523 327 167 10 98 396 255 539 1.17e-17 88.2
MS.gene52975.t1 MTR_7g091290 27.562 283 135 6 124 399 456 675 4.46e-17 86.7
MS.gene52975.t1 MTR_6g084490 28.274 336 191 9 120 436 541 845 1.93e-16 84.3
MS.gene52975.t1 MTR_1g484960 28.028 289 141 13 134 393 73 323 1.99e-14 78.2
MS.gene52975.t1 MTR_8g471180 25.464 377 198 14 97 458 187 495 1.58e-13 75.1
MS.gene52975.t1 MTR_8g076190 24.926 337 185 10 117 428 89 382 5.07e-13 73.6
MS.gene52975.t1 MTR_2g082570 26.829 246 151 7 83 314 430 660 5.23e-13 73.2
MS.gene52975.t1 MTR_5g094310 22.547 479 298 17 52 494 70 511 4.16e-12 70.5
MS.gene52975.t1 MTR_3g113630 26.059 307 165 13 89 374 136 401 2.36e-11 68.2
MS.gene52975.t1 MTR_3g113630 26.059 307 165 13 89 374 136 401 2.58e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52975.t1 AT4G14330 58.846 780 238 17 1 751 1 726 0.0 800
MS.gene52975.t1 AT4G21270 33.333 345 176 13 99 420 478 791 1.00e-34 142
MS.gene52975.t1 AT4G05190 32.394 355 203 13 59 393 429 766 5.62e-33 136
MS.gene52975.t1 AT4G05190 32.394 355 203 13 59 393 416 753 1.35e-32 135
MS.gene52975.t1 AT2G37420 28.000 500 281 20 18 477 3 463 4.46e-32 134
MS.gene52975.t1 AT2G37420 28.000 500 281 20 18 477 3 463 4.46e-32 134
MS.gene52975.t1 AT2G36200 31.169 385 188 15 59 400 13 363 3.10e-31 131
MS.gene52975.t1 AT2G36200 31.169 385 188 15 59 400 13 363 3.17e-31 132
MS.gene52975.t1 AT1G09170 29.032 434 233 15 18 422 397 784 1.45e-30 129
MS.gene52975.t1 AT1G09170 29.032 434 233 15 18 422 397 784 1.59e-30 129
MS.gene52975.t1 AT1G09170 29.197 411 218 14 18 399 397 763 1.67e-30 129
MS.gene52975.t1 AT1G09170 29.197 411 218 14 18 399 397 763 1.67e-30 129
MS.gene52975.t1 AT1G09170 29.197 411 218 14 18 399 397 763 4.82e-30 128
MS.gene52975.t1 AT2G28620 29.108 426 238 15 59 448 51 448 7.83e-30 127
MS.gene52975.t1 AT2G28620 29.108 426 238 15 59 448 51 448 7.83e-30 127
MS.gene52975.t1 AT2G28620 29.108 426 238 15 59 448 51 448 7.83e-30 127
MS.gene52975.t1 AT2G22610 26.590 519 301 16 63 556 437 900 1.59e-29 126
MS.gene52975.t1 AT4G27180 31.692 325 178 12 99 404 434 733 1.83e-29 125
MS.gene52975.t1 AT4G27180 31.692 325 178 12 99 404 434 733 1.83e-29 125
MS.gene52975.t1 AT2G22610 26.590 519 301 16 63 556 438 901 2.01e-29 126
MS.gene52975.t1 AT2G22610 27.011 522 285 18 63 533 437 913 2.45e-29 125
MS.gene52975.t1 AT3G45850 31.003 329 175 9 97 400 100 401 2.66e-29 125
MS.gene52975.t1 AT3G45850 31.003 329 175 9 97 400 100 401 2.66e-29 125
MS.gene52975.t1 AT2G47500 27.803 446 259 13 26 445 367 775 5.48e-29 124
MS.gene52975.t1 AT2G47500 27.803 446 259 13 26 445 367 775 6.09e-29 124
MS.gene52975.t1 AT5G27000 30.163 368 192 15 59 399 395 724 1.36e-28 123
MS.gene52975.t1 AT1G73860 30.704 355 199 12 95 430 551 877 4.74e-28 121
MS.gene52975.t1 AT1G73860 30.704 355 199 13 95 430 468 794 8.90e-28 120
MS.gene52975.t1 AT1G18410 29.538 325 174 11 95 399 531 820 1.72e-27 120
MS.gene52975.t1 AT1G18410 29.538 325 174 11 95 399 531 820 1.72e-27 120
MS.gene52975.t1 AT1G18410 29.538 325 174 11 95 399 674 963 1.96e-27 120
MS.gene52975.t1 AT1G72250 28.151 476 270 16 79 539 525 943 2.13e-27 119
MS.gene52975.t1 AT3G44730 31.419 296 164 7 124 406 446 715 2.19e-27 119
MS.gene52975.t1 AT3G44730 31.419 296 164 7 124 406 446 715 2.19e-27 119
MS.gene52975.t1 AT1G72250 28.151 476 270 16 79 539 516 934 2.21e-27 119
MS.gene52975.t1 AT1G72250 28.151 476 270 16 79 539 536 954 2.59e-27 119
MS.gene52975.t1 AT1G72250 28.151 476 270 16 79 539 537 955 2.70e-27 119
MS.gene52975.t1 AT3G44730 31.419 296 164 7 124 406 491 760 2.90e-27 119
MS.gene52975.t1 AT3G44730 31.419 296 164 7 124 406 491 760 2.90e-27 119
MS.gene52975.t1 AT5G60930 28.783 337 190 9 94 396 40 360 5.97e-27 118
MS.gene52975.t1 AT3G10310 32.119 302 154 9 124 406 430 699 7.77e-27 117
MS.gene52975.t1 AT5G60930 28.783 337 190 9 94 396 40 360 7.90e-27 118
MS.gene52975.t1 AT3G10310 32.119 302 154 9 124 406 430 699 8.20e-27 117
MS.gene52975.t1 AT5G60930 28.783 337 190 9 94 396 40 360 8.60e-27 118
MS.gene52975.t1 AT1G18410 29.577 355 191 12 95 431 521 834 1.24e-26 117
MS.gene52975.t1 AT5G54670 31.546 317 181 13 99 400 443 738 1.51e-26 116
MS.gene52975.t1 AT5G54670 31.546 317 181 13 99 400 443 738 1.51e-26 116
MS.gene52975.t1 AT3G54870 27.830 424 234 12 115 506 165 548 1.57e-26 116
MS.gene52975.t1 AT3G54870 27.830 424 234 12 115 506 165 548 1.58e-26 116
MS.gene52975.t1 AT5G54670 31.546 317 181 13 99 400 383 678 1.59e-26 116
MS.gene52975.t1 AT3G54870 27.830 424 234 12 115 506 165 548 2.08e-26 116
MS.gene52975.t1 AT1G18410 30.650 323 165 12 95 399 674 955 3.26e-26 115
MS.gene52975.t1 AT1G09170 29.570 372 190 13 18 360 397 725 1.43e-25 113
MS.gene52975.t1 AT1G09170 29.570 372 190 13 18 360 397 725 1.43e-25 113
MS.gene52975.t1 AT1G63640 28.954 411 227 15 26 406 425 800 1.46e-25 114
MS.gene52975.t1 AT1G63640 28.954 411 227 15 26 406 435 810 1.49e-25 114
MS.gene52975.t1 AT1G63640 28.954 411 227 15 26 406 435 810 1.49e-25 114
MS.gene52975.t1 AT1G63640 28.954 411 227 15 26 406 435 810 1.51e-25 114
MS.gene52975.t1 AT5G27550 27.520 367 201 11 90 440 168 485 2.85e-25 112
MS.gene52975.t1 AT5G27550 27.520 367 201 11 90 440 168 485 2.85e-25 112
MS.gene52975.t1 AT5G65930 27.974 311 173 11 113 406 945 1221 3.03e-25 113
MS.gene52975.t1 AT5G65930 27.974 311 173 11 113 406 944 1220 3.19e-25 112
MS.gene52975.t1 AT5G65930 27.974 311 173 11 113 406 951 1227 3.43e-25 112
MS.gene52975.t1 AT3G16060 29.851 335 175 10 98 415 218 509 5.03e-25 111
MS.gene52975.t1 AT1G55550 26.420 405 246 12 81 465 111 483 2.41e-24 109
MS.gene52975.t1 AT1G63640 28.230 418 214 14 26 406 435 803 2.97e-24 109
MS.gene52975.t1 AT5G47820 27.720 386 214 14 91 436 42 402 3.91e-24 109
MS.gene52975.t1 AT5G47820 27.720 386 214 14 91 436 42 402 3.91e-24 109
MS.gene52975.t1 AT1G18550 27.974 311 182 9 97 396 202 481 4.25e-24 108
MS.gene52975.t1 AT5G02370 27.483 302 180 7 99 396 74 340 4.96e-24 107
MS.gene52975.t1 AT1G12430 28.750 400 228 15 115 492 131 495 1.20e-23 107
MS.gene52975.t1 AT1G12430 28.750 400 228 15 115 492 131 495 1.28e-23 107
MS.gene52975.t1 AT5G41310 27.723 404 221 12 59 438 423 779 2.02e-23 107
MS.gene52975.t1 AT5G27950 27.108 332 199 10 86 396 95 404 3.83e-23 105
MS.gene52975.t1 AT3G50240 28.490 351 188 11 91 400 56 384 4.09e-22 102
MS.gene52975.t1 AT3G50240 28.490 351 188 11 91 400 56 384 4.24e-22 102
MS.gene52975.t1 AT3G50240 28.490 351 188 11 91 400 56 384 4.36e-22 102
MS.gene52975.t1 AT3G17360 27.206 408 201 17 34 396 149 505 9.81e-22 102
MS.gene52975.t1 AT3G17360 27.206 408 201 17 34 396 149 505 1.01e-21 102
MS.gene52975.t1 AT3G17360 27.206 408 201 17 34 396 149 505 1.05e-21 102
MS.gene52975.t1 AT3G49650 28.873 284 152 7 130 396 95 345 1.05e-21 101
MS.gene52975.t1 AT3G44050 29.262 393 206 16 56 414 91 445 1.27e-21 101
MS.gene52975.t1 AT3G63480 28.448 348 174 13 97 412 52 356 2.19e-21 98.6
MS.gene52975.t1 AT3G63480 28.775 351 173 12 97 412 52 360 6.70e-21 97.1
MS.gene52975.t1 AT1G01950 26.119 402 213 15 36 393 38 399 1.02e-20 98.2
MS.gene52975.t1 AT1G01950 26.119 402 213 15 36 393 38 399 1.07e-20 98.2
MS.gene52975.t1 AT1G01950 26.119 402 213 15 36 393 38 399 1.17e-20 97.8
MS.gene52975.t1 AT3G19050 28.398 412 208 17 46 414 178 545 1.18e-20 98.6
MS.gene52975.t1 AT1G59540 26.558 369 210 12 116 462 60 389 2.95e-20 96.7
MS.gene52975.t1 AT3G16630 28.045 353 179 12 78 396 215 526 8.55e-20 95.1
MS.gene52975.t1 AT3G16630 28.045 353 179 12 78 396 215 526 8.55e-20 95.1
MS.gene52975.t1 AT2G21380 29.373 303 158 10 110 396 159 421 1.89e-19 94.4
MS.gene52975.t1 AT2G21380 29.373 303 158 10 110 396 159 421 1.89e-19 94.4
MS.gene52975.t1 AT5G06670 28.620 297 146 10 124 396 131 385 3.49e-19 93.2
MS.gene52975.t1 AT5G06670 28.620 297 146 10 124 396 131 385 3.49e-19 93.2
MS.gene52975.t1 AT5G06670 28.620 297 146 10 124 396 131 385 4.25e-19 92.8
MS.gene52975.t1 AT5G06670 28.197 305 153 10 116 396 123 385 4.80e-19 92.4
MS.gene52975.t1 AT5G06670 28.197 305 153 10 116 396 123 385 4.80e-19 92.4
MS.gene52975.t1 AT5G06670 28.197 305 153 10 116 396 123 385 4.80e-19 92.4
MS.gene52975.t1 AT3G12020 31.000 300 135 13 124 396 134 388 6.78e-19 92.4
MS.gene52975.t1 AT3G12020 31.000 300 135 13 124 396 134 388 6.78e-19 92.4
MS.gene52975.t1 AT1G01950 28.522 291 142 10 136 393 1 258 6.99e-19 92.0
MS.gene52975.t1 AT4G39050 28.904 301 156 11 113 396 156 415 1.34e-18 91.7
MS.gene52975.t1 AT3G12020 30.333 300 137 12 124 396 134 388 1.57e-18 91.3
MS.gene52975.t1 AT3G12020 30.333 300 137 12 124 396 134 388 1.57e-18 91.3
MS.gene52975.t1 AT1G09170 36.806 144 81 3 264 399 586 727 3.57e-18 90.1
MS.gene52975.t1 AT5G06670 30.070 286 136 12 134 396 150 394 1.55e-17 88.2
MS.gene52975.t1 AT5G06670 30.070 286 136 12 134 396 150 394 1.55e-17 88.2
MS.gene52975.t1 AT4G14150 26.748 329 182 11 99 396 126 426 2.91e-17 87.4
MS.gene52975.t1 AT1G21730 28.477 302 158 11 115 396 131 394 3.66e-17 86.7
MS.gene52975.t1 AT3G23670 24.403 377 204 11 59 396 97 431 1.67e-16 84.7
MS.gene52975.t1 AT3G23670 24.403 377 204 11 59 396 97 431 2.45e-16 84.0
MS.gene52975.t1 AT3G50240 28.904 301 151 11 141 400 4 282 1.03e-15 82.0
MS.gene52975.t1 AT5G27950 26.538 260 157 7 149 396 1 238 1.20e-15 80.9
MS.gene52975.t1 AT2G21300 27.915 283 147 10 130 394 101 344 8.40e-15 79.0
MS.gene52975.t1 AT2G21300 27.915 283 147 10 130 394 101 344 8.40e-15 79.0
MS.gene52975.t1 AT2G21300 27.915 283 147 10 130 394 101 344 8.40e-15 79.0
MS.gene52975.t1 AT2G21300 27.915 283 147 10 130 394 101 344 8.40e-15 79.0
MS.gene52975.t1 AT2G21300 27.915 283 147 10 130 394 101 344 8.40e-15 79.0
MS.gene52975.t1 AT1G59540 25.893 336 188 12 149 462 1 297 1.11e-14 78.6
MS.gene52975.t1 AT5G10470 26.899 316 175 11 97 397 183 457 1.81e-14 78.2
MS.gene52975.t1 AT3G51150 24.533 428 227 15 99 499 66 424 2.03e-14 78.2
MS.gene52975.t1 AT5G10470 26.899 316 175 11 97 397 183 457 2.04e-14 78.2
MS.gene52975.t1 AT3G51150 24.533 428 227 15 99 499 66 424 2.10e-14 77.8
MS.gene52975.t1 AT3G51150 24.533 428 227 15 99 499 66 424 2.10e-14 77.8
MS.gene52975.t1 AT3G51150 24.533 428 227 15 99 499 66 424 2.10e-14 77.8
MS.gene52975.t1 AT4G24170 25.442 283 155 9 130 394 80 324 4.80e-13 73.6
MS.gene52975.t1 AT4G24170 25.442 283 155 9 130 394 80 324 4.80e-13 73.6
MS.gene52975.t1 AT5G65460 24.768 323 180 12 97 397 179 460 6.87e-13 73.2

Find 187 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATCTTTGTTGTTGAAAT+TGG 0.116300 1.1:-56638651 None:intergenic
AAGGATTAATGGTGTGAAAT+TGG 0.190481 1.1:+56638880 MS.gene52975:CDS
GTTCTAACTCTAGATCTATT+AGG 0.195325 1.1:+56638759 MS.gene52975:CDS
ATTAGGGTTAAGGCTGATTT+TGG 0.209720 1.1:+56638776 MS.gene52975:CDS
ACAAGAGTTGGAAAAGAAAT+TGG 0.209936 1.1:+56640998 MS.gene52975:CDS
GGAGGTGGTGGTGGAGGTGG+AGG 0.251870 1.1:+56639151 MS.gene52975:CDS
GGTGGTGGAGGTGGAGGGTT+TGG 0.257552 1.1:+56639157 MS.gene52975:CDS
TCGCTTTGGCTCCATATTCT+AGG 0.260142 1.1:-56640707 None:intergenic
GGGTTCGTTCGTTTACCTTT+AGG 0.261875 1.1:-56640965 None:intergenic
GGAGGTGGAGGGTTTGGATT+TGG 0.275827 1.1:+56639163 MS.gene52975:CDS
TGCTTCCAAGTTCTCCTTGT+TGG 0.303528 1.1:-56641774 None:intergenic
ACAATCTCTACCCTAGAATA+TGG 0.305778 1.1:+56640696 MS.gene52975:CDS
AAGAATGCAACCTATATATC+TGG 0.311451 1.1:+56640004 MS.gene52975:CDS
GTGAATTCTCAGCATCCTAT+TGG 0.311812 1.1:-56641606 None:intergenic
CTTGCTTGTAAAACAGATAA+AGG 0.314448 1.1:-56638737 None:intergenic
AGGATTAATGGTGTGAAATT+GGG 0.314756 1.1:+56638881 MS.gene52975:CDS
AGGGATTGGTGTTCCATATT+GGG 0.326230 1.1:-56641666 None:intergenic
ATTGTCTTGTGGATCTCTTT+AGG 0.326561 1.1:-56640678 None:intergenic
GTAAGTTTGCTGTCTCTAAA+AGG 0.328198 1.1:-56640478 None:intergenic
AACTTGGAAGCATATGTTAT+TGG 0.328997 1.1:+56641785 MS.gene52975:CDS
CAAAGGGAGCTCTCCCAATA+TGG 0.331740 1.1:+56641653 MS.gene52975:CDS
ACTGGAAGTGATGGGGAAAA+AGG 0.333442 1.1:+56639979 MS.gene52975:CDS
TTAATCTCCTCCTCACTTGC+AGG 0.333781 1.1:-56640942 None:intergenic
GAATCTTTGTTGTTGAAATT+GGG 0.334497 1.1:-56638650 None:intergenic
ATTCTCGCAATAACTTCAAT+TGG 0.339440 1.1:-56638686 None:intergenic
TTCTAACTCTAGATCTATTA+GGG 0.347769 1.1:+56638760 MS.gene52975:CDS
TTTGGTGATGGGTGTGGATG+TGG 0.353870 1.1:-56638626 None:intergenic
TTTGTGGAATCAAGGATTAA+TGG 0.354980 1.1:+56638869 MS.gene52975:CDS
ATTGAACAAGCTGGTCAAAC+TGG 0.355976 1.1:+56640275 MS.gene52975:CDS
TGCTTCATTTCCAGATATAT+AGG 0.362177 1.1:-56640014 None:intergenic
ATTTAACTTGTAGGTCAAAC+TGG 0.362307 1.1:+56639961 MS.gene52975:intron
GCAGGCGGGGATTGTGTATA+GGG 0.362748 1.1:+56638976 MS.gene52975:CDS
GAAGAGTCTTCCTCCTTAAC+CGG 0.362939 1.1:-56640756 None:intergenic
TAGGGATTGGTGTTCCATAT+TGG 0.364220 1.1:-56641667 None:intergenic
CCGAAGATAGAGGATTATTC+TGG 0.365897 1.1:+56641560 MS.gene52975:CDS
GGTAAGAGTCATACGATGTT+TGG 0.372659 1.1:+56638944 MS.gene52975:CDS
ATAACTTCAATTGGGTGTTC+AGG 0.383722 1.1:-56638677 None:intergenic
TACAAAAGCACGGATGATCT+TGG 0.385204 1.1:+56641236 MS.gene52975:CDS
AGGGCTTTGAGGGATATTCT+TGG 0.387276 1.1:+56638995 MS.gene52975:CDS
TTGTGGATCTCTTTAGGATC+AGG 0.388675 1.1:-56640672 None:intergenic
ACAAGAAATTTGTGGAATCA+AGG 0.392206 1.1:+56638861 MS.gene52975:CDS
AATGGTGAAATCGATGGATT+TGG 0.394062 1.1:+56641259 MS.gene52975:CDS
AGTGGAGAAAGAGGTGATAG+AGG 0.394089 1.1:+56641505 MS.gene52975:CDS
GGGTGTGGATGTGGTGGTGT+AGG 0.397359 1.1:-56638617 None:intergenic
TCCACCACCACCTCCATTAG+TGG 0.398128 1.1:-56639143 None:intergenic
CTCTAGATCTATTAGGGTTA+AGG 0.400943 1.1:+56638766 MS.gene52975:CDS
TCCACTAATGGAGGTGGTGG+TGG 0.407208 1.1:+56639142 MS.gene52975:CDS
GTATTTGGACAGGGTTGGTT+TGG 0.407900 1.1:-56641344 None:intergenic
TGAAAACGAGTCAAAAGAAA+TGG 0.408896 1.1:+56641178 MS.gene52975:CDS
AGTGGAAGAAGATGAGGAAG+TGG 0.412522 1.1:+56641487 MS.gene52975:CDS
ACTAATGGAGGTGGTGGTGG+AGG 0.414276 1.1:+56639145 MS.gene52975:CDS
TTGTTGTTGAAATTGGGATT+TGG 0.414314 1.1:-56638644 None:intergenic
TGTTTCTGAGGAAGAGGAAC+TGG 0.414383 1.1:+56638829 MS.gene52975:CDS
TTGGGATTTGGTGATGGGTG+TGG 0.417125 1.1:-56638632 None:intergenic
TTGAAATTGGGATTTGGTGA+TGG 0.418140 1.1:-56638638 None:intergenic
ATGTATGGACCGACTGGTTC+TGG 0.420486 1.1:+56638923 MS.gene52975:CDS
ACGAACTATACATTTCGCTT+TGG 0.425631 1.1:-56640721 None:intergenic
AATGGAGGTGGTGGTGGAGG+TGG 0.425905 1.1:+56639148 MS.gene52975:CDS
AAATGTACTATTATGATGTA+TGG 0.428051 1.1:+56638908 MS.gene52975:CDS
TGCTGTGCTAAGAGCTAAAG+TGG 0.429631 1.1:+56640911 MS.gene52975:CDS
GAGTTATCAAATGCGTTGAA+TGG 0.429834 1.1:-56638550 None:intergenic
AGCAGGCGGGGATTGTGTAT+AGG 0.429994 1.1:+56638975 MS.gene52975:CDS
TGGTCCTCATACCCCGGTTA+AGG 0.430902 1.1:+56640743 MS.gene52975:CDS
AGATGAGGAAGTGGAGAAAG+AGG 0.433971 1.1:+56641496 MS.gene52975:CDS
CGCTTTGGCTCCATATTCTA+GGG 0.438148 1.1:-56640706 None:intergenic
AGTGATGGTGATTCTTCTAA+AGG 0.439182 1.1:+56639043 MS.gene52975:CDS
AGAGGTGATAGAGGAAAAGA+GGG 0.443722 1.1:+56641514 MS.gene52975:CDS
TCTTCAGCGCTATATTTCCT+TGG 0.445828 1.1:-56640417 None:intergenic
AAGAGGTGATAGAGGAAAAG+AGG 0.445864 1.1:+56641513 MS.gene52975:CDS
GGAGCTGACAAGGAAAATAA+TGG 0.446418 1.1:+56641581 MS.gene52975:CDS
AGTGTCCAACAAGGAGAACT+TGG 0.452092 1.1:+56641769 MS.gene52975:CDS
GTGGAGGGTTTGGATTTGGT+TGG 0.454092 1.1:+56639167 MS.gene52975:CDS
TTTCCAACTCTTGTCTCAGA+TGG 0.455740 1.1:-56640989 None:intergenic
CATATTGGGAGAGCTCCCTT+TGG 0.459595 1.1:-56641652 None:intergenic
GTGATGGTGATTCTTCTAAA+GGG 0.459995 1.1:+56639044 MS.gene52975:CDS
CTCAAAAGAAATTCAGAAAG+TGG 0.460854 1.1:+56640045 MS.gene52975:CDS
CCAGAATAATCCTCTATCTT+CGG 0.462382 1.1:-56641560 None:intergenic
AAGCATCGTCTCAATTTCAA+TGG 0.463001 1.1:+56638581 MS.gene52975:CDS
AGGAAAATAATGGTTCCAAT+AGG 0.463360 1.1:+56641591 MS.gene52975:CDS
TTGAGGGATATTCTTGGAGA+TGG 0.464538 1.1:+56639001 MS.gene52975:CDS
CCAACTCTTGTCTCAGATGG+CGG 0.465010 1.1:-56640986 None:intergenic
CAACTCTTGTCTCAGATGGC+GGG 0.465050 1.1:-56640985 None:intergenic
TTCTTCTCACTTGATTTCAC+AGG 0.465509 1.1:-56641731 None:intergenic
CTCCAGCTCAACAAACTCAT+TGG 0.466125 1.1:-56641039 None:intergenic
GATTGTGTATAGGGCTTTGA+GGG 0.466134 1.1:+56638985 MS.gene52975:CDS
TGAAATTGGGATTTGGTGAT+GGG 0.466283 1.1:-56638637 None:intergenic
TAACAAAAGTCCGAAGATAG+AGG 0.467142 1.1:+56641550 MS.gene52975:CDS
TGAGGGATATTCTTGGAGAT+GGG 0.467584 1.1:+56639002 MS.gene52975:CDS
GTTTATCATGAAGTTACAAA+TGG 0.468535 1.1:+56640821 MS.gene52975:CDS
CTTGCGCGCGAAGTTATTGT+CGG 0.468571 1.1:+56641305 MS.gene52975:CDS
CAAAAGAAATGGAGCCGAAT+GGG 0.472089 1.1:+56641189 MS.gene52975:CDS
TATATATCTGGAAATGAAGC+AGG 0.472214 1.1:+56640016 MS.gene52975:CDS
GGATTAATGGTGTGAAATTG+GGG 0.476005 1.1:+56638882 MS.gene52975:CDS
GACCAATGAGTTTGTTGAGC+TGG 0.477397 1.1:+56641037 MS.gene52975:CDS
TGAGCTGGAGAGGAAGAGAA+TGG 0.480271 1.1:+56641052 MS.gene52975:CDS
GGATGTGGTGGTGTAGGTGC+TGG 0.486779 1.1:-56638611 None:intergenic
TCCTCCTTAACCGGGGTATG+AGG 0.489867 1.1:-56640747 None:intergenic
TATGTTTGTGCACCAAACTT+TGG 0.490049 1.1:+56641395 MS.gene52975:CDS
TGCGAGAATTCGTGACTACC+CGG 0.490085 1.1:+56638700 MS.gene52975:CDS
TACTCTCTGTGGAAACCAAA+GGG 0.492142 1.1:+56641637 MS.gene52975:CDS
AGAAAGGATATTGCAGCAGC+AGG 0.494111 1.1:+56641076 MS.gene52975:CDS
TGAAATTCTGAGGAAGAGAC+TGG 0.495469 1.1:+56641106 MS.gene52975:CDS
GAAGTTATTGTCGGCATGCA+AGG 0.497297 1.1:+56641314 MS.gene52975:CDS
AGCTGGTCAAACTGGATTTG+AGG 0.498372 1.1:+56640283 MS.gene52975:CDS
CTTGGAAGAGGAAGAAGGTG+TGG 0.498494 1.1:-56638522 None:intergenic
AAAGCACTCTTTGTAATGAC+AGG 0.500609 1.1:+56640086 MS.gene52975:CDS
AGAGGAAGAGAATGGAAGAA+AGG 0.502616 1.1:+56641060 MS.gene52975:CDS
TGTGAAATCAAGTGAGAAGA+AGG 0.502711 1.1:+56641733 MS.gene52975:CDS
TTAGCCGTCCTCCCACTGTT+GGG 0.505464 1.1:-56640223 None:intergenic
AGGAGAAGAAGAAGCAGAGC+AGG 0.509255 1.1:+56641454 MS.gene52975:CDS
GGATTGTGTATAGGGCTTTG+AGG 0.509476 1.1:+56638984 MS.gene52975:CDS
CTTGTTCTACAAGAAATTTG+TGG 0.509556 1.1:+56638853 MS.gene52975:CDS
TTTGGATGTTCGAAGCAGGC+GGG 0.512838 1.1:+56638962 MS.gene52975:CDS
GGTGATGGGTGTGGATGTGG+TGG 0.513114 1.1:-56638623 None:intergenic
TTCTCGCAATAACTTCAATT+GGG 0.514101 1.1:-56638685 None:intergenic
ATTAGCCGTCCTCCCACTGT+TGG 0.517267 1.1:-56640224 None:intergenic
GAGGTGGTGGTGGAGGTGGA+GGG 0.518438 1.1:+56639152 MS.gene52975:CDS
TTCTTCAAAGCAAGAGCGTA+AGG 0.520449 1.1:+56641154 MS.gene52975:CDS
TCAAAGTATTTGGACAGGGT+TGG 0.520555 1.1:-56641349 None:intergenic
TAGGTCAAACTGGAAGTGAT+GGG 0.521601 1.1:+56639971 MS.gene52975:intron
TGAATGGATTTGCTTGGAAG+AGG 0.523605 1.1:-56638534 None:intergenic
GATGTTTGGATGTTCGAAGC+AGG 0.524123 1.1:+56638958 MS.gene52975:CDS
ATGCGTTGAATGGATTTGCT+TGG 0.524842 1.1:-56638540 None:intergenic
ACGGCTAATGCTTGTGGACA+TGG 0.527289 1.1:+56640238 MS.gene52975:CDS
TCAGAAAATATTGAACAAGC+TGG 0.529266 1.1:+56640266 MS.gene52975:CDS
GGTGTCTGTTTCTGAGGAAG+AGG 0.533081 1.1:+56638823 MS.gene52975:CDS
ATAACTTCGCGCGCAAGGAA+TGG 0.533798 1.1:-56641299 None:intergenic
ATTTGCTTGGAAGAGGAAGA+AGG 0.534731 1.1:-56638527 None:intergenic
TGATGGGGTGTCTGTTTCTG+AGG 0.536317 1.1:+56638817 MS.gene52975:CDS
TTCAATTGGGTGTTCAGGAG+GGG 0.536985 1.1:-56638672 None:intergenic
TTGTCCACTAATGGAGGTGG+TGG 0.539176 1.1:+56639139 MS.gene52975:CDS
GTCTAAGAACAATGCTTCAA+AGG 0.539766 1.1:+56639189 MS.gene52975:CDS
TGAGGAGGAGATTAACCTAA+AGG 0.539837 1.1:+56640950 MS.gene52975:CDS
CTAATGCTTGTGGACATGGC+AGG 0.542042 1.1:+56640242 MS.gene52975:CDS
CTTCAATTGGGTGTTCAGGA+GGG 0.542953 1.1:-56638673 None:intergenic
GTAGGTCAAACTGGAAGTGA+TGG 0.543168 1.1:+56639970 MS.gene52975:intron
TTCAGAAAGTGGAGAAGCGA+AGG 0.543184 1.1:+56640056 MS.gene52975:CDS
ATGAGTTTGTTGAGCTGGAG+AGG 0.543613 1.1:+56641042 MS.gene52975:CDS
AAGAGTCTTCCTCCTTAACC+GGG 0.545497 1.1:-56640755 None:intergenic
TGATAAAGTGGAAGAAGATG+AGG 0.546943 1.1:+56641481 MS.gene52975:CDS
CCGCCATCTGAGACAAGAGT+TGG 0.548364 1.1:+56640986 MS.gene52975:CDS
CAAACTTACCATGCTTCTGC+AGG 0.553017 1.1:+56640492 MS.gene52975:CDS
ACTTCAATTGGGTGTTCAGG+AGG 0.559031 1.1:-56638674 None:intergenic
GAGGGATATTCTTGGAGATG+GGG 0.559140 1.1:+56639003 MS.gene52975:CDS
AGGATCAAGAATTGCTGCAA+TGG 0.559733 1.1:+56640794 MS.gene52975:CDS
AAAGCGAAATGTATAGTTCG+TGG 0.559976 1.1:+56640723 MS.gene52975:CDS
CGACAATAACTTCGCGCGCA+AGG 0.566431 1.1:-56641304 None:intergenic
AATTCTTGATCCTAAAATGA+CGG 0.569423 1.1:-56640784 None:intergenic
TTACTCTCTGTGGAAACCAA+AGG 0.570732 1.1:+56641636 MS.gene52975:CDS
GGATTATTCTGGAGCTGACA+AGG 0.572145 1.1:+56641571 MS.gene52975:CDS
GTGGTTGAGTCCATTGCAAA+TGG 0.573506 1.1:+56640442 MS.gene52975:CDS
CACAACATATTTACTCTCTG+TGG 0.574191 1.1:+56641626 MS.gene52975:CDS
GGGAGGACGGCTAATGCTTG+TGG 0.576293 1.1:+56640232 MS.gene52975:CDS
TCAAAAGAAATGGAGCCGAA+TGG 0.576334 1.1:+56641188 MS.gene52975:CDS
AGGAGGAAGTTGAAATTCTG+AGG 0.579813 1.1:+56641096 MS.gene52975:CDS
ATTATGATGTATGGACCGAC+TGG 0.580492 1.1:+56638917 MS.gene52975:CDS
AGTACAGTATATGAAGATGA+AGG 0.580728 1.1:+56641434 MS.gene52975:CDS
GTTTGGATGTTCGAAGCAGG+CGG 0.582763 1.1:+56638961 MS.gene52975:CDS
ATGTGAATCACCATTTGCAA+TGG 0.583556 1.1:-56640452 None:intergenic
AGAGCAGGATCATGATAAAG+TGG 0.584752 1.1:+56641469 MS.gene52975:CDS
GTTGATTACCTGCAGAAGCA+TGG 0.585396 1.1:-56640500 None:intergenic
ACAGATTCTGAAGGTAGTGA+TGG 0.588168 1.1:+56639028 MS.gene52975:CDS
TCCTCATACCCCGGTTAAGG+AGG 0.589007 1.1:+56640746 MS.gene52975:CDS
GGAAACAGCTCCTGCAAGTG+AGG 0.597967 1.1:+56640932 MS.gene52975:CDS
AGTTCGTGGTCCTCATACCC+CGG 0.605308 1.1:+56640737 MS.gene52975:CDS
ATGTCCCAACAGTGGGAGGA+CGG 0.607165 1.1:+56640219 MS.gene52975:CDS
CTAGGGTAGAGATTGTCTTG+TGG 0.610211 1.1:-56640689 None:intergenic
AACAGCTCCTGCAAGTGAGG+AGG 0.610821 1.1:+56640935 MS.gene52975:CDS
TTGAGACGATGCTTTGAACG+TGG 0.613136 1.1:-56638572 None:intergenic
TCTTGGAATGGTGAAATCGA+TGG 0.615678 1.1:+56641253 MS.gene52975:CDS
GCTTAGTGTTTACAAAAGCA+CGG 0.616489 1.1:+56641226 MS.gene52975:CDS
AAATATAGCGCTGAAGAGAG+TGG 0.617437 1.1:+56640423 MS.gene52975:CDS
AAGGATATTGCAGCAGCAGG+AGG 0.618726 1.1:+56641079 MS.gene52975:CDS
CTCGATGTCCCAACAGTGGG+AGG 0.638434 1.1:+56640215 MS.gene52975:CDS
ATACTCGATGTCCCAACAGT+GGG 0.638772 1.1:+56640212 MS.gene52975:CDS
ATATATCTGGAAATGAAGCA+GGG 0.639127 1.1:+56640017 MS.gene52975:CDS
TTGGAAGAGGAAGAAGGTGT+GGG 0.648163 1.1:-56638521 None:intergenic
GATGGGGATACAGATTCTGA+AGG 0.652121 1.1:+56639019 MS.gene52975:CDS
GAAATCGATGGATTTGGACA+TGG 0.652176 1.1:+56641265 MS.gene52975:CDS
GATACTCGATGTCCCAACAG+TGG 0.654849 1.1:+56640211 MS.gene52975:CDS
AAGCACGGATGATCTTGGAA+TGG 0.656263 1.1:+56641241 MS.gene52975:CDS
GAGTTCTAGAAGTCACTGCA+TGG 0.664378 1.1:+56640108 MS.gene52975:CDS
TTGGATGTTCGAAGCAGGCG+GGG 0.667487 1.1:+56638963 MS.gene52975:CDS
GATTAATGGTGTGAAATTGG+GGG 0.689277 1.1:+56638883 MS.gene52975:CDS
AGGTCAAACTGGAAGTGATG+GGG 0.696764 1.1:+56639972 MS.gene52975:intron
AGAGTCTTCCTCCTTAACCG+GGG 0.728596 1.1:-56640754 None:intergenic
TGACTCTTACCAGAACCAGT+CGG 0.741916 1.1:-56638932 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGTTAAAAACAAAATAGTT+TGG - chr1.1:56639549-56639568 None:intergenic 15.0%
!! AAATGTACTATTATGATGTA+TGG + chr1.1:56638908-56638927 MS.gene52975:CDS 20.0%
!! CACACTCAATTAATTAAAAA+GGG - chr1.1:56639905-56639924 None:intergenic 20.0%
!! TCAATTAATTAAAAAGGGTA+TGG - chr1.1:56639900-56639919 None:intergenic 20.0%
!! TTAAAGAAAGAAAATCGATA+TGG - chr1.1:56640335-56640354 None:intergenic 20.0%
!! TTCAAATGAATCCTTAAAAA+GGG - chr1.1:56640613-56640632 None:intergenic 20.0%
!!! TAATTTGCACAAAATTTTGT+TGG + chr1.1:56639429-56639448 MS.gene52975:intron 20.0%
!!! TTCATAATTTGTACACATTT+TGG + chr1.1:56639762-56639781 MS.gene52975:intron 20.0%
! AAACTATTGAGCTATATAGA+TGG - chr1.1:56639464-56639483 None:intergenic 25.0%
! AATTCTTGATCCTAAAATGA+CGG - chr1.1:56640787-56640806 None:intergenic 25.0%
! ATATAGCTCAATAGTTTATC+TGG + chr1.1:56639467-56639486 MS.gene52975:intron 25.0%
! CTTCAAATGAATCCTTAAAA+AGG - chr1.1:56640614-56640633 None:intergenic 25.0%
! GCACACTCAATTAATTAAAA+AGG - chr1.1:56639906-56639925 None:intergenic 25.0%
! GTTTATCATGAAGTTACAAA+TGG + chr1.1:56640821-56640840 MS.gene52975:CDS 25.0%
! TTCTAACTCTAGATCTATTA+GGG + chr1.1:56638760-56638779 MS.gene52975:CDS 25.0%
!! ATAGAGATTTTACTCTTGAT+GGG + chr1.1:56638801-56638820 MS.gene52975:CDS 25.0%
!! CATATCTAAGGTTTAAGATT+AGG + chr1.1:56639636-56639655 MS.gene52975:intron 25.0%
!! TATAGAGATTTTACTCTTGA+TGG + chr1.1:56638800-56638819 MS.gene52975:CDS 25.0%
!! TGTCCAAATACTTTGAAAAA+TGG + chr1.1:56641356-56641375 MS.gene52975:CDS 25.0%
!! TTAAGATTAGGATTGCTATT+TGG + chr1.1:56639648-56639667 MS.gene52975:intron 25.0%
!! TTTTCTGTTTTCCCTTTTTA+AGG + chr1.1:56640599-56640618 MS.gene52975:intron 25.0%
!! TTTTCTTTCTTTAATCTTGC+AGG + chr1.1:56640341-56640360 MS.gene52975:intron 25.0%
!!! ACTCCATTTTTCAAAGTATT+TGG - chr1.1:56641362-56641381 None:intergenic 25.0%
!!! ATTTTTCAAAGTATTTGGAC+AGG - chr1.1:56641357-56641376 None:intergenic 25.0%
!!! GAATCTTTGTTGTTGAAATT+GGG - chr1.1:56638653-56638672 None:intergenic 25.0%
!!! TAATTTGTACACATTTTGGT+TGG + chr1.1:56639766-56639785 MS.gene52975:intron 25.0%
!!! TGTTTTGGAGATTTATAATG+AGG + chr1.1:56639102-56639121 MS.gene52975:CDS 25.0%
!!! TTTTTCAAAGTATTTGGACA+GGG - chr1.1:56641356-56641375 None:intergenic 25.0%
AACTTGAAATAACATGGAAC+AGG - chr1.1:56640557-56640576 None:intergenic 30.0%
AAGAATGCAACCTATATATC+TGG + chr1.1:56640004-56640023 MS.gene52975:CDS 30.0%
AAGGATTAATGGTGTGAAAT+TGG + chr1.1:56638880-56638899 MS.gene52975:CDS 30.0%
ACAAGAAATTTGTGGAATCA+AGG + chr1.1:56638861-56638880 MS.gene52975:CDS 30.0%
ACAAGAGTTGGAAAAGAAAT+TGG + chr1.1:56640998-56641017 MS.gene52975:CDS 30.0%
ACAAGTTAAATTGCAGAAGT+AGG - chr1.1:56639952-56639971 None:intergenic 30.0%
AGAGCTAACTTGAAATAACA+TGG - chr1.1:56640563-56640582 None:intergenic 30.0%
AGCATAACATAAGCTTATCT+GGG + chr1.1:56639819-56639838 MS.gene52975:intron 30.0%
AGGAAAATAATGGTTCCAAT+AGG + chr1.1:56641591-56641610 MS.gene52975:CDS 30.0%
AGGATTAATGGTGTGAAATT+GGG + chr1.1:56638881-56638900 MS.gene52975:CDS 30.0%
AGTACAGTATATGAAGATGA+AGG + chr1.1:56641434-56641453 MS.gene52975:CDS 30.0%
ATATATCTGGAAATGAAGCA+GGG + chr1.1:56640017-56640036 MS.gene52975:CDS 30.0%
ATTCTCGCAATAACTTCAAT+TGG - chr1.1:56638689-56638708 None:intergenic 30.0%
CTCAAAAGAAATTCAGAAAG+TGG + chr1.1:56640045-56640064 MS.gene52975:CDS 30.0%
CTTGCTTGTAAAACAGATAA+AGG - chr1.1:56638740-56638759 None:intergenic 30.0%
CTTGTTCTACAAGAAATTTG+TGG + chr1.1:56638853-56638872 MS.gene52975:CDS 30.0%
GTTCTAACTCTAGATCTATT+AGG + chr1.1:56638759-56638778 MS.gene52975:CDS 30.0%
TAATTGAGTGTGCTAACATT+TGG + chr1.1:56639913-56639932 MS.gene52975:intron 30.0%
TATATATCTGGAAATGAAGC+AGG + chr1.1:56640016-56640035 MS.gene52975:CDS 30.0%
TCAGAAAATATTGAACAAGC+TGG + chr1.1:56640266-56640285 MS.gene52975:CDS 30.0%
TGAAAACGAGTCAAAAGAAA+TGG + chr1.1:56641178-56641197 MS.gene52975:CDS 30.0%
TGCTTCATTTCCAGATATAT+AGG - chr1.1:56640017-56640036 None:intergenic 30.0%
TGTGATGTAACATAACATGT+TGG + chr1.1:56639227-56639246 MS.gene52975:intron 30.0%
TGTTCTTCTGATCATATCTA+AGG + chr1.1:56639624-56639643 MS.gene52975:intron 30.0%
TTCATGAGCATATCACTAAA+TGG - chr1.1:56639676-56639695 None:intergenic 30.0%
TTCTCGCAATAACTTCAATT+GGG - chr1.1:56638688-56638707 None:intergenic 30.0%
TTCTTCAGATCATATGATTC+TGG + chr1.1:56639331-56639350 MS.gene52975:intron 30.0%
TTTGTGAGAATATAGCGAAA+CGG - chr1.1:56639385-56639404 None:intergenic 30.0%
TTTGTGGAATCAAGGATTAA+TGG + chr1.1:56638869-56638888 MS.gene52975:CDS 30.0%
! AACTTGGAAGCATATGTTAT+TGG + chr1.1:56641785-56641804 MS.gene52975:CDS 30.0%
! AGTCTGTTGTTGTACATTTT+AGG + chr1.1:56639302-56639321 MS.gene52975:intron 30.0%
! AGTTTTCTCATAAACCCATT+CGG - chr1.1:56641206-56641225 None:intergenic 30.0%
! TAGAGATTTTACTCTTGATG+GGG + chr1.1:56638802-56638821 MS.gene52975:CDS 30.0%
! TATGATCTTTTGTCCACTAA+TGG + chr1.1:56639130-56639149 MS.gene52975:CDS 30.0%
! TGTTTGTTTGAAGTGTTAAC+TGG + chr1.1:56639873-56639892 MS.gene52975:intron 30.0%
! TTGTTGTTGAAATTGGGATT+TGG - chr1.1:56638647-56638666 None:intergenic 30.0%
!! ACTTCTGCAATTTAACTTGT+AGG + chr1.1:56639952-56639971 MS.gene52975:intron 30.0%
!! ATTTAACTTGTAGGTCAAAC+TGG + chr1.1:56639961-56639980 MS.gene52975:intron 30.0%
!! GATCATATGATTCTGGAATT+TGG + chr1.1:56639338-56639357 MS.gene52975:intron 30.0%
!! GGAATCTTTGTTGTTGAAAT+TGG - chr1.1:56638654-56638673 None:intergenic 30.0%
!! TTGGCTTTAGGATTGTTATT+TGG + chr1.1:56639357-56639376 MS.gene52975:intron 30.0%
!! TTTTGTTCAGGTTACTGTTT+TGG + chr1.1:56639087-56639106 MS.gene52975:CDS 30.0%
!!! ACGACTTTTTTATTCTGATC+AGG + chr1.1:56640187-56640206 MS.gene52975:intron 30.0%
AAAGCGAAATGTATAGTTCG+TGG + chr1.1:56640723-56640742 MS.gene52975:CDS 35.0%
AAATTGCAGAAGTAGGAAAG+TGG - chr1.1:56639945-56639964 None:intergenic 35.0%
AATTGTATGTGCTGAGCATT+TGG + chr1.1:56639568-56639587 MS.gene52975:intron 35.0%
ACAATCTCTACCCTAGAATA+TGG + chr1.1:56640696-56640715 MS.gene52975:CDS 35.0%
ACGAACTATACATTTCGCTT+TGG - chr1.1:56640724-56640743 None:intergenic 35.0%
ATAACTTCAATTGGGTGTTC+AGG - chr1.1:56638680-56638699 None:intergenic 35.0%
ATGTGAATCACCATTTGCAA+TGG - chr1.1:56640455-56640474 None:intergenic 35.0%
ATTGTCTTGTGGATCTCTTT+AGG - chr1.1:56640681-56640700 None:intergenic 35.0%
CAAAAAGCTCATGAAGAAAG+AGG + chr1.1:56640881-56640900 MS.gene52975:CDS 35.0%
CACAACATATTTACTCTCTG+TGG + chr1.1:56641626-56641645 MS.gene52975:CDS 35.0%
CACTTTCTTGTGTACTCTAT+AGG + chr1.1:56639598-56639617 MS.gene52975:intron 35.0%
CAGACTGCAAAAATTAACCA+AGG + chr1.1:56640400-56640419 MS.gene52975:intron 35.0%
CAGCATAACATAAGCTTATC+TGG + chr1.1:56639818-56639837 MS.gene52975:intron 35.0%
CCAGAATAATCCTCTATCTT+CGG - chr1.1:56641563-56641582 None:intergenic 35.0%
CTATAGAGTACACAAGAAAG+TGG - chr1.1:56639600-56639619 None:intergenic 35.0%
CTCTAGATCTATTAGGGTTA+AGG + chr1.1:56638766-56638785 MS.gene52975:CDS 35.0%
GAGTTATCAAATGCGTTGAA+TGG - chr1.1:56638553-56638572 None:intergenic 35.0%
GATTAATGGTGTGAAATTGG+GGG + chr1.1:56638883-56638902 MS.gene52975:CDS 35.0%
GCTTAGTGTTTACAAAAGCA+CGG + chr1.1:56641226-56641245 MS.gene52975:CDS 35.0%
GGATTAATGGTGTGAAATTG+GGG + chr1.1:56638882-56638901 MS.gene52975:CDS 35.0%
GTCTAAGAACAATGCTTCAA+AGG + chr1.1:56639189-56639208 MS.gene52975:CDS 35.0%
GTTCTGATCGAATTTATCGT+TGG + chr1.1:56640154-56640173 MS.gene52975:intron 35.0%
TAACAAAAGTCCGAAGATAG+AGG + chr1.1:56641550-56641569 MS.gene52975:CDS 35.0%
TATGTTTGTGCACCAAACTT+TGG + chr1.1:56641395-56641414 MS.gene52975:CDS 35.0%
TGATAAAGTGGAAGAAGATG+AGG + chr1.1:56641481-56641500 MS.gene52975:CDS 35.0%
TGATCGAATTTATCGTTGGT+TGG + chr1.1:56640158-56640177 MS.gene52975:intron 35.0%
TGCTCTTTCTTTAACTCAGT+TGG + chr1.1:56639793-56639812 MS.gene52975:intron 35.0%
TGTGAAATCAAGTGAGAAGA+AGG + chr1.1:56641733-56641752 MS.gene52975:CDS 35.0%
TTATGTTCCAGTACACCAAA+AGG + chr1.1:56639714-56639733 MS.gene52975:intron 35.0%
TTCTTCTCACTTGATTTCAC+AGG - chr1.1:56641734-56641753 None:intergenic 35.0%
! AAAGCACTCTTTGTAATGAC+AGG + chr1.1:56640086-56640105 MS.gene52975:CDS 35.0%
! AAGCATCGTCTCAATTTCAA+TGG + chr1.1:56638581-56638600 MS.gene52975:CDS 35.0%
! AATGGTGAAATCGATGGATT+TGG + chr1.1:56641259-56641278 MS.gene52975:CDS 35.0%
! AGTGATGGTGATTCTTCTAA+AGG + chr1.1:56639043-56639062 MS.gene52975:CDS 35.0%
! GTGATGGTGATTCTTCTAAA+GGG + chr1.1:56639044-56639063 MS.gene52975:CDS 35.0%
!! ATTAGGGTTAAGGCTGATTT+TGG + chr1.1:56638776-56638795 MS.gene52975:CDS 35.0%
!! CATGCTTTTTGACCAAAGTT+TGG - chr1.1:56641410-56641429 None:intergenic 35.0%
!! GTAAGTTTGCTGTCTCTAAA+AGG - chr1.1:56640481-56640500 None:intergenic 35.0%
!! TCTTCTAAAGGGTTTTGTCT+CGG + chr1.1:56639055-56639074 MS.gene52975:CDS 35.0%
!! TCTTCTTCAACCGTCATTTT+AGG + chr1.1:56640774-56640793 MS.gene52975:CDS 35.0%
!! TGAAATTGGGATTTGGTGAT+GGG - chr1.1:56638640-56638659 None:intergenic 35.0%
!! TGATTCTGGAATTTGGCTTT+AGG + chr1.1:56639345-56639364 MS.gene52975:intron 35.0%
!! TTGAAATTGGGATTTGGTGA+TGG - chr1.1:56638641-56638660 None:intergenic 35.0%
!!! CATCAGACCTCTTTTTTGTA+GGG - chr1.1:56641688-56641707 None:intergenic 35.0%
!!! TCATCAGACCTCTTTTTTGT+AGG - chr1.1:56641689-56641708 None:intergenic 35.0%
!!! TGTTTTAAGAGTGTCCAACA+AGG + chr1.1:56641760-56641779 MS.gene52975:CDS 35.0%
AAGAGGTGATAGAGGAAAAG+AGG + chr1.1:56641513-56641532 MS.gene52975:CDS 40.0%
ACCAAAAGGTCAACTGAGAT+CGG + chr1.1:56639728-56639747 MS.gene52975:intron 40.0%
AGAGCAGGATCATGATAAAG+TGG + chr1.1:56641469-56641488 MS.gene52975:CDS 40.0%
AGAGGAAGAGAATGGAAGAA+AGG + chr1.1:56641060-56641079 MS.gene52975:CDS 40.0%
AGAGGTGATAGAGGAAAAGA+GGG + chr1.1:56641514-56641533 MS.gene52975:CDS 40.0%
AGGAGGAAGTTGAAATTCTG+AGG + chr1.1:56641096-56641115 MS.gene52975:CDS 40.0%
AGGATCAAGAATTGCTGCAA+TGG + chr1.1:56640794-56640813 MS.gene52975:CDS 40.0%
ATTATGATGTATGGACCGAC+TGG + chr1.1:56638917-56638936 MS.gene52975:CDS 40.0%
ATTGAACAAGCTGGTCAAAC+TGG + chr1.1:56640275-56640294 MS.gene52975:CDS 40.0%
ATTTGCTTGGAAGAGGAAGA+AGG - chr1.1:56638530-56638549 None:intergenic 40.0%
CAAAAGAAATGGAGCCGAAT+GGG + chr1.1:56641189-56641208 MS.gene52975:CDS 40.0%
CACCAATCCCTACAAAAAAG+AGG + chr1.1:56641678-56641697 MS.gene52975:CDS 40.0%
CCGAAGATAGAGGATTATTC+TGG + chr1.1:56641560-56641579 MS.gene52975:CDS 40.0%
GGAGCTGACAAGGAAAATAA+TGG + chr1.1:56641581-56641600 MS.gene52975:CDS 40.0%
GGTAAGAGTCATACGATGTT+TGG + chr1.1:56638944-56638963 MS.gene52975:CDS 40.0%
GTGAATTCTCAGCATCCTAT+TGG - chr1.1:56641609-56641628 None:intergenic 40.0%
TACTCTCTGTGGAAACCAAA+GGG + chr1.1:56641637-56641656 MS.gene52975:CDS 40.0%
TAGGTCAAACTGGAAGTGAT+GGG + chr1.1:56639971-56639990 MS.gene52975:intron 40.0%
TCAAAAGAAATGGAGCCGAA+TGG + chr1.1:56641188-56641207 MS.gene52975:CDS 40.0%
TCTTCAGCGCTATATTTCCT+TGG - chr1.1:56640420-56640439 None:intergenic 40.0%
TCTTGGAATGGTGAAATCGA+TGG + chr1.1:56641253-56641272 MS.gene52975:CDS 40.0%
TGAGGAGGAGATTAACCTAA+AGG + chr1.1:56640950-56640969 MS.gene52975:CDS 40.0%
TGAGGGATATTCTTGGAGAT+GGG + chr1.1:56639002-56639021 MS.gene52975:CDS 40.0%
TGAGTGTGCTAACATTTGGA+TGG + chr1.1:56639917-56639936 MS.gene52975:intron 40.0%
TTACTCTCTGTGGAAACCAA+AGG + chr1.1:56641636-56641655 MS.gene52975:CDS 40.0%
TTGAGGGATATTCTTGGAGA+TGG + chr1.1:56639001-56639020 MS.gene52975:CDS 40.0%
TTTCCAACTCTTGTCTCAGA+TGG - chr1.1:56640992-56641011 None:intergenic 40.0%
! AAAGGCTTGTCTTTTCGATC+CGG - chr1.1:56638722-56638741 None:intergenic 40.0%
! AAATATAGCGCTGAAGAGAG+TGG + chr1.1:56640423-56640442 MS.gene52975:CDS 40.0%
! ACAGATTCTGAAGGTAGTGA+TGG + chr1.1:56639028-56639047 MS.gene52975:CDS 40.0%
! AGGGATTGGTGTTCCATATT+GGG - chr1.1:56641669-56641688 None:intergenic 40.0%
! ATGCGTTGAATGGATTTGCT+TGG - chr1.1:56638543-56638562 None:intergenic 40.0%
! GAAATCGATGGATTTGGACA+TGG + chr1.1:56641265-56641284 MS.gene52975:CDS 40.0%
! GATCTTTTGTCCACTAATGG+AGG + chr1.1:56639133-56639152 MS.gene52975:CDS 40.0%
! GATTGTGTATAGGGCTTTGA+GGG + chr1.1:56638985-56639004 MS.gene52975:CDS 40.0%
! TACAAAAGCACGGATGATCT+TGG + chr1.1:56641236-56641255 MS.gene52975:CDS 40.0%
! TAGGGATTGGTGTTCCATAT+TGG - chr1.1:56641670-56641689 None:intergenic 40.0%
! TCAAAGTATTTGGACAGGGT+TGG - chr1.1:56641352-56641371 None:intergenic 40.0%
! TGAAATTCTGAGGAAGAGAC+TGG + chr1.1:56641106-56641125 MS.gene52975:CDS 40.0%
! TGAATGGATTTGCTTGGAAG+AGG - chr1.1:56638537-56638556 None:intergenic 40.0%
! TGGATTTGAGGCAAAAATGC+AGG + chr1.1:56640295-56640314 MS.gene52975:CDS 40.0%
! TTCTTCAAAGCAAGAGCGTA+AGG + chr1.1:56641154-56641173 MS.gene52975:CDS 40.0%
!! CTTCTAAAGGGTTTTGTCTC+GGG + chr1.1:56639056-56639075 MS.gene52975:CDS 40.0%
!! TTCTAAAGGGTTTTGTCTCG+GGG + chr1.1:56639057-56639076 MS.gene52975:CDS 40.0%
!! TTGTGGATCTCTTTAGGATC+AGG - chr1.1:56640675-56640694 None:intergenic 40.0%
!!! ATAGTTGCTTTTGTGGAAGG+TGG + chr1.1:56640132-56640151 MS.gene52975:intron 40.0%
!!! GACCTCTTTTTTGTAGGGAT+TGG - chr1.1:56641683-56641702 None:intergenic 40.0%
!!! GCATGGTATAGTTGCTTTTG+TGG + chr1.1:56640125-56640144 MS.gene52975:intron 40.0%
!!! GGTATAGTTGCTTTTGTGGA+AGG + chr1.1:56640129-56640148 MS.gene52975:intron 40.0%
AAGAGTCTTCCTCCTTAACC+GGG - chr1.1:56640758-56640777 None:intergenic 45.0%
AAGCACGGATGATCTTGGAA+TGG + chr1.1:56641241-56641260 MS.gene52975:CDS 45.0%
ACTTCAATTGGGTGTTCAGG+AGG - chr1.1:56638677-56638696 None:intergenic 45.0%
AGAAAGGATATTGCAGCAGC+AGG + chr1.1:56641076-56641095 MS.gene52975:CDS 45.0%
AGATGAGGAAGTGGAGAAAG+AGG + chr1.1:56641496-56641515 MS.gene52975:CDS 45.0%
AGCTGGTCAAACTGGATTTG+AGG + chr1.1:56640283-56640302 MS.gene52975:CDS 45.0%
AGGTCAAACTGGAAGTGATG+GGG + chr1.1:56639972-56639991 MS.gene52975:intron 45.0%
AGTGGAAGAAGATGAGGAAG+TGG + chr1.1:56641487-56641506 MS.gene52975:CDS 45.0%
AGTGGAGAAAGAGGTGATAG+AGG + chr1.1:56641505-56641524 MS.gene52975:CDS 45.0%
AGTGTCCAACAAGGAGAACT+TGG + chr1.1:56641769-56641788 MS.gene52975:CDS 45.0%
ATACTCGATGTCCCAACAGT+GGG + chr1.1:56640212-56640231 MS.gene52975:CDS 45.0%
CAAACTTACCATGCTTCTGC+AGG + chr1.1:56640492-56640511 MS.gene52975:CDS 45.0%
CTAGGGTAGAGATTGTCTTG+TGG - chr1.1:56640692-56640711 None:intergenic 45.0%
CTCCAGCTCAACAAACTCAT+TGG - chr1.1:56641042-56641061 None:intergenic 45.0%
CTTCAATTGGGTGTTCAGGA+GGG - chr1.1:56638676-56638695 None:intergenic 45.0%
GAAGAGTCTTCCTCCTTAAC+CGG - chr1.1:56640759-56640778 None:intergenic 45.0%
GAAGTTATTGTCGGCATGCA+AGG + chr1.1:56641314-56641333 MS.gene52975:CDS 45.0%
GAGGGATATTCTTGGAGATG+GGG + chr1.1:56639003-56639022 MS.gene52975:CDS 45.0%
GATGGGGATACAGATTCTGA+AGG + chr1.1:56639019-56639038 MS.gene52975:CDS 45.0%
GATGTTTGGATGTTCGAAGC+AGG + chr1.1:56638958-56638977 MS.gene52975:CDS 45.0%
GGATTGTGTATAGGGCTTTG+AGG + chr1.1:56638984-56639003 MS.gene52975:CDS 45.0%
GGGTTCGTTCGTTTACCTTT+AGG - chr1.1:56640968-56640987 None:intergenic 45.0%
GTAGGTCAAACTGGAAGTGA+TGG + chr1.1:56639970-56639989 MS.gene52975:intron 45.0%
GTGGTTGAGTCCATTGCAAA+TGG + chr1.1:56640442-56640461 MS.gene52975:CDS 45.0%
GTTGATTACCTGCAGAAGCA+TGG - chr1.1:56640503-56640522 None:intergenic 45.0%
TGACTCTTACCAGAACCAGT+CGG - chr1.1:56638935-56638954 None:intergenic 45.0%
TGCTGTGCTAAGAGCTAAAG+TGG + chr1.1:56640911-56640930 MS.gene52975:CDS 45.0%
TGCTTCCAAGTTCTCCTTGT+TGG - chr1.1:56641777-56641796 None:intergenic 45.0%
TTAATCTCCTCCTCACTTGC+AGG - chr1.1:56640945-56640964 None:intergenic 45.0%
TTCAATTGGGTGTTCAGGAG+GGG - chr1.1:56638675-56638694 None:intergenic 45.0%
TTCAGAAAGTGGAGAAGCGA+AGG + chr1.1:56640056-56640075 MS.gene52975:CDS 45.0%
! AAGGCTTGTCTTTTCGATCC+GGG - chr1.1:56638721-56638740 None:intergenic 45.0%
! ACTGGAAGTGATGGGGAAAA+AGG + chr1.1:56639979-56639998 MS.gene52975:CDS 45.0%
! CGCTTTGGCTCCATATTCTA+GGG - chr1.1:56640709-56640728 None:intergenic 45.0%
! CTTTTGTCCACTAATGGAGG+TGG + chr1.1:56639136-56639155 MS.gene52975:CDS 45.0%
! TCCGATCTCAGTTGACCTTT+TGG - chr1.1:56639732-56639751 None:intergenic 45.0%
! TCGCTTTGGCTCCATATTCT+AGG - chr1.1:56640710-56640729 None:intergenic 45.0%
! TGTTTCTGAGGAAGAGGAAC+TGG + chr1.1:56638829-56638848 MS.gene52975:CDS 45.0%
! TTGAGACGATGCTTTGAACG+TGG - chr1.1:56638575-56638594 None:intergenic 45.0%
! TTGGAAGAGGAAGAAGGTGT+GGG - chr1.1:56638524-56638543 None:intergenic 45.0%
!! AGGGCTTTGAGGGATATTCT+TGG + chr1.1:56638995-56639014 MS.gene52975:CDS 45.0%
!! ATGAGTTTGTTGAGCTGGAG+AGG + chr1.1:56641042-56641061 MS.gene52975:CDS 45.0%
!! CAGTTGACCTTTTGGTGTAC+TGG - chr1.1:56639724-56639743 None:intergenic 45.0%
!! GACCAATGAGTTTGTTGAGC+TGG + chr1.1:56641037-56641056 MS.gene52975:CDS 45.0%
!! GAGTTCTAGAAGTCACTGCA+TGG + chr1.1:56640108-56640127 MS.gene52975:CDS 45.0%
!! GGATTATTCTGGAGCTGACA+AGG + chr1.1:56641571-56641590 MS.gene52975:CDS 45.0%
!! GTATTTGGACAGGGTTGGTT+TGG - chr1.1:56641347-56641366 None:intergenic 45.0%
AAGGATATTGCAGCAGCAGG+AGG + chr1.1:56641079-56641098 MS.gene52975:CDS 50.0%
ACGGCTAATGCTTGTGGACA+TGG + chr1.1:56640238-56640257 MS.gene52975:CDS 50.0%
AGAGTCTTCCTCCTTAACCG+GGG - chr1.1:56640757-56640776 None:intergenic 50.0%
AGGAGAAGAAGAAGCAGAGC+AGG + chr1.1:56641454-56641473 MS.gene52975:CDS 50.0%
ATAACTTCGCGCGCAAGGAA+TGG - chr1.1:56641302-56641321 None:intergenic 50.0%
CAAAGGGAGCTCTCCCAATA+TGG + chr1.1:56641653-56641672 MS.gene52975:CDS 50.0%
CAACTCTTGTCTCAGATGGC+GGG - chr1.1:56640988-56641007 None:intergenic 50.0%
CATATTGGGAGAGCTCCCTT+TGG - chr1.1:56641655-56641674 None:intergenic 50.0%
CCAACTCTTGTCTCAGATGG+CGG - chr1.1:56640989-56641008 None:intergenic 50.0%
CTAATGCTTGTGGACATGGC+AGG + chr1.1:56640242-56640261 MS.gene52975:CDS 50.0%
CTTGCGCGCGAAGTTATTGT+CGG + chr1.1:56641305-56641324 MS.gene52975:CDS 50.0%
CTTGGAAGAGGAAGAAGGTG+TGG - chr1.1:56638525-56638544 None:intergenic 50.0%
GATACTCGATGTCCCAACAG+TGG + chr1.1:56640211-56640230 MS.gene52975:CDS 50.0%
GTTTGGATGTTCGAAGCAGG+CGG + chr1.1:56638961-56638980 MS.gene52975:CDS 50.0%
TGAGCTGGAGAGGAAGAGAA+TGG + chr1.1:56641052-56641071 MS.gene52975:CDS 50.0%
TGCGAGAATTCGTGACTACC+CGG + chr1.1:56638700-56638719 MS.gene52975:CDS 50.0%
TTGTCCACTAATGGAGGTGG+TGG + chr1.1:56639139-56639158 MS.gene52975:CDS 50.0%
TTTGGATGTTCGAAGCAGGC+GGG + chr1.1:56638962-56638981 MS.gene52975:CDS 50.0%
! ATGTATGGACCGACTGGTTC+TGG + chr1.1:56638923-56638942 MS.gene52975:CDS 50.0%
! GTGGAGGGTTTGGATTTGGT+TGG + chr1.1:56639167-56639186 MS.gene52975:CDS 50.0%
!! GGTGTCTGTTTCTGAGGAAG+AGG + chr1.1:56638823-56638842 MS.gene52975:CDS 50.0%
!! TGATGGGGTGTCTGTTTCTG+AGG + chr1.1:56638817-56638836 MS.gene52975:CDS 50.0%
!! TTGGGATTTGGTGATGGGTG+TGG - chr1.1:56638635-56638654 None:intergenic 50.0%
!! TTTGGTGATGGGTGTGGATG+TGG - chr1.1:56638629-56638648 None:intergenic 50.0%
AACAGCTCCTGCAAGTGAGG+AGG + chr1.1:56640935-56640954 MS.gene52975:CDS 55.0%
AGCAGGCGGGGATTGTGTAT+AGG + chr1.1:56638975-56638994 MS.gene52975:CDS 55.0%
AGTTCGTGGTCCTCATACCC+CGG + chr1.1:56640737-56640756 MS.gene52975:CDS 55.0%
ATGTCCCAACAGTGGGAGGA+CGG + chr1.1:56640219-56640238 MS.gene52975:CDS 55.0%
ATTAGCCGTCCTCCCACTGT+TGG - chr1.1:56640227-56640246 None:intergenic 55.0%
CGACAATAACTTCGCGCGCA+AGG - chr1.1:56641307-56641326 None:intergenic 55.0%
GCAGGCGGGGATTGTGTATA+GGG + chr1.1:56638976-56638995 MS.gene52975:CDS 55.0%
GGAAACAGCTCCTGCAAGTG+AGG + chr1.1:56640932-56640951 MS.gene52975:CDS 55.0%
GGAGGTGGAGGGTTTGGATT+TGG + chr1.1:56639163-56639182 MS.gene52975:CDS 55.0%
TCCACCACCACCTCCATTAG+TGG - chr1.1:56639146-56639165 None:intergenic 55.0%
TCCTCATACCCCGGTTAAGG+AGG + chr1.1:56640746-56640765 MS.gene52975:CDS 55.0%
TCCTCCTTAACCGGGGTATG+AGG - chr1.1:56640750-56640769 None:intergenic 55.0%
TGGTCCTCATACCCCGGTTA+AGG + chr1.1:56640743-56640762 MS.gene52975:CDS 55.0%
TTAGCCGTCCTCCCACTGTT+GGG - chr1.1:56640226-56640245 None:intergenic 55.0%
TTGGATGTTCGAAGCAGGCG+GGG + chr1.1:56638963-56638982 MS.gene52975:CDS 55.0%
! CCGCCATCTGAGACAAGAGT+TGG + chr1.1:56640986-56641005 MS.gene52975:CDS 55.0%
! CGGGGTGAGGACTTTTGTTC+AGG + chr1.1:56639075-56639094 MS.gene52975:CDS 55.0%
! TCCACTAATGGAGGTGGTGG+TGG + chr1.1:56639142-56639161 MS.gene52975:CDS 55.0%
!! AAGGGTTTTGTCTCGGGGTG+AGG + chr1.1:56639062-56639081 MS.gene52975:CDS 55.0%
!! ACTAATGGAGGTGGTGGTGG+AGG + chr1.1:56639145-56639164 MS.gene52975:CDS 55.0%
CTCGATGTCCCAACAGTGGG+AGG + chr1.1:56640215-56640234 MS.gene52975:CDS 60.0%
GGGAGGACGGCTAATGCTTG+TGG + chr1.1:56640232-56640251 MS.gene52975:CDS 60.0%
! GGATGTGGTGGTGTAGGTGC+TGG - chr1.1:56638614-56638633 None:intergenic 60.0%
! GGGTGTGGATGTGGTGGTGT+AGG - chr1.1:56638620-56638639 None:intergenic 60.0%
!! AATGGAGGTGGTGGTGGAGG+TGG + chr1.1:56639148-56639167 MS.gene52975:CDS 60.0%
!! GGTGATGGGTGTGGATGTGG+TGG - chr1.1:56638626-56638645 None:intergenic 60.0%
!! GAGGTGGTGGTGGAGGTGGA+GGG + chr1.1:56639152-56639171 MS.gene52975:CDS 65.0%
!! GGTGGTGGAGGTGGAGGGTT+TGG + chr1.1:56639157-56639176 MS.gene52975:CDS 65.0%
!! GGAGGTGGTGGTGGAGGTGG+AGG + chr1.1:56639151-56639170 MS.gene52975:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 56638515 56641814 56638515 ID=MS.gene52975
chr1.1 mRNA 56638515 56641814 56638515 ID=MS.gene52975.t1;Parent=MS.gene52975
chr1.1 exon 56638515 56639210 56638515 ID=MS.gene52975.t1.exon1;Parent=MS.gene52975.t1
chr1.1 CDS 56638515 56639210 56638515 ID=cds.MS.gene52975.t1;Parent=MS.gene52975.t1
chr1.1 exon 56639974 56640129 56639974 ID=MS.gene52975.t1.exon2;Parent=MS.gene52975.t1
chr1.1 CDS 56639974 56640129 56639974 ID=cds.MS.gene52975.t1;Parent=MS.gene52975.t1
chr1.1 exon 56640209 56640316 56640209 ID=MS.gene52975.t1.exon3;Parent=MS.gene52975.t1
chr1.1 CDS 56640209 56640316 56640209 ID=cds.MS.gene52975.t1;Parent=MS.gene52975.t1
chr1.1 exon 56640403 56640513 56640403 ID=MS.gene52975.t1.exon4;Parent=MS.gene52975.t1
chr1.1 CDS 56640403 56640513 56640403 ID=cds.MS.gene52975.t1;Parent=MS.gene52975.t1
chr1.1 exon 56640621 56641814 56640621 ID=MS.gene52975.t1.exon5;Parent=MS.gene52975.t1
chr1.1 CDS 56640621 56641814 56640621 ID=cds.MS.gene52975.t1;Parent=MS.gene52975.t1
Gene Sequence

>MS.gene52975

ATGGCTCCCACACCTTCTTCCTCTTCCAAGCAAATCCATTCAACGCATTTGATAACTCCACGTTCAAAGCATCGTCTCAATTTCAATGGTCTCAAACCAGCACCTACACCACCACATCCACACCCATCACCAAATCCCAATTTCAACAACAAAGATTCCCCTCCTGAACACCCAATTGAAGTTATTGCGAGAATTCGTGACTACCCGGATCGAAAAGACAAGCCTTTATCTGTTTTACAAGCAAGTTCTAACTCTAGATCTATTAGGGTTAAGGCTGATTTTGGTTATAGAGATTTTACTCTTGATGGGGTGTCTGTTTCTGAGGAAGAGGAACTGGACTTGTTCTACAAGAAATTTGTGGAATCAAGGATTAATGGTGTGAAATTGGGGGATAAATGTACTATTATGATGTATGGACCGACTGGTTCTGGTAAGAGTCATACGATGTTTGGATGTTCGAAGCAGGCGGGGATTGTGTATAGGGCTTTGAGGGATATTCTTGGAGATGGGGATACAGATTCTGAAGGTAGTGATGGTGATTCTTCTAAAGGGTTTTGTCTCGGGGTGAGGACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAGGAGATTTATGATCTTTTGTCCACTAATGGAGGTGGTGGTGGAGGTGGAGGGTTTGGATTTGGTTGGTCTAAGAACAATGCTTCAAAGGTAATAATATAGTACATGTGATGTAACATAACATGTTGGTTTCATCATTTGATCTGTTTTTTGTTTTGTTATGTTTGCTTCAAATGTGTTTAGTCTGTTGTTGTACATTTTAGGTTTTTGTTCTTCAGATCATATGATTCTGGAATTTGGCTTTAGGATTGTTATTTGGCTCCGTTTCGCTATATTCTCACAAAATTTGTATGTTTTAGTTATTTTCATAATTTGCACAAAATTTTGTTGGTTAAATTTACCATCTATATAGCTCAATAGTTTATCTGGACTAGTTATTATTCAAATCAATATTAAACATCAGATGTTAGTTTTGAAAGTGTTAACCAAACTATTTTGTTTTTAACTAATTGTATGTGCTGAGCATTTGGATAGTGCCACTTTCTTGTGTACTCTATAGGTTTTGTTCTTCTGATCATATCTAAGGTTTAAGATTAGGATTGCTATTTGGCTCCATTTAGTGATATGCTCATGAAGTTTGCATGTTTTACTTGTTATGTTCCAGTACACCAAAAGGTCAACTGAGATCGGAACAACTTATGTTCATAATTTGTACACATTTTGGTTGGAATTTGCTCTTTCTTTAACTCAGTTGGTTCAGCATAACATAAGCTTATCTGGGCTAGTTATTCATACTAATATTAAAAATCAGATGTTTGTTTGAAGTGTTAACTGGACCATACCCTTTTTAATTAATTGAGTGTGCTAACATTTGGATGGTGCCACTTTCCTACTTCTGCAATTTAACTTGTAGGTCAAACTGGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACTCTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTATAGTTGCTTTTGTGGAAGGTGGTTCTGATCGAATTTATCGTTGGTTGGTAACTGACGACTTTTTTATTCTGATCAGGTGATACTCGATGTCCCAACAGTGGGAGGACGGCTAATGCTTGTGGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGGTTATTATTTTTCTGCCATATCGATTTTCTTTCTTTAATCTTGCAGGTTCTCTACTGATTATATAACACTGTTGATGAATTTACAGACTGCAAAAATTAACCAAGGAAATATAGCGCTGAAGAGAGTGGTTGAGTCCATTGCAAATGGTGATTCACATGTGCCTTTTAGAGACAGCAAACTTACCATGCTTCTGCAGGTAATCAACTAATTATTATTTTTTAGTTAATTGCTTGATTCCTGTTCCATGTTATTTCAAGTTAGCTCTTTTGATGCTGAGTATTTTTTCTGTTTTCCCTTTTTAAGGATTCATTTGAAGATGATAAGTCAAAAATTCTAATGATACTATGCGCAAGTCCTGATCCTAAAGAGATCCACAAGACAATCTCTACCCTAGAATATGGAGCCAAAGCGAAATGTATAGTTCGTGGTCCTCATACCCCGGTTAAGGAGGAAGACTCTTCTTCAACCGTCATTTTAGGATCAAGAATTGCTGCAATGGATGAGTTTATCATGAAGTTACAAATGGAAAACAAGCTAAGAGAGAAAGAGCGAAACGAAGCGCACAAAAAGCTCATGAAGAAAGAGGAAGAAATTGCTGTGCTAAGAGCTAAAGTGGAAACAGCTCCTGCAAGTGAGGAGGAGATTAACCTAAAGGTAAACGAACGAACCCGCCATCTGAGACAAGAGTTGGAAAAGAAATTGGAAGAGTGTCAAAGAATGACCAATGAGTTTGTTGAGCTGGAGAGGAAGAGAATGGAAGAAAGGATATTGCAGCAGCAGGAGGAAGTTGAAATTCTGAGGAAGAGACTGGAAGAAATTGAGTTGCAGCTGTGCAGTTCTTCAAAGCAAGAGCGTAAGGATGAAAACGAGTCAAAAGAAATGGAGCCGAATGGGTTTATGAGAAAACTGCTTAGTGTTTACAAAAGCACGGATGATCTTGGAATGGTGAAATCGATGGATTTGGACATGGACGATCAAGAACCATTCCTTGCGCGCGAAGTTATTGTCGGCATGCAAGGCATTTCACCAAACCAACCCTGTCCAAATACTTTGAAAAATGGAGTACAAGAAGATGCTTATGTTTGTGCACCAAACTTTGGTCAAAAAGCATGTCTAAGTACAGTATATGAAGATGAAGGAGAAGAAGAAGCAGAGCAGGATCATGATAAAGTGGAAGAAGATGAGGAAGTGGAGAAAGAGGTGATAGAGGAAAAGAGGGTATGTAGTGTTGTTAACAAAAGTCCGAAGATAGAGGATTATTCTGGAGCTGACAAGGAAAATAATGGTTCCAATAGGATGCTGAGAATTCACAACATATTTACTCTCTGTGGAAACCAAAGGGAGCTCTCCCAATATGGAACACCAATCCCTACAAAAAAGAGGTCTGATGAAAGTTTTGATTTCAAATGTTCTCCTGTGAAATCAAGTGAGAAGAAGGATTCTGTTTTAAGAGTGTCCAACAAGGAGAACTTGGAAGCATATGTTATTGGAAATTAG
Protein sequence

>MS.gene52975.t1

MAPTPSSSSKQIHSTHLITPRSKHRLNFNGLKPAPTPPHPHPSPNPNFNNKDSPPEHPIEVIARIRDYPDRKDKPLSVLQASSNSRSIRVKADFGYRDFTLDGVSVSEEEELDLFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRALRDILGDGDTDSEGSDGDSSKGFCLGVRTFVQVTVLEIYNEEIYDLLSTNGGGGGGGGFGFGWSKNNASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEDSSSTVILGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEIAVLRAKVETAPASEEEINLKVNERTRHLRQELEKKLEECQRMTNEFVELERKRMEERILQQQEEVEILRKRLEEIELQLCSSSKQERKDENESKEMEPNGFMRKLLSVYKSTDDLGMVKSMDLDMDDQEPFLAREVIVGMQGISPNQPCPNTLKNGVQEDAYVCAPNFGQKACLSTVYEDEGEEEAEQDHDKVEEDEEVEKEVIEEKRVCSVVNKSPKIEDYSGADKENNGSNRMLRIHNIFTLCGNQRELSQYGTPIPTKKRSDESFDFKCSPVKSSEKKDSVLRVSNKENLEAYVIGN