Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060374.t1 | XP_003609535.1 | 96.5 | 346 | 12 | 0 | 1 | 346 | 1 | 346 | 9.80E-193 | 682.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060374.t1 | Q3E9D5 | 62.8 | 355 | 113 | 8 | 1 | 344 | 1 | 347 | 2.6e-117 | 423.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060374.t1 | G7JHV3 | 96.5 | 346 | 12 | 0 | 1 | 346 | 1 | 346 | 7.1e-193 | 682.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054850 | MS.gene060374 | 0.808189 | 3.50E-50 | -1.69E-46 |
| MS.gene058853 | MS.gene060374 | 0.821742 | 3.44E-53 | -1.69E-46 |
| MS.gene060374 | MS.gene27812 | 0.809298 | 2.03E-50 | -1.69E-46 |
| MS.gene060374 | MS.gene31917 | 0.805438 | 1.34E-49 | -1.69E-46 |
| MS.gene060374 | MS.gene31973 | 0.802329 | 5.91E-49 | -1.69E-46 |
| MS.gene060374 | MS.gene33809 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene060374 | MS.gene53408 | 0.808239 | 3.42E-50 | -1.69E-46 |
| MS.gene060374 | MS.gene94954 | 0.804684 | 1.92E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060374.t1 | MTR_4g118320 | 99.133 | 346 | 3 | 0 | 1 | 346 | 1 | 346 | 0.0 | 719 |
| MS.gene060374.t1 | MTR_2g020990 | 75.568 | 352 | 72 | 5 | 1 | 344 | 1 | 346 | 0.0 | 536 |
| MS.gene060374.t1 | MTR_0003s0660 | 40.936 | 342 | 178 | 7 | 5 | 340 | 55 | 378 | 1.10e-78 | 246 |
| MS.gene060374.t1 | MTR_0076s0020 | 43.391 | 348 | 170 | 9 | 1 | 339 | 1 | 330 | 7.55e-78 | 243 |
| MS.gene060374.t1 | MTR_7g018290 | 40.762 | 341 | 178 | 7 | 5 | 339 | 9 | 331 | 9.79e-78 | 243 |
| MS.gene060374.t1 | MTR_8g069905 | 41.379 | 348 | 177 | 10 | 1 | 339 | 3 | 332 | 1.93e-71 | 227 |
| MS.gene060374.t1 | MTR_7g018310 | 39.474 | 342 | 162 | 7 | 5 | 340 | 55 | 357 | 4.04e-70 | 224 |
| MS.gene060374.t1 | MTR_7g018320 | 38.643 | 339 | 138 | 7 | 5 | 339 | 55 | 327 | 2.61e-62 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060374.t1 | AT5G18930 | 62.817 | 355 | 113 | 8 | 1 | 344 | 1 | 347 | 2.96e-153 | 434 |
| MS.gene060374.t1 | AT3G02470 | 41.667 | 348 | 178 | 9 | 1 | 339 | 1 | 332 | 1.45e-82 | 255 |
| MS.gene060374.t1 | AT3G02470 | 41.667 | 348 | 178 | 9 | 1 | 339 | 1 | 332 | 1.45e-82 | 255 |
| MS.gene060374.t1 | AT3G02470 | 41.667 | 348 | 178 | 9 | 1 | 339 | 1 | 332 | 1.45e-82 | 255 |
| MS.gene060374.t1 | AT3G25570 | 43.931 | 346 | 174 | 8 | 1 | 339 | 1 | 333 | 1.03e-79 | 247 |
| MS.gene060374.t1 | AT3G25570 | 43.931 | 346 | 174 | 8 | 1 | 339 | 1 | 333 | 1.03e-79 | 247 |
| MS.gene060374.t1 | AT5G15950 | 43.046 | 302 | 151 | 5 | 1 | 296 | 3 | 289 | 8.10e-77 | 240 |
| MS.gene060374.t1 | AT5G15950 | 43.046 | 302 | 151 | 5 | 1 | 296 | 3 | 289 | 8.10e-77 | 240 |
| MS.gene060374.t1 | AT3G17717 | 35.593 | 118 | 66 | 2 | 182 | 296 | 17 | 127 | 2.75e-17 | 77.8 |
Find 67 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATAAAGTGAGGCCTATT+TGG | 0.238267 | 8.4:+13031742 | None:intergenic |
| CGGTTGGAACTTCATTTCTT+TGG | 0.257423 | 8.4:-13031996 | MS.gene060374:CDS |
| TGGTTTGCATAGTGAATTAA+AGG | 0.281734 | 8.4:+13031762 | None:intergenic |
| TCGGTTTCCCGCGGCGGATA+TGG | 0.292619 | 8.4:-13031052 | MS.gene060374:CDS |
| AGGGATAGTGTCTTCTAAAT+AGG | 0.294020 | 8.4:+13031641 | None:intergenic |
| ATTCACTATGCAAACCAAAT+AGG | 0.302334 | 8.4:-13031756 | MS.gene060374:CDS |
| AAAGAGATGACGGAGCTTAC+TGG | 0.320761 | 8.4:-13031393 | MS.gene060374:CDS |
| ACACCCCAAATGGCTGTATC+TGG | 0.329316 | 8.4:-13032038 | None:intergenic |
| AAGGGAAAGGTTGTGCATTT+GGG | 0.344982 | 8.4:+13031688 | None:intergenic |
| TTCTAGCTCGGAAATTCTTC+CGG | 0.362591 | 8.4:-13031452 | MS.gene060374:CDS |
| AAGTCACAAATGAATGCATT+TGG | 0.369954 | 8.4:+13031354 | None:intergenic |
| TAAGGGAAAGGTTGTGCATT+TGG | 0.385623 | 8.4:+13031687 | None:intergenic |
| AAGAATGGATTTGAGAAGTT+GGG | 0.391105 | 8.4:+13031785 | None:intergenic |
| GAAGAATGGATTTGAGAAGT+TGG | 0.397282 | 8.4:+13031784 | None:intergenic |
| AAGAATTTCCGAGCTAGAAT+AGG | 0.404065 | 8.4:+13031456 | None:intergenic |
| TGATCCAATCACCTTCCAAC+TGG | 0.405376 | 8.4:-13031970 | MS.gene060374:CDS |
| AGACCCAGTTGGAAGGTGAT+TGG | 0.409794 | 8.4:+13031966 | None:intergenic |
| ATGGCTGTATCTGGCTTTGA+AGG | 0.409980 | 8.4:-13032029 | MS.gene060374:CDS |
| GCATAGCTGAAACCATCTTC+TGG | 0.410267 | 8.4:+13031261 | None:intergenic |
| TTTCTATGGCAAAGATTTGA+AGG | 0.430183 | 8.4:+13031621 | None:intergenic |
| TCGTCATTGAAGCTTGTGTA+AGG | 0.431177 | 8.4:+13031669 | None:intergenic |
| TGCACAGTGGTTTCAGCAGT+TGG | 0.431217 | 8.4:-13031894 | MS.gene060374:CDS |
| ATAACATAGTACATGTGTTA+AGG | 0.454483 | 8.4:-13031209 | MS.gene060374:CDS |
| AGAATTTCCGAGCTAGAATA+GGG | 0.459819 | 8.4:+13031457 | None:intergenic |
| TGAGTGTGAAGAGGATTTAG+AGG | 0.469691 | 8.4:+13031584 | None:intergenic |
| CGGAAATTCTTCCGGCCACC+CGG | 0.469974 | 8.4:-13031444 | MS.gene060374:CDS |
| GTGAATGCAGTCGAGCCTCT+TGG | 0.477557 | 8.4:-13031102 | MS.gene060374:CDS |
| ATAGTGAATTAAAGGAAGAA+TGG | 0.485437 | 8.4:+13031770 | None:intergenic |
| AGAGGATTTAGAGGGCATGA+TGG | 0.487479 | 8.4:+13031593 | None:intergenic |
| CCTTGTGGATATTCAATGAA+TGG | 0.491016 | 8.4:-13031321 | MS.gene060374:CDS |
| TTCTTCCGGCCACCCGGAGA+TGG | 0.498491 | 8.4:-13031438 | MS.gene060374:CDS |
| GCTTTGAAGGATTTGAGAAA+CGG | 0.501692 | 8.4:-13032016 | MS.gene060374:CDS |
| ATTCATGTTACACCAGAAGA+TGG | 0.501825 | 8.4:-13031273 | MS.gene060374:CDS |
| GACTTTGCATTTGATCCTTG+TGG | 0.508004 | 8.4:-13031336 | MS.gene060374:CDS |
| GCCGGCATTAAACATTTCTC+CGG | 0.515988 | 8.4:+13031004 | None:intergenic |
| TGAAGGATTTGAGAAACGGT+TGG | 0.520330 | 8.4:-13032012 | MS.gene060374:CDS |
| GTAGGAGTCGTGCTGTCGAT+CGG | 0.527608 | 8.4:-13031071 | MS.gene060374:CDS |
| CTAAATCCTCTTCACACTCA+TGG | 0.535095 | 8.4:-13031581 | MS.gene060374:CDS |
| TGCTCTTGTCGCTACACAAG+AGG | 0.538275 | 8.4:-13031723 | MS.gene060374:CDS |
| TGAATGGAATGGATGATGAT+TGG | 0.540234 | 8.4:-13031305 | MS.gene060374:CDS |
| TTGAAGCTTGTGTAAGGGAA+AGG | 0.548951 | 8.4:+13031675 | None:intergenic |
| CTCTGTCATGCATATCTCCA+TGG | 0.549414 | 8.4:+13031485 | None:intergenic |
| TGGATATTCAATGAATGGAA+TGG | 0.555746 | 8.4:-13031316 | MS.gene060374:CDS |
| TATGCAAGCTTTGAATGCGT+TGG | 0.568343 | 8.4:-13031243 | MS.gene060374:CDS |
| TTCTATGGCAAAGATTTGAA+GGG | 0.570945 | 8.4:+13031622 | None:intergenic |
| TAATGAGATGTTGAAGAAGA+TGG | 0.572441 | 8.4:-13031124 | MS.gene060374:CDS |
| AGCCTCTTGGACTGAAATGT+AGG | 0.582524 | 8.4:-13031089 | MS.gene060374:CDS |
| AGTTAGACCCTATTCTAGCT+CGG | 0.587915 | 8.4:-13031464 | MS.gene060374:CDS |
| AAGATCATAATCAAAACTTG+TGG | 0.591582 | 8.4:-13031813 | MS.gene060374:CDS |
| CGTCATTGAAGCTTGTGTAA+GGG | 0.591601 | 8.4:+13031670 | None:intergenic |
| GATCCAATCACCTTCCAACT+GGG | 0.591867 | 8.4:-13031969 | MS.gene060374:CDS |
| CTCAGCCGGAAAAGAGATGA+CGG | 0.594514 | 8.4:-13031403 | MS.gene060374:CDS |
| ATCTTCTGGTGTAACATGAA+TGG | 0.598130 | 8.4:+13031275 | None:intergenic |
| CTCCTACATTTCAGTCCAAG+AGG | 0.608780 | 8.4:+13031087 | None:intergenic |
| TCTTAGTTGGATAAACAAAG+AGG | 0.610861 | 8.4:+13031832 | None:intergenic |
| CCATTCATTGAATATCCACA+AGG | 0.611208 | 8.4:+13031321 | None:intergenic |
| AAAACAACCATATCCGCCGC+GGG | 0.620904 | 8.4:+13031045 | None:intergenic |
| TGCTGTCGATCGGTTTCCCG+CGG | 0.625722 | 8.4:-13031061 | MS.gene060374:CDS |
| TGTCGATCGGTTTCCCGCGG+CGG | 0.636214 | 8.4:-13031058 | MS.gene060374:CDS |
| TTCTGGTGTAACATGAATGG+TGG | 0.639028 | 8.4:+13031278 | None:intergenic |
| GAGTGTGAAGAGGATTTAGA+GGG | 0.647633 | 8.4:+13031585 | None:intergenic |
| ATATAGACATAGTACCTGGT+CGG | 0.655930 | 8.4:+13031169 | None:intergenic |
| AACATGCCATGAGTGTGAAG+AGG | 0.667723 | 8.4:+13031575 | None:intergenic |
| ATTGATATAGACATAGTACC+TGG | 0.670482 | 8.4:+13031165 | None:intergenic |
| TGACAGTGATATCTTCACCA+TGG | 0.676549 | 8.4:-13031502 | MS.gene060374:CDS |
| AGAAGCTGTTCAATGCACAG+TGG | 0.728078 | 8.4:-13031907 | MS.gene060374:CDS |
| AGCGACAAGAGCATAAAGTG+AGG | 0.728752 | 8.4:+13031733 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGATCATAATCAAAACTTG+TGG | - | chr8.4:13031227-13031246 | MS.gene060374:CDS | 25.0% |
| ! | ATAACATAGTACATGTGTTA+AGG | - | chr8.4:13031831-13031850 | MS.gene060374:CDS | 25.0% |
| ! | ATAGTGAATTAAAGGAAGAA+TGG | + | chr8.4:13031273-13031292 | None:intergenic | 25.0% |
| !!! | GGTTGTTTTTCAAACTTTTA+CGG | - | chr8.4:13032009-13032028 | MS.gene060374:CDS | 25.0% |
| !!! | GTTTTGATTATGATCTTAGT+TGG | + | chr8.4:13031224-13031243 | None:intergenic | 25.0% |
| AAGTCACAAATGAATGCATT+TGG | + | chr8.4:13031689-13031708 | None:intergenic | 30.0% | |
| ATTCACTATGCAAACCAAAT+AGG | - | chr8.4:13031284-13031303 | MS.gene060374:CDS | 30.0% | |
| ATTGATATAGACATAGTACC+TGG | + | chr8.4:13031878-13031897 | None:intergenic | 30.0% | |
| TAATGAGATGTTGAAGAAGA+TGG | - | chr8.4:13031916-13031935 | MS.gene060374:CDS | 30.0% | |
| TCTTAGTTGGATAAACAAAG+AGG | + | chr8.4:13031211-13031230 | None:intergenic | 30.0% | |
| TGGATATTCAATGAATGGAA+TGG | - | chr8.4:13031724-13031743 | MS.gene060374:CDS | 30.0% | |
| TTCTATGGCAAAGATTTGAA+GGG | + | chr8.4:13031421-13031440 | None:intergenic | 30.0% | |
| TTTCTATGGCAAAGATTTGA+AGG | + | chr8.4:13031422-13031441 | None:intergenic | 30.0% | |
| ! | AAGAATGGATTTGAGAAGTT+GGG | + | chr8.4:13031258-13031277 | None:intergenic | 30.0% |
| ! | TGGTTTGCATAGTGAATTAA+AGG | + | chr8.4:13031281-13031300 | None:intergenic | 30.0% |
| AAGAATTTCCGAGCTAGAAT+AGG | + | chr8.4:13031587-13031606 | None:intergenic | 35.0% | |
| AGAATTTCCGAGCTAGAATA+GGG | + | chr8.4:13031586-13031605 | None:intergenic | 35.0% | |
| AGGGATAGTGTCTTCTAAAT+AGG | + | chr8.4:13031402-13031421 | None:intergenic | 35.0% | |
| ATATAGACATAGTACCTGGT+CGG | + | chr8.4:13031874-13031893 | None:intergenic | 35.0% | |
| ATCTTCTGGTGTAACATGAA+TGG | + | chr8.4:13031768-13031787 | None:intergenic | 35.0% | |
| ATTCATGTTACACCAGAAGA+TGG | - | chr8.4:13031767-13031786 | MS.gene060374:CDS | 35.0% | |
| CCATTCATTGAATATCCACA+AGG | + | chr8.4:13031722-13031741 | None:intergenic | 35.0% | |
| CCTTGTGGATATTCAATGAA+TGG | - | chr8.4:13031719-13031738 | MS.gene060374:CDS | 35.0% | |
| TGAATGGAATGGATGATGAT+TGG | - | chr8.4:13031735-13031754 | MS.gene060374:CDS | 35.0% | |
| ! | CAATTTTTCTTAGACCCAGT+TGG | + | chr8.4:13031088-13031107 | None:intergenic | 35.0% |
| ! | GAAGAATGGATTTGAGAAGT+TGG | + | chr8.4:13031259-13031278 | None:intergenic | 35.0% |
| !! | GCTTTGAAGGATTTGAGAAA+CGG | - | chr8.4:13031024-13031043 | MS.gene060374:CDS | 35.0% |
| AAGGGAAAGGTTGTGCATTT+GGG | + | chr8.4:13031355-13031374 | None:intergenic | 40.0% | |
| AGCATAAAGTGAGGCCTATT+TGG | + | chr8.4:13031301-13031320 | None:intergenic | 40.0% | |
| CGGTTGGAACTTCATTTCTT+TGG | - | chr8.4:13031044-13031063 | MS.gene060374:CDS | 40.0% | |
| CGTCATTGAAGCTTGTGTAA+GGG | + | chr8.4:13031373-13031392 | None:intergenic | 40.0% | |
| CTAAATCCTCTTCACACTCA+TGG | - | chr8.4:13031459-13031478 | MS.gene060374:CDS | 40.0% | |
| GACTTTGCATTTGATCCTTG+TGG | - | chr8.4:13031704-13031723 | MS.gene060374:CDS | 40.0% | |
| GAGTGTGAAGAGGATTTAGA+GGG | + | chr8.4:13031458-13031477 | None:intergenic | 40.0% | |
| TAAGGGAAAGGTTGTGCATT+TGG | + | chr8.4:13031356-13031375 | None:intergenic | 40.0% | |
| TCGTCATTGAAGCTTGTGTA+AGG | + | chr8.4:13031374-13031393 | None:intergenic | 40.0% | |
| TGAAGGATTTGAGAAACGGT+TGG | - | chr8.4:13031028-13031047 | MS.gene060374:CDS | 40.0% | |
| TGACAGTGATATCTTCACCA+TGG | - | chr8.4:13031538-13031557 | MS.gene060374:CDS | 40.0% | |
| TGAGTGTGAAGAGGATTTAG+AGG | + | chr8.4:13031459-13031478 | None:intergenic | 40.0% | |
| TTCTGGTGTAACATGAATGG+TGG | + | chr8.4:13031765-13031784 | None:intergenic | 40.0% | |
| TTGAAGCTTGTGTAAGGGAA+AGG | + | chr8.4:13031368-13031387 | None:intergenic | 40.0% | |
| ! | AGTTAGACCCTATTCTAGCT+CGG | - | chr8.4:13031576-13031595 | MS.gene060374:CDS | 40.0% |
| ! | TTTTCTTAGACCCAGTTGGA+AGG | + | chr8.4:13031084-13031103 | None:intergenic | 40.0% |
| !! | GCATGATGGAAGCTTTTCTA+TGG | + | chr8.4:13031436-13031455 | None:intergenic | 40.0% |
| !! | TATGCAAGCTTTGAATGCGT+TGG | - | chr8.4:13031797-13031816 | MS.gene060374:CDS | 40.0% |
| !! | TTCTAGCTCGGAAATTCTTC+CGG | - | chr8.4:13031588-13031607 | MS.gene060374:CDS | 40.0% |
| AAAAACAACCATATCCGCCG+CGG | + | chr8.4:13031999-13032018 | None:intergenic | 45.0% | |
| AACATGCCATGAGTGTGAAG+AGG | + | chr8.4:13031468-13031487 | None:intergenic | 45.0% | |
| AGAAGCTGTTCAATGCACAG+TGG | - | chr8.4:13031133-13031152 | MS.gene060374:CDS | 45.0% | |
| AGCCTCTTGGACTGAAATGT+AGG | - | chr8.4:13031951-13031970 | MS.gene060374:CDS | 45.0% | |
| CTCCTACATTTCAGTCCAAG+AGG | + | chr8.4:13031956-13031975 | None:intergenic | 45.0% | |
| CTCTGTCATGCATATCTCCA+TGG | + | chr8.4:13031558-13031577 | None:intergenic | 45.0% | |
| GATCCAATCACCTTCCAACT+GGG | - | chr8.4:13031071-13031090 | MS.gene060374:CDS | 45.0% | |
| GCATAGCTGAAACCATCTTC+TGG | + | chr8.4:13031782-13031801 | None:intergenic | 45.0% | |
| TGATCCAATCACCTTCCAAC+TGG | - | chr8.4:13031070-13031089 | MS.gene060374:CDS | 45.0% | |
| ! | AAGCTCCGTCATCTCTTTTC+CGG | + | chr8.4:13031645-13031664 | None:intergenic | 45.0% |
| ! | AGAGGATTTAGAGGGCATGA+TGG | + | chr8.4:13031450-13031469 | None:intergenic | 45.0% |
| ! | AGCGACAAGAGCATAAAGTG+AGG | + | chr8.4:13031310-13031329 | None:intergenic | 45.0% |
| ! | GTTGTTCAGATTTTCCGACC+AGG | - | chr8.4:13031857-13031876 | MS.gene060374:CDS | 45.0% |
| ! | TTCAAACTTTTACGGCTCGC+CGG | - | chr8.4:13032017-13032036 | MS.gene060374:CDS | 45.0% |
| !! | AAAGAGATGACGGAGCTTAC+TGG | - | chr8.4:13031647-13031666 | MS.gene060374:CDS | 45.0% |
| !! | ATGGCTGTATCTGGCTTTGA+AGG | - | chr8.4:13031011-13031030 | MS.gene060374:CDS | 45.0% |
| AAAACAACCATATCCGCCGC+GGG | + | chr8.4:13031998-13032017 | None:intergenic | 50.0% | |
| AGACCCAGTTGGAAGGTGAT+TGG | + | chr8.4:13031077-13031096 | None:intergenic | 50.0% | |
| CTCAGCCGGAAAAGAGATGA+CGG | - | chr8.4:13031637-13031656 | MS.gene060374:CDS | 50.0% | |
| TGCACAGTGGTTTCAGCAGT+TGG | - | chr8.4:13031146-13031165 | MS.gene060374:CDS | 50.0% | |
| TGCTCTTGTCGCTACACAAG+AGG | - | chr8.4:13031317-13031336 | MS.gene060374:CDS | 50.0% | |
| !!! | GTCACCGGTTTTTCCATCTC+CGG | + | chr8.4:13031618-13031637 | None:intergenic | 50.0% |
| !!! | TCACCGGTTTTTCCATCTCC+GGG | + | chr8.4:13031617-13031636 | None:intergenic | 50.0% |
| CCACCCGGAGATGGAAAAAC+CGG | - | chr8.4:13031611-13031630 | MS.gene060374:CDS | 55.0% | |
| GGAAAAACCGGTGACTCAGC+CGG | - | chr8.4:13031623-13031642 | MS.gene060374:CDS | 55.0% | |
| GTAGGAGTCGTGCTGTCGAT+CGG | - | chr8.4:13031969-13031988 | MS.gene060374:CDS | 55.0% | |
| GTGAATGCAGTCGAGCCTCT+TGG | - | chr8.4:13031938-13031957 | MS.gene060374:CDS | 55.0% | |
| ! | CTCTTTTCCGGCTGAGTCAC+CGG | + | chr8.4:13031633-13031652 | None:intergenic | 55.0% |
| ! | TTTTTCCATCTCCGGGTGGC+CGG | + | chr8.4:13031610-13031629 | None:intergenic | 55.0% |
| CGGAAATTCTTCCGGCCACC+CGG | - | chr8.4:13031596-13031615 | MS.gene060374:CDS | 60.0% | |
| ! | CCGGTTTTTCCATCTCCGGG+TGG | + | chr8.4:13031614-13031633 | None:intergenic | 60.0% |
| ! | TGCTGTCGATCGGTTTCCCG+CGG | - | chr8.4:13031979-13031998 | MS.gene060374:CDS | 60.0% |
| TCGGTTTCCCGCGGCGGATA+TGG | - | chr8.4:13031988-13032007 | MS.gene060374:CDS | 65.0% | |
| TTCTTCCGGCCACCCGGAGA+TGG | - | chr8.4:13031602-13031621 | MS.gene060374:CDS | 65.0% | |
| ! | TGTCGATCGGTTTCCCGCGG+CGG | - | chr8.4:13031982-13032001 | MS.gene060374:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 13031011 | 13032051 | 13031011 | ID=MS.gene060374 |
| chr8.4 | mRNA | 13031011 | 13032051 | 13031011 | ID=MS.gene060374.t1;Parent=MS.gene060374 |
| chr8.4 | exon | 13031011 | 13032051 | 13031011 | ID=MS.gene060374.t1.exon1;Parent=MS.gene060374.t1 |
| chr8.4 | CDS | 13031011 | 13032051 | 13031011 | ID=cds.MS.gene060374.t1;Parent=MS.gene060374.t1 |
| Gene Sequence |
| Protein sequence |
