Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31917.t1 | AFK48736.1 | 88.6 | 290 | 19 | 2 | 1 | 290 | 1 | 276 | 1.30E-68 | 270 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31917.t1 | Q9FZA2 | 45.9 | 135 | 64 | 3 | 163 | 290 | 227 | 359 | 1.8e-23 | 111.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31917.t1 | I3T894 | 88.6 | 290 | 19 | 2 | 1 | 290 | 1 | 276 | 9.2e-69 | 270.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene31917 | 0.818927 | 1.52E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene31917 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene050707 | MS.gene31917 | 0.876427 | 1.41E-68 | -1.69E-46 |
| MS.gene051914 | MS.gene31917 | 0.825471 | 4.60E-54 | -1.69E-46 |
| MS.gene052143 | MS.gene31917 | 0.804909 | 1.72E-49 | -1.69E-46 |
| MS.gene052308 | MS.gene31917 | 0.893057 | 8.96E-75 | -1.69E-46 |
| MS.gene053173 | MS.gene31917 | 0.841293 | 5.19E-58 | -1.69E-46 |
| MS.gene053348 | MS.gene31917 | 0.861221 | 1.20E-63 | -1.69E-46 |
| MS.gene054551 | MS.gene31917 | 0.870288 | 1.63E-66 | -1.69E-46 |
| MS.gene054552 | MS.gene31917 | 0.828563 | 8.38E-55 | -1.69E-46 |
| MS.gene054593 | MS.gene31917 | 0.880699 | 4.42E-70 | -1.69E-46 |
| MS.gene054614 | MS.gene31917 | 0.817784 | 2.76E-52 | -1.69E-46 |
| MS.gene054633 | MS.gene31917 | 0.835219 | 1.91E-56 | -1.69E-46 |
| MS.gene054850 | MS.gene31917 | 0.871193 | 8.24E-67 | -1.69E-46 |
| MS.gene054941 | MS.gene31917 | 0.847228 | 1.32E-59 | -1.69E-46 |
| MS.gene055308 | MS.gene31917 | 0.853672 | 2.05E-61 | -1.69E-46 |
| MS.gene055578 | MS.gene31917 | 0.852347 | 4.90E-61 | -1.69E-46 |
| MS.gene055579 | MS.gene31917 | 0.802411 | 5.68E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene31917 | 0.817491 | 3.21E-52 | -1.69E-46 |
| MS.gene056041 | MS.gene31917 | 0.869286 | 3.47E-66 | -1.69E-46 |
| MS.gene056042 | MS.gene31917 | 0.819259 | 1.28E-52 | -1.69E-46 |
| MS.gene05640 | MS.gene31917 | 0.839937 | 1.18E-57 | -1.69E-46 |
| MS.gene056528 | MS.gene31917 | 0.855628 | 5.55E-62 | -1.69E-46 |
| MS.gene05652 | MS.gene31917 | 0.868442 | 6.51E-66 | -1.69E-46 |
| MS.gene057458 | MS.gene31917 | 0.801342 | 9.42E-49 | -1.69E-46 |
| MS.gene057669 | MS.gene31917 | 0.830764 | 2.44E-55 | -1.69E-46 |
| MS.gene058128 | MS.gene31917 | 0.905707 | 3.23E-80 | -1.69E-46 |
| MS.gene058853 | MS.gene31917 | 0.899452 | 1.96E-77 | -1.69E-46 |
| MS.gene05926 | MS.gene31917 | 0.824556 | 7.57E-54 | -1.69E-46 |
| MS.gene059553 | MS.gene31917 | 0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene059616 | MS.gene31917 | 0.856843 | 2.44E-62 | -1.69E-46 |
| MS.gene059905 | MS.gene31917 | 0.880893 | 3.77E-70 | -1.69E-46 |
| MS.gene060374 | MS.gene31917 | 0.805438 | 1.34E-49 | -1.69E-46 |
| MS.gene060473 | MS.gene31917 | 0.825164 | 5.44E-54 | -1.69E-46 |
| MS.gene060565 | MS.gene31917 | 0.812283 | 4.58E-51 | -1.69E-46 |
| MS.gene060825 | MS.gene31917 | 0.834425 | 3.02E-56 | -1.69E-46 |
| MS.gene06093 | MS.gene31917 | 0.805795 | 1.12E-49 | -1.69E-46 |
| MS.gene061089 | MS.gene31917 | 0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene061099 | MS.gene31917 | 0.843351 | 1.48E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31917.t1 | MTR_4g088735 | 90.278 | 216 | 11 | 1 | 75 | 290 | 71 | 276 | 2.32e-96 | 285 |
| MS.gene31917.t1 | MTR_4g088740 | 46.210 | 409 | 90 | 10 | 1 | 288 | 1 | 400 | 6.57e-74 | 232 |
| MS.gene31917.t1 | MTR_1g055415 | 47.989 | 348 | 114 | 9 | 1 | 288 | 1 | 341 | 6.02e-73 | 228 |
| MS.gene31917.t1 | MTR_5g047890 | 48.209 | 363 | 90 | 12 | 1 | 288 | 1 | 340 | 2.75e-72 | 226 |
| MS.gene31917.t1 | MTR_4g046780 | 51.155 | 303 | 80 | 10 | 1 | 288 | 1 | 250 | 3.24e-68 | 213 |
| MS.gene31917.t1 | MTR_4g046767 | 45.484 | 310 | 82 | 10 | 16 | 288 | 16 | 275 | 2.78e-62 | 198 |
| MS.gene31917.t1 | MTR_3g012020 | 44.030 | 402 | 100 | 12 | 1 | 288 | 1 | 391 | 5.23e-61 | 198 |
| MS.gene31917.t1 | MTR_4g066680 | 56.989 | 186 | 63 | 3 | 105 | 290 | 170 | 338 | 8.48e-60 | 194 |
| MS.gene31917.t1 | MTR_6g042490 | 48.746 | 279 | 97 | 6 | 15 | 288 | 16 | 253 | 2.48e-52 | 172 |
| MS.gene31917.t1 | MTR_2g097240 | 66.929 | 127 | 41 | 1 | 162 | 288 | 214 | 339 | 3.61e-52 | 174 |
| MS.gene31917.t1 | MTR_4g017240 | 63.636 | 143 | 48 | 1 | 147 | 289 | 208 | 346 | 1.39e-46 | 160 |
| MS.gene31917.t1 | MTR_8g092230 | 48.047 | 256 | 91 | 10 | 51 | 289 | 65 | 295 | 1.74e-45 | 155 |
| MS.gene31917.t1 | MTR_4g124400 | 42.515 | 167 | 55 | 3 | 40 | 193 | 68 | 206 | 6.63e-21 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31917.t1 | AT2G34700 | 44.966 | 149 | 75 | 2 | 146 | 288 | 26 | 173 | 1.93e-37 | 131 |
| MS.gene31917.t1 | AT2G33790 | 37.681 | 207 | 118 | 5 | 93 | 290 | 35 | 239 | 1.24e-29 | 112 |
| MS.gene31917.t1 | AT1G28290 | 45.926 | 135 | 64 | 3 | 163 | 290 | 183 | 315 | 3.54e-29 | 113 |
| MS.gene31917.t1 | AT1G28290 | 45.926 | 135 | 64 | 3 | 163 | 290 | 227 | 359 | 4.96e-29 | 114 |
Find 124 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGGTGTTGATACTCTTT+TGG | 0.212871 | 4.1:+21171538 | MS.gene31917:CDS |
| TTGTGTGAGGAGGGTAAGTT+GGG | 0.250591 | 4.1:-21171085 | None:intergenic |
| GCATAGCTTGTGATGTTCTT+TGG | 0.271925 | 4.1:-21173463 | None:intergenic |
| AACCTTCATGGTGGTCTTAC+CGG | 0.294151 | 4.1:+21173541 | MS.gene31917:CDS |
| TGAACAGCTATAAAGCTTCT+AGG | 0.305603 | 4.1:-21171485 | None:intergenic |
| TTGGGAGCTACTCAAATTCT+TGG | 0.313293 | 4.1:+21171557 | MS.gene31917:CDS |
| GGGTGTAGAGGGGTGTTAAT+AGG | 0.318566 | 4.1:-21171221 | None:intergenic |
| TTGGAACAGGAGGGTGTAAT+GGG | 0.327634 | 4.1:-21171403 | None:intergenic |
| GTTGTGTGAGGAGGGTAAGT+TGG | 0.333157 | 4.1:-21171086 | None:intergenic |
| AACCGTTCTTATCAGTGGTC+TGG | 0.337205 | 4.1:-21173423 | None:intergenic |
| AGGGGTGTAGGATGCAATGG+TGG | 0.362731 | 4.1:-21171461 | None:intergenic |
| CTTAGCCACAAACGGCTTCT+CGG | 0.373734 | 4.1:-21173578 | None:intergenic |
| CGAGAAGCCGTTTGTGGCTA+AGG | 0.379375 | 4.1:+21173579 | MS.gene31917:CDS |
| GGTGGGTGTGCTGGAGCAGG+TGG | 0.379735 | 4.1:-21171443 | None:intergenic |
| GGGTGTAGTGGTGGATGTGC+TGG | 0.382371 | 4.1:-21171347 | None:intergenic |
| GGTGGTGGTGATGGTGGTGA+GGG | 0.385537 | 4.1:-21171163 | None:intergenic |
| TCCAACCGTGTAGAGAATAA+AGG | 0.386366 | 4.1:-21173608 | None:intergenic |
| GGAGCAACAGGTGTGTGGAC+TGG | 0.395530 | 4.1:-21171326 | None:intergenic |
| TTAAAGCCTTCGAACCTTCA+TGG | 0.396084 | 4.1:+21173529 | MS.gene31917:CDS |
| GAGCAACAGGTGTGTGGACT+GGG | 0.397889 | 4.1:-21171325 | None:intergenic |
| CCCTTTATTCTCTACACGGT+TGG | 0.398136 | 4.1:+21173607 | MS.gene31917:CDS |
| AGTGAATGTGGTGGTGGTGA+TGG | 0.399069 | 4.1:-21171172 | None:intergenic |
| TGGTGGTGGTGATGGTGGTG+AGG | 0.400493 | 4.1:-21171164 | None:intergenic |
| GTTGGTGGGTGAAGTGGAGC+TGG | 0.401765 | 4.1:-21171110 | None:intergenic |
| CAGGGGTTGGTGAGTGAATG+TGG | 0.410018 | 4.1:-21171184 | None:intergenic |
| GTCTTACCGGTGCTGGTCTT+AGG | 0.411218 | 4.1:+21173554 | MS.gene31917:CDS |
| GCGTTAGCCGGTGGGTGAAC+CGG | 0.414913 | 4.1:-21171140 | None:intergenic |
| GAGCAGGAGGGTGAGGATGA+TGG | 0.417914 | 4.1:-21171298 | None:intergenic |
| ACCGTTCTTATCAGTGGTCT+GGG | 0.419238 | 4.1:-21173422 | None:intergenic |
| GGTGAGGATGATGGTGGTGG+TGG | 0.424562 | 4.1:-21171289 | None:intergenic |
| TTCGAAGGCTTTAATCCATT+CGG | 0.425021 | 4.1:-21173520 | None:intergenic |
| GTTGGAACAGGAGGGTGTAA+TGG | 0.425934 | 4.1:-21171404 | None:intergenic |
| CATGGTGGTCTTACCGGTGC+TGG | 0.430807 | 4.1:+21173547 | MS.gene31917:CDS |
| TGGTGGTGAGGGGCGTTAGC+CGG | 0.434825 | 4.1:-21171152 | None:intergenic |
| CCGTGAGTTGGTGGTTTAGC+AGG | 0.434974 | 4.1:-21171266 | None:intergenic |
| GTGTGGACTGGGGAAGGAGC+AGG | 0.436294 | 4.1:-21171314 | None:intergenic |
| TTGGTGAGTGAATGTGGTGG+TGG | 0.439920 | 4.1:-21171178 | None:intergenic |
| TTAGCCACAAACGGCTTCTC+GGG | 0.442517 | 4.1:-21173577 | None:intergenic |
| AATGGTGGGTGTGCTGGAGC+AGG | 0.443203 | 4.1:-21171446 | None:intergenic |
| GAGGGTGAGGATGATGGTGG+TGG | 0.446074 | 4.1:-21171292 | None:intergenic |
| GGATGCAATGGTGGGTGTGC+TGG | 0.446386 | 4.1:-21171452 | None:intergenic |
| AGAAGCTTTATAGCTGTTCA+AGG | 0.449540 | 4.1:+21171488 | MS.gene31917:CDS |
| GCTGGAGCAGGTGGGTGTAA+TGG | 0.449877 | 4.1:-21171434 | None:intergenic |
| GGGGAAGGAGCAGGAGGGTG+AGG | 0.451502 | 4.1:-21171305 | None:intergenic |
| GTGTGAACAGGTGGGTGTAG+TGG | 0.456043 | 4.1:-21171359 | None:intergenic |
| GGTGGATGTGCTGGAGCAAC+AGG | 0.458900 | 4.1:-21171338 | None:intergenic |
| TGAACAGGTGGGTGTAGTGG+TGG | 0.461198 | 4.1:-21171356 | None:intergenic |
| AATGGAGGGTGAGTTGGAAC+AGG | 0.461672 | 4.1:-21171416 | None:intergenic |
| ATAGGAGAAGGAGTAGGAGC+AGG | 0.465341 | 4.1:-21171203 | None:intergenic |
| GGAGCAGGTGGGTGTAATGG+AGG | 0.467004 | 4.1:-21171431 | None:intergenic |
| GGGTGTAATGGAGGGTGAGT+TGG | 0.472310 | 4.1:-21171422 | None:intergenic |
| CCAACCGTGTAGAGAATAAA+GGG | 0.474781 | 4.1:-21173607 | None:intergenic |
| AATGGTAAGGAGGGTGTAGA+GGG | 0.479744 | 4.1:-21171232 | None:intergenic |
| TAGGAGAAGGAGTAGGAGCA+GGG | 0.480842 | 4.1:-21171202 | None:intergenic |
| GGAACAACAGGGGTGTGAAC+AGG | 0.484015 | 4.1:-21171371 | None:intergenic |
| TAGGCCCGAGAAGCCGTTTG+TGG | 0.488242 | 4.1:+21173573 | MS.gene31917:CDS |
| GTTGGTGGTTTAGCAGGTAC+AGG | 0.492827 | 4.1:-21171260 | None:intergenic |
| TGGTGGTGGCCGTGAGTTGG+TGG | 0.495728 | 4.1:-21171275 | None:intergenic |
| GGGGTGTAGGATGCAATGGT+GGG | 0.495833 | 4.1:-21171460 | None:intergenic |
| TGAACCGGTGACTTGGTTGG+TGG | 0.499429 | 4.1:-21171125 | None:intergenic |
| GGTGAGGGGCGTTAGCCGGT+GGG | 0.507227 | 4.1:-21171148 | None:intergenic |
| GAATGTGGTGGTGGTGATGG+TGG | 0.512130 | 4.1:-21171169 | None:intergenic |
| GAAGGAGTAGGAGCAGGGGT+TGG | 0.512859 | 4.1:-21171197 | None:intergenic |
| AGAGGGGTGTTAATAGGAGA+AGG | 0.513557 | 4.1:-21171215 | None:intergenic |
| TGGACTGGGGAAGGAGCAGG+AGG | 0.517336 | 4.1:-21171311 | None:intergenic |
| GAATGGTAAGGAGGGTGTAG+AGG | 0.518563 | 4.1:-21171233 | None:intergenic |
| GAACAGCTATAAAGCTTCTA+GGG | 0.519875 | 4.1:-21171484 | None:intergenic |
| GTAAAAGTAGCAATATTGCA+AGG | 0.527067 | 4.1:-21171013 | None:intergenic |
| GACTTGGTTGGTGGGTGAAG+TGG | 0.529058 | 4.1:-21171116 | None:intergenic |
| GAACCGGTGACTTGGTTGGT+GGG | 0.532249 | 4.1:-21171124 | None:intergenic |
| TGGTGGTGGTGGCCGTGAGT+TGG | 0.535050 | 4.1:-21171278 | None:intergenic |
| GGAAGACCCTTAGCCACAAA+CGG | 0.535213 | 4.1:-21173586 | None:intergenic |
| GTGGGTGTGCTGGAGCAGGT+GGG | 0.537085 | 4.1:-21171442 | None:intergenic |
| TGGTGAGGGGCGTTAGCCGG+TGG | 0.537298 | 4.1:-21171149 | None:intergenic |
| ACAACAGGGGTGTGAACAGG+TGG | 0.540027 | 4.1:-21171368 | None:intergenic |
| AAGCTTCTAGGGAGGGGTGT+AGG | 0.543464 | 4.1:-21171473 | None:intergenic |
| GGGTGAACCGGTGACTTGGT+TGG | 0.547932 | 4.1:-21171128 | None:intergenic |
| ACAGGTGTAGAATGGTAAGG+AGG | 0.548661 | 4.1:-21171242 | None:intergenic |
| GTGGTGGTGATGGTGGTGAG+GGG | 0.548870 | 4.1:-21171162 | None:intergenic |
| GAGGGTGAGTTGGAACAGGA+GGG | 0.549639 | 4.1:-21171412 | None:intergenic |
| ACAGGTGTGTGGACTGGGGA+AGG | 0.551806 | 4.1:-21171320 | None:intergenic |
| GAGCTGGTGTTGTGTGAGGA+GGG | 0.558920 | 4.1:-21171094 | None:intergenic |
| GTCAAATCTTGCAAGTATGC+TGG | 0.559072 | 4.1:+21171521 | MS.gene31917:CDS |
| GGAGGGTGAGTTGGAACAGG+AGG | 0.559242 | 4.1:-21171413 | None:intergenic |
| CGGTGGGTGAACCGGTGACT+TGG | 0.560182 | 4.1:-21171132 | None:intergenic |
| GTGTTAATAGGAGAAGGAGT+AGG | 0.561674 | 4.1:-21171209 | None:intergenic |
| GGAACAGGAGGGTGTAATGG+GGG | 0.562210 | 4.1:-21171401 | None:intergenic |
| GCTATAAAGCTTCTAGGGAG+GGG | 0.564039 | 4.1:-21171479 | None:intergenic |
| CAAGTCACCGGTTCACCCAC+CGG | 0.566063 | 4.1:+21171133 | MS.gene31917:CDS |
| TGGAACAGGAGGGTGTAATG+GGG | 0.566240 | 4.1:-21171402 | None:intergenic |
| CTCGGGCCTAAGACCAGCAC+CGG | 0.566604 | 4.1:-21173560 | None:intergenic |
| GAGAAGCCGTTTGTGGCTAA+GGG | 0.568492 | 4.1:+21173580 | MS.gene31917:CDS |
| CAGGAGGGTGAGGATGATGG+TGG | 0.571819 | 4.1:-21171295 | None:intergenic |
| AGCTATAAAGCTTCTAGGGA+GGG | 0.575095 | 4.1:-21171480 | None:intergenic |
| TAGCAGGTACAGGTGTAGAA+TGG | 0.575670 | 4.1:-21171250 | None:intergenic |
| GGGAGGGGTGTAGGATGCAA+TGG | 0.575724 | 4.1:-21171464 | None:intergenic |
| AAAATAACCGTTCTTATCAG+TGG | 0.576999 | 4.1:-21173428 | None:intergenic |
| GGTACAGGTGTAGAATGGTA+AGG | 0.578784 | 4.1:-21171245 | None:intergenic |
| TCACCCACCAACCAAGTCAC+CGG | 0.586790 | 4.1:+21171121 | MS.gene31917:CDS |
| CAGGTGTAGAATGGTAAGGA+GGG | 0.586995 | 4.1:-21171241 | None:intergenic |
| GGAGCTGGTGTTGTGTGAGG+AGG | 0.590088 | 4.1:-21171095 | None:intergenic |
| TAAAAGTAGCAATATTGCAA+GGG | 0.590364 | 4.1:-21171012 | None:intergenic |
| AGGAGAAGGAGTAGGAGCAG+GGG | 0.591648 | 4.1:-21171201 | None:intergenic |
| AGTGGAGCTGGTGTTGTGTG+AGG | 0.593333 | 4.1:-21171098 | None:intergenic |
| GGGGATGAGTTGGAACAACA+GGG | 0.598634 | 4.1:-21171382 | None:intergenic |
| GAGCAGGTGGGTGTAATGGA+GGG | 0.598759 | 4.1:-21171430 | None:intergenic |
| TCTTCCCTTTATTCTCTACA+CGG | 0.602477 | 4.1:+21173603 | MS.gene31917:CDS |
| CACCGGTAAGACCACCATGA+AGG | 0.605543 | 4.1:-21173543 | None:intergenic |
| CAACAACACAAAGTACAAGT+TGG | 0.607796 | 4.1:+21173390 | MS.gene31917:CDS |
| ATGGTAAGGAGGGTGTAGAG+GGG | 0.618924 | 4.1:-21171231 | None:intergenic |
| AGACCACCATGAAGGTTCGA+AGG | 0.625392 | 4.1:-21173535 | None:intergenic |
| GTGCTGGAGCAACAGGTGTG+TGG | 0.635755 | 4.1:-21171331 | None:intergenic |
| CAGCTATAAAGCTTCTAGGG+AGG | 0.636143 | 4.1:-21171481 | None:intergenic |
| CAACAGGGGTGTGAACAGGT+GGG | 0.648196 | 4.1:-21171367 | None:intergenic |
| GGGTTGGTGAGTGAATGTGG+TGG | 0.650934 | 4.1:-21171181 | None:intergenic |
| ACCCAGACCACTGATAAGAA+CGG | 0.652681 | 4.1:+21173421 | MS.gene31917:CDS |
| CCTGCTAAACCACCAACTCA+CGG | 0.657475 | 4.1:+21171266 | MS.gene31917:CDS |
| CATTTAGGCTCAAATGCAAG+AGG | 0.660159 | 4.1:-21173631 | None:intergenic |
| GGACTGGGGAAGGAGCAGGA+GGG | 0.674543 | 4.1:-21171310 | None:intergenic |
| GTTGCATTGAAGCTTCACAA+CGG | 0.689892 | 4.1:-21173371 | None:intergenic |
| AGCAACAGGTGTGTGGACTG+GGG | 0.697477 | 4.1:-21171324 | None:intergenic |
| GGGATGAGTTGGAACAACAG+GGG | 0.726853 | 4.1:-21171381 | None:intergenic |
| AAGCCTTCGAACCTTCATGG+TGG | 0.750456 | 4.1:+21173532 | MS.gene31917:CDS |
| TGTGTGAGGAGGGTAAGTTG+GGG | 0.787508 | 4.1:-21171084 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr4.1:21172447-21172466 | MS.gene31917:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr4.1:21172446-21172465 | MS.gene31917:intron | 10.0% |
| !!! | AAAAAATAGAGTATATTTTA+AGG | + | chr4.1:21173006-21173025 | MS.gene31917:intron | 10.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr4.1:21172448-21172467 | MS.gene31917:intron | 15.0% |
| !! | ATATTAGATGAACAAAAAAA+TGG | - | chr4.1:21172054-21172073 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr4.1:21172512-21172531 | MS.gene31917:intron | 15.0% |
| !! | TAAAATATGGAGTTAAAATA+TGG | - | chr4.1:21172653-21172672 | None:intergenic | 15.0% |
| !! | TATTAGATGAACAAAAAAAT+GGG | - | chr4.1:21172053-21172072 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr4.1:21172511-21172530 | MS.gene31917:intron | 15.0% |
| !! | TTTCAAAATACATAAAATGA+TGG | - | chr4.1:21173337-21173356 | None:intergenic | 15.0% |
| !!! | ATAATAGTACATTATTTTGT+TGG | + | chr4.1:21173254-21173273 | MS.gene31917:intron | 15.0% |
| !!! | CTATGAAAAATTTCTAATTT+TGG | - | chr4.1:21172746-21172765 | None:intergenic | 15.0% |
| !!! | TAAGTACATTAATTACTTTT+AGG | - | chr4.1:21172886-21172905 | None:intergenic | 15.0% |
| !!! | TAATAGTACATTATTTTGTT+GGG | + | chr4.1:21173255-21173274 | MS.gene31917:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr4.1:21172471-21172490 | MS.gene31917:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr4.1:21172544-21172563 | MS.gene31917:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr4.1:21172545-21172564 | MS.gene31917:intron | 20.0% |
| !! | TAATCATTGTTTGCAATTAA+GGG | + | chr4.1:21173112-21173131 | MS.gene31917:intron | 20.0% |
| !! | TCCAAAGTTTAGAAAAATAT+TGG | + | chr4.1:21172143-21172162 | MS.gene31917:intron | 20.0% |
| !! | TTAATCATTGTTTGCAATTA+AGG | + | chr4.1:21173111-21173130 | MS.gene31917:intron | 20.0% |
| !! | TTGAATTGAACTATGAATAT+TGG | + | chr4.1:21171859-21171878 | MS.gene31917:intron | 20.0% |
| !!! | AAAGTGAGTATTTTTCTATT+CGG | - | chr4.1:21172966-21172985 | None:intergenic | 20.0% |
| !!! | ACCAATATTTTTCTAAACTT+TGG | - | chr4.1:21172147-21172166 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr4.1:21172581-21172600 | MS.gene31917:intron | 20.0% |
| !!! | GTATTTTGAAATTGAATTGT+AGG | + | chr4.1:21173346-21173365 | MS.gene31917:intron | 20.0% |
| !!! | TTTTATTTCTTTACCATTCT+TGG | - | chr4.1:21173182-21173201 | None:intergenic | 20.0% |
| ! | AACAATGATTAAAGTTTCTC+CGG | - | chr4.1:21173103-21173122 | None:intergenic | 25.0% |
| ! | AACTTTGGATTTGTAAACTT+TGG | - | chr4.1:21172132-21172151 | None:intergenic | 25.0% |
| ! | AATATGGAGTTAAAATATGG+AGG | - | chr4.1:21172650-21172669 | None:intergenic | 25.0% |
| ! | ACTTTGGATTTGTAAACTTT+GGG | - | chr4.1:21172131-21172150 | None:intergenic | 25.0% |
| ! | ATCACAGATAAACCTAAAAA+GGG | - | chr4.1:21171992-21172011 | None:intergenic | 25.0% |
| ! | CTAAAAAGGGAATAATTGTT+AGG | - | chr4.1:21171979-21171998 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr4.1:21172470-21172489 | MS.gene31917:intron | 25.0% |
| ! | TAAAAGTAGCAATATTGCAA+GGG | - | chr4.1:21171015-21171034 | None:intergenic | 25.0% |
| !! | CTAACAATTATTCCCTTTTT+AGG | + | chr4.1:21171977-21171996 | MS.gene31917:intron | 25.0% |
| !!! | AACGGTTATTTTTTCATTGA+AGG | + | chr4.1:21173439-21173458 | MS.gene31917:CDS | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr4.1:21172580-21172599 | MS.gene31917:intron | 25.0% |
| !!! | TCATTTTTTTTGACAAGTCA+TGG | - | chr4.1:21172242-21172261 | None:intergenic | 25.0% |
| !!! | TGCTTACATGTGTTTTTTTA+GGG | - | chr4.1:21172301-21172320 | None:intergenic | 25.0% |
| !!! | TTGCTTACATGTGTTTTTTT+AGG | - | chr4.1:21172302-21172321 | None:intergenic | 25.0% |
| AAAATAACCGTTCTTATCAG+TGG | - | chr4.1:21173431-21173450 | None:intergenic | 30.0% | |
| AATATCTCTAGATCGTAGTA+CGG | + | chr4.1:21172917-21172936 | MS.gene31917:intron | 30.0% | |
| ACAATGATTAAAGTTTCTCC+GGG | - | chr4.1:21173102-21173121 | None:intergenic | 30.0% | |
| ACTGCTACAGTATAAAAGTA+AGG | + | chr4.1:21172680-21172699 | MS.gene31917:intron | 30.0% | |
| AGCAGTACTACGTTAAAATA+TGG | - | chr4.1:21172666-21172685 | None:intergenic | 30.0% | |
| CATCACAGATAAACCTAAAA+AGG | - | chr4.1:21171993-21172012 | None:intergenic | 30.0% | |
| CGTTGTCATATCAATGTAAA+AGG | - | chr4.1:21173282-21173301 | None:intergenic | 30.0% | |
| CTGCTACAGTATAAAAGTAA+GGG | + | chr4.1:21172681-21172700 | MS.gene31917:intron | 30.0% | |
| GTAAAAGTAGCAATATTGCA+AGG | - | chr4.1:21171016-21171035 | None:intergenic | 30.0% | |
| TCATAGTTCAATTCAAACAG+TGG | - | chr4.1:21171855-21171874 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr4.1:21172455-21172474 | MS.gene31917:intron | 30.0% | |
| TTAGGTTTATCTGTGATGTT+GGG | + | chr4.1:21171995-21172014 | MS.gene31917:intron | 30.0% | |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr4.1:21172558-21172577 | MS.gene31917:intron | 30.0% |
| ! | TTTAGGTTTATCTGTGATGT+TGG | + | chr4.1:21171994-21172013 | MS.gene31917:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr4.1:21172559-21172578 | MS.gene31917:intron | 30.0% |
| AATGTTAACATGTGCCCTAA+GGG | - | chr4.1:21172861-21172880 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr4.1:21172594-21172613 | MS.gene31917:intron | 35.0% | |
| AGAGGTCAAATAAATTGGGA+CGG | - | chr4.1:21172407-21172426 | None:intergenic | 35.0% | |
| AGCCAAGAGGTCAAATAAAT+TGG | - | chr4.1:21172412-21172431 | None:intergenic | 35.0% | |
| CAACAACACAAAGTACAAGT+TGG | + | chr4.1:21173390-21173409 | MS.gene31917:CDS | 35.0% | |
| CAATGATTAAAGTTTCTCCG+GGG | - | chr4.1:21173101-21173120 | None:intergenic | 35.0% | |
| CCATTAATCTCGTAGATCTA+CGG | - | chr4.1:21171937-21171956 | None:intergenic | 35.0% | |
| CGTAAAAAAGTTATGTTCCC+CGG | + | chr4.1:21173081-21173100 | MS.gene31917:intron | 35.0% | |
| CTAAAACGACAAAGTAGCTT+TGG | - | chr4.1:21173215-21173234 | None:intergenic | 35.0% | |
| GAACAGCTATAAAGCTTCTA+GGG | - | chr4.1:21171487-21171506 | None:intergenic | 35.0% | |
| GCCAAGAGGTCAAATAAATT+GGG | - | chr4.1:21172411-21172430 | None:intergenic | 35.0% | |
| TAGGTTTATCTGTGATGTTG+GGG | + | chr4.1:21171996-21172015 | MS.gene31917:intron | 35.0% | |
| TCCCAATTTATTTGACCTCT+TGG | + | chr4.1:21172407-21172426 | MS.gene31917:intron | 35.0% | |
| TCTTCCCTTTATTCTCTACA+CGG | + | chr4.1:21173603-21173622 | MS.gene31917:CDS | 35.0% | |
| TGAACAGCTATAAAGCTTCT+AGG | - | chr4.1:21171488-21171507 | None:intergenic | 35.0% | |
| ! | AGAAGCTTTATAGCTGTTCA+AGG | + | chr4.1:21171488-21171507 | MS.gene31917:CDS | 35.0% |
| ! | GTGTTAAGTACTGTTAAGAG+AGG | + | chr4.1:21173151-21173170 | MS.gene31917:intron | 35.0% |
| ! | TTCGAAGGCTTTAATCCATT+CGG | - | chr4.1:21173523-21173542 | None:intergenic | 35.0% |
| !! | AGTGTCGTTTAGCAACAAAA+AGG | - | chr4.1:21173312-21173331 | None:intergenic | 35.0% |
| AAGAGAGGAGAATCCAAGAA+TGG | + | chr4.1:21173166-21173185 | MS.gene31917:intron | 40.0% | |
| AGGTTTATCTGTGATGTTGG+GGG | + | chr4.1:21171997-21172016 | MS.gene31917:intron | 40.0% | |
| ATCGTAGTACGGTAGTACTT+TGG | + | chr4.1:21172928-21172947 | MS.gene31917:intron | 40.0% | |
| ATTCCCTAACATATGCCCTT+AGG | + | chr4.1:21172843-21172862 | MS.gene31917:intron | 40.0% | |
| CAATGTTAACATGTGCCCTA+AGG | - | chr4.1:21172862-21172881 | None:intergenic | 40.0% | |
| CATTTAGGCTCAAATGCAAG+AGG | - | chr4.1:21173634-21173653 | None:intergenic | 40.0% | |
| CCAACCGTGTAGAGAATAAA+GGG | - | chr4.1:21173610-21173629 | None:intergenic | 40.0% | |
| CCGTAGATCTACGAGATTAA+TGG | + | chr4.1:21171934-21171953 | MS.gene31917:intron | 40.0% | |
| CTTAGGGCACATGTTAACAT+TGG | + | chr4.1:21172860-21172879 | MS.gene31917:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr4.1:21172595-21172614 | MS.gene31917:intron | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | - | chr4.1:21172403-21172422 | None:intergenic | 40.0% | |
| GTCAAATCTTGCAAGTATGC+TGG | + | chr4.1:21171521-21171540 | MS.gene31917:CDS | 40.0% | |
| GTGTTAATAGGAGAAGGAGT+AGG | - | chr4.1:21171212-21171231 | None:intergenic | 40.0% | |
| GTTGCATTGAAGCTTCACAA+CGG | - | chr4.1:21173374-21173393 | None:intergenic | 40.0% | |
| TCCAACCGTGTAGAGAATAA+AGG | - | chr4.1:21173611-21173630 | None:intergenic | 40.0% | |
| TCGTAGTACGGTAGTACTTT+GGG | + | chr4.1:21172929-21172948 | MS.gene31917:intron | 40.0% | |
| TTAAAGCCTTCGAACCTTCA+TGG | + | chr4.1:21173529-21173548 | MS.gene31917:CDS | 40.0% | |
| TTCCCTAACATATGCCCTTA+GGG | + | chr4.1:21172844-21172863 | MS.gene31917:intron | 40.0% | |
| TTGCAATTAAGGGAACAGTG+TGG | + | chr4.1:21173122-21173141 | MS.gene31917:intron | 40.0% | |
| TTGGGAGCTACTCAAATTCT+TGG | + | chr4.1:21171557-21171576 | MS.gene31917:CDS | 40.0% | |
| ! | AGCTATAAAGCTTCTAGGGA+GGG | - | chr4.1:21171483-21171502 | None:intergenic | 40.0% |
| ! | CTTGTTATCTTGTGCCCTTA+GGG | + | chr4.1:21172705-21172724 | MS.gene31917:intron | 40.0% |
| ! | GCATAGCTTGTGATGTTCTT+TGG | - | chr4.1:21173466-21173485 | None:intergenic | 40.0% |
| ! | TCTTGTTATCTTGTGCCCTT+AGG | + | chr4.1:21172704-21172723 | MS.gene31917:intron | 40.0% |
| !! | ATTCCTTAACTTGTGCCCTA+AGG | - | chr4.1:21172723-21172742 | None:intergenic | 40.0% |
| !! | TTCCTTAACTTGTGCCCTAA+GGG | - | chr4.1:21172722-21172741 | None:intergenic | 40.0% |
| !!! | GCTGGTGTTGATACTCTTTT+GGG | + | chr4.1:21171539-21171558 | MS.gene31917:CDS | 40.0% |
| !!! | TATCAGTGGTCTGGGTTTTT+TGG | - | chr4.1:21173417-21173436 | None:intergenic | 40.0% |
| !!! | TGCTGGTGTTGATACTCTTT+TGG | + | chr4.1:21171538-21171557 | MS.gene31917:CDS | 40.0% |
| AAAAAATACTCCCTCCGTCC+CGG | - | chr4.1:21172616-21172635 | None:intergenic | 45.0% | |
| AACCGTTCTTATCAGTGGTC+TGG | - | chr4.1:21173426-21173445 | None:intergenic | 45.0% | |
| ACAGGTGTAGAATGGTAAGG+AGG | - | chr4.1:21171245-21171264 | None:intergenic | 45.0% | |
| ACCCAGACCACTGATAAGAA+CGG | + | chr4.1:21173421-21173440 | MS.gene31917:CDS | 45.0% | |
| ACCGTTCTTATCAGTGGTCT+GGG | - | chr4.1:21173425-21173444 | None:intergenic | 45.0% | |
| AGTACGGTAGTACTTTGGGT+AGG | + | chr4.1:21172933-21172952 | MS.gene31917:intron | 45.0% | |
| CAGGTGTAGAATGGTAAGGA+GGG | - | chr4.1:21171244-21171263 | None:intergenic | 45.0% | |
| CCCTTTATTCTCTACACGGT+TGG | + | chr4.1:21173607-21173626 | MS.gene31917:CDS | 45.0% | |
| GGTACAGGTGTAGAATGGTA+AGG | - | chr4.1:21171248-21171267 | None:intergenic | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | - | chr4.1:21172404-21172423 | None:intergenic | 45.0% | |
| GTACGGTAGTACTTTGGGTA+GGG | + | chr4.1:21172934-21172953 | MS.gene31917:intron | 45.0% | |
| TACGGTAGTACTTTGGGTAG+GGG | + | chr4.1:21172935-21172954 | MS.gene31917:intron | 45.0% | |
| TAGCAGGTACAGGTGTAGAA+TGG | - | chr4.1:21171253-21171272 | None:intergenic | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+AGG | - | chr4.1:21172425-21172444 | None:intergenic | 45.0% | |
| TTGTGTGAGGAGGGTAAGTT+GGG | - | chr4.1:21171088-21171107 | None:intergenic | 45.0% | |
| ! | AACCTTCATGGTGGTCTTAC+CGG | + | chr4.1:21173541-21173560 | MS.gene31917:CDS | 45.0% |
| ! | AATGGTAAGGAGGGTGTAGA+GGG | - | chr4.1:21171235-21171254 | None:intergenic | 45.0% |
| ! | CAGCTATAAAGCTTCTAGGG+AGG | - | chr4.1:21171484-21171503 | None:intergenic | 45.0% |
| ! | GCTATAAAGCTTCTAGGGAG+GGG | - | chr4.1:21171482-21171501 | None:intergenic | 45.0% |
| ! | TGCCCTAAGGGCATATGTTA+GGG | - | chr4.1:21172849-21172868 | None:intergenic | 45.0% |
| ! | TTGGAACAGGAGGGTGTAAT+GGG | - | chr4.1:21171406-21171425 | None:intergenic | 45.0% |
| !! | AGAGGGGTGTTAATAGGAGA+AGG | - | chr4.1:21171218-21171237 | None:intergenic | 45.0% |
| !! | GTTTTAGTCAGTGCACCGAA+TGG | + | chr4.1:21173505-21173524 | MS.gene31917:CDS | 45.0% |
| !!! | GGACGGAGGGAGTATTTTTT+AGG | + | chr4.1:21172616-21172635 | MS.gene31917:intron | 45.0% |
| AAGCCTTCGAACCTTCATGG+TGG | + | chr4.1:21173532-21173551 | MS.gene31917:CDS | 50.0% | |
| AGACCACCATGAAGGTTCGA+AGG | - | chr4.1:21173538-21173557 | None:intergenic | 50.0% | |
| ATAGGAGAAGGAGTAGGAGC+AGG | - | chr4.1:21171206-21171225 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr4.1:21172599-21172618 | MS.gene31917:intron | 50.0% | |
| CCTGCTAAACCACCAACTCA+CGG | + | chr4.1:21171266-21171285 | MS.gene31917:CDS | 50.0% | |
| CTTAGCCACAAACGGCTTCT+CGG | - | chr4.1:21173581-21173600 | None:intergenic | 50.0% | |
| GAGAAGCCGTTTGTGGCTAA+GGG | + | chr4.1:21173580-21173599 | MS.gene31917:CDS | 50.0% | |
| GGAAGACCCTTAGCCACAAA+CGG | - | chr4.1:21173589-21173608 | None:intergenic | 50.0% | |
| GTTGTGTGAGGAGGGTAAGT+TGG | - | chr4.1:21171089-21171108 | None:intergenic | 50.0% | |
| TAGGAGAAGGAGTAGGAGCA+GGG | - | chr4.1:21171205-21171224 | None:intergenic | 50.0% | |
| TGCCCTTAGGGCACAAGTTA+AGG | + | chr4.1:21172717-21172736 | MS.gene31917:intron | 50.0% | |
| TGTGTGAGGAGGGTAAGTTG+GGG | - | chr4.1:21171087-21171106 | None:intergenic | 50.0% | |
| TTAGCCACAAACGGCTTCTC+GGG | - | chr4.1:21173580-21173599 | None:intergenic | 50.0% | |
| TTGGTGAGTGAATGTGGTGG+TGG | - | chr4.1:21171181-21171200 | None:intergenic | 50.0% | |
| ! | AATGGAGGGTGAGTTGGAAC+AGG | - | chr4.1:21171419-21171438 | None:intergenic | 50.0% |
| ! | ATGGTAAGGAGGGTGTAGAG+GGG | - | chr4.1:21171234-21171253 | None:intergenic | 50.0% |
| ! | GAATGGTAAGGAGGGTGTAG+AGG | - | chr4.1:21171236-21171255 | None:intergenic | 50.0% |
| ! | GGGATGAGTTGGAACAACAG+GGG | - | chr4.1:21171384-21171403 | None:intergenic | 50.0% |
| ! | GGGGATGAGTTGGAACAACA+GGG | - | chr4.1:21171385-21171404 | None:intergenic | 50.0% |
| ! | GTGCCCTAAGGGCATATGTT+AGG | - | chr4.1:21172850-21172869 | None:intergenic | 50.0% |
| ! | GTTGGAACAGGAGGGTGTAA+TGG | - | chr4.1:21171407-21171426 | None:intergenic | 50.0% |
| ! | TGGAACAGGAGGGTGTAATG+GGG | - | chr4.1:21171405-21171424 | None:intergenic | 50.0% |
| !! | AGTGAATGTGGTGGTGGTGA+TGG | - | chr4.1:21171175-21171194 | None:intergenic | 50.0% |
| !! | GGGTGTAGAGGGGTGTTAAT+AGG | - | chr4.1:21171224-21171243 | None:intergenic | 50.0% |
| !! | GTGATGTTGGGGGTACTCTT+GGG | + | chr4.1:21172007-21172026 | MS.gene31917:intron | 50.0% |
| !! | GTTGGTGGTTTAGCAGGTAC+AGG | - | chr4.1:21171263-21171282 | None:intergenic | 50.0% |
| !! | TGTGATGTTGGGGGTACTCT+TGG | + | chr4.1:21172006-21172025 | MS.gene31917:intron | 50.0% |
| AGGAGAAGGAGTAGGAGCAG+GGG | - | chr4.1:21171204-21171223 | None:intergenic | 55.0% | |
| CACCGGTAAGACCACCATGA+AGG | - | chr4.1:21173546-21173565 | None:intergenic | 55.0% | |
| CGAGAAGCCGTTTGTGGCTA+AGG | + | chr4.1:21173579-21173598 | MS.gene31917:CDS | 55.0% | |
| GAGCAACAGGTGTGTGGACT+GGG | - | chr4.1:21171328-21171347 | None:intergenic | 55.0% | |
| GGGGTGTAGGATGCAATGGT+GGG | - | chr4.1:21171463-21171482 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr4.1:21172603-21172622 | MS.gene31917:intron | 55.0% | |
| GTGTGAACAGGTGGGTGTAG+TGG | - | chr4.1:21171362-21171381 | None:intergenic | 55.0% | |
| TCACCCACCAACCAAGTCAC+CGG | + | chr4.1:21171121-21171140 | MS.gene31917:CDS | 55.0% | |
| TGAACAGGTGGGTGTAGTGG+TGG | - | chr4.1:21171359-21171378 | None:intergenic | 55.0% | |
| ! | AAGCTTCTAGGGAGGGGTGT+AGG | - | chr4.1:21171476-21171495 | None:intergenic | 55.0% |
| ! | ACAACAGGGGTGTGAACAGG+TGG | - | chr4.1:21171371-21171390 | None:intergenic | 55.0% |
| ! | AGCAACAGGTGTGTGGACTG+GGG | - | chr4.1:21171327-21171346 | None:intergenic | 55.0% |
| ! | AGGGGTGTAGGATGCAATGG+TGG | - | chr4.1:21171464-21171483 | None:intergenic | 55.0% |
| ! | CAACAGGGGTGTGAACAGGT+GGG | - | chr4.1:21171370-21171389 | None:intergenic | 55.0% |
| ! | GAGCAGGTGGGTGTAATGGA+GGG | - | chr4.1:21171433-21171452 | None:intergenic | 55.0% |
| ! | GAGGGTGAGTTGGAACAGGA+GGG | - | chr4.1:21171415-21171434 | None:intergenic | 55.0% |
| ! | GGAACAACAGGGGTGTGAAC+AGG | - | chr4.1:21171374-21171393 | None:intergenic | 55.0% |
| ! | GGAACAGGAGGGTGTAATGG+GGG | - | chr4.1:21171404-21171423 | None:intergenic | 55.0% |
| ! | GGGGGATGAGTTGGAACAAC+AGG | - | chr4.1:21171386-21171405 | None:intergenic | 55.0% |
| ! | GGGTGTAATGGAGGGTGAGT+TGG | - | chr4.1:21171425-21171444 | None:intergenic | 55.0% |
| ! | GGGTGTAATGGGGGATGAGT+TGG | - | chr4.1:21171395-21171414 | None:intergenic | 55.0% |
| !! | AGTGGAGCTGGTGTTGTGTG+AGG | - | chr4.1:21171101-21171120 | None:intergenic | 55.0% |
| !! | CAGGGGTTGGTGAGTGAATG+TGG | - | chr4.1:21171187-21171206 | None:intergenic | 55.0% |
| !! | CCGTGAGTTGGTGGTTTAGC+AGG | - | chr4.1:21171269-21171288 | None:intergenic | 55.0% |
| !! | GAACCGGTGACTTGGTTGGT+GGG | - | chr4.1:21171127-21171146 | None:intergenic | 55.0% |
| !! | GAATGTGGTGGTGGTGATGG+TGG | - | chr4.1:21171172-21171191 | None:intergenic | 55.0% |
| !! | GACTTGGTTGGTGGGTGAAG+TGG | - | chr4.1:21171119-21171138 | None:intergenic | 55.0% |
| !! | GAGCTGGTGTTGTGTGAGGA+GGG | - | chr4.1:21171097-21171116 | None:intergenic | 55.0% |
| !! | GGGTTGGTGAGTGAATGTGG+TGG | - | chr4.1:21171184-21171203 | None:intergenic | 55.0% |
| !! | GTCTTACCGGTGCTGGTCTT+AGG | + | chr4.1:21173554-21173573 | MS.gene31917:CDS | 55.0% |
| !! | TGAACCGGTGACTTGGTTGG+TGG | - | chr4.1:21171128-21171147 | None:intergenic | 55.0% |
| GAAGGAGTAGGAGCAGGGGT+TGG | - | chr4.1:21171200-21171219 | None:intergenic | 60.0% | |
| GAGCAGGAGGGTGAGGATGA+TGG | - | chr4.1:21171301-21171320 | None:intergenic | 60.0% | |
| GCTGGAGCAGGTGGGTGTAA+TGG | - | chr4.1:21171437-21171456 | None:intergenic | 60.0% | |
| GGAGCAACAGGTGTGTGGAC+TGG | - | chr4.1:21171329-21171348 | None:intergenic | 60.0% | |
| GGAGCAGGTGGGTGTAATGG+AGG | - | chr4.1:21171434-21171453 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr4.1:21172602-21172621 | MS.gene31917:intron | 60.0% | |
| GGTGGATGTGCTGGAGCAAC+AGG | - | chr4.1:21171341-21171360 | None:intergenic | 60.0% | |
| GTGCTGGAGCAACAGGTGTG+TGG | - | chr4.1:21171334-21171353 | None:intergenic | 60.0% | |
| TAGGCCCGAGAAGCCGTTTG+TGG | + | chr4.1:21173573-21173592 | MS.gene31917:CDS | 60.0% | |
| ! | CAGGAGGGTGAGGATGATGG+TGG | - | chr4.1:21171298-21171317 | None:intergenic | 60.0% |
| ! | CATGGTGGTCTTACCGGTGC+TGG | + | chr4.1:21173547-21173566 | MS.gene31917:CDS | 60.0% |
| ! | GGAGGGTGAGTTGGAACAGG+AGG | - | chr4.1:21171416-21171435 | None:intergenic | 60.0% |
| ! | GGGAGGGGTGTAGGATGCAA+TGG | - | chr4.1:21171467-21171486 | None:intergenic | 60.0% |
| ! | GTTGGTGGGTGAAGTGGAGC+TGG | - | chr4.1:21171113-21171132 | None:intergenic | 60.0% |
| !! | AATGGTGGGTGTGCTGGAGC+AGG | - | chr4.1:21171449-21171468 | None:intergenic | 60.0% |
| !! | ACAGGTGTGTGGACTGGGGA+AGG | - | chr4.1:21171323-21171342 | None:intergenic | 60.0% |
| !! | CAAGTCACCGGTTCACCCAC+CGG | + | chr4.1:21171133-21171152 | MS.gene31917:CDS | 60.0% |
| !! | GAGGGTGAGGATGATGGTGG+TGG | - | chr4.1:21171295-21171314 | None:intergenic | 60.0% |
| !! | GGAGCTGGTGTTGTGTGAGG+AGG | - | chr4.1:21171098-21171117 | None:intergenic | 60.0% |
| !! | GGATGCAATGGTGGGTGTGC+TGG | - | chr4.1:21171455-21171474 | None:intergenic | 60.0% |
| !! | GGGTGAACCGGTGACTTGGT+TGG | - | chr4.1:21171131-21171150 | None:intergenic | 60.0% |
| !! | GGGTGTAGTGGTGGATGTGC+TGG | - | chr4.1:21171350-21171369 | None:intergenic | 60.0% |
| !! | GGTGAGGATGATGGTGGTGG+TGG | - | chr4.1:21171292-21171311 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGATGGTGGTGA+GGG | - | chr4.1:21171166-21171185 | None:intergenic | 60.0% |
| !! | GTGGTGGTGATGGTGGTGAG+GGG | - | chr4.1:21171165-21171184 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTGATGGTGGTG+AGG | - | chr4.1:21171167-21171186 | None:intergenic | 60.0% |
| CGGTGGGTGAACCGGTGACT+TGG | - | chr4.1:21171135-21171154 | None:intergenic | 65.0% | |
| CTCGGGCCTAAGACCAGCAC+CGG | - | chr4.1:21173563-21173582 | None:intergenic | 65.0% | |
| GCGTTAGCCGGTGGGTGAAC+CGG | - | chr4.1:21171143-21171162 | None:intergenic | 65.0% | |
| GGACTGGGGAAGGAGCAGGA+GGG | - | chr4.1:21171313-21171332 | None:intergenic | 65.0% | |
| GTGGGTGTGCTGGAGCAGGT+GGG | - | chr4.1:21171445-21171464 | None:intergenic | 65.0% | |
| ! | TGGACTGGGGAAGGAGCAGG+AGG | - | chr4.1:21171314-21171333 | None:intergenic | 65.0% |
| !! | GTGTGGACTGGGGAAGGAGC+AGG | - | chr4.1:21171317-21171336 | None:intergenic | 65.0% |
| !! | TGGTGGTGAGGGGCGTTAGC+CGG | - | chr4.1:21171155-21171174 | None:intergenic | 65.0% |
| !! | TGGTGGTGGCCGTGAGTTGG+TGG | - | chr4.1:21171278-21171297 | None:intergenic | 65.0% |
| !! | TGGTGGTGGTGGCCGTGAGT+TGG | - | chr4.1:21171281-21171300 | None:intergenic | 65.0% |
| GGGGAAGGAGCAGGAGGGTG+AGG | - | chr4.1:21171308-21171327 | None:intergenic | 70.0% | |
| GGTGGGTGTGCTGGAGCAGG+TGG | - | chr4.1:21171446-21171465 | None:intergenic | 70.0% | |
| !! | GGTGAGGGGCGTTAGCCGGT+GGG | - | chr4.1:21171151-21171170 | None:intergenic | 70.0% |
| !! | TGGTGAGGGGCGTTAGCCGG+TGG | - | chr4.1:21171152-21171171 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 21171002 | 21173663 | 21171002 | ID=MS.gene31917 |
| chr4.1 | mRNA | 21171002 | 21173663 | 21171002 | ID=MS.gene31917.t1;Parent=MS.gene31917 |
| chr4.1 | exon | 21171002 | 21171578 | 21171002 | ID=MS.gene31917.t1.exon1;Parent=MS.gene31917.t1 |
| chr4.1 | CDS | 21171002 | 21171578 | 21171002 | ID=cds.MS.gene31917.t1;Parent=MS.gene31917.t1 |
| chr4.1 | exon | 21173368 | 21173663 | 21173368 | ID=MS.gene31917.t1.exon2;Parent=MS.gene31917.t1 |
| chr4.1 | CDS | 21173368 | 21173663 | 21173368 | ID=cds.MS.gene31917.t1;Parent=MS.gene31917.t1 |
| Gene Sequence |
| Protein sequence |
