Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33809.t1 | AFK48736.1 | 89.7 | 290 | 16 | 2 | 1 | 290 | 1 | 276 | 9.70E-69 | 270.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33809.t1 | Q9FZA2 | 45.9 | 135 | 64 | 3 | 163 | 290 | 227 | 359 | 1.8e-23 | 111.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33809.t1 | I3T894 | 89.7 | 290 | 16 | 2 | 1 | 290 | 1 | 276 | 7.0e-69 | 270.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049298 | MS.gene33809 | 0.822029 | 2.95E-53 | -1.69E-46 |
| MS.gene050338 | MS.gene33809 | 0.843861 | 1.08E-58 | -1.69E-46 |
| MS.gene05054 | MS.gene33809 | 0.805876 | 1.08E-49 | -1.69E-46 |
| MS.gene050707 | MS.gene33809 | 0.878132 | 3.60E-69 | -1.69E-46 |
| MS.gene051914 | MS.gene33809 | 0.830024 | 3.71E-55 | -1.69E-46 |
| MS.gene051955 | MS.gene33809 | 0.804133 | 2.50E-49 | -1.69E-46 |
| MS.gene052143 | MS.gene33809 | 0.816963 | 4.22E-52 | -1.69E-46 |
| MS.gene052308 | MS.gene33809 | 0.887936 | 9.20E-73 | -1.69E-46 |
| MS.gene052367 | MS.gene33809 | 0.8095 | 1.84E-50 | -1.69E-46 |
| MS.gene052383 | MS.gene33809 | 0.81642 | 5.58E-52 | -1.69E-46 |
| MS.gene053173 | MS.gene33809 | 0.852764 | 3.73E-61 | -1.69E-46 |
| MS.gene053348 | MS.gene33809 | 0.869442 | 3.09E-66 | -1.69E-46 |
| MS.gene054551 | MS.gene33809 | 0.882366 | 1.11E-70 | -1.69E-46 |
| MS.gene054552 | MS.gene33809 | 0.837658 | 4.57E-57 | -1.69E-46 |
| MS.gene054593 | MS.gene33809 | 0.8842 | 2.35E-71 | -1.69E-46 |
| MS.gene054614 | MS.gene33809 | 0.837771 | 4.27E-57 | -1.69E-46 |
| MS.gene054633 | MS.gene33809 | 0.839239 | 1.78E-57 | -1.69E-46 |
| MS.gene054850 | MS.gene33809 | 0.867625 | 1.19E-65 | -1.69E-46 |
| MS.gene054941 | MS.gene33809 | 0.858011 | 1.10E-62 | -1.69E-46 |
| MS.gene055308 | MS.gene33809 | 0.852512 | 4.40E-61 | -1.69E-46 |
| MS.gene055578 | MS.gene33809 | 0.844935 | 5.55E-59 | -1.69E-46 |
| MS.gene055957 | MS.gene33809 | 0.819364 | 1.21E-52 | -1.69E-46 |
| MS.gene056041 | MS.gene33809 | 0.876049 | 1.90E-68 | -1.69E-46 |
| MS.gene056042 | MS.gene33809 | 0.823841 | 1.11E-53 | -1.69E-46 |
| MS.gene05640 | MS.gene33809 | 0.841049 | 6.01E-58 | -1.69E-46 |
| MS.gene056526 | MS.gene33809 | 0.808875 | 2.50E-50 | -1.69E-46 |
| MS.gene056528 | MS.gene33809 | 0.859741 | 3.35E-63 | -1.69E-46 |
| MS.gene05652 | MS.gene33809 | 0.867187 | 1.65E-65 | -1.69E-46 |
| MS.gene056618 | MS.gene33809 | 0.802747 | 4.85E-49 | -1.69E-46 |
| MS.gene056870 | MS.gene33809 | 0.813578 | 2.38E-51 | -1.69E-46 |
| MS.gene057458 | MS.gene33809 | 0.80369 | 3.09E-49 | -1.69E-46 |
| MS.gene057669 | MS.gene33809 | 0.829836 | 4.12E-55 | -1.69E-46 |
| MS.gene058128 | MS.gene33809 | 0.893804 | 4.47E-75 | -1.69E-46 |
| MS.gene058853 | MS.gene33809 | 0.899598 | 1.69E-77 | -1.69E-46 |
| MS.gene05926 | MS.gene33809 | 0.840992 | 6.23E-58 | -1.69E-46 |
| MS.gene059553 | MS.gene33809 | 0.823239 | 1.54E-53 | -1.69E-46 |
| MS.gene059616 | MS.gene33809 | 0.848593 | 5.55E-60 | -1.69E-46 |
| MS.gene059905 | MS.gene33809 | 0.869585 | 2.77E-66 | -1.69E-46 |
| MS.gene060374 | MS.gene33809 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene060473 | MS.gene33809 | 0.840012 | 1.12E-57 | -1.69E-46 |
| MS.gene060565 | MS.gene33809 | 0.826952 | 2.05E-54 | -1.69E-46 |
| MS.gene060825 | MS.gene33809 | 0.832529 | 8.98E-56 | -1.69E-46 |
| MS.gene06093 | MS.gene33809 | 0.814355 | 1.61E-51 | -1.69E-46 |
| MS.gene061099 | MS.gene33809 | 0.849151 | 3.89E-60 | -1.69E-46 |
| MS.gene061260 | MS.gene33809 | 0.803927 | 2.76E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33809.t1 | MTR_4g088735 | 90.741 | 216 | 10 | 1 | 75 | 290 | 71 | 276 | 1.03e-97 | 288 |
| MS.gene33809.t1 | MTR_4g046780 | 56.055 | 289 | 87 | 9 | 1 | 288 | 1 | 250 | 4.50e-75 | 230 |
| MS.gene33809.t1 | MTR_4g088740 | 46.455 | 409 | 89 | 10 | 1 | 288 | 1 | 400 | 1.92e-74 | 233 |
| MS.gene33809.t1 | MTR_1g055415 | 48.276 | 348 | 113 | 9 | 1 | 288 | 1 | 341 | 1.23e-73 | 229 |
| MS.gene33809.t1 | MTR_5g047890 | 48.485 | 363 | 89 | 12 | 1 | 288 | 1 | 340 | 4.10e-73 | 228 |
| MS.gene33809.t1 | MTR_4g046767 | 45.806 | 310 | 81 | 10 | 16 | 288 | 16 | 275 | 2.87e-63 | 201 |
| MS.gene33809.t1 | MTR_3g012020 | 44.279 | 402 | 99 | 12 | 1 | 288 | 1 | 391 | 1.07e-61 | 200 |
| MS.gene33809.t1 | MTR_4g066680 | 56.989 | 186 | 63 | 3 | 105 | 290 | 170 | 338 | 8.13e-60 | 194 |
| MS.gene33809.t1 | MTR_6g042490 | 49.104 | 279 | 96 | 6 | 15 | 288 | 16 | 253 | 2.92e-52 | 172 |
| MS.gene33809.t1 | MTR_2g097240 | 66.929 | 127 | 41 | 1 | 162 | 288 | 214 | 339 | 3.28e-52 | 174 |
| MS.gene33809.t1 | MTR_4g017240 | 63.636 | 143 | 48 | 1 | 147 | 289 | 208 | 346 | 1.44e-46 | 160 |
| MS.gene33809.t1 | MTR_8g092230 | 48.438 | 256 | 90 | 10 | 51 | 289 | 65 | 295 | 1.74e-46 | 158 |
| MS.gene33809.t1 | MTR_4g124400 | 43.114 | 167 | 54 | 3 | 40 | 193 | 68 | 206 | 8.52e-22 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33809.t1 | AT2G34700 | 44.966 | 149 | 75 | 2 | 146 | 288 | 26 | 173 | 1.99e-37 | 131 |
| MS.gene33809.t1 | AT2G33790 | 37.681 | 207 | 118 | 5 | 93 | 290 | 35 | 239 | 1.38e-29 | 112 |
| MS.gene33809.t1 | AT1G28290 | 45.926 | 135 | 64 | 3 | 163 | 290 | 183 | 315 | 3.00e-29 | 113 |
| MS.gene33809.t1 | AT1G28290 | 45.926 | 135 | 64 | 3 | 163 | 290 | 227 | 359 | 4.57e-29 | 114 |
Find 124 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGGTGTTGATACTCTTT+TGG | 0.212871 | 4.4:+24070602 | MS.gene33809:CDS |
| TTGTGTGAGGAGGGTAAGTT+GGG | 0.250591 | 4.4:-24070149 | None:intergenic |
| GCATAGCTTGTGATGTTCTT+TGG | 0.271925 | 4.4:-24072182 | None:intergenic |
| AACCTTCATGGTGGTCTTAC+CGG | 0.294151 | 4.4:+24072260 | MS.gene33809:CDS |
| TGAACAGCTATAAAGCTTCT+AGG | 0.305603 | 4.4:-24070549 | None:intergenic |
| TTGGGAGCTACTCAAATTCT+TGG | 0.313293 | 4.4:+24070621 | MS.gene33809:CDS |
| TTGGAACAGGAGGGTGTAAT+GGG | 0.327634 | 4.4:-24070467 | None:intergenic |
| GTTGTGTGAGGAGGGTAAGT+TGG | 0.333157 | 4.4:-24070150 | None:intergenic |
| AACCGTTCTTATCAGTGGTC+TGG | 0.337205 | 4.4:-24072142 | None:intergenic |
| GGGTGTAGAGGGGTGTGAAT+AGG | 0.348091 | 4.4:-24070285 | None:intergenic |
| AGGGGTGTAGGATGCAATGG+TGG | 0.362731 | 4.4:-24070525 | None:intergenic |
| CTTAGCCACAAACGGCTTCT+CGG | 0.373734 | 4.4:-24072297 | None:intergenic |
| CGAGAAGCCGTTTGTGGCTA+AGG | 0.379375 | 4.4:+24072298 | MS.gene33809:CDS |
| GGTGGGTGTGCTGGAGCAGG+TGG | 0.379735 | 4.4:-24070507 | None:intergenic |
| GGGTGTAGTGGTGGATGTGC+TGG | 0.382371 | 4.4:-24070411 | None:intergenic |
| GGTGGTGGTGATGGTGGTGA+GGG | 0.385537 | 4.4:-24070227 | None:intergenic |
| TCCAACCGTGTAGAGAATAA+AGG | 0.386366 | 4.4:-24072327 | None:intergenic |
| GGAGCAACAGGTGTGTGGAC+TGG | 0.395530 | 4.4:-24070390 | None:intergenic |
| TTAAAGCCTTCGAACCTTCA+TGG | 0.396084 | 4.4:+24072248 | MS.gene33809:CDS |
| GAGCAACAGGTGTGTGGACT+GGG | 0.397889 | 4.4:-24070389 | None:intergenic |
| CCCTTTATTCTCTACACGGT+TGG | 0.398136 | 4.4:+24072326 | MS.gene33809:CDS |
| AGTGAATGTGGTGGTGGTGA+TGG | 0.399069 | 4.4:-24070236 | None:intergenic |
| TGGTGGTGGTGATGGTGGTG+AGG | 0.400493 | 4.4:-24070228 | None:intergenic |
| GTTGGTGGGTGAAGTGGAGC+TGG | 0.401765 | 4.4:-24070174 | None:intergenic |
| CAGGGGTTGGTGAGTGAATG+TGG | 0.410018 | 4.4:-24070248 | None:intergenic |
| GTCTTACCGGTGCTGGTCTT+AGG | 0.411218 | 4.4:+24072273 | MS.gene33809:CDS |
| GCGTTAGCCGGTGGGTGAAC+CGG | 0.414913 | 4.4:-24070204 | None:intergenic |
| GAGCAGGAGGGTGAGGATGA+TGG | 0.417914 | 4.4:-24070362 | None:intergenic |
| ACCGTTCTTATCAGTGGTCT+GGG | 0.419238 | 4.4:-24072141 | None:intergenic |
| GGTGAGGATGATGGTGGTGG+TGG | 0.424562 | 4.4:-24070353 | None:intergenic |
| TTCGAAGGCTTTAATCCATT+CGG | 0.425021 | 4.4:-24072239 | None:intergenic |
| GTTGGAACAGGAGGGTGTAA+TGG | 0.425934 | 4.4:-24070468 | None:intergenic |
| CATGGTGGTCTTACCGGTGC+TGG | 0.430807 | 4.4:+24072266 | MS.gene33809:CDS |
| TGGTGGTGAGGGGCGTTAGC+CGG | 0.434825 | 4.4:-24070216 | None:intergenic |
| CCGTGAGTTGGTGGTTTAGC+AGG | 0.434974 | 4.4:-24070330 | None:intergenic |
| GTGTGGACTGGGGAAGGAGC+AGG | 0.436294 | 4.4:-24070378 | None:intergenic |
| TTGGTGAGTGAATGTGGTGG+TGG | 0.439920 | 4.4:-24070242 | None:intergenic |
| TTAGCCACAAACGGCTTCTC+GGG | 0.442517 | 4.4:-24072296 | None:intergenic |
| AATGGTGGGTGTGCTGGAGC+AGG | 0.443203 | 4.4:-24070510 | None:intergenic |
| GAGGGTGAGGATGATGGTGG+TGG | 0.446074 | 4.4:-24070356 | None:intergenic |
| GGATGCAATGGTGGGTGTGC+TGG | 0.446386 | 4.4:-24070516 | None:intergenic |
| TAGGAGAAGGAGTAGGAGCA+GGG | 0.447008 | 4.4:-24070266 | None:intergenic |
| ATAGGAGAAGGAGTAGGAGC+AGG | 0.447520 | 4.4:-24070267 | None:intergenic |
| AGAAGCTTTATAGCTGTTCA+AGG | 0.449540 | 4.4:+24070552 | MS.gene33809:CDS |
| GCTGGAGCAGGTGGGTGTAA+TGG | 0.449877 | 4.4:-24070498 | None:intergenic |
| GGGGAAGGAGCAGGAGGGTG+AGG | 0.451502 | 4.4:-24070369 | None:intergenic |
| GTGTGAACAGGTGGGTGTAG+TGG | 0.456043 | 4.4:-24070423 | None:intergenic |
| GGTGGATGTGCTGGAGCAAC+AGG | 0.458900 | 4.4:-24070402 | None:intergenic |
| TGAACAGGTGGGTGTAGTGG+TGG | 0.461198 | 4.4:-24070420 | None:intergenic |
| AATGGAGGGTGAGTTGGAAC+AGG | 0.461672 | 4.4:-24070480 | None:intergenic |
| GGAGCAGGTGGGTGTAATGG+AGG | 0.467004 | 4.4:-24070495 | None:intergenic |
| GGGTGTAATGGAGGGTGAGT+TGG | 0.472310 | 4.4:-24070486 | None:intergenic |
| CCAACCGTGTAGAGAATAAA+GGG | 0.474781 | 4.4:-24072326 | None:intergenic |
| AATGGTAAGGAGGGTGTAGA+GGG | 0.479744 | 4.4:-24070296 | None:intergenic |
| GGAACAACAGGGGTGTGAAC+AGG | 0.484015 | 4.4:-24070435 | None:intergenic |
| TAGGCCCGAGAAGCCGTTTG+TGG | 0.488242 | 4.4:+24072292 | MS.gene33809:CDS |
| GTTGGTGGTTTAGCAGGTAC+AGG | 0.492827 | 4.4:-24070324 | None:intergenic |
| TGGTGGTGGCCGTGAGTTGG+TGG | 0.495728 | 4.4:-24070339 | None:intergenic |
| GGGGTGTAGGATGCAATGGT+GGG | 0.495833 | 4.4:-24070524 | None:intergenic |
| TGAACCGGTGACTTGGTTGG+TGG | 0.499429 | 4.4:-24070189 | None:intergenic |
| GGTGAGGGGCGTTAGCCGGT+GGG | 0.507227 | 4.4:-24070212 | None:intergenic |
| GAATGTGGTGGTGGTGATGG+TGG | 0.512130 | 4.4:-24070233 | None:intergenic |
| GAAGGAGTAGGAGCAGGGGT+TGG | 0.512859 | 4.4:-24070261 | None:intergenic |
| TGGACTGGGGAAGGAGCAGG+AGG | 0.517336 | 4.4:-24070375 | None:intergenic |
| GAATGGTAAGGAGGGTGTAG+AGG | 0.518563 | 4.4:-24070297 | None:intergenic |
| GAACAGCTATAAAGCTTCTA+GGG | 0.519875 | 4.4:-24070548 | None:intergenic |
| GTAAAAGTAGCAATATTGCA+AGG | 0.527067 | 4.4:-24070077 | None:intergenic |
| GACTTGGTTGGTGGGTGAAG+TGG | 0.529058 | 4.4:-24070180 | None:intergenic |
| GAACCGGTGACTTGGTTGGT+GGG | 0.532249 | 4.4:-24070188 | None:intergenic |
| TGGTGGTGGTGGCCGTGAGT+TGG | 0.535050 | 4.4:-24070342 | None:intergenic |
| GGAAGACCCTTAGCCACAAA+CGG | 0.535213 | 4.4:-24072305 | None:intergenic |
| GTGGGTGTGCTGGAGCAGGT+GGG | 0.537085 | 4.4:-24070506 | None:intergenic |
| TGGTGAGGGGCGTTAGCCGG+TGG | 0.537298 | 4.4:-24070213 | None:intergenic |
| AGAGGGGTGTGAATAGGAGA+AGG | 0.538140 | 4.4:-24070279 | None:intergenic |
| ACAACAGGGGTGTGAACAGG+TGG | 0.540027 | 4.4:-24070432 | None:intergenic |
| AAGCTTCTAGGGAGGGGTGT+AGG | 0.543464 | 4.4:-24070537 | None:intergenic |
| GGGTGAACCGGTGACTTGGT+TGG | 0.547932 | 4.4:-24070192 | None:intergenic |
| ACAGGTGTAGAATGGTAAGG+AGG | 0.548661 | 4.4:-24070306 | None:intergenic |
| GTGGTGGTGATGGTGGTGAG+GGG | 0.548870 | 4.4:-24070226 | None:intergenic |
| GAGGGTGAGTTGGAACAGGA+GGG | 0.549639 | 4.4:-24070476 | None:intergenic |
| ACAGGTGTGTGGACTGGGGA+AGG | 0.551806 | 4.4:-24070384 | None:intergenic |
| AGGAGAAGGAGTAGGAGCAG+GGG | 0.557814 | 4.4:-24070265 | None:intergenic |
| GAGCTGGTGTTGTGTGAGGA+GGG | 0.558920 | 4.4:-24070158 | None:intergenic |
| GTCAAATCTTGCAAGTATGC+TGG | 0.559072 | 4.4:+24070585 | MS.gene33809:CDS |
| GGAGGGTGAGTTGGAACAGG+AGG | 0.559242 | 4.4:-24070477 | None:intergenic |
| CGGTGGGTGAACCGGTGACT+TGG | 0.560182 | 4.4:-24070196 | None:intergenic |
| GGAACAGGAGGGTGTAATGG+GGG | 0.562210 | 4.4:-24070465 | None:intergenic |
| GCTATAAAGCTTCTAGGGAG+GGG | 0.564039 | 4.4:-24070543 | None:intergenic |
| CAAGTCACCGGTTCACCCAC+CGG | 0.566063 | 4.4:+24070197 | MS.gene33809:CDS |
| TGGAACAGGAGGGTGTAATG+GGG | 0.566240 | 4.4:-24070466 | None:intergenic |
| CTCGGGCCTAAGACCAGCAC+CGG | 0.566604 | 4.4:-24072279 | None:intergenic |
| GAGAAGCCGTTTGTGGCTAA+GGG | 0.568492 | 4.4:+24072299 | MS.gene33809:CDS |
| CAGGAGGGTGAGGATGATGG+TGG | 0.571819 | 4.4:-24070359 | None:intergenic |
| AGCTATAAAGCTTCTAGGGA+GGG | 0.575095 | 4.4:-24070544 | None:intergenic |
| TAGCAGGTACAGGTGTAGAA+TGG | 0.575670 | 4.4:-24070314 | None:intergenic |
| GGGAGGGGTGTAGGATGCAA+TGG | 0.575724 | 4.4:-24070528 | None:intergenic |
| AAAATAACCGTTCTTATCAG+TGG | 0.576999 | 4.4:-24072147 | None:intergenic |
| GGTACAGGTGTAGAATGGTA+AGG | 0.578784 | 4.4:-24070309 | None:intergenic |
| TCACCCACCAACCAAGTCAC+CGG | 0.586790 | 4.4:+24070185 | MS.gene33809:CDS |
| CAGGTGTAGAATGGTAAGGA+GGG | 0.586995 | 4.4:-24070305 | None:intergenic |
| GGAGCTGGTGTTGTGTGAGG+AGG | 0.590088 | 4.4:-24070159 | None:intergenic |
| TAAAAGTAGCAATATTGCAA+GGG | 0.590364 | 4.4:-24070076 | None:intergenic |
| AGTGGAGCTGGTGTTGTGTG+AGG | 0.593333 | 4.4:-24070162 | None:intergenic |
| GTGTGAATAGGAGAAGGAGT+AGG | 0.597611 | 4.4:-24070273 | None:intergenic |
| GGGGATGAGTTGGAACAACA+GGG | 0.598634 | 4.4:-24070446 | None:intergenic |
| GAGCAGGTGGGTGTAATGGA+GGG | 0.598759 | 4.4:-24070494 | None:intergenic |
| TCTTCCCTTTATTCTCTACA+CGG | 0.602477 | 4.4:+24072322 | MS.gene33809:CDS |
| CACCGGTAAGACCACCATGA+AGG | 0.605543 | 4.4:-24072262 | None:intergenic |
| CAACAACACAAAGTACAAGT+TGG | 0.607796 | 4.4:+24072109 | MS.gene33809:CDS |
| ATGGTAAGGAGGGTGTAGAG+GGG | 0.618924 | 4.4:-24070295 | None:intergenic |
| AGACCACCATGAAGGTTCGA+AGG | 0.625392 | 4.4:-24072254 | None:intergenic |
| GTGCTGGAGCAACAGGTGTG+TGG | 0.635755 | 4.4:-24070395 | None:intergenic |
| CAGCTATAAAGCTTCTAGGG+AGG | 0.636143 | 4.4:-24070545 | None:intergenic |
| CAACAGGGGTGTGAACAGGT+GGG | 0.648196 | 4.4:-24070431 | None:intergenic |
| GGGTTGGTGAGTGAATGTGG+TGG | 0.650934 | 4.4:-24070245 | None:intergenic |
| ACCCAGACCACTGATAAGAA+CGG | 0.652681 | 4.4:+24072140 | MS.gene33809:CDS |
| CCTGCTAAACCACCAACTCA+CGG | 0.657475 | 4.4:+24070330 | MS.gene33809:CDS |
| CATTTAGGCTCAAATGCAAG+AGG | 0.660159 | 4.4:-24072350 | None:intergenic |
| GGACTGGGGAAGGAGCAGGA+GGG | 0.674543 | 4.4:-24070374 | None:intergenic |
| GTTGCATTGAAGCTTCACAA+CGG | 0.689892 | 4.4:-24072090 | None:intergenic |
| AGCAACAGGTGTGTGGACTG+GGG | 0.697477 | 4.4:-24070388 | None:intergenic |
| GGGATGAGTTGGAACAACAG+GGG | 0.726853 | 4.4:-24070445 | None:intergenic |
| AAGCCTTCGAACCTTCATGG+TGG | 0.750456 | 4.4:+24072251 | MS.gene33809:CDS |
| TGTGTGAGGAGGGTAAGTTG+GGG | 0.787508 | 4.4:-24070148 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATAGAGTATATTTTA+AGG | + | chr4.4:24071725-24071744 | MS.gene33809:intron | 10.0% |
| !!! | TTTTCTTGAAATTATTTTTT+AGG | + | chr4.4:24071340-24071359 | MS.gene33809:intron | 10.0% |
| !! | ATTAGATGAACAAAAAAAAT+GGG | - | chr4.4:24071053-24071072 | None:intergenic | 15.0% |
| !! | TATTAGATGAACAAAAAAAA+TGG | - | chr4.4:24071054-24071073 | None:intergenic | 15.0% |
| !! | TTTCAAAATACATAAAATGA+TGG | - | chr4.4:24072056-24072075 | None:intergenic | 15.0% |
| !!! | ATAATAGTACATTATTTTGT+TGG | + | chr4.4:24071973-24071992 | MS.gene33809:intron | 15.0% |
| !!! | CTATGAAAAATTTCTAATTT+TGG | - | chr4.4:24071465-24071484 | None:intergenic | 15.0% |
| !!! | TAAGTACATTAATTACTTTT+AGG | - | chr4.4:24071605-24071624 | None:intergenic | 15.0% |
| !!! | TAATAGTACATTATTTTGTT+GGG | + | chr4.4:24071974-24071993 | MS.gene33809:intron | 15.0% |
| !! | TAATCATTGTTTGCAATTAA+GGG | + | chr4.4:24071831-24071850 | MS.gene33809:intron | 20.0% |
| !! | TCCAAAGTTTAGAAAAATAT+TGG | + | chr4.4:24071144-24071163 | MS.gene33809:intron | 20.0% |
| !! | TTAATCATTGTTTGCAATTA+AGG | + | chr4.4:24071830-24071849 | MS.gene33809:intron | 20.0% |
| !! | TTGAATTGAACTATGAATAT+TGG | + | chr4.4:24070859-24070878 | MS.gene33809:intron | 20.0% |
| !!! | AAAGTGAGTATTTTTCTATT+CGG | - | chr4.4:24071685-24071704 | None:intergenic | 20.0% |
| !!! | ACCAATATTTTTCTAAACTT+TGG | - | chr4.4:24071148-24071167 | None:intergenic | 20.0% |
| !!! | AGAAAAACTTTTGCATAAAA+TGG | - | chr4.4:24071326-24071345 | None:intergenic | 20.0% |
| !!! | GTATTTTGAAATTGAATTGT+AGG | + | chr4.4:24072065-24072084 | MS.gene33809:intron | 20.0% |
| !!! | TTTTATTTCTTTACCATTCT+TGG | - | chr4.4:24071901-24071920 | None:intergenic | 20.0% |
| ! | AACAATGATTAAAGTTTCTC+CGG | - | chr4.4:24071822-24071841 | None:intergenic | 25.0% |
| ! | AACTTTGGATTTGTAAACTT+TGG | - | chr4.4:24071133-24071152 | None:intergenic | 25.0% |
| ! | ACTTTGGATTTGTAAACTTT+GGG | - | chr4.4:24071132-24071151 | None:intergenic | 25.0% |
| ! | ATCACAGATAAACCTAAAAA+GGG | - | chr4.4:24070992-24071011 | None:intergenic | 25.0% |
| ! | CTAAAAAGGGAATAATTGTT+AGG | - | chr4.4:24070979-24070998 | None:intergenic | 25.0% |
| ! | TAAAAGTAGCAATATTGCAA+GGG | - | chr4.4:24070079-24070098 | None:intergenic | 25.0% |
| !! | CTAACAATTATTCCCTTTTT+AGG | + | chr4.4:24070977-24070996 | MS.gene33809:intron | 25.0% |
| !!! | AACGGTTATTTTTTCATTGA+AGG | + | chr4.4:24072158-24072177 | MS.gene33809:CDS | 25.0% |
| AAAATAACCGTTCTTATCAG+TGG | - | chr4.4:24072150-24072169 | None:intergenic | 30.0% | |
| AATATCTCTAGATCGTAGTA+CGG | + | chr4.4:24071636-24071655 | MS.gene33809:intron | 30.0% | |
| ACAATGATTAAAGTTTCTCC+GGG | - | chr4.4:24071821-24071840 | None:intergenic | 30.0% | |
| ACTGCTACAGTATAAAAGTA+AGG | + | chr4.4:24071391-24071410 | MS.gene33809:intron | 30.0% | |
| AGCAGTACTACGTTAAAATA+TGG | - | chr4.4:24071377-24071396 | None:intergenic | 30.0% | |
| AGTACTACGTTAAAATATGG+AGG | - | chr4.4:24071374-24071393 | None:intergenic | 30.0% | |
| CATCACAGATAAACCTAAAA+AGG | - | chr4.4:24070993-24071012 | None:intergenic | 30.0% | |
| CGTTGTCATATCAATGTAAA+AGG | - | chr4.4:24072001-24072020 | None:intergenic | 30.0% | |
| CTGCTACAGTATAAAAGTAA+GGG | + | chr4.4:24071392-24071411 | MS.gene33809:intron | 30.0% | |
| GTAAAAGTAGCAATATTGCA+AGG | - | chr4.4:24070080-24070099 | None:intergenic | 30.0% | |
| TCATAGTTCAATTCAAACAG+TGG | - | chr4.4:24070855-24070874 | None:intergenic | 30.0% | |
| TTAGGTTTATCTGTGATGTT+GGG | + | chr4.4:24070995-24071014 | MS.gene33809:intron | 30.0% | |
| ! | TTTAGGTTTATCTGTGATGT+TGG | + | chr4.4:24070994-24071013 | MS.gene33809:intron | 30.0% |
| AATGTTAACATGTGCCCTAA+GGG | - | chr4.4:24071580-24071599 | None:intergenic | 35.0% | |
| CAACAACACAAAGTACAAGT+TGG | + | chr4.4:24072109-24072128 | MS.gene33809:CDS | 35.0% | |
| CAATGATTAAAGTTTCTCCG+GGG | - | chr4.4:24071820-24071839 | None:intergenic | 35.0% | |
| CCATTAATCTCGTAGATCTA+CGG | - | chr4.4:24070937-24070956 | None:intergenic | 35.0% | |
| CGTAAAAAAGTTATGTTCCC+CGG | + | chr4.4:24071800-24071819 | MS.gene33809:intron | 35.0% | |
| CTAAAACGACAAAGTAGCTT+TGG | - | chr4.4:24071934-24071953 | None:intergenic | 35.0% | |
| GAACAGCTATAAAGCTTCTA+GGG | - | chr4.4:24070551-24070570 | None:intergenic | 35.0% | |
| TAGGTTTATCTGTGATGTTG+GGG | + | chr4.4:24070996-24071015 | MS.gene33809:intron | 35.0% | |
| TCTTCCCTTTATTCTCTACA+CGG | + | chr4.4:24072322-24072341 | MS.gene33809:CDS | 35.0% | |
| TGAACAGCTATAAAGCTTCT+AGG | - | chr4.4:24070552-24070571 | None:intergenic | 35.0% | |
| ! | AGAAGCTTTATAGCTGTTCA+AGG | + | chr4.4:24070552-24070571 | MS.gene33809:CDS | 35.0% |
| ! | GTGTTAAGTACTGTTAAGAG+AGG | + | chr4.4:24071870-24071889 | MS.gene33809:intron | 35.0% |
| ! | TTCGAAGGCTTTAATCCATT+CGG | - | chr4.4:24072242-24072261 | None:intergenic | 35.0% |
| !! | AAAATGTTAACTTGTGCCCT+TGG | + | chr4.4:24071192-24071211 | MS.gene33809:intron | 35.0% |
| !! | AAATGTTAACTTGTGCCCTT+GGG | + | chr4.4:24071193-24071212 | MS.gene33809:intron | 35.0% |
| !! | AGTGTCGTTTAGCAACAAAA+AGG | - | chr4.4:24072031-24072050 | None:intergenic | 35.0% |
| AAGAGAGGAGAATCCAAGAA+TGG | + | chr4.4:24071885-24071904 | MS.gene33809:intron | 40.0% | |
| AGGTTTATCTGTGATGTTGG+GGG | + | chr4.4:24070997-24071016 | MS.gene33809:intron | 40.0% | |
| ATCGTAGTACGGTAGTACTT+TGG | + | chr4.4:24071647-24071666 | MS.gene33809:intron | 40.0% | |
| ATTCCCTAACATATGCCCTT+AGG | + | chr4.4:24071562-24071581 | MS.gene33809:intron | 40.0% | |
| CAATGTTAACATGTGCCCTA+AGG | - | chr4.4:24071581-24071600 | None:intergenic | 40.0% | |
| CATTTAGGCTCAAATGCAAG+AGG | - | chr4.4:24072353-24072372 | None:intergenic | 40.0% | |
| CCAACCGTGTAGAGAATAAA+GGG | - | chr4.4:24072329-24072348 | None:intergenic | 40.0% | |
| CCGTAGATCTACGAGATTAA+TGG | + | chr4.4:24070934-24070953 | MS.gene33809:intron | 40.0% | |
| CTTAGGGCACATGTTAACAT+TGG | + | chr4.4:24071579-24071598 | MS.gene33809:intron | 40.0% | |
| CTTCTTAACTTATGCCCCAA+GGG | - | chr4.4:24071211-24071230 | None:intergenic | 40.0% | |
| GTCAAATCTTGCAAGTATGC+TGG | + | chr4.4:24070585-24070604 | MS.gene33809:CDS | 40.0% | |
| GTTGCATTGAAGCTTCACAA+CGG | - | chr4.4:24072093-24072112 | None:intergenic | 40.0% | |
| TCCAACCGTGTAGAGAATAA+AGG | - | chr4.4:24072330-24072349 | None:intergenic | 40.0% | |
| TCGTAGTACGGTAGTACTTT+GGG | + | chr4.4:24071648-24071667 | MS.gene33809:intron | 40.0% | |
| TCTTCTTAACTTATGCCCCA+AGG | - | chr4.4:24071212-24071231 | None:intergenic | 40.0% | |
| TTAAAGCCTTCGAACCTTCA+TGG | + | chr4.4:24072248-24072267 | MS.gene33809:CDS | 40.0% | |
| TTCCCTAACATATGCCCTTA+GGG | + | chr4.4:24071563-24071582 | MS.gene33809:intron | 40.0% | |
| TTGCAATTAAGGGAACAGTG+TGG | + | chr4.4:24071841-24071860 | MS.gene33809:intron | 40.0% | |
| TTGGGAGCTACTCAAATTCT+TGG | + | chr4.4:24070621-24070640 | MS.gene33809:CDS | 40.0% | |
| ! | AGCTATAAAGCTTCTAGGGA+GGG | - | chr4.4:24070547-24070566 | None:intergenic | 40.0% |
| ! | GCATAGCTTGTGATGTTCTT+TGG | - | chr4.4:24072185-24072204 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTTG+GGG | + | chr4.4:24071194-24071213 | MS.gene33809:intron | 40.0% |
| !! | ATTCCTTAACTTGTGCCCTA+AGG | - | chr4.4:24071442-24071461 | None:intergenic | 40.0% |
| !! | TTCCTTAACTTGTGCCCTAA+GGG | - | chr4.4:24071441-24071460 | None:intergenic | 40.0% |
| !!! | GCTGGTGTTGATACTCTTTT+GGG | + | chr4.4:24070603-24070622 | MS.gene33809:CDS | 40.0% |
| !!! | TATCAGTGGTCTGGGTTTTT+TGG | - | chr4.4:24072136-24072155 | None:intergenic | 40.0% |
| !!! | TGCTGGTGTTGATACTCTTT+TGG | + | chr4.4:24070602-24070621 | MS.gene33809:CDS | 40.0% |
| AACCGTTCTTATCAGTGGTC+TGG | - | chr4.4:24072145-24072164 | None:intergenic | 45.0% | |
| ACAGGTGTAGAATGGTAAGG+AGG | - | chr4.4:24070309-24070328 | None:intergenic | 45.0% | |
| ACCCAGACCACTGATAAGAA+CGG | + | chr4.4:24072140-24072159 | MS.gene33809:CDS | 45.0% | |
| ACCGTTCTTATCAGTGGTCT+GGG | - | chr4.4:24072144-24072163 | None:intergenic | 45.0% | |
| AGTACGGTAGTACTTTGGGT+AGG | + | chr4.4:24071652-24071671 | MS.gene33809:intron | 45.0% | |
| CAGGTGTAGAATGGTAAGGA+GGG | - | chr4.4:24070308-24070327 | None:intergenic | 45.0% | |
| CCCTTTATTCTCTACACGGT+TGG | + | chr4.4:24072326-24072345 | MS.gene33809:CDS | 45.0% | |
| GGTACAGGTGTAGAATGGTA+AGG | - | chr4.4:24070312-24070331 | None:intergenic | 45.0% | |
| GTACGGTAGTACTTTGGGTA+GGG | + | chr4.4:24071653-24071672 | MS.gene33809:intron | 45.0% | |
| GTGTGAATAGGAGAAGGAGT+AGG | - | chr4.4:24070276-24070295 | None:intergenic | 45.0% | |
| TACGGTAGTACTTTGGGTAG+GGG | + | chr4.4:24071654-24071673 | MS.gene33809:intron | 45.0% | |
| TAGCAGGTACAGGTGTAGAA+TGG | - | chr4.4:24070317-24070336 | None:intergenic | 45.0% | |
| TTGTGTGAGGAGGGTAAGTT+GGG | - | chr4.4:24070152-24070171 | None:intergenic | 45.0% | |
| ! | AACCTTCATGGTGGTCTTAC+CGG | + | chr4.4:24072260-24072279 | MS.gene33809:CDS | 45.0% |
| ! | AATGGTAAGGAGGGTGTAGA+GGG | - | chr4.4:24070299-24070318 | None:intergenic | 45.0% |
| ! | CAGCTATAAAGCTTCTAGGG+AGG | - | chr4.4:24070548-24070567 | None:intergenic | 45.0% |
| ! | GCTATAAAGCTTCTAGGGAG+GGG | - | chr4.4:24070546-24070565 | None:intergenic | 45.0% |
| ! | TGCCCTAAGGGCATATGTTA+GGG | - | chr4.4:24071568-24071587 | None:intergenic | 45.0% |
| ! | TTGGAACAGGAGGGTGTAAT+GGG | - | chr4.4:24070470-24070489 | None:intergenic | 45.0% |
| !! | GTTTTAGTCAGTGCACCGAA+TGG | + | chr4.4:24072224-24072243 | MS.gene33809:CDS | 45.0% |
| !!! | TAATGTTTTTATTTTTATAA+AGG | + | chr4.4:24071169-24071188 | MS.gene33809:intron | 5.0% |
| AAGCCTTCGAACCTTCATGG+TGG | + | chr4.4:24072251-24072270 | MS.gene33809:CDS | 50.0% | |
| AGACCACCATGAAGGTTCGA+AGG | - | chr4.4:24072257-24072276 | None:intergenic | 50.0% | |
| ATAGGAGAAGGAGTAGGAGC+AGG | - | chr4.4:24070270-24070289 | None:intergenic | 50.0% | |
| CCTGCTAAACCACCAACTCA+CGG | + | chr4.4:24070330-24070349 | MS.gene33809:CDS | 50.0% | |
| CTTAGCCACAAACGGCTTCT+CGG | - | chr4.4:24072300-24072319 | None:intergenic | 50.0% | |
| GAGAAGCCGTTTGTGGCTAA+GGG | + | chr4.4:24072299-24072318 | MS.gene33809:CDS | 50.0% | |
| GGAAGACCCTTAGCCACAAA+CGG | - | chr4.4:24072308-24072327 | None:intergenic | 50.0% | |
| GTTGTGTGAGGAGGGTAAGT+TGG | - | chr4.4:24070153-24070172 | None:intergenic | 50.0% | |
| TAGGAGAAGGAGTAGGAGCA+GGG | - | chr4.4:24070269-24070288 | None:intergenic | 50.0% | |
| TGCCCTTAGGGCACAAGTTA+AGG | + | chr4.4:24071436-24071455 | MS.gene33809:intron | 50.0% | |
| TGTGTGAGGAGGGTAAGTTG+GGG | - | chr4.4:24070151-24070170 | None:intergenic | 50.0% | |
| TTAGCCACAAACGGCTTCTC+GGG | - | chr4.4:24072299-24072318 | None:intergenic | 50.0% | |
| TTGGTGAGTGAATGTGGTGG+TGG | - | chr4.4:24070245-24070264 | None:intergenic | 50.0% | |
| ! | AATGGAGGGTGAGTTGGAAC+AGG | - | chr4.4:24070483-24070502 | None:intergenic | 50.0% |
| ! | AGAGGGGTGTGAATAGGAGA+AGG | - | chr4.4:24070282-24070301 | None:intergenic | 50.0% |
| ! | ATGGTAAGGAGGGTGTAGAG+GGG | - | chr4.4:24070298-24070317 | None:intergenic | 50.0% |
| ! | GAATGGTAAGGAGGGTGTAG+AGG | - | chr4.4:24070300-24070319 | None:intergenic | 50.0% |
| ! | GGGATGAGTTGGAACAACAG+GGG | - | chr4.4:24070448-24070467 | None:intergenic | 50.0% |
| ! | GGGGATGAGTTGGAACAACA+GGG | - | chr4.4:24070449-24070468 | None:intergenic | 50.0% |
| ! | GTGCCCTAAGGGCATATGTT+AGG | - | chr4.4:24071569-24071588 | None:intergenic | 50.0% |
| ! | GTTGGAACAGGAGGGTGTAA+TGG | - | chr4.4:24070471-24070490 | None:intergenic | 50.0% |
| ! | TGGAACAGGAGGGTGTAATG+GGG | - | chr4.4:24070469-24070488 | None:intergenic | 50.0% |
| !! | AGTGAATGTGGTGGTGGTGA+TGG | - | chr4.4:24070239-24070258 | None:intergenic | 50.0% |
| !! | GTGATGTTGGGGGTACTCTT+GGG | + | chr4.4:24071007-24071026 | MS.gene33809:intron | 50.0% |
| !! | GTTGGTGGTTTAGCAGGTAC+AGG | - | chr4.4:24070327-24070346 | None:intergenic | 50.0% |
| !! | TGTGATGTTGGGGGTACTCT+TGG | + | chr4.4:24071006-24071025 | MS.gene33809:intron | 50.0% |
| AGGAGAAGGAGTAGGAGCAG+GGG | - | chr4.4:24070268-24070287 | None:intergenic | 55.0% | |
| CACCGGTAAGACCACCATGA+AGG | - | chr4.4:24072265-24072284 | None:intergenic | 55.0% | |
| CGAGAAGCCGTTTGTGGCTA+AGG | + | chr4.4:24072298-24072317 | MS.gene33809:CDS | 55.0% | |
| CTTGTGCCCTTGTGCCCTTA+GGG | + | chr4.4:24071424-24071443 | MS.gene33809:intron | 55.0% | |
| GAGCAACAGGTGTGTGGACT+GGG | - | chr4.4:24070392-24070411 | None:intergenic | 55.0% | |
| GGGGTGTAGGATGCAATGGT+GGG | - | chr4.4:24070527-24070546 | None:intergenic | 55.0% | |
| GTGTGAACAGGTGGGTGTAG+TGG | - | chr4.4:24070426-24070445 | None:intergenic | 55.0% | |
| TCACCCACCAACCAAGTCAC+CGG | + | chr4.4:24070185-24070204 | MS.gene33809:CDS | 55.0% | |
| TCTTGTGCCCTTGTGCCCTT+AGG | + | chr4.4:24071423-24071442 | MS.gene33809:intron | 55.0% | |
| TGAACAGGTGGGTGTAGTGG+TGG | - | chr4.4:24070423-24070442 | None:intergenic | 55.0% | |
| ! | AAGCTTCTAGGGAGGGGTGT+AGG | - | chr4.4:24070540-24070559 | None:intergenic | 55.0% |
| ! | ACAACAGGGGTGTGAACAGG+TGG | - | chr4.4:24070435-24070454 | None:intergenic | 55.0% |
| ! | ACTTGTGCCCTAAGGGCACA+AGG | - | chr4.4:24071434-24071453 | None:intergenic | 55.0% |
| ! | AGCAACAGGTGTGTGGACTG+GGG | - | chr4.4:24070391-24070410 | None:intergenic | 55.0% |
| ! | AGGGGTGTAGGATGCAATGG+TGG | - | chr4.4:24070528-24070547 | None:intergenic | 55.0% |
| ! | CAACAGGGGTGTGAACAGGT+GGG | - | chr4.4:24070434-24070453 | None:intergenic | 55.0% |
| ! | CTTGTGCCCTAAGGGCACAA+GGG | - | chr4.4:24071433-24071452 | None:intergenic | 55.0% |
| ! | GAGCAGGTGGGTGTAATGGA+GGG | - | chr4.4:24070497-24070516 | None:intergenic | 55.0% |
| ! | GAGGGTGAGTTGGAACAGGA+GGG | - | chr4.4:24070479-24070498 | None:intergenic | 55.0% |
| ! | GGAACAACAGGGGTGTGAAC+AGG | - | chr4.4:24070438-24070457 | None:intergenic | 55.0% |
| ! | GGAACAGGAGGGTGTAATGG+GGG | - | chr4.4:24070468-24070487 | None:intergenic | 55.0% |
| ! | GGGGGATGAGTTGGAACAAC+AGG | - | chr4.4:24070450-24070469 | None:intergenic | 55.0% |
| ! | GGGTGTAATGGAGGGTGAGT+TGG | - | chr4.4:24070489-24070508 | None:intergenic | 55.0% |
| ! | GGGTGTAATGGGGGATGAGT+TGG | - | chr4.4:24070459-24070478 | None:intergenic | 55.0% |
| ! | GGGTGTAGAGGGGTGTGAAT+AGG | - | chr4.4:24070288-24070307 | None:intergenic | 55.0% |
| !! | AGTGGAGCTGGTGTTGTGTG+AGG | - | chr4.4:24070165-24070184 | None:intergenic | 55.0% |
| !! | CAGGGGTTGGTGAGTGAATG+TGG | - | chr4.4:24070251-24070270 | None:intergenic | 55.0% |
| !! | CCGTGAGTTGGTGGTTTAGC+AGG | - | chr4.4:24070333-24070352 | None:intergenic | 55.0% |
| !! | GAACCGGTGACTTGGTTGGT+GGG | - | chr4.4:24070191-24070210 | None:intergenic | 55.0% |
| !! | GAATGTGGTGGTGGTGATGG+TGG | - | chr4.4:24070236-24070255 | None:intergenic | 55.0% |
| !! | GACTTGGTTGGTGGGTGAAG+TGG | - | chr4.4:24070183-24070202 | None:intergenic | 55.0% |
| !! | GAGCTGGTGTTGTGTGAGGA+GGG | - | chr4.4:24070161-24070180 | None:intergenic | 55.0% |
| !! | GGGTTGGTGAGTGAATGTGG+TGG | - | chr4.4:24070248-24070267 | None:intergenic | 55.0% |
| !! | GTCTTACCGGTGCTGGTCTT+AGG | + | chr4.4:24072273-24072292 | MS.gene33809:CDS | 55.0% |
| !! | TGAACCGGTGACTTGGTTGG+TGG | - | chr4.4:24070192-24070211 | None:intergenic | 55.0% |
| GAAGGAGTAGGAGCAGGGGT+TGG | - | chr4.4:24070264-24070283 | None:intergenic | 60.0% | |
| GAGCAGGAGGGTGAGGATGA+TGG | - | chr4.4:24070365-24070384 | None:intergenic | 60.0% | |
| GCTGGAGCAGGTGGGTGTAA+TGG | - | chr4.4:24070501-24070520 | None:intergenic | 60.0% | |
| GGAGCAACAGGTGTGTGGAC+TGG | - | chr4.4:24070393-24070412 | None:intergenic | 60.0% | |
| GGAGCAGGTGGGTGTAATGG+AGG | - | chr4.4:24070498-24070517 | None:intergenic | 60.0% | |
| GGTGGATGTGCTGGAGCAAC+AGG | - | chr4.4:24070405-24070424 | None:intergenic | 60.0% | |
| GTGCTGGAGCAACAGGTGTG+TGG | - | chr4.4:24070398-24070417 | None:intergenic | 60.0% | |
| TAGGCCCGAGAAGCCGTTTG+TGG | + | chr4.4:24072292-24072311 | MS.gene33809:CDS | 60.0% | |
| ! | CAGGAGGGTGAGGATGATGG+TGG | - | chr4.4:24070362-24070381 | None:intergenic | 60.0% |
| ! | CATGGTGGTCTTACCGGTGC+TGG | + | chr4.4:24072266-24072285 | MS.gene33809:CDS | 60.0% |
| ! | GGAGGGTGAGTTGGAACAGG+AGG | - | chr4.4:24070480-24070499 | None:intergenic | 60.0% |
| ! | GGGAGGGGTGTAGGATGCAA+TGG | - | chr4.4:24070531-24070550 | None:intergenic | 60.0% |
| ! | GTTGGTGGGTGAAGTGGAGC+TGG | - | chr4.4:24070177-24070196 | None:intergenic | 60.0% |
| !! | AATGGTGGGTGTGCTGGAGC+AGG | - | chr4.4:24070513-24070532 | None:intergenic | 60.0% |
| !! | ACAGGTGTGTGGACTGGGGA+AGG | - | chr4.4:24070387-24070406 | None:intergenic | 60.0% |
| !! | CAAGTCACCGGTTCACCCAC+CGG | + | chr4.4:24070197-24070216 | MS.gene33809:CDS | 60.0% |
| !! | GAGGGTGAGGATGATGGTGG+TGG | - | chr4.4:24070359-24070378 | None:intergenic | 60.0% |
| !! | GGAGCTGGTGTTGTGTGAGG+AGG | - | chr4.4:24070162-24070181 | None:intergenic | 60.0% |
| !! | GGATGCAATGGTGGGTGTGC+TGG | - | chr4.4:24070519-24070538 | None:intergenic | 60.0% |
| !! | GGGTGAACCGGTGACTTGGT+TGG | - | chr4.4:24070195-24070214 | None:intergenic | 60.0% |
| !! | GGGTGTAGTGGTGGATGTGC+TGG | - | chr4.4:24070414-24070433 | None:intergenic | 60.0% |
| !! | GGTGAGGATGATGGTGGTGG+TGG | - | chr4.4:24070356-24070375 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGATGGTGGTGA+GGG | - | chr4.4:24070230-24070249 | None:intergenic | 60.0% |
| !! | GTGGTGGTGATGGTGGTGAG+GGG | - | chr4.4:24070229-24070248 | None:intergenic | 60.0% |
| !! | TGGTGGTGGTGATGGTGGTG+AGG | - | chr4.4:24070231-24070250 | None:intergenic | 60.0% |
| CGGTGGGTGAACCGGTGACT+TGG | - | chr4.4:24070199-24070218 | None:intergenic | 65.0% | |
| CTCGGGCCTAAGACCAGCAC+CGG | - | chr4.4:24072282-24072301 | None:intergenic | 65.0% | |
| GCGTTAGCCGGTGGGTGAAC+CGG | - | chr4.4:24070207-24070226 | None:intergenic | 65.0% | |
| GGACTGGGGAAGGAGCAGGA+GGG | - | chr4.4:24070377-24070396 | None:intergenic | 65.0% | |
| GTGGGTGTGCTGGAGCAGGT+GGG | - | chr4.4:24070509-24070528 | None:intergenic | 65.0% | |
| ! | TGGACTGGGGAAGGAGCAGG+AGG | - | chr4.4:24070378-24070397 | None:intergenic | 65.0% |
| !! | GTGTGGACTGGGGAAGGAGC+AGG | - | chr4.4:24070381-24070400 | None:intergenic | 65.0% |
| !! | TGGTGGTGAGGGGCGTTAGC+CGG | - | chr4.4:24070219-24070238 | None:intergenic | 65.0% |
| !! | TGGTGGTGGCCGTGAGTTGG+TGG | - | chr4.4:24070342-24070361 | None:intergenic | 65.0% |
| !! | TGGTGGTGGTGGCCGTGAGT+TGG | - | chr4.4:24070345-24070364 | None:intergenic | 65.0% |
| GGGGAAGGAGCAGGAGGGTG+AGG | - | chr4.4:24070372-24070391 | None:intergenic | 70.0% | |
| GGTGGGTGTGCTGGAGCAGG+TGG | - | chr4.4:24070510-24070529 | None:intergenic | 70.0% | |
| !! | GGTGAGGGGCGTTAGCCGGT+GGG | - | chr4.4:24070215-24070234 | None:intergenic | 70.0% |
| !! | TGGTGAGGGGCGTTAGCCGG+TGG | - | chr4.4:24070216-24070235 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 24070066 | 24072382 | 24070066 | ID=MS.gene33809 |
| chr4.4 | mRNA | 24070066 | 24072382 | 24070066 | ID=MS.gene33809.t1;Parent=MS.gene33809 |
| chr4.4 | exon | 24070066 | 24070642 | 24070066 | ID=MS.gene33809.t1.exon1;Parent=MS.gene33809.t1 |
| chr4.4 | CDS | 24070066 | 24070642 | 24070066 | ID=cds.MS.gene33809.t1;Parent=MS.gene33809.t1 |
| chr4.4 | exon | 24072087 | 24072382 | 24072087 | ID=MS.gene33809.t1.exon2;Parent=MS.gene33809.t1 |
| chr4.4 | CDS | 24072087 | 24072382 | 24072087 | ID=cds.MS.gene33809.t1;Parent=MS.gene33809.t1 |
| Gene Sequence |
| Protein sequence |
