Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060547.t1 | KEH27596.1 | 97.8 | 232 | 5 | 0 | 1 | 232 | 14 | 245 | 4.50E-125 | 457.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060547.t1 | Q42564 | 71.6 | 236 | 61 | 1 | 1 | 230 | 39 | 274 | 3.2e-95 | 349.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060547.t1 | G7JXJ2 | 97.8 | 232 | 5 | 0 | 1 | 232 | 39 | 270 | 3.2e-125 | 457.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060547 | MS.gene060548 | 0.968491 | 9.40E-129 | -1.69E-46 |
| MS.gene060547 | MS.gene53003 | 0.802726 | 4.89E-49 | -1.69E-46 |
| MS.gene060547 | MS.gene59489 | 0.992338 | 1.07E-192 | -1.69E-46 |
| MS.gene060547 | MS.gene59491 | 0.991078 | 8.84E-186 | -1.69E-46 |
| MS.gene060547 | MS.gene59642 | 0.970618 | 6.84E-132 | -1.69E-46 |
| MS.gene060547 | MS.gene62603 | 0.850542 | 1.59E-60 | -1.69E-46 |
| MS.gene060547 | MS.gene64793 | 0.938501 | 6.06E-99 | -1.69E-46 |
| MS.gene060547 | MS.gene71460 | 0.813755 | 2.18E-51 | -1.69E-46 |
| MS.gene060547 | MS.gene84497 | 0.807538 | 4.81E-50 | -1.69E-46 |
| MS.gene060547 | MS.gene99526 | 0.823233 | 1.55E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 59 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAGGGAACTAATGAAAT+TGG | 0.251753 | 5.4:-13966068 | MS.gene060547:intron |
| TGCCTCAACTGTTGTGATCC+TGG | 0.267857 | 5.4:-13965708 | MS.gene060547:CDS |
| CATGATTTAATTACCTTGTT+TGG | 0.286806 | 5.4:+13966512 | None:intergenic |
| CAATTGGCTAAGGCAGCTTT+AGG | 0.300344 | 5.4:-13965740 | MS.gene060547:CDS |
| CACAAGAAACTCTCTGAATT+AGG | 0.339734 | 5.4:-13965791 | MS.gene060547:CDS |
| ATGTACTAGTACCTTTCTTC+CGG | 0.351786 | 5.4:+13966697 | None:intergenic |
| CCAACTATTCACTTTGTTCC+CGG | 0.389997 | 5.4:-13966716 | MS.gene060547:CDS |
| AGGTCCGCATATGAAACTTT+GGG | 0.390870 | 5.4:+13967179 | None:intergenic |
| TTATATGTATTTCAGCTAGC+TGG | 0.393811 | 5.4:-13966767 | MS.gene060547:intron |
| TAATTACCTTGTTTGGCATC+TGG | 0.400655 | 5.4:+13966519 | None:intergenic |
| TGATTCCTTATAGAACCATT+TGG | 0.401526 | 5.4:+13967394 | None:intergenic |
| GCCTCAACTGTTGTGATCCT+GGG | 0.428816 | 5.4:-13965707 | None:intergenic |
| AAAGATCGCTCTAACTTTGA+AGG | 0.430021 | 5.4:-13966214 | MS.gene060547:CDS |
| AAGGTCCGCATATGAAACTT+TGG | 0.433809 | 5.4:+13967178 | None:intergenic |
| TGTACTAGTACCTTTCTTCC+GGG | 0.435662 | 5.4:+13966698 | None:intergenic |
| TGGCAGTTATCGTTCTCAAT+TGG | 0.438208 | 5.4:-13965756 | MS.gene060547:CDS |
| CATAGAGTTCAACATATTTG+CGG | 0.439517 | 5.4:+13965987 | None:intergenic |
| TCAACATATTTGCGGAATGC+AGG | 0.460562 | 5.4:+13965995 | None:intergenic |
| TCACTTTGTTCCCGGAAGAA+AGG | 0.460671 | 5.4:-13966708 | MS.gene060547:intron |
| TATATGTATTTCAGCTAGCT+GGG | 0.463788 | 5.4:-13966766 | MS.gene060547:intron |
| GTTGTGGCTGTAGAGGTCAC+TGG | 0.475048 | 5.4:-13966743 | MS.gene060547:CDS |
| AAAACAGCTGTTGAATTATG+TGG | 0.483315 | 5.4:-13967337 | MS.gene060547:intron |
| AGCTGGGGTTGTGGCTGTAG+AGG | 0.496133 | 5.4:-13966750 | MS.gene060547:CDS |
| GCTCTAACTTTGAAGGTCAA+TGG | 0.497264 | 5.4:-13966207 | MS.gene060547:CDS |
| GGGGTCCAAATGGTTCTATA+AGG | 0.497436 | 5.4:-13967399 | MS.gene060547:CDS |
| CCGGGAACAAAGTGAATAGT+TGG | 0.498623 | 5.4:+13966716 | None:intergenic |
| GCTGAACCATGCTGCTAACA+AGG | 0.508818 | 5.4:-13967365 | MS.gene060547:CDS |
| ATTTCAGCTAGCTGGGGTTG+TGG | 0.511946 | 5.4:-13966759 | MS.gene060547:intron |
| ATTATAAAATAACCTGGTAA+AGG | 0.515916 | 5.4:+13967159 | None:intergenic |
| TTCATATGCGGACCTTTACC+AGG | 0.516618 | 5.4:-13967171 | MS.gene060547:intron |
| TCTGGAAGGCGACCTTCTTG+TGG | 0.517530 | 5.4:+13966537 | None:intergenic |
| TTGAGAAACAGAGGAAGTGA+AGG | 0.521165 | 5.4:-13967210 | MS.gene060547:intron |
| TCAAGCCCTTGTTAGCAGCA+TGG | 0.531740 | 5.4:+13967359 | None:intergenic |
| ATATGTTGAACTCTATGCTA+AGG | 0.543090 | 5.4:-13965981 | MS.gene060547:intron |
| TTGTACCAAAGTGTGGCCTC+CGG | 0.545189 | 5.4:+13966345 | None:intergenic |
| AAAGACATTGTAGCTCTCTC+CGG | 0.548124 | 5.4:-13966364 | MS.gene060547:CDS |
| CGCCTTCCAGATGCCAAACA+AGG | 0.549529 | 5.4:-13966525 | MS.gene060547:intron |
| TTATCGTTCTCAATTGGCTA+AGG | 0.549693 | 5.4:-13965750 | MS.gene060547:CDS |
| ATTTATAGGTGGCATGATGC+TGG | 0.555051 | 5.4:-13967448 | None:intergenic |
| GGCTAAGGCAGCTTTAGGAA+TGG | 0.558750 | 5.4:-13965735 | MS.gene060547:CDS |
| TACCTTGTTTGGCATCTGGA+AGG | 0.559846 | 5.4:+13966523 | None:intergenic |
| AATTAATTTGTACCAAAGTG+TGG | 0.573092 | 5.4:+13966338 | None:intergenic |
| TAAGAGTTATCAAACTTGAG+AGG | 0.573775 | 5.4:+13966175 | None:intergenic |
| TTGAGAACGATAACTGCCAC+CGG | 0.582999 | 5.4:+13965760 | None:intergenic |
| AAGAGTTATCAAACTTGAGA+GGG | 0.589980 | 5.4:+13966176 | None:intergenic |
| TCTCTCCGGAGGCCACACTT+TGG | 0.591661 | 5.4:-13966350 | MS.gene060547:intron |
| TCTGAATTAGGCTTCAATCC+CGG | 0.595170 | 5.4:-13965779 | MS.gene060547:CDS |
| GGTCCGCATATGAAACTTTG+GGG | 0.601066 | 5.4:+13967180 | None:intergenic |
| TCAACTAGAGCCTTGTCTGT+AGG | 0.607702 | 5.4:+13966022 | None:intergenic |
| ATTGAAGCTTCCTACAGACA+AGG | 0.615401 | 5.4:-13966032 | MS.gene060547:CDS |
| CTGAACCATGCTGCTAACAA+GGG | 0.615953 | 5.4:-13967364 | MS.gene060547:CDS |
| GACATTGTAGCTCTCTCCGG+AGG | 0.618468 | 5.4:-13966361 | MS.gene060547:CDS |
| TCATTGGAATCTCCACAAGA+AGG | 0.637304 | 5.4:-13966549 | MS.gene060547:CDS |
| ACCCAGGATCACAACAGTTG+AGG | 0.637431 | 5.4:+13965706 | None:intergenic |
| ATATGTATTTCAGCTAGCTG+GGG | 0.644095 | 5.4:-13966765 | MS.gene060547:intron |
| ACACCCCAAAGTTTCATATG+CGG | 0.685445 | 5.4:-13967183 | MS.gene060547:CDS |
| TGAGAACGATAACTGCCACC+GGG | 0.688112 | 5.4:+13965761 | None:intergenic |
| GTGGCTGTAGAGGTCACTGG+TGG | 0.707904 | 5.4:-13966740 | MS.gene060547:CDS |
| GAATTAGGCTTCAATCCCGG+TGG | 0.713172 | 5.4:-13965776 | MS.gene060547:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTATAAAATAACC+TGG | + | chr5.4:13965998-13966017 | None:intergenic | 10.0% |
| !! | AAGATTAATAAGCAAAAAAT+TGG | + | chr5.4:13965896-13965915 | None:intergenic | 15.0% |
| !! | ATTAATCATGTGTAAAAATA+TGG | + | chr5.4:13966302-13966321 | None:intergenic | 15.0% |
| !! | ATTATTATAGTAGTATTATG+AGG | - | chr5.4:13966555-13966574 | MS.gene060547:CDS | 15.0% |
| !! | TGTATAAAAAACTATATTTC+AGG | - | chr5.4:13966715-13966734 | MS.gene060547:CDS | 15.0% |
| !! | TTCTTCAAGAAATATAATAA+AGG | + | chr5.4:13966861-13966880 | None:intergenic | 15.0% |
| !!! | ATAGTATTATGTATTTTTTG+TGG | - | chr5.4:13967272-13967291 | MS.gene060547:intron | 15.0% |
| !!! | GTTCTCTATTTTTTTTTTTT+TGG | - | chr5.4:13967216-13967235 | MS.gene060547:intron | 15.0% |
| !!! | TAATGATTTTGAATTTTACT+AGG | - | chr5.4:13967299-13967318 | MS.gene060547:intron | 15.0% |
| !!! | TATTTTTACACATGATTAAT+CGG | - | chr5.4:13966302-13966321 | MS.gene060547:intron | 15.0% |
| !!! | TTAATTCATATTCAATTTTG+TGG | + | chr5.4:13966252-13966271 | None:intergenic | 15.0% |
| !! | AATACAAGATTAACATAAAC+AGG | - | chr5.4:13967064-13967083 | MS.gene060547:intron | 20.0% |
| !! | AATTCACTTGAATAAATGAT+TGG | - | chr5.4:13966148-13966167 | MS.gene060547:intron | 20.0% |
| !! | ATACAAGATTAACATAAACA+GGG | - | chr5.4:13967065-13967084 | MS.gene060547:intron | 20.0% |
| !! | ATTATAAAATAACCTGGTAA+AGG | + | chr5.4:13965992-13966011 | None:intergenic | 20.0% |
| !! | CTAGATTAAGTTAAAGATTA+TGG | - | chr5.4:13966176-13966195 | MS.gene060547:CDS | 20.0% |
| !! | TCATTCATTTCAATTGATAA+GGG | - | chr5.4:13966901-13966920 | MS.gene060547:intron | 20.0% |
| !!! | TATTTTGAATTAGGATTCAT+TGG | - | chr5.4:13966583-13966602 | MS.gene060547:intron | 20.0% |
| ! | AGTGTTTGAATTATTATGGT+TGG | + | chr5.4:13966837-13966856 | None:intergenic | 25.0% |
| ! | ATAATCAAGATATTAACGTG+TGG | - | chr5.4:13966031-13966050 | MS.gene060547:CDS | 25.0% |
| ! | CATAATCAACTGCAAAAATA+TGG | - | chr5.4:13966123-13966142 | MS.gene060547:intron | 25.0% |
| ! | CATGATTTAATTACCTTGTT+TGG | + | chr5.4:13966639-13966658 | None:intergenic | 25.0% |
| ! | CTCATTCATTTCAATTGATA+AGG | - | chr5.4:13966900-13966919 | MS.gene060547:intron | 25.0% |
| ! | TAGATTGTTACTAAATCATG+AGG | + | chr5.4:13966525-13966544 | None:intergenic | 25.0% |
| ! | TTATGTACAAAAATGTTTCG+TGG | - | chr5.4:13966069-13966088 | MS.gene060547:intron | 25.0% |
| !!! | AATTAATTTGTACCAAAGTG+TGG | + | chr5.4:13966813-13966832 | None:intergenic | 25.0% |
| !!! | AGGAAGTGTTTGAATTATTA+TGG | + | chr5.4:13966841-13966860 | None:intergenic | 25.0% |
| !!! | ATGTAGTTTGTTTTTGTCAA+AGG | - | chr5.4:13966205-13966224 | MS.gene060547:CDS | 25.0% |
| !!! | GAGGTGTTTTATTTTGAATT+AGG | - | chr5.4:13966574-13966593 | MS.gene060547:intron | 25.0% |
| !!! | TTTTTTGTTTTGAGAAACAG+AGG | - | chr5.4:13965929-13965948 | MS.gene060547:intron | 25.0% |
| AAAACAGCTGTTGAATTATG+TGG | - | chr5.4:13965811-13965830 | MS.gene060547:CDS | 30.0% | |
| AAACAGGGAACTAATGAAAT+TGG | - | chr5.4:13967080-13967099 | MS.gene060547:intron | 30.0% | |
| AAGAGTTATCAAACTTGAGA+GGG | + | chr5.4:13966975-13966994 | None:intergenic | 30.0% | |
| ATATGTTGAACTCTATGCTA+AGG | - | chr5.4:13967167-13967186 | MS.gene060547:intron | 30.0% | |
| CATAGAGTTCAACATATTTG+CGG | + | chr5.4:13967164-13967183 | None:intergenic | 30.0% | |
| CATTTCAATTGATAAGGGTA+AGG | - | chr5.4:13966906-13966925 | MS.gene060547:intron | 30.0% | |
| TAAGAGTTATCAAACTTGAG+AGG | + | chr5.4:13966976-13966995 | None:intergenic | 30.0% | |
| TATATGTATTTCAGCTAGCT+GGG | - | chr5.4:13966382-13966401 | MS.gene060547:CDS | 30.0% | |
| TGATTCCTTATAGAACCATT+TGG | + | chr5.4:13965757-13965776 | None:intergenic | 30.0% | |
| TTATATGTATTTCAGCTAGC+TGG | - | chr5.4:13966381-13966400 | MS.gene060547:CDS | 30.0% | |
| AAAGATCGCTCTAACTTTGA+AGG | - | chr5.4:13966934-13966953 | MS.gene060547:intron | 35.0% | |
| ATATGTATTTCAGCTAGCTG+GGG | - | chr5.4:13966383-13966402 | MS.gene060547:CDS | 35.0% | |
| ATGTACTAGTACCTTTCTTC+CGG | + | chr5.4:13966454-13966473 | None:intergenic | 35.0% | |
| CACAAGAAACTCTCTGAATT+AGG | - | chr5.4:13967357-13967376 | MS.gene060547:CDS | 35.0% | |
| TTATCGTTCTCAATTGGCTA+AGG | - | chr5.4:13967398-13967417 | MS.gene060547:CDS | 35.0% | |
| ! | AAGAGAGATCTTTTATCGCA+TGG | - | chr5.4:13966750-13966769 | MS.gene060547:CDS | 35.0% |
| ! | AGAGAGATCTTTTATCGCAT+GGG | - | chr5.4:13966751-13966770 | MS.gene060547:CDS | 35.0% |
| ! | TAATTACCTTGTTTGGCATC+TGG | + | chr5.4:13966632-13966651 | None:intergenic | 35.0% |
| AAAGACATTGTAGCTCTCTC+CGG | - | chr5.4:13966784-13966803 | MS.gene060547:intron | 40.0% | |
| AAGGTCCGCATATGAAACTT+TGG | + | chr5.4:13965973-13965992 | None:intergenic | 40.0% | |
| ACACCCCAAAGTTTCATATG+CGG | - | chr5.4:13965965-13965984 | MS.gene060547:intron | 40.0% | |
| ACGACGCAAAAACAAGAACA+GGG | - | chr5.4:13965728-13965747 | MS.gene060547:CDS | 40.0% | |
| AGGTCCGCATATGAAACTTT+GGG | + | chr5.4:13965972-13965991 | None:intergenic | 40.0% | |
| ATTGAAGCTTCCTACAGACA+AGG | - | chr5.4:13967116-13967135 | MS.gene060547:intron | 40.0% | |
| CCAACTATTCACTTTGTTCC+CGG | - | chr5.4:13966432-13966451 | MS.gene060547:intron | 40.0% | |
| GAATTATGTGGTCAGTGAGA+CGG | - | chr5.4:13965823-13965842 | MS.gene060547:CDS | 40.0% | |
| GATATTAACGTGTGGAGTCA+TGG | - | chr5.4:13966039-13966058 | MS.gene060547:CDS | 40.0% | |
| TACGACGCAAAAACAAGAAC+AGG | - | chr5.4:13965727-13965746 | MS.gene060547:CDS | 40.0% | |
| TCAACATATTTGCGGAATGC+AGG | + | chr5.4:13967156-13967175 | None:intergenic | 40.0% | |
| TCATTGGAATCTCCACAAGA+AGG | - | chr5.4:13966599-13966618 | MS.gene060547:intron | 40.0% | |
| TCTGAATTAGGCTTCAATCC+CGG | - | chr5.4:13967369-13967388 | MS.gene060547:CDS | 40.0% | |
| TGGCAGTTATCGTTCTCAAT+TGG | - | chr5.4:13967392-13967411 | MS.gene060547:CDS | 40.0% | |
| TGTACTAGTACCTTTCTTCC+GGG | + | chr5.4:13966453-13966472 | None:intergenic | 40.0% | |
| TTGAGAAACAGAGGAAGTGA+AGG | - | chr5.4:13965938-13965957 | MS.gene060547:intron | 40.0% | |
| ! | GCTCTAACTTTGAAGGTCAA+TGG | - | chr5.4:13966941-13966960 | MS.gene060547:intron | 40.0% |
| CAATTGGCTAAGGCAGCTTT+AGG | - | chr5.4:13967408-13967427 | MS.gene060547:CDS | 45.0% | |
| CCGGGAACAAAGTGAATAGT+TGG | + | chr5.4:13966435-13966454 | None:intergenic | 45.0% | |
| CCTTGCACGTGTGCTAAAAA+GGG | - | chr5.4:13966326-13966345 | MS.gene060547:intron | 45.0% | |
| CGACGCAAAAACAAGAACAG+GGG | - | chr5.4:13965729-13965748 | MS.gene060547:CDS | 45.0% | |
| CTGAACCATGCTGCTAACAA+GGG | - | chr5.4:13965784-13965803 | MS.gene060547:CDS | 45.0% | |
| GACGCAAAAACAAGAACAGG+GGG | - | chr5.4:13965730-13965749 | MS.gene060547:CDS | 45.0% | |
| GGTCCGCATATGAAACTTTG+GGG | + | chr5.4:13965971-13965990 | None:intergenic | 45.0% | |
| TCACTTTGTTCCCGGAAGAA+AGG | - | chr5.4:13966440-13966459 | MS.gene060547:intron | 45.0% | |
| TCCTTGCACGTGTGCTAAAA+AGG | - | chr5.4:13966325-13966344 | MS.gene060547:intron | 45.0% | |
| TTCATATGCGGACCTTTACC+AGG | - | chr5.4:13965977-13965996 | MS.gene060547:intron | 45.0% | |
| TTGAGAACGATAACTGCCAC+CGG | + | chr5.4:13967391-13967410 | None:intergenic | 45.0% | |
| ! | GGGGTCCAAATGGTTCTATA+AGG | - | chr5.4:13965749-13965768 | MS.gene060547:CDS | 45.0% |
| ! | TACCTTGTTTGGCATCTGGA+AGG | + | chr5.4:13966628-13966647 | None:intergenic | 45.0% |
| ! | TCAACTAGAGCCTTGTCTGT+AGG | + | chr5.4:13967129-13967148 | None:intergenic | 45.0% |
| !! | AAAATTAATTAAACAAATTA+AGG | + | chr5.4:13965855-13965874 | None:intergenic | 5.0% |
| ACAAGAACAGGGGGTCCAAA+TGG | - | chr5.4:13965739-13965758 | MS.gene060547:CDS | 50.0% | |
| ATTTCAGCTAGCTGGGGTTG+TGG | - | chr5.4:13966389-13966408 | MS.gene060547:CDS | 50.0% | |
| GAATTAGGCTTCAATCCCGG+TGG | - | chr5.4:13967372-13967391 | MS.gene060547:CDS | 50.0% | |
| GCCTCAACTGTTGTGATCCT+GGG | - | chr5.4:13967441-13967460 | MS.gene060547:CDS | 50.0% | |
| GCTGAACCATGCTGCTAACA+AGG | - | chr5.4:13965783-13965802 | MS.gene060547:CDS | 50.0% | |
| TCAAGCCCTTGTTAGCAGCA+TGG | + | chr5.4:13965792-13965811 | None:intergenic | 50.0% | |
| TGAGAACGATAACTGCCACC+GGG | + | chr5.4:13967390-13967409 | None:intergenic | 50.0% | |
| TGCCTCAACTGTTGTGATCC+TGG | - | chr5.4:13967440-13967459 | MS.gene060547:CDS | 50.0% | |
| TTATGTGGTCAGTGAGACGG+TGG | - | chr5.4:13965826-13965845 | MS.gene060547:CDS | 50.0% | |
| TTGTACCAAAGTGTGGCCTC+CGG | + | chr5.4:13966806-13966825 | None:intergenic | 50.0% | |
| !! | CCCTTTTTAGCACACGTGCA+AGG | + | chr5.4:13966329-13966348 | None:intergenic | 50.0% |
| !! | GGCTAAGGCAGCTTTAGGAA+TGG | - | chr5.4:13967413-13967432 | MS.gene060547:CDS | 50.0% |
| CGCCTTCCAGATGCCAAACA+AGG | - | chr5.4:13966623-13966642 | MS.gene060547:intron | 55.0% | |
| GACATTGTAGCTCTCTCCGG+AGG | - | chr5.4:13966787-13966806 | MS.gene060547:intron | 55.0% | |
| GTTGTGGCTGTAGAGGTCAC+TGG | - | chr5.4:13966405-13966424 | MS.gene060547:CDS | 55.0% | |
| TCTGGAAGGCGACCTTCTTG+TGG | + | chr5.4:13966614-13966633 | None:intergenic | 55.0% | |
| AGCTGGGGTTGTGGCTGTAG+AGG | - | chr5.4:13966398-13966417 | MS.gene060547:CDS | 60.0% | |
| GTGGCTGTAGAGGTCACTGG+TGG | - | chr5.4:13966408-13966427 | MS.gene060547:CDS | 60.0% | |
| TCTCTCCGGAGGCCACACTT+TGG | - | chr5.4:13966798-13966817 | MS.gene060547:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 13965708 | 13967462 | 13965708 | ID=MS.gene060547 |
| chr5.4 | mRNA | 13965708 | 13967462 | 13965708 | ID=MS.gene060547.t1;Parent=MS.gene060547 |
| chr5.4 | exon | 13967338 | 13967462 | 13967338 | ID=MS.gene060547.t1.exon1;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13967338 | 13967462 | 13967338 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| chr5.4 | exon | 13967172 | 13967221 | 13967172 | ID=MS.gene060547.t1.exon2;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13967172 | 13967221 | 13967172 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| chr5.4 | exon | 13966709 | 13966774 | 13966709 | ID=MS.gene060547.t1.exon3;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13966709 | 13966774 | 13966709 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| chr5.4 | exon | 13966526 | 13966574 | 13966526 | ID=MS.gene060547.t1.exon4;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13966526 | 13966574 | 13966526 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| chr5.4 | exon | 13966351 | 13966433 | 13966351 | ID=MS.gene060547.t1.exon5;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13966351 | 13966433 | 13966351 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| chr5.4 | exon | 13966169 | 13966248 | 13966169 | ID=MS.gene060547.t1.exon6;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13966169 | 13966248 | 13966169 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| chr5.4 | exon | 13965982 | 13966084 | 13965982 | ID=MS.gene060547.t1.exon7;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13965982 | 13966084 | 13965982 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| chr5.4 | exon | 13965708 | 13965849 | 13965708 | ID=MS.gene060547.t1.exon8;Parent=MS.gene060547.t1 |
| chr5.4 | CDS | 13965708 | 13965849 | 13965708 | ID=cds.MS.gene060547.t1;Parent=MS.gene060547.t1 |
| Gene Sequence |
| Protein sequence |
