Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84497.t1 | XP_013466946.1 | 97.4 | 701 | 18 | 0 | 1 | 701 | 1 | 701 | 0.00E+00 | 1404.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84497.t1 | Q9SS87 | 27.6 | 721 | 441 | 24 | 27 | 683 | 34 | 737 | 7.4e-63 | 243.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84497.t1 | E2FKJ2 | 97.4 | 701 | 18 | 0 | 1 | 701 | 1 | 701 | 0.0e+00 | 1404.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049698 | MS.gene84497 | 0.804691 | 1.91E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene84497 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene05017 | MS.gene84497 | 0.815499 | 8.96E-52 | -1.69E-46 |
| MS.gene051646 | MS.gene84497 | 0.802065 | 6.70E-49 | -1.69E-46 |
| MS.gene054118 | MS.gene84497 | 0.841514 | 4.54E-58 | -1.69E-46 |
| MS.gene055131 | MS.gene84497 | 0.811352 | 7.31E-51 | -1.69E-46 |
| MS.gene055777 | MS.gene84497 | 0.816076 | 6.66E-52 | -1.69E-46 |
| MS.gene058823 | MS.gene84497 | 0.823268 | 1.52E-53 | -1.69E-46 |
| MS.gene058909 | MS.gene84497 | 0.857405 | 1.67E-62 | -1.69E-46 |
| MS.gene058912 | MS.gene84497 | 0.857147 | 1.99E-62 | -1.69E-46 |
| MS.gene060547 | MS.gene84497 | 0.807538 | 4.81E-50 | -1.69E-46 |
| MS.gene060825 | MS.gene84497 | 0.85332 | 2.58E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84497.t1 | MTR_1g040360 | 97.432 | 701 | 18 | 0 | 1 | 701 | 1 | 701 | 0.0 | 1431 |
| MS.gene84497.t1 | MTR_1g075180 | 46.852 | 683 | 310 | 15 | 16 | 687 | 2 | 642 | 0.0 | 586 |
| MS.gene84497.t1 | MTR_1g075153 | 42.544 | 684 | 356 | 9 | 2 | 677 | 8 | 662 | 0.0 | 548 |
| MS.gene84497.t1 | MTR_1g075170 | 42.522 | 682 | 357 | 13 | 5 | 677 | 11 | 666 | 1.59e-171 | 507 |
| MS.gene84497.t1 | MTR_1g074950 | 37.668 | 669 | 392 | 11 | 24 | 685 | 20 | 670 | 3.35e-150 | 452 |
| MS.gene84497.t1 | MTR_1g074990 | 36.132 | 667 | 402 | 10 | 25 | 685 | 20 | 668 | 3.08e-149 | 449 |
| MS.gene84497.t1 | MTR_1g075230 | 35.693 | 664 | 397 | 11 | 24 | 677 | 19 | 662 | 4.33e-142 | 431 |
| MS.gene84497.t1 | MTR_1g075095 | 35.347 | 662 | 402 | 11 | 25 | 678 | 20 | 663 | 7.82e-140 | 425 |
| MS.gene84497.t1 | MTR_1g075030 | 35.045 | 662 | 404 | 11 | 25 | 678 | 20 | 663 | 2.22e-139 | 424 |
| MS.gene84497.t1 | MTR_7g032660 | 30.186 | 699 | 423 | 23 | 30 | 677 | 26 | 710 | 5.49e-87 | 288 |
| MS.gene84497.t1 | MTR_8g089660 | 29.037 | 706 | 421 | 25 | 30 | 677 | 20 | 703 | 1.96e-75 | 257 |
| MS.gene84497.t1 | MTR_3g075450 | 28.177 | 724 | 449 | 23 | 3 | 676 | 2 | 704 | 1.06e-71 | 247 |
| MS.gene84497.t1 | MTR_8g063020 | 38.798 | 183 | 85 | 6 | 93 | 274 | 36 | 192 | 1.28e-20 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84497.t1 | AT3G01680 | 27.716 | 718 | 444 | 23 | 27 | 683 | 34 | 737 | 5.43e-67 | 234 |
| MS.gene84497.t1 | AT3G01670 | 25.369 | 745 | 452 | 26 | 4 | 676 | 108 | 820 | 6.34e-50 | 187 |
| MS.gene84497.t1 | AT3G01670 | 25.369 | 745 | 452 | 26 | 4 | 676 | 132 | 844 | 1.26e-49 | 187 |
| MS.gene84497.t1 | AT1G67790 | 24.319 | 514 | 345 | 15 | 28 | 517 | 9 | 502 | 6.21e-28 | 120 |
Find 139 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAATCGTTCCTCGTTTC+TGG | 0.066845 | 1.1:+24484006 | MS.gene84497:CDS |
| CTCAAAAGTGGAATTGGTTT+TGG | 0.154712 | 1.1:+24483512 | MS.gene84497:CDS |
| TTCCATTGTAAGCAAATTAA+AGG | 0.155216 | 1.1:+24482375 | MS.gene84497:CDS |
| CATTAGAATATGGAAATTTC+TGG | 0.161510 | 1.1:+24481790 | MS.gene84497:CDS |
| GCAAAGTCATGTGTCCATTT+TGG | 0.177728 | 1.1:-24483897 | None:intergenic |
| CATGTGTTGGTATTCATTTC+AGG | 0.222644 | 1.1:+24483115 | MS.gene84497:CDS |
| AGATTCCTGTTGCTGTTTAT+TGG | 0.243721 | 1.1:+24482030 | MS.gene84497:CDS |
| AAATCATATGCATTGCATTA+TGG | 0.255922 | 1.1:-24483435 | None:intergenic |
| CAGAAATATGCTTCAGTTTA+CGG | 0.256894 | 1.1:-24480965 | None:intergenic |
| TCTATCCCTTGGCTGGAATA+AGG | 0.257305 | 1.1:+24483338 | MS.gene84497:CDS |
| GAAGACAGACTTCCCTTATC+TGG | 0.274120 | 1.1:+24480927 | MS.gene84497:CDS |
| GTGAATGTGAATCAGATTAA+AGG | 0.277979 | 1.1:+24483840 | MS.gene84497:intron |
| AGTCTTCCACAATGAAATTC+AGG | 0.283440 | 1.1:+24482673 | MS.gene84497:CDS |
| GATTCCTGTTGCTGTTTATT+GGG | 0.286090 | 1.1:+24482031 | MS.gene84497:CDS |
| ATGGAGGAACAGACCCAAAA+TGG | 0.329313 | 1.1:+24483883 | MS.gene84497:CDS |
| TTTGAATCAGGACAGTAAAT+AGG | 0.340556 | 1.1:-24484350 | None:intergenic |
| GACACATTCATCTTCATATA+TGG | 0.340751 | 1.1:+24483864 | MS.gene84497:CDS |
| CAGGTGAGCTAGAAGATTAC+TGG | 0.342565 | 1.1:+24482594 | MS.gene84497:intron |
| CACTTACTCAAAAGTGGAAT+TGG | 0.346280 | 1.1:+24483506 | MS.gene84497:CDS |
| GTTCTTCCACAGTTTGAATC+AGG | 0.348453 | 1.1:-24484362 | None:intergenic |
| AGGTTAGCATCGAAGTGTTT+AGG | 0.358989 | 1.1:+24483086 | MS.gene84497:intron |
| TTATCATCACTCCATGCTAA+TGG | 0.362851 | 1.1:-24480659 | None:intergenic |
| TGAATGTGAATCAGATTAAA+GGG | 0.366060 | 1.1:+24483841 | MS.gene84497:intron |
| CAAATTCAGCTTTGTGAAGT+AGG | 0.370216 | 1.1:-24483273 | None:intergenic |
| GAAGAACCAAGAGAACTAAA+AGG | 0.372963 | 1.1:+24483196 | MS.gene84497:CDS |
| TTGGAAAAGCTTTCAACAAA+AGG | 0.397341 | 1.1:+24481963 | MS.gene84497:CDS |
| TATCATCACTCCATGCTAAT+GGG | 0.399622 | 1.1:-24480658 | None:intergenic |
| AGGGTCCAATCATCCACAAT+TGG | 0.400463 | 1.1:-24483253 | None:intergenic |
| CATTGCTGATTACAACAGTT+TGG | 0.400657 | 1.1:+24481902 | MS.gene84497:CDS |
| CGACCGAGCAGTTTCACATT+TGG | 0.403560 | 1.1:-24484155 | None:intergenic |
| CTTACAAGGTCTTGGAGTCT+TGG | 0.407678 | 1.1:-24483556 | None:intergenic |
| TCATCGTCTGTGGGACGAAA+AGG | 0.411574 | 1.1:-24483481 | None:intergenic |
| TTCTTGTAGTCCAGCGTAGA+TGG | 0.412320 | 1.1:-24483176 | None:intergenic |
| AATTTGTACTTACAAGGTCT+TGG | 0.416127 | 1.1:-24483564 | None:intergenic |
| CACCGGTGTGGACATGAGTT+AGG | 0.420531 | 1.1:-24480700 | None:intergenic |
| ATCGTTCCTCGTTTCTGGAT+TGG | 0.420969 | 1.1:+24484011 | MS.gene84497:CDS |
| AAAACCTCAACAATTTCTGT+TGG | 0.423007 | 1.1:-24482641 | None:intergenic |
| GGGTTCAGAACAGGTAGAAT+TGG | 0.427233 | 1.1:-24483394 | None:intergenic |
| CACCACTTGGTGTTTGAACT+AGG | 0.444045 | 1.1:-24481815 | None:intergenic |
| AAGATTACTGGAGGCGTAAG+AGG | 0.445082 | 1.1:+24482606 | MS.gene84497:CDS |
| ATAGCCCAATAAACAGCAAC+AGG | 0.445960 | 1.1:-24482035 | None:intergenic |
| GGATCCCAATTGTGGATGAT+TGG | 0.449147 | 1.1:+24483248 | MS.gene84497:CDS |
| GAGTACTTCTATCCCTTGGC+TGG | 0.451475 | 1.1:+24483331 | MS.gene84497:CDS |
| TGCATATTAGCACAAGCAAC+AGG | 0.456296 | 1.1:-24484296 | None:intergenic |
| TAGATGATGAGCACACTTCC+TGG | 0.460640 | 1.1:+24481672 | MS.gene84497:intron |
| GCCTAACATGTCGTCTTCAA+TGG | 0.463271 | 1.1:+24480577 | None:intergenic |
| CGCTGATAGTGTTGCATCCA+AGG | 0.468545 | 1.1:+24480787 | MS.gene84497:CDS |
| GCTCCTCCTGCTGAGGGTGG+TGG | 0.470510 | 1.1:+24484446 | MS.gene84497:CDS |
| AGCCTTTAATTTGCTTACAA+TGG | 0.473426 | 1.1:-24482377 | None:intergenic |
| CTACCTAGAGGGTTCAGAAC+AGG | 0.476347 | 1.1:-24483403 | None:intergenic |
| CTGTCTTCTACAAGACCTAC+AGG | 0.477249 | 1.1:-24480912 | None:intergenic |
| AAATTCAGCTTTGTGAAGTA+GGG | 0.482259 | 1.1:-24483272 | None:intergenic |
| AGGAGGCTCATAACCAGATA+AGG | 0.484803 | 1.1:-24480940 | None:intergenic |
| TGATGGCTTGAACAGACAAA+TGG | 0.485289 | 1.1:+24482709 | MS.gene84497:CDS |
| CAAACAAGACCAGCCAGGTT+GGG | 0.490006 | 1.1:+24484115 | MS.gene84497:CDS |
| ATGAGTCACTTACTCAAAAG+TGG | 0.491847 | 1.1:+24483500 | MS.gene84497:CDS |
| TCTCGTCTCTTATGCTGTCT+AGG | 0.493672 | 1.1:-24483138 | None:intergenic |
| AAGAAGATTTCAAGATCTTG+TGG | 0.495575 | 1.1:+24483227 | MS.gene84497:CDS |
| TATGGGATTTCAGCTGATCA+AGG | 0.497173 | 1.1:-24481728 | None:intergenic |
| ATCAGCTGAAATCCCATACA+TGG | 0.498650 | 1.1:+24481733 | MS.gene84497:CDS |
| ACATTACTTGCAAGTGAAGC+TGG | 0.499453 | 1.1:-24480602 | None:intergenic |
| ACAAGGAGCAGAAAGCATAT+AGG | 0.503383 | 1.1:+24482406 | MS.gene84497:CDS |
| CGCTGAAGCTCCTCCTGCTG+AGG | 0.509635 | 1.1:+24484439 | MS.gene84497:CDS |
| AATTAAAGGCTCATCTTACA+AGG | 0.509783 | 1.1:+24482389 | MS.gene84497:CDS |
| GGGTCCAATCATCCACAATT+GGG | 0.510095 | 1.1:-24483252 | None:intergenic |
| GGAGGCTCATAACCAGATAA+GGG | 0.525657 | 1.1:-24480939 | None:intergenic |
| ACACCAAGTGGTGACTCACT+TGG | 0.527054 | 1.1:+24481825 | MS.gene84497:CDS |
| CATCGTCTGTGGGACGAAAA+GGG | 0.527183 | 1.1:-24483480 | None:intergenic |
| GGTTGAGTACTTCTATCCCT+TGG | 0.529205 | 1.1:+24483327 | MS.gene84497:CDS |
| CTACCTGTTCTGAACCCTCT+AGG | 0.529548 | 1.1:+24483400 | MS.gene84497:CDS |
| ACTGAAGCATATTTCTGCCC+AGG | 0.531572 | 1.1:+24480971 | MS.gene84497:CDS |
| CTGAAATCCCATACATGGGA+TGG | 0.532648 | 1.1:+24481738 | MS.gene84497:CDS |
| TATCAACCTTATTCCAGCCA+AGG | 0.535936 | 1.1:-24483344 | None:intergenic |
| TGCTTGTGCTAATATGCAGT+TGG | 0.535959 | 1.1:+24484301 | MS.gene84497:CDS |
| ATGTGAGCATGGTGCTCACC+AGG | 0.537625 | 1.1:-24481690 | None:intergenic |
| GAGTTAGGTAAACGGTTTCG+AGG | 0.540103 | 1.1:-24480685 | None:intergenic |
| TTCCACATCGTACCTTTCAC+CGG | 0.543184 | 1.1:-24480717 | None:intergenic |
| TGGCAGACTGGGACTCCTGT+AGG | 0.544529 | 1.1:+24480897 | MS.gene84497:intron |
| TTCAAGCCATCAAAGACAAG+GGG | 0.551538 | 1.1:-24482698 | None:intergenic |
| GTAATAGAGCATTTCCACTT+CGG | 0.551983 | 1.1:+24483972 | MS.gene84497:CDS |
| TTAGTAGAACCCAACCTGGC+TGG | 0.552075 | 1.1:-24484124 | None:intergenic |
| TGCATAGCTTCAGACAAAGC+AGG | 0.554275 | 1.1:-24482005 | None:intergenic |
| TGTCTCAAACAAGACCAGCC+AGG | 0.555894 | 1.1:+24484110 | MS.gene84497:CDS |
| GTGGACATGAGTTAGGTAAA+CGG | 0.556772 | 1.1:-24480693 | None:intergenic |
| CTTCCAAGTGAGTCACCACT+TGG | 0.558326 | 1.1:-24481828 | None:intergenic |
| TGTTGAGTGTATTACTGAGT+TGG | 0.559184 | 1.1:+24481944 | MS.gene84497:CDS |
| ACAAAACCACCACCCTCAGC+AGG | 0.559480 | 1.1:-24484452 | None:intergenic |
| ATCAACCTTATTCCAGCCAA+GGG | 0.563390 | 1.1:-24483343 | None:intergenic |
| AACACTATCAGCGACTGCAC+TGG | 0.566260 | 1.1:-24480777 | None:intergenic |
| CTCATGTCCACACCGGTGAA+AGG | 0.569357 | 1.1:+24480705 | MS.gene84497:CDS |
| TAGCAATCGAGAAAATCAAA+AGG | 0.570446 | 1.1:+24483922 | MS.gene84497:CDS |
| TCAAACAAGACCAGCCAGGT+TGG | 0.571127 | 1.1:+24484114 | MS.gene84497:CDS |
| GTTAGCTACAAGTGTTGCCA+TGG | 0.571157 | 1.1:+24484401 | MS.gene84497:CDS |
| TGCTTCAGTTTACGGATAGG+AGG | 0.575601 | 1.1:-24480957 | None:intergenic |
| AGTAAGTGACTCATCGTCTG+TGG | 0.575727 | 1.1:-24483491 | None:intergenic |
| AACTCCAACAGAAATTGTTG+AGG | 0.575818 | 1.1:+24482637 | MS.gene84497:CDS |
| GTTTAGGAGGAAGCATGTGT+TGG | 0.578541 | 1.1:+24483102 | MS.gene84497:CDS |
| AGATTACTGGAGGCGTAAGA+GGG | 0.582113 | 1.1:+24482607 | MS.gene84497:CDS |
| ATATGCTTCAGTTTACGGAT+AGG | 0.583335 | 1.1:-24480960 | None:intergenic |
| AAACTTCAAACCCATTAGCA+TGG | 0.583737 | 1.1:+24480648 | MS.gene84497:CDS |
| AATGTGAAACTGCTCGGTCG+CGG | 0.586302 | 1.1:+24484158 | MS.gene84497:CDS |
| ATAGGATCAAGAATATCAGA+AGG | 0.591889 | 1.1:-24484332 | None:intergenic |
| GATCTTGTGGATCCCAATTG+TGG | 0.592782 | 1.1:+24483240 | MS.gene84497:CDS |
| TACTGTCCTGATTCAAACTG+TGG | 0.599493 | 1.1:+24484356 | MS.gene84497:CDS |
| CTTCTTCAATCCATCTACGC+TGG | 0.599801 | 1.1:+24483166 | MS.gene84497:CDS |
| TTAGCATCGAAGTGTTTAGG+AGG | 0.599845 | 1.1:+24483089 | MS.gene84497:CDS |
| TTCAAACTGTGGAAGAACAA+TGG | 0.600916 | 1.1:+24484367 | MS.gene84497:CDS |
| GCTAGAAATGCCATGGTATG+TGG | 0.603153 | 1.1:+24483306 | MS.gene84497:CDS |
| GGACCAAATGTGAAACTGCT+CGG | 0.603872 | 1.1:+24484152 | MS.gene84497:CDS |
| GGTTCACAATCCTACCTAGA+GGG | 0.606256 | 1.1:-24483414 | None:intergenic |
| CTGTTCTGAACCCTCTAGGT+AGG | 0.607740 | 1.1:+24483404 | MS.gene84497:CDS |
| GTCTGTGGGACGAAAAGGGA+AGG | 0.608345 | 1.1:-24483476 | None:intergenic |
| CAAACTGTTGTAATCAGCAA+TGG | 0.608903 | 1.1:-24481901 | None:intergenic |
| ACTTGAAGCTAGAAATGCCA+TGG | 0.609318 | 1.1:+24483299 | MS.gene84497:CDS |
| AAACCACCACCCTCAGCAGG+AGG | 0.610776 | 1.1:-24484449 | None:intergenic |
| ACATTGTTGTCATGTGAGCA+TGG | 0.611775 | 1.1:-24481701 | None:intergenic |
| GCTGAAGCTCCTCCTGCTGA+GGG | 0.612979 | 1.1:+24484440 | MS.gene84497:CDS |
| GAAGCTCCTCCTGCTGAGGG+TGG | 0.614085 | 1.1:+24484443 | MS.gene84497:CDS |
| GTGTCAGCTTATAGCCAACA+AGG | 0.616261 | 1.1:+24480623 | MS.gene84497:CDS |
| TGTTCAAGCCATCAAAGACA+AGG | 0.620643 | 1.1:-24482700 | None:intergenic |
| TTGCTTAGTAGAACCCAACC+TGG | 0.620916 | 1.1:-24484128 | None:intergenic |
| ACATTCATCTTCATATATGG+AGG | 0.630288 | 1.1:+24483867 | MS.gene84497:CDS |
| TAGGATCAAGAATATCAGAA+GGG | 0.639927 | 1.1:-24484331 | None:intergenic |
| CATCGTACCTTTCACCGGTG+TGG | 0.641644 | 1.1:-24480712 | None:intergenic |
| GTTCAAGCCATCAAAGACAA+GGG | 0.644512 | 1.1:-24482699 | None:intergenic |
| GTAAGTGACTCATCGTCTGT+GGG | 0.646679 | 1.1:-24483490 | None:intergenic |
| CGTTCTCGTGAGTATGACCA+TGG | 0.648414 | 1.1:-24484418 | None:intergenic |
| GGTTGGGTTCTACTAAGCAA+AGG | 0.652919 | 1.1:+24484131 | MS.gene84497:CDS |
| AAGTACTCAACCACATACCA+TGG | 0.655414 | 1.1:-24483316 | None:intergenic |
| CACCGGTGAAAGGTACGATG+TGG | 0.656165 | 1.1:+24480715 | MS.gene84497:CDS |
| CACCTAGTTCAAACACCAAG+TGG | 0.658165 | 1.1:+24481813 | MS.gene84497:CDS |
| TGGTTCACAATCCTACCTAG+AGG | 0.663403 | 1.1:-24483415 | None:intergenic |
| GAATGTGAATCAGATTAAAG+GGG | 0.681348 | 1.1:+24483842 | MS.gene84497:intron |
| TACCTAACTCATGTCCACAC+CGG | 0.681654 | 1.1:+24480698 | MS.gene84497:CDS |
| TCAGCTGAAATCCCATACAT+GGG | 0.682027 | 1.1:+24481734 | MS.gene84497:CDS |
| GTGAGCTAGAAGATTACTGG+AGG | 0.704760 | 1.1:+24482597 | MS.gene84497:CDS |
| TCAAATGTATGCAACTGCTG+TGG | 0.727594 | 1.1:+24484184 | MS.gene84497:CDS |
| TCTATGCCAATCCAGAAACG+AGG | 0.741708 | 1.1:-24484017 | None:intergenic |
| TCAAGCCATCAAAGACAAGG+GGG | 0.746571 | 1.1:-24482697 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAATTAATGATATTAG+TGG | + | chr1.1:24482212-24482231 | MS.gene84497:intron | 10.0% |
| !! | AAAATATTGTATCATTTGTT+TGG | + | chr1.1:24480877-24480896 | MS.gene84497:intron | 15.0% |
| !! | CATTAATTCACAATTATATT+TGG | - | chr1.1:24480853-24480872 | None:intergenic | 15.0% |
| !! | TATCATTAATAGTTATCATT+AGG | - | chr1.1:24482779-24482798 | None:intergenic | 15.0% |
| !! | TATTTAGTGACAAAATATAT+TGG | - | chr1.1:24482939-24482958 | None:intergenic | 15.0% |
| !! | TGTAAACATAAACAAATTTA+AGG | + | chr1.1:24481584-24481603 | MS.gene84497:intron | 15.0% |
| !!! | TGAATTTTTAATGCATTATT+TGG | + | chr1.1:24482496-24482515 | MS.gene84497:intron | 15.0% |
| !! | AAATGATTTCACAAAGTAAA+CGG | - | chr1.1:24483009-24483028 | None:intergenic | 20.0% |
| !! | ACATTGATATAAAAATTACC+TGG | - | chr1.1:24480992-24481011 | None:intergenic | 20.0% |
| !! | ATAAAATAAAATGTGCATGT+TGG | - | chr1.1:24481106-24481125 | None:intergenic | 20.0% |
| !! | CATTGATATAAAAATTACCT+GGG | - | chr1.1:24480991-24481010 | None:intergenic | 20.0% |
| !! | TTATAAAGCATACAACATTA+TGG | + | chr1.1:24482982-24483001 | MS.gene84497:intron | 20.0% |
| !!! | AATGCATATGATTTTTGTTT+GGG | + | chr1.1:24483444-24483463 | MS.gene84497:CDS | 20.0% |
| !!! | CTTTATTTGCTTTTTTTAGT+GGG | + | chr1.1:24482461-24482480 | MS.gene84497:intron | 20.0% |
| !!! | TAAATATAAACACCTTTTAG+CGG | - | chr1.1:24481276-24481295 | None:intergenic | 20.0% |
| !!! | TCTTTATTTGCTTTTTTTAG+TGG | + | chr1.1:24482460-24482479 | MS.gene84497:intron | 20.0% |
| ! | AAAACTTGATATTCGATCTA+AGG | + | chr1.1:24481452-24481471 | MS.gene84497:intron | 25.0% |
| ! | AAATCATATGCATTGCATTA+TGG | - | chr1.1:24483438-24483457 | None:intergenic | 25.0% |
| ! | CATTAGAATATGGAAATTTC+TGG | + | chr1.1:24481790-24481809 | MS.gene84497:CDS | 25.0% |
| ! | GCACACACATAAATTATAAT+CGG | - | chr1.1:24482568-24482587 | None:intergenic | 25.0% |
| ! | TCAAATACATGTATAGAAGT+TGG | - | chr1.1:24481160-24481179 | None:intergenic | 25.0% |
| ! | TGAATGTGAATCAGATTAAA+GGG | + | chr1.1:24483841-24483860 | MS.gene84497:intron | 25.0% |
| ! | TGTACTAAAAATCAGATCAT+AGG | + | chr1.1:24481033-24481052 | MS.gene84497:intron | 25.0% |
| ! | TTCCATTGTAAGCAAATTAA+AGG | + | chr1.1:24482375-24482394 | MS.gene84497:CDS | 25.0% |
| ! | TTGAAAATCAGTAGCAAAAT+CGG | + | chr1.1:24482901-24482920 | MS.gene84497:intron | 25.0% |
| ! | TTGCAAAATTTGTACTTACA+AGG | - | chr1.1:24483573-24483592 | None:intergenic | 25.0% |
| !! | AATCATCTTGATCTTCTTTT+TGG | + | chr1.1:24482080-24482099 | MS.gene84497:CDS | 25.0% |
| !! | ATTTTATTCCAGAGACAATT+AGG | + | chr1.1:24481216-24481235 | MS.gene84497:intron | 25.0% |
| !! | CAATGCATATGATTTTTGTT+TGG | + | chr1.1:24483443-24483462 | MS.gene84497:CDS | 25.0% |
| !! | CTCTATTTTACATTAGAAGA+GGG | - | chr1.1:24481412-24481431 | None:intergenic | 25.0% |
| !! | GGTTAGTTAATATTCAAATG+TGG | + | chr1.1:24482730-24482749 | MS.gene84497:intron | 25.0% |
| !! | TCTCTATTTTACATTAGAAG+AGG | - | chr1.1:24481413-24481432 | None:intergenic | 25.0% |
| !! | TTTTTATTCCTAATTGTCTC+TGG | - | chr1.1:24481227-24481246 | None:intergenic | 25.0% |
| !!! | ATGCATATGATTTTTGTTTG+GGG | + | chr1.1:24483445-24483464 | MS.gene84497:CDS | 25.0% |
| !!! | GTTTTCATGAACTTTTTTCA+GGG | + | chr1.1:24482312-24482331 | MS.gene84497:intron | 25.0% |
| !!! | TATGTAGTGTCGTTTTTTTT+AGG | - | chr1.1:24483715-24483734 | None:intergenic | 25.0% |
| !!! | TGTTTTCATGAACTTTTTTC+AGG | + | chr1.1:24482311-24482330 | MS.gene84497:intron | 25.0% |
| AAAACCTCAACAATTTCTGT+TGG | - | chr1.1:24482644-24482663 | None:intergenic | 30.0% | |
| AAGAAGATTTCAAGATCTTG+TGG | + | chr1.1:24483227-24483246 | MS.gene84497:CDS | 30.0% | |
| AATGATATTAGTGGTCAAAG+TGG | + | chr1.1:24482221-24482240 | MS.gene84497:intron | 30.0% | |
| AATTAAAGGCTCATCTTACA+AGG | + | chr1.1:24482389-24482408 | MS.gene84497:CDS | 30.0% | |
| AATTTGTACTTACAAGGTCT+TGG | - | chr1.1:24483567-24483586 | None:intergenic | 30.0% | |
| ACACTCTCATGAATATTACT+CGG | - | chr1.1:24482294-24482313 | None:intergenic | 30.0% | |
| ACATTCATCTTCATATATGG+AGG | + | chr1.1:24483867-24483886 | MS.gene84497:CDS | 30.0% | |
| AGTTACGAAAAGATATTCCA+AGG | - | chr1.1:24482127-24482146 | None:intergenic | 30.0% | |
| ATAGGATCAAGAATATCAGA+AGG | - | chr1.1:24484335-24484354 | None:intergenic | 30.0% | |
| CAGAAATATGCTTCAGTTTA+CGG | - | chr1.1:24480968-24480987 | None:intergenic | 30.0% | |
| CATAGGTAATATTAGAGACA+CGG | - | chr1.1:24481307-24481326 | None:intergenic | 30.0% | |
| GAATGTGAATCAGATTAAAG+GGG | + | chr1.1:24483842-24483861 | MS.gene84497:intron | 30.0% | |
| GACACATTCATCTTCATATA+TGG | + | chr1.1:24483864-24483883 | MS.gene84497:CDS | 30.0% | |
| GTCTCTAATATTACCTATGT+TGG | + | chr1.1:24481308-24481327 | MS.gene84497:intron | 30.0% | |
| GTGAATGTGAATCAGATTAA+AGG | + | chr1.1:24483840-24483859 | MS.gene84497:intron | 30.0% | |
| TAGCAATCGAGAAAATCAAA+AGG | + | chr1.1:24483922-24483941 | MS.gene84497:CDS | 30.0% | |
| TAGGATCAAGAATATCAGAA+GGG | - | chr1.1:24484334-24484353 | None:intergenic | 30.0% | |
| TCTAATATTACCTATGTTGG+AGG | + | chr1.1:24481311-24481330 | MS.gene84497:intron | 30.0% | |
| TTAGAAAATCGTATTCCCTT+TGG | - | chr1.1:24483773-24483792 | None:intergenic | 30.0% | |
| TTGGAAAAGCTTTCAACAAA+AGG | + | chr1.1:24481963-24481982 | MS.gene84497:CDS | 30.0% | |
| TTTGAATCAGGACAGTAAAT+AGG | - | chr1.1:24484353-24484372 | None:intergenic | 30.0% | |
| ! | AAATTCAGCTTTGTGAAGTA+GGG | - | chr1.1:24483275-24483294 | None:intergenic | 30.0% |
| ! | GCTGCATTTTCATTAGAATA+TGG | + | chr1.1:24481780-24481799 | MS.gene84497:CDS | 30.0% |
| ! | TGGTGTATTGACATATAGTA+AGG | + | chr1.1:24482241-24482260 | MS.gene84497:intron | 30.0% |
| !! | AGAAATTGTTGAGGTTTTGA+AGG | + | chr1.1:24482646-24482665 | MS.gene84497:CDS | 30.0% |
| !! | AGCCTTTAATTTGCTTACAA+TGG | - | chr1.1:24482380-24482399 | None:intergenic | 30.0% |
| !! | GGTTAATGTGTCGATTAATA+TGG | + | chr1.1:24482262-24482281 | MS.gene84497:intron | 30.0% |
| !! | GTTTTGTTCAGATTGAGAAA+AGG | + | chr1.1:24484468-24484487 | MS.gene84497:CDS | 30.0% |
| !! | TACATTAGAAGAGGGTATTT+AGG | - | chr1.1:24481404-24481423 | None:intergenic | 30.0% |
| !!! | CTTTTAAGGAGTATTATGAG+AGG | + | chr1.1:24484258-24484277 | MS.gene84497:CDS | 30.0% |
| !!! | CTTTTGATTTCATCGATTGT+TGG | - | chr1.1:24484083-24484102 | None:intergenic | 30.0% |
| !!! | TCAAAAGTGGAATTGGTTTT+GGG | + | chr1.1:24483513-24483532 | MS.gene84497:CDS | 30.0% |
| !!! | TGGTTTTGATGTTGCTTTTA+AGG | + | chr1.1:24484244-24484263 | MS.gene84497:CDS | 30.0% |
| AAACTTCAAACCCATTAGCA+TGG | + | chr1.1:24480648-24480667 | MS.gene84497:CDS | 35.0% | |
| AACTCCAACAGAAATTGTTG+AGG | + | chr1.1:24482637-24482656 | MS.gene84497:CDS | 35.0% | |
| AATTTCCGCGTTAATTCAAC+AGG | + | chr1.1:24483066-24483085 | MS.gene84497:intron | 35.0% | |
| ACGACACTACATAGTATGAT+TGG | + | chr1.1:24483722-24483741 | MS.gene84497:intron | 35.0% | |
| AGTCTTCCACAATGAAATTC+AGG | + | chr1.1:24482673-24482692 | MS.gene84497:CDS | 35.0% | |
| ATATGCTTCAGTTTACGGAT+AGG | - | chr1.1:24480963-24480982 | None:intergenic | 35.0% | |
| ATGAGTCACTTACTCAAAAG+TGG | + | chr1.1:24483500-24483519 | MS.gene84497:CDS | 35.0% | |
| ATTAACGCGGAAATTAGAGA+CGG | - | chr1.1:24483061-24483080 | None:intergenic | 35.0% | |
| ATTGTTAGCGACCAATATAG+CGG | - | chr1.1:24482814-24482833 | None:intergenic | 35.0% | |
| CAAACTGTTGTAATCAGCAA+TGG | - | chr1.1:24481904-24481923 | None:intergenic | 35.0% | |
| CACTTACTCAAAAGTGGAAT+TGG | + | chr1.1:24483506-24483525 | MS.gene84497:CDS | 35.0% | |
| GAAGAACCAAGAGAACTAAA+AGG | + | chr1.1:24483196-24483215 | MS.gene84497:CDS | 35.0% | |
| GAGTAAAGACATGTACATGT+TGG | - | chr1.1:24481138-24481157 | None:intergenic | 35.0% | |
| GCGTCAAAATATTGACCAAA+GGG | + | chr1.1:24483755-24483774 | MS.gene84497:intron | 35.0% | |
| GTTGTGAGAAATGTATACCT+TGG | - | chr1.1:24480807-24480826 | None:intergenic | 35.0% | |
| TATCATCACTCCATGCTAAT+GGG | - | chr1.1:24480661-24480680 | None:intergenic | 35.0% | |
| TATCATTTGTTTGGCAGACT+GGG | + | chr1.1:24480886-24480905 | MS.gene84497:intron | 35.0% | |
| TCATAGATTACCTCCAACAT+AGG | - | chr1.1:24481324-24481343 | None:intergenic | 35.0% | |
| TCGTAAGTACTTTGATTCCT+TGG | + | chr1.1:24482107-24482126 | MS.gene84497:intron | 35.0% | |
| TGCGTCAAAATATTGACCAA+AGG | + | chr1.1:24483754-24483773 | MS.gene84497:intron | 35.0% | |
| TGTTGAGTGTATTACTGAGT+TGG | + | chr1.1:24481944-24481963 | MS.gene84497:CDS | 35.0% | |
| TTATCATCACTCCATGCTAA+TGG | - | chr1.1:24480662-24480681 | None:intergenic | 35.0% | |
| TTCAAACTGTGGAAGAACAA+TGG | + | chr1.1:24484367-24484386 | MS.gene84497:CDS | 35.0% | |
| TTTATGTGTGTGCATATTGC+AGG | + | chr1.1:24482575-24482594 | MS.gene84497:intron | 35.0% | |
| ! | ATTGGTTCCCTCAGATTAAT+CGG | - | chr1.1:24481479-24481498 | None:intergenic | 35.0% |
| ! | CAAAGTCATGTGTCCATTTT+GGG | - | chr1.1:24483899-24483918 | None:intergenic | 35.0% |
| ! | CAAATTCAGCTTTGTGAAGT+AGG | - | chr1.1:24483276-24483295 | None:intergenic | 35.0% |
| ! | CATGTGTTGGTATTCATTTC+AGG | + | chr1.1:24483115-24483134 | MS.gene84497:CDS | 35.0% |
| ! | CATTGCTGATTACAACAGTT+TGG | + | chr1.1:24481902-24481921 | MS.gene84497:CDS | 35.0% |
| ! | CTATTACTGCATCAGCTTTT+CGG | - | chr1.1:24483959-24483978 | None:intergenic | 35.0% |
| ! | CTTTGCTCTTGCTTTAAATG+AGG | - | chr1.1:24481523-24481542 | None:intergenic | 35.0% |
| ! | GTAATAGAGCATTTCCACTT+CGG | + | chr1.1:24483972-24483991 | MS.gene84497:CDS | 35.0% |
| ! | TATTACTGCATCAGCTTTTC+GGG | - | chr1.1:24483958-24483977 | None:intergenic | 35.0% |
| ! | TTTTGTCTTCTTTTCCGAAG+TGG | - | chr1.1:24483989-24484008 | None:intergenic | 35.0% |
| !! | AGATTCCTGTTGCTGTTTAT+TGG | + | chr1.1:24482030-24482049 | MS.gene84497:CDS | 35.0% |
| !! | CTCAAAAGTGGAATTGGTTT+TGG | + | chr1.1:24483512-24483531 | MS.gene84497:CDS | 35.0% |
| !! | GATTCCTGTTGCTGTTTATT+GGG | + | chr1.1:24482031-24482050 | MS.gene84497:CDS | 35.0% |
| !! | GGTTTGAAGTTTTTCCTTGT+TGG | - | chr1.1:24480640-24480659 | None:intergenic | 35.0% |
| !!! | CTGTATCCTTTTAGTTCTCT+TGG | - | chr1.1:24483205-24483224 | None:intergenic | 35.0% |
| !!! | GAACTTTTTTCAGGGATGAT+AGG | + | chr1.1:24482320-24482339 | MS.gene84497:intron | 35.0% |
| AAAGAATCGTTCCTCGTTTC+TGG | + | chr1.1:24484006-24484025 | MS.gene84497:CDS | 40.0% | |
| AAGTACTCAACCACATACCA+TGG | - | chr1.1:24483319-24483338 | None:intergenic | 40.0% | |
| ACATTACTTGCAAGTGAAGC+TGG | - | chr1.1:24480605-24480624 | None:intergenic | 40.0% | |
| ACATTGTTGTCATGTGAGCA+TGG | - | chr1.1:24481704-24481723 | None:intergenic | 40.0% | |
| ACTTGAAGCTAGAAATGCCA+TGG | + | chr1.1:24483299-24483318 | MS.gene84497:CDS | 40.0% | |
| AGACTTGAATCTCCGCTAAA+AGG | + | chr1.1:24481261-24481280 | MS.gene84497:intron | 40.0% | |
| ATAGCCCAATAAACAGCAAC+AGG | - | chr1.1:24482038-24482057 | None:intergenic | 40.0% | |
| ATCAACCTTATTCCAGCCAA+GGG | - | chr1.1:24483346-24483365 | None:intergenic | 40.0% | |
| ATCAGCTGAAATCCCATACA+TGG | + | chr1.1:24481733-24481752 | MS.gene84497:CDS | 40.0% | |
| CTAAGGACCGATTAATCTGA+GGG | + | chr1.1:24481469-24481488 | MS.gene84497:intron | 40.0% | |
| GACTGAATTGTCCGCTATAT+TGG | + | chr1.1:24482800-24482819 | MS.gene84497:intron | 40.0% | |
| GCTAACCTGTTGAATTAACG+CGG | - | chr1.1:24483074-24483093 | None:intergenic | 40.0% | |
| GTATCATTTGTTTGGCAGAC+TGG | + | chr1.1:24480885-24480904 | MS.gene84497:intron | 40.0% | |
| GTGGACATGAGTTAGGTAAA+CGG | - | chr1.1:24480696-24480715 | None:intergenic | 40.0% | |
| GTTCAAGCCATCAAAGACAA+GGG | - | chr1.1:24482702-24482721 | None:intergenic | 40.0% | |
| GTTCTTCCACAGTTTGAATC+AGG | - | chr1.1:24484365-24484384 | None:intergenic | 40.0% | |
| TACTGTCCTGATTCAAACTG+TGG | + | chr1.1:24484356-24484375 | MS.gene84497:CDS | 40.0% | |
| TAGCAAAATCGGTTGCTAGA+GGG | + | chr1.1:24482912-24482931 | MS.gene84497:intron | 40.0% | |
| TATCAACCTTATTCCAGCCA+AGG | - | chr1.1:24483347-24483366 | None:intergenic | 40.0% | |
| TATGGGATTTCAGCTGATCA+AGG | - | chr1.1:24481731-24481750 | None:intergenic | 40.0% | |
| TCAAATGTATGCAACTGCTG+TGG | + | chr1.1:24484184-24484203 | MS.gene84497:CDS | 40.0% | |
| TCAGCTGAAATCCCATACAT+GGG | + | chr1.1:24481734-24481753 | MS.gene84497:CDS | 40.0% | |
| TCTAAGGACCGATTAATCTG+AGG | + | chr1.1:24481468-24481487 | MS.gene84497:intron | 40.0% | |
| TGATGGCTTGAACAGACAAA+TGG | + | chr1.1:24482709-24482728 | MS.gene84497:CDS | 40.0% | |
| TGCATATTAGCACAAGCAAC+AGG | - | chr1.1:24484299-24484318 | None:intergenic | 40.0% | |
| TGCTTGTGCTAATATGCAGT+TGG | + | chr1.1:24484301-24484320 | MS.gene84497:CDS | 40.0% | |
| TGTTCAAGCCATCAAAGACA+AGG | - | chr1.1:24482703-24482722 | None:intergenic | 40.0% | |
| TTCAAGCCATCAAAGACAAG+GGG | - | chr1.1:24482701-24482720 | None:intergenic | 40.0% | |
| ! | ACAAGGAGCAGAAAGCATAT+AGG | + | chr1.1:24482406-24482425 | MS.gene84497:CDS | 40.0% |
| ! | AGGTTAGCATCGAAGTGTTT+AGG | + | chr1.1:24483086-24483105 | MS.gene84497:intron | 40.0% |
| ! | GCAAAGTCATGTGTCCATTT+TGG | - | chr1.1:24483900-24483919 | None:intergenic | 40.0% |
| ! | TGCTTTTCCATCCCATGTAT+GGG | - | chr1.1:24481748-24481767 | None:intergenic | 40.0% |
| ! | TTAGCATCGAAGTGTTTAGG+AGG | + | chr1.1:24483089-24483108 | MS.gene84497:CDS | 40.0% |
| !! | GAAAAAGTGCTTGAGAAAGC+TGG | + | chr1.1:24484224-24484243 | MS.gene84497:CDS | 40.0% |
| !! | GTTTTGGGCTGAAATGAAGA+AGG | + | chr1.1:24483528-24483547 | MS.gene84497:CDS | 40.0% |
| !! | TTGCTTTTCCATCCCATGTA+TGG | - | chr1.1:24481749-24481768 | None:intergenic | 40.0% |
| !!! | CTGCTGTGGATTTTGAGATA+TGG | + | chr1.1:24484198-24484217 | MS.gene84497:CDS | 40.0% |
| AGGAGGCTCATAACCAGATA+AGG | - | chr1.1:24480943-24480962 | None:intergenic | 45.0% | |
| AGGGTCCAATCATCCACAAT+TGG | - | chr1.1:24483256-24483275 | None:intergenic | 45.0% | |
| AGTAAGTGACTCATCGTCTG+TGG | - | chr1.1:24483494-24483513 | None:intergenic | 45.0% | |
| ATGGAGGAACAGACCCAAAA+TGG | + | chr1.1:24483883-24483902 | MS.gene84497:CDS | 45.0% | |
| CACCTAGTTCAAACACCAAG+TGG | + | chr1.1:24481813-24481832 | MS.gene84497:CDS | 45.0% | |
| CAGGTGAGCTAGAAGATTAC+TGG | + | chr1.1:24482594-24482613 | MS.gene84497:intron | 45.0% | |
| CTGAAATCCCATACATGGGA+TGG | + | chr1.1:24481738-24481757 | MS.gene84497:CDS | 45.0% | |
| CTGTCTTCTACAAGACCTAC+AGG | - | chr1.1:24480915-24480934 | None:intergenic | 45.0% | |
| CTTACAAGGTCTTGGAGTCT+TGG | - | chr1.1:24483559-24483578 | None:intergenic | 45.0% | |
| CTTCTTCAATCCATCTACGC+TGG | + | chr1.1:24483166-24483185 | MS.gene84497:CDS | 45.0% | |
| GAAGACAGACTTCCCTTATC+TGG | + | chr1.1:24480927-24480946 | MS.gene84497:CDS | 45.0% | |
| GAGTTAGGTAAACGGTTTCG+AGG | - | chr1.1:24480688-24480707 | None:intergenic | 45.0% | |
| GATCTTGTGGATCCCAATTG+TGG | + | chr1.1:24483240-24483259 | MS.gene84497:CDS | 45.0% | |
| GCTAGAAATGCCATGGTATG+TGG | + | chr1.1:24483306-24483325 | MS.gene84497:CDS | 45.0% | |
| GGACCAAATGTGAAACTGCT+CGG | + | chr1.1:24484152-24484171 | MS.gene84497:CDS | 45.0% | |
| GGAGGCTCATAACCAGATAA+GGG | - | chr1.1:24480942-24480961 | None:intergenic | 45.0% | |
| GGATCCCAATTGTGGATGAT+TGG | + | chr1.1:24483248-24483267 | MS.gene84497:CDS | 45.0% | |
| GGGTCCAATCATCCACAATT+GGG | - | chr1.1:24483255-24483274 | None:intergenic | 45.0% | |
| GGGTTCAGAACAGGTAGAAT+TGG | - | chr1.1:24483397-24483416 | None:intergenic | 45.0% | |
| GGTTCACAATCCTACCTAGA+GGG | - | chr1.1:24483417-24483436 | None:intergenic | 45.0% | |
| GGTTGAGTACTTCTATCCCT+TGG | + | chr1.1:24483327-24483346 | MS.gene84497:CDS | 45.0% | |
| GGTTGGGTTCTACTAAGCAA+AGG | + | chr1.1:24484131-24484150 | MS.gene84497:CDS | 45.0% | |
| GTAAGTGACTCATCGTCTGT+GGG | - | chr1.1:24483493-24483512 | None:intergenic | 45.0% | |
| GTAGCAAAATCGGTTGCTAG+AGG | + | chr1.1:24482911-24482930 | MS.gene84497:intron | 45.0% | |
| GTGAGCTAGAAGATTACTGG+AGG | + | chr1.1:24482597-24482616 | MS.gene84497:CDS | 45.0% | |
| GTGTCAGCTTATAGCCAACA+AGG | + | chr1.1:24480623-24480642 | MS.gene84497:CDS | 45.0% | |
| TACCTAACTCATGTCCACAC+CGG | + | chr1.1:24480698-24480717 | MS.gene84497:CDS | 45.0% | |
| TAGATGATGAGCACACTTCC+TGG | + | chr1.1:24481672-24481691 | MS.gene84497:intron | 45.0% | |
| TCAAGCCATCAAAGACAAGG+GGG | - | chr1.1:24482700-24482719 | None:intergenic | 45.0% | |
| TCTATCCCTTGGCTGGAATA+AGG | + | chr1.1:24483338-24483357 | MS.gene84497:CDS | 45.0% | |
| TCTATGCCAATCCAGAAACG+AGG | - | chr1.1:24484020-24484039 | None:intergenic | 45.0% | |
| TCTCGTCTCTTATGCTGTCT+AGG | - | chr1.1:24483141-24483160 | None:intergenic | 45.0% | |
| TGCATAGCTTCAGACAAAGC+AGG | - | chr1.1:24482008-24482027 | None:intergenic | 45.0% | |
| TGCTTCAGTTTACGGATAGG+AGG | - | chr1.1:24480960-24480979 | None:intergenic | 45.0% | |
| TGGTTCACAATCCTACCTAG+AGG | - | chr1.1:24483418-24483437 | None:intergenic | 45.0% | |
| TTCCACATCGTACCTTTCAC+CGG | - | chr1.1:24480720-24480739 | None:intergenic | 45.0% | |
| TTCTTGTAGTCCAGCGTAGA+TGG | - | chr1.1:24483179-24483198 | None:intergenic | 45.0% | |
| TTGCTTAGTAGAACCCAACC+TGG | - | chr1.1:24484131-24484150 | None:intergenic | 45.0% | |
| ! | AAGATTACTGGAGGCGTAAG+AGG | + | chr1.1:24482606-24482625 | MS.gene84497:CDS | 45.0% |
| ! | ACTGAAGCATATTTCTGCCC+AGG | + | chr1.1:24480971-24480990 | MS.gene84497:CDS | 45.0% |
| ! | AGATTACTGGAGGCGTAAGA+GGG | + | chr1.1:24482607-24482626 | MS.gene84497:CDS | 45.0% |
| ! | ATCGTTCCTCGTTTCTGGAT+TGG | + | chr1.1:24484011-24484030 | MS.gene84497:CDS | 45.0% |
| ! | GTTAGCTACAAGTGTTGCCA+TGG | + | chr1.1:24484401-24484420 | MS.gene84497:CDS | 45.0% |
| ! | GTTTAGGAGGAAGCATGTGT+TGG | + | chr1.1:24483102-24483121 | MS.gene84497:CDS | 45.0% |
| !! | CACCACTTGGTGTTTGAACT+AGG | - | chr1.1:24481818-24481837 | None:intergenic | 45.0% |
| !! | TAATATCATTAATTATATAT+CGG | - | chr1.1:24482211-24482230 | None:intergenic | 5.0% |
| AACACTATCAGCGACTGCAC+TGG | - | chr1.1:24480780-24480799 | None:intergenic | 50.0% | |
| AATGTGAAACTGCTCGGTCG+CGG | + | chr1.1:24484158-24484177 | MS.gene84497:CDS | 50.0% | |
| ACACCAAGTGGTGACTCACT+TGG | + | chr1.1:24481825-24481844 | MS.gene84497:CDS | 50.0% | |
| CAAACAAGACCAGCCAGGTT+GGG | + | chr1.1:24484115-24484134 | MS.gene84497:CDS | 50.0% | |
| CATCGTCTGTGGGACGAAAA+GGG | - | chr1.1:24483483-24483502 | None:intergenic | 50.0% | |
| CGACCGAGCAGTTTCACATT+TGG | - | chr1.1:24484158-24484177 | None:intergenic | 50.0% | |
| CGTTCTCGTGAGTATGACCA+TGG | - | chr1.1:24484421-24484440 | None:intergenic | 50.0% | |
| CTACCTAGAGGGTTCAGAAC+AGG | - | chr1.1:24483406-24483425 | None:intergenic | 50.0% | |
| CTTCCAAGTGAGTCACCACT+TGG | - | chr1.1:24481831-24481850 | None:intergenic | 50.0% | |
| GAGTACTTCTATCCCTTGGC+TGG | + | chr1.1:24483331-24483350 | MS.gene84497:CDS | 50.0% | |
| GGGGGTCCTGAATTTCATTG+TGG | - | chr1.1:24482682-24482701 | None:intergenic | 50.0% | |
| TCAAACAAGACCAGCCAGGT+TGG | + | chr1.1:24484114-24484133 | MS.gene84497:CDS | 50.0% | |
| TCATCGTCTGTGGGACGAAA+AGG | - | chr1.1:24483484-24483503 | None:intergenic | 50.0% | |
| TGTCTCAAACAAGACCAGCC+AGG | + | chr1.1:24484110-24484129 | MS.gene84497:CDS | 50.0% | |
| TTAAATGAGGCCTCCGCAAG+TGG | - | chr1.1:24481510-24481529 | None:intergenic | 50.0% | |
| TTAGTAGAACCCAACCTGGC+TGG | - | chr1.1:24484127-24484146 | None:intergenic | 50.0% | |
| ! | CGCTGATAGTGTTGCATCCA+AGG | + | chr1.1:24480787-24480806 | MS.gene84497:CDS | 50.0% |
| ! | CTACCTGTTCTGAACCCTCT+AGG | + | chr1.1:24483400-24483419 | MS.gene84497:CDS | 50.0% |
| ! | CTGTTCTGAACCCTCTAGGT+AGG | + | chr1.1:24483404-24483423 | MS.gene84497:CDS | 50.0% |
| ACAAAACCACCACCCTCAGC+AGG | - | chr1.1:24484455-24484474 | None:intergenic | 55.0% | |
| ATGTGAGCATGGTGCTCACC+AGG | - | chr1.1:24481693-24481712 | None:intergenic | 55.0% | |
| CACCGGTGTGGACATGAGTT+AGG | - | chr1.1:24480703-24480722 | None:intergenic | 55.0% | |
| CAGGACCCCCTTGTCTTTGA+TGG | + | chr1.1:24482692-24482711 | MS.gene84497:CDS | 55.0% | |
| CATCGTACCTTTCACCGGTG+TGG | - | chr1.1:24480715-24480734 | None:intergenic | 55.0% | |
| CTCATGTCCACACCGGTGAA+AGG | + | chr1.1:24480705-24480724 | MS.gene84497:CDS | 55.0% | |
| GTCTGTGGGACGAAAAGGGA+AGG | - | chr1.1:24483479-24483498 | None:intergenic | 55.0% | |
| ! | CACCGGTGAAAGGTACGATG+TGG | + | chr1.1:24480715-24480734 | MS.gene84497:CDS | 55.0% |
| AAACCACCACCCTCAGCAGG+AGG | - | chr1.1:24484452-24484471 | None:intergenic | 60.0% | |
| ATGAGGCCTCCGCAAGTGGA+CGG | - | chr1.1:24481506-24481525 | None:intergenic | 60.0% | |
| CCAATCCCACCGTCCACTTG+CGG | + | chr1.1:24481494-24481513 | MS.gene84497:intron | 60.0% | |
| GCTGAAGCTCCTCCTGCTGA+GGG | + | chr1.1:24484440-24484459 | MS.gene84497:CDS | 60.0% | |
| TGGCAGACTGGGACTCCTGT+AGG | + | chr1.1:24480897-24480916 | MS.gene84497:intron | 60.0% | |
| ATCCCACCGTCCACTTGCGG+AGG | + | chr1.1:24481497-24481516 | MS.gene84497:intron | 65.0% | |
| CCGCAAGTGGACGGTGGGAT+TGG | - | chr1.1:24481497-24481516 | None:intergenic | 65.0% | |
| CGCTGAAGCTCCTCCTGCTG+AGG | + | chr1.1:24484439-24484458 | MS.gene84497:CDS | 65.0% | |
| GAAGCTCCTCCTGCTGAGGG+TGG | + | chr1.1:24484443-24484462 | MS.gene84497:CDS | 65.0% | |
| AGGCCTCCGCAAGTGGACGG+TGG | - | chr1.1:24481503-24481522 | None:intergenic | 70.0% | |
| GCTCCTCCTGCTGAGGGTGG+TGG | + | chr1.1:24484446-24484465 | MS.gene84497:CDS | 70.0% | |
| GGCCTCCGCAAGTGGACGGT+GGG | - | chr1.1:24481502-24481521 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 24480584 | 24484496 | 24480584 | ID=MS.gene84497 |
| chr1.1 | mRNA | 24480584 | 24484496 | 24480584 | ID=MS.gene84497.t1;Parent=MS.gene84497 |
| chr1.1 | exon | 24480584 | 24480808 | 24480584 | ID=MS.gene84497.t1.exon1;Parent=MS.gene84497.t1 |
| chr1.1 | CDS | 24480584 | 24480808 | 24480584 | ID=cds.MS.gene84497.t1;Parent=MS.gene84497.t1 |
| chr1.1 | exon | 24480903 | 24480992 | 24480903 | ID=MS.gene84497.t1.exon2;Parent=MS.gene84497.t1 |
| chr1.1 | CDS | 24480903 | 24480992 | 24480903 | ID=cds.MS.gene84497.t1;Parent=MS.gene84497.t1 |
| chr1.1 | exon | 24481675 | 24482108 | 24481675 | ID=MS.gene84497.t1.exon3;Parent=MS.gene84497.t1 |
| chr1.1 | CDS | 24481675 | 24482108 | 24481675 | ID=cds.MS.gene84497.t1;Parent=MS.gene84497.t1 |
| chr1.1 | exon | 24482333 | 24482427 | 24482333 | ID=MS.gene84497.t1.exon4;Parent=MS.gene84497.t1 |
| chr1.1 | CDS | 24482333 | 24482427 | 24482333 | ID=cds.MS.gene84497.t1;Parent=MS.gene84497.t1 |
| chr1.1 | exon | 24482597 | 24482730 | 24482597 | ID=MS.gene84497.t1.exon5;Parent=MS.gene84497.t1 |
| chr1.1 | CDS | 24482597 | 24482730 | 24482597 | ID=cds.MS.gene84497.t1;Parent=MS.gene84497.t1 |
| chr1.1 | exon | 24483088 | 24483573 | 24483088 | ID=MS.gene84497.t1.exon6;Parent=MS.gene84497.t1 |
| chr1.1 | CDS | 24483088 | 24483573 | 24483088 | ID=cds.MS.gene84497.t1;Parent=MS.gene84497.t1 |
| chr1.1 | exon | 24483855 | 24484496 | 24483855 | ID=MS.gene84497.t1.exon7;Parent=MS.gene84497.t1 |
| chr1.1 | CDS | 24483855 | 24484496 | 24483855 | ID=cds.MS.gene84497.t1;Parent=MS.gene84497.t1 |
| Gene Sequence |
| Protein sequence |
