Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71460.t1 | XP_003590780.1 | 85.5 | 676 | 96 | 2 | 1 | 675 | 1 | 675 | 0.00E+00 | 1190.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71460.t1 | Q9SS87 | 23.6 | 707 | 447 | 24 | 36 | 666 | 39 | 728 | 1.4e-45 | 186.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71460.t1 | E2FKJ1 | 85.5 | 676 | 96 | 2 | 1 | 675 | 1 | 675 | 0.0e+00 | 1190.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049302 | MS.gene71460 | 0.814316 | 1.64E-51 | -1.69E-46 |
| MS.gene049418 | MS.gene71460 | 0.863137 | 3.09E-64 | -1.69E-46 |
| MS.gene049698 | MS.gene71460 | 0.823946 | 1.05E-53 | -1.69E-46 |
| MS.gene049989 | MS.gene71460 | 0.818261 | 2.15E-52 | -1.69E-46 |
| MS.gene05017 | MS.gene71460 | 0.833982 | 3.90E-56 | -1.69E-46 |
| MS.gene050297 | MS.gene71460 | 0.821961 | 3.06E-53 | -1.69E-46 |
| MS.gene050310 | MS.gene71460 | 0.827871 | 1.23E-54 | -1.69E-46 |
| MS.gene051067 | MS.gene71460 | 0.856599 | 2.88E-62 | -1.69E-46 |
| MS.gene051263 | MS.gene71460 | 0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene71460 | 0.855451 | 6.25E-62 | -1.69E-46 |
| MS.gene053536 | MS.gene71460 | 0.816484 | 5.40E-52 | -1.69E-46 |
| MS.gene053538 | MS.gene71460 | 0.813805 | 2.13E-51 | -1.69E-46 |
| MS.gene054118 | MS.gene71460 | 0.867688 | 1.14E-65 | -1.69E-46 |
| MS.gene054584 | MS.gene71460 | 0.803566 | 3.28E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene71460 | 0.809863 | 1.53E-50 | -1.69E-46 |
| MS.gene055764 | MS.gene71460 | 0.802992 | 4.31E-49 | -1.69E-46 |
| MS.gene056228 | MS.gene71460 | 0.810842 | 9.43E-51 | -1.69E-46 |
| MS.gene056520 | MS.gene71460 | 0.830458 | 2.90E-55 | -1.69E-46 |
| MS.gene057082 | MS.gene71460 | 0.80545 | 1.33E-49 | -1.69E-46 |
| MS.gene05709 | MS.gene71460 | 0.803497 | 3.39E-49 | -1.69E-46 |
| MS.gene058197 | MS.gene71460 | 0.822226 | 2.65E-53 | -1.69E-46 |
| MS.gene058198 | MS.gene71460 | 0.822139 | 2.78E-53 | -1.69E-46 |
| MS.gene058823 | MS.gene71460 | 0.816878 | 4.41E-52 | -1.69E-46 |
| MS.gene058909 | MS.gene71460 | 0.886148 | 4.40E-72 | -1.69E-46 |
| MS.gene058912 | MS.gene71460 | 0.883782 | 3.35E-71 | -1.69E-46 |
| MS.gene05894 | MS.gene71460 | 0.818409 | 1.99E-52 | -1.69E-46 |
| MS.gene059300 | MS.gene71460 | 0.845477 | 3.96E-59 | -1.69E-46 |
| MS.gene059424 | MS.gene71460 | 0.808037 | 3.77E-50 | -1.69E-46 |
| MS.gene060547 | MS.gene71460 | 0.813755 | 2.18E-51 | -1.69E-46 |
| MS.gene06057 | MS.gene71460 | 0.822081 | 2.87E-53 | -1.69E-46 |
| MS.gene060825 | MS.gene71460 | 0.805956 | 1.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71460.t1 | MTR_1g075170 | 86.243 | 676 | 91 | 2 | 1 | 675 | 1 | 675 | 0.0 | 1208 |
| MS.gene71460.t1 | MTR_1g075153 | 53.304 | 681 | 297 | 9 | 3 | 675 | 4 | 671 | 0.0 | 718 |
| MS.gene71460.t1 | MTR_1g075180 | 51.613 | 651 | 288 | 12 | 27 | 669 | 7 | 638 | 0.0 | 651 |
| MS.gene71460.t1 | MTR_1g040360 | 43.111 | 675 | 347 | 13 | 19 | 666 | 13 | 677 | 1.76e-170 | 504 |
| MS.gene71460.t1 | MTR_1g074990 | 31.352 | 673 | 399 | 19 | 31 | 669 | 20 | 663 | 1.05e-98 | 317 |
| MS.gene71460.t1 | MTR_1g074950 | 32.936 | 671 | 386 | 21 | 31 | 666 | 21 | 662 | 9.88e-98 | 315 |
| MS.gene71460.t1 | MTR_1g075095 | 29.762 | 672 | 407 | 17 | 31 | 666 | 20 | 662 | 1.34e-89 | 293 |
| MS.gene71460.t1 | MTR_1g075030 | 29.525 | 674 | 406 | 19 | 31 | 666 | 20 | 662 | 1.47e-89 | 293 |
| MS.gene71460.t1 | MTR_1g075230 | 30.045 | 669 | 415 | 19 | 31 | 669 | 20 | 665 | 1.95e-86 | 285 |
| MS.gene71460.t1 | MTR_7g032660 | 26.220 | 717 | 430 | 26 | 29 | 669 | 20 | 713 | 4.41e-53 | 195 |
| MS.gene71460.t1 | MTR_3g075450 | 26.591 | 707 | 411 | 30 | 36 | 665 | 29 | 704 | 3.88e-49 | 183 |
| MS.gene71460.t1 | MTR_8g089660 | 24.162 | 716 | 427 | 30 | 36 | 667 | 21 | 704 | 1.62e-41 | 161 |
| MS.gene71460.t1 | MTR_8g063020 | 35.135 | 222 | 121 | 6 | 81 | 301 | 29 | 228 | 1.05e-25 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71460.t1 | AT3G01680 | 24.789 | 710 | 435 | 30 | 36 | 666 | 39 | 728 | 5.64e-48 | 181 |
| MS.gene71460.t1 | AT3G01670 | 22.329 | 730 | 420 | 21 | 36 | 665 | 138 | 820 | 1.27e-35 | 144 |
| MS.gene71460.t1 | AT3G01670 | 22.329 | 730 | 420 | 21 | 36 | 665 | 162 | 844 | 1.75e-35 | 144 |
| MS.gene71460.t1 | AT1G67790 | 20.486 | 659 | 449 | 23 | 40 | 646 | 15 | 650 | 5.70e-18 | 88.6 |
Find 129 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCTTGTCACATTCTTAT+TGG | 0.136620 | 1.3:+53682160 | MS.gene71460:CDS |
| CAATTGCTCTTGTGAATTCT+TGG | 0.155564 | 1.3:-53686089 | None:intergenic |
| CTTGGGAGGTACCATTCTTT+TGG | 0.182584 | 1.3:-53681342 | None:intergenic |
| ATCAATATCGTCAAGCTTAA+AGG | 0.190937 | 1.3:-53681389 | None:intergenic |
| CAACAAAGATTCCATACTTT+TGG | 0.213846 | 1.3:+53686187 | MS.gene71460:CDS |
| AATCAAATGCAGCAACTATT+TGG | 0.224197 | 1.3:-53686609 | None:intergenic |
| GGATTCCCATTGTGGATAAT+TGG | 0.226633 | 1.3:+53684457 | MS.gene71460:CDS |
| GTGCAATTATGTATCTTAAT+AGG | 0.245870 | 1.3:+53682057 | MS.gene71460:CDS |
| TCAAGAAATGGGAATGGTTT+TGG | 0.249117 | 1.3:+53684994 | MS.gene71460:CDS |
| GCCATTGATTGGTACATCTT+TGG | 0.251729 | 1.3:-53681311 | None:intergenic |
| GAAAGTTGCAAAGTGGAAAT+TGG | 0.271554 | 1.3:+53682510 | MS.gene71460:CDS |
| TCTGCCTCAACTCAGATTTC+TGG | 0.271962 | 1.3:+53681499 | MS.gene71460:CDS |
| AACTCTAGCTGCATTCTCTT+TGG | 0.285355 | 1.3:+53682028 | MS.gene71460:CDS |
| CAAATACCACCAATATTTAT+AGG | 0.291356 | 1.3:+53682738 | MS.gene71460:CDS |
| GCTGCATTCTCTTTGGAGTA+TGG | 0.291746 | 1.3:+53682035 | MS.gene71460:CDS |
| TCAGCATCACTTATCCTAAA+AGG | 0.301931 | 1.3:-53684963 | None:intergenic |
| TGAATTCTTGGACCCACTTT+GGG | 0.322793 | 1.3:-53686077 | None:intergenic |
| TCTATACCCATCCAAAAGTA+TGG | 0.327507 | 1.3:-53686198 | None:intergenic |
| GGAGCTGAGATTTCTGTTCT+TGG | 0.330206 | 1.3:-53681360 | None:intergenic |
| CTGAAGATATCTTCAAGAAA+TGG | 0.331332 | 1.3:+53684982 | MS.gene71460:CDS |
| AAACCACAAGAAGTGATAAA+AGG | 0.343304 | 1.3:+53684405 | MS.gene71460:CDS |
| TCGTCAAGCTTAAAGGGATT+AGG | 0.343557 | 1.3:-53681382 | None:intergenic |
| TAACGAGTTGAGGCCTCATT+TGG | 0.343868 | 1.3:+53682488 | MS.gene71460:CDS |
| GGGTTGATCACTGCGAAAAT+AGG | 0.358665 | 1.3:-53684876 | None:intergenic |
| CAAAAGTATGGAATCTTTGT+TGG | 0.360918 | 1.3:-53686186 | None:intergenic |
| CCTGAAGAGGATTTCTTGTC+AGG | 0.368222 | 1.3:+53681689 | MS.gene71460:CDS |
| CAAGGAAAATTATCTTTGAA+TGG | 0.376940 | 1.3:+53684925 | MS.gene71460:CDS |
| GAGCTGAGATTTCTGTTCTT+GGG | 0.379012 | 1.3:-53681359 | None:intergenic |
| CGTCAAGCTTAAAGGGATTA+GGG | 0.380837 | 1.3:-53681381 | None:intergenic |
| GGATTCCTCTTGTTGTGTAT+TGG | 0.381172 | 1.3:+53682273 | MS.gene71460:CDS |
| CAAGAATTCACAAGAGCAAT+TGG | 0.389274 | 1.3:+53686090 | MS.gene71460:CDS |
| GTGAATTCTTGGACCCACTT+TGG | 0.399763 | 1.3:-53686078 | None:intergenic |
| AAGGAAAATTATCTTTGAAT+GGG | 0.400095 | 1.3:+53684926 | MS.gene71460:CDS |
| TGGGCAGCATGGTCTGCTTT+CGG | 0.406610 | 1.3:+53682206 | MS.gene71460:CDS |
| ACACGTCCACAAGTAGGATT+TGG | 0.408497 | 1.3:-53686540 | None:intergenic |
| ATCACCTCAGAGACTTCTCC+TGG | 0.410904 | 1.3:+53681988 | MS.gene71460:CDS |
| GATAGATACATATTCATCTA+TGG | 0.412586 | 1.3:+53686045 | MS.gene71460:CDS |
| AGGCAACAACCAAGTTAAAC+AGG | 0.412902 | 1.3:+53682758 | MS.gene71460:CDS |
| CTATGATTCAGGGCATGAAA+TGG | 0.422094 | 1.3:+53686022 | MS.gene71460:intron |
| TGGTTGTTGCCTATAAATAT+TGG | 0.423025 | 1.3:-53682747 | None:intergenic |
| CAGCACTAACCTGTTTAACT+TGG | 0.423065 | 1.3:-53682767 | None:intergenic |
| CCTGACAAGAAATCCTCTTC+AGG | 0.423986 | 1.3:-53681689 | None:intergenic |
| TGGGTCGTAGTGCCATTGAT+TGG | 0.424583 | 1.3:-53681322 | None:intergenic |
| AAAAGTATGGAATCTTTGTT+GGG | 0.425612 | 1.3:-53686185 | None:intergenic |
| GTCTGCTTTCGGTTATGACT+TGG | 0.426387 | 1.3:+53682217 | MS.gene71460:CDS |
| GGGTGATATAAACTTTGTTA+AGG | 0.430161 | 1.3:-53681414 | None:intergenic |
| TCAATATCGTCAAGCTTAAA+GGG | 0.433331 | 1.3:-53681388 | None:intergenic |
| TTTAAATAAAAGGTATGTGT+TGG | 0.439529 | 1.3:+53684785 | MS.gene71460:intron |
| GATAAAAGGTTTCAAGAAAG+AGG | 0.440536 | 1.3:+53684419 | MS.gene71460:CDS |
| TGAAGATATCTTCAAGAAAT+GGG | 0.441441 | 1.3:+53684983 | MS.gene71460:CDS |
| CTCTTCAGGACAGAGAAGTC+TGG | 0.466217 | 1.3:-53681675 | None:intergenic |
| CACCCATGTCAAAGATTATG+AGG | 0.466569 | 1.3:+53681432 | MS.gene71460:CDS |
| GATTCCCATTGTGGATAATT+GGG | 0.467568 | 1.3:+53684458 | MS.gene71460:CDS |
| TTCTCTGAGCTACCAGGGCG+TGG | 0.475211 | 1.3:+53684813 | MS.gene71460:CDS |
| ATTTCGAGATTAGACAGCAT+TGG | 0.478991 | 1.3:+53684336 | MS.gene71460:CDS |
| GCTACCATTGTTGCATGTAC+TGG | 0.479451 | 1.3:+53682302 | MS.gene71460:CDS |
| TCAGCCACAGTTTGATACAT+AGG | 0.485178 | 1.3:-53686372 | None:intergenic |
| CATTCATTATAACACCTTGA+GGG | 0.485580 | 1.3:-53684896 | None:intergenic |
| TGTTGGAGACAAGCTTGAAA+AGG | 0.489275 | 1.3:-53681471 | None:intergenic |
| ATTTGAAAGAAAGCATGAAA+TGG | 0.489829 | 1.3:+53684508 | MS.gene71460:CDS |
| TTCTTGAGACTTCTGATCAA+AGG | 0.489932 | 1.3:+53682702 | MS.gene71460:CDS |
| TATGATTCAGGGCATGAAAT+GGG | 0.490425 | 1.3:+53686023 | MS.gene71460:intron |
| TGCACATTCTGCTGTGCCGC+GGG | 0.492853 | 1.3:-53681940 | None:intergenic |
| GAACCTTTCTGAATTGAACT+TGG | 0.497414 | 1.3:-53682124 | None:intergenic |
| ACTTTGCAACTTTCCAAATG+AGG | 0.497491 | 1.3:-53682501 | None:intergenic |
| TCATCCCAATTATCCACAAT+GGG | 0.497534 | 1.3:-53684462 | None:intergenic |
| GGAATCCATTGCATAGCATC+AGG | 0.501216 | 1.3:-53682257 | None:intergenic |
| TCCAAAGATGTACCAATCAA+TGG | 0.506446 | 1.3:+53681310 | MS.gene71460:CDS |
| AGGAGAAGTCTCTGAGGTGA+TGG | 0.514175 | 1.3:-53681986 | None:intergenic |
| TGTCTCAAACAAGACCCATC+AGG | 0.516882 | 1.3:+53686297 | MS.gene71460:CDS |
| TAGCCAAGTTCAATTCAGAA+AGG | 0.519066 | 1.3:+53682121 | MS.gene71460:CDS |
| GGAGAATCCACATTGTTGTC+TGG | 0.519858 | 1.3:-53681965 | None:intergenic |
| TTCTTTATTATCCCACGCCC+TGG | 0.524143 | 1.3:-53684825 | None:intergenic |
| GAACACTTCTCTGAGCTACC+AGG | 0.528519 | 1.3:+53684807 | MS.gene71460:CDS |
| GAAAGTAGATATCAATATTG+AGG | 0.532242 | 1.3:+53685028 | MS.gene71460:CDS |
| AGTTGAGGCAGAGAGGATGT+TGG | 0.533320 | 1.3:-53681488 | None:intergenic |
| ACAAGATCAGTTATATCAGC+AGG | 0.534782 | 1.3:-53682146 | None:intergenic |
| GGCACTACGACCCAAAAGAA+TGG | 0.536228 | 1.3:+53681331 | MS.gene71460:CDS |
| TCCTACTTGTGGACGTGTGA+TGG | 0.538034 | 1.3:+53686545 | MS.gene71460:CDS |
| CTGAGATTTCTGTTCTTGGG+AGG | 0.538881 | 1.3:-53681356 | None:intergenic |
| CAGACTTCTCTGTCCTGAAG+AGG | 0.553925 | 1.3:+53681676 | MS.gene71460:CDS |
| GTTGGAGACAAGCTTGAAAA+GGG | 0.555938 | 1.3:-53681470 | None:intergenic |
| AGACTTCTGATCAAAGGCAA+TGG | 0.558021 | 1.3:+53682708 | MS.gene71460:CDS |
| TTCCTCATAATCTTTGACAT+GGG | 0.560884 | 1.3:-53681434 | None:intergenic |
| GACATTGATTACCACCAACT+AGG | 0.560987 | 1.3:+53686153 | MS.gene71460:CDS |
| ATTCCTCATAATCTTTGACA+TGG | 0.565424 | 1.3:-53681435 | None:intergenic |
| TTCATCCCAATTATCCACAA+TGG | 0.566307 | 1.3:-53684463 | None:intergenic |
| AGGAAAATTATCTTTGAATG+GGG | 0.566944 | 1.3:+53684927 | MS.gene71460:CDS |
| TCATTCATTATAACACCTTG+AGG | 0.567246 | 1.3:-53684897 | None:intergenic |
| CATAGAAGAACCCATCCTGA+TGG | 0.572952 | 1.3:-53686312 | None:intergenic |
| TTATAATGAATGAGAATGCA+AGG | 0.574786 | 1.3:+53684907 | MS.gene71460:CDS |
| TTGTTGCCTATAAATATTGG+TGG | 0.577295 | 1.3:-53682744 | None:intergenic |
| GTGCACATTCTGCTGTGCCG+CGG | 0.581489 | 1.3:-53681941 | None:intergenic |
| CTTTGCCTGATGCTATGCAA+TGG | 0.584464 | 1.3:+53682252 | MS.gene71460:CDS |
| ACTGTCCAATACACAACAAG+AGG | 0.585978 | 1.3:-53682278 | None:intergenic |
| GATGGGTTCTTCTATGTAGA+GGG | 0.587378 | 1.3:+53686319 | MS.gene71460:CDS |
| TCAAACAAGACCCATCAGGA+TGG | 0.588487 | 1.3:+53686301 | MS.gene71460:CDS |
| ATGTGGTGGTTAACGAGTTG+AGG | 0.588601 | 1.3:+53682478 | MS.gene71460:CDS |
| ATAGAAGAACCCATCCTGAT+GGG | 0.589255 | 1.3:-53686311 | None:intergenic |
| GGATGGGTTCTTCTATGTAG+AGG | 0.593679 | 1.3:+53686318 | MS.gene71460:CDS |
| ATATCTTCAAGAAATGGGAA+TGG | 0.602647 | 1.3:+53684988 | MS.gene71460:CDS |
| ACTTGTCCAAATCCTACTTG+TGG | 0.603163 | 1.3:+53686534 | MS.gene71460:CDS |
| CAAACAAGACCCATCAGGAT+GGG | 0.603374 | 1.3:+53686302 | MS.gene71460:CDS |
| ATGGAGGCAACGACCCAAAG+TGG | 0.604064 | 1.3:+53686064 | MS.gene71460:CDS |
| AGTTCCAGAAATCTGAGTTG+AGG | 0.604866 | 1.3:-53681503 | None:intergenic |
| TACATCTTTGGACAATGCAG+TGG | 0.608358 | 1.3:-53681299 | None:intergenic |
| GTTAGAAGACATTAAACAGT+GGG | 0.609402 | 1.3:+53682187 | MS.gene71460:CDS |
| ACATTAAACAGTGGGCAGCA+TGG | 0.610506 | 1.3:+53682195 | MS.gene71460:CDS |
| ATTCAATCATCAGACACACT+TGG | 0.616321 | 1.3:+53682080 | MS.gene71460:CDS |
| TTTGGACAATGCAGTGGACA+TGG | 0.617395 | 1.3:-53681293 | None:intergenic |
| TCATTTGGAAAGTTGCAAAG+TGG | 0.618816 | 1.3:+53682503 | MS.gene71460:CDS |
| GCATGTACTGGTAACCTCGT+CGG | 0.621064 | 1.3:+53682314 | MS.gene71460:CDS |
| TCTCTGAGCTACCAGGGCGT+GGG | 0.623157 | 1.3:+53684814 | MS.gene71460:CDS |
| AAATCTGAGTTGAGGCAGAG+AGG | 0.625519 | 1.3:-53681495 | None:intergenic |
| TGGAGGCAACGACCCAAAGT+GGG | 0.636550 | 1.3:+53686065 | MS.gene71460:CDS |
| TCACCTCAGAGACTTCTCCT+GGG | 0.638066 | 1.3:+53681989 | MS.gene71460:CDS |
| TTCGCAGTGATCAACCCTCA+AGG | 0.640109 | 1.3:+53684882 | MS.gene71460:CDS |
| AGATACATATTCATCTATGG+AGG | 0.642307 | 1.3:+53686048 | MS.gene71460:CDS |
| TCCATCACACGTCCACAAGT+AGG | 0.659029 | 1.3:-53686546 | None:intergenic |
| GTTACCAGTACATGCAACAA+TGG | 0.666126 | 1.3:-53682306 | None:intergenic |
| CTTCCCAGGAGAAGTCTCTG+AGG | 0.675866 | 1.3:-53681992 | None:intergenic |
| AACTATTTGGATCATCACGA+TGG | 0.682485 | 1.3:-53686596 | None:intergenic |
| TACTTGTGGACGTGTGATGG+AGG | 0.687419 | 1.3:+53686548 | MS.gene71460:CDS |
| AACACTTCTCTGAGCTACCA+GGG | 0.697242 | 1.3:+53684808 | MS.gene71460:CDS |
| TGTTAGAAGACATTAAACAG+TGG | 0.705202 | 1.3:+53682186 | MS.gene71460:CDS |
| TGACAGATGATAACGACCCG+CGG | 0.734185 | 1.3:+53681924 | MS.gene71460:intron |
| TGAACCTATGTATCAAACTG+TGG | 0.735680 | 1.3:+53686368 | MS.gene71460:CDS |
| GTGCACACCAGACAACAATG+TGG | 0.739193 | 1.3:+53681958 | MS.gene71460:CDS |
| GAACTTACGATATACCGACG+AGG | 0.806189 | 1.3:-53682328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATCAGATTATAAAAAA+AGG | + | chr1.3:53682448-53682467 | MS.gene71460:CDS | 10.0% |
| !!! | CTTTTTTTTTTAAAGAATTT+AGG | + | chr1.3:53685223-53685242 | MS.gene71460:intron | 10.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | + | chr1.3:53682935-53682954 | MS.gene71460:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr1.3:53682983-53683002 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr1.3:53682984-53683003 | None:intergenic | 10.0% |
| !! | AAAAAACTGAATTATGATAT+TGG | + | chr1.3:53684846-53684865 | MS.gene71460:CDS | 15.0% |
| !! | AGTATATGAAGAAAAAAATT+GGG | - | chr1.3:53684040-53684059 | None:intergenic | 15.0% |
| !! | TAAAAGATAACATAGTAAAA+GGG | - | chr1.3:53684250-53684269 | None:intergenic | 15.0% |
| !! | TAGTATATGAAGAAAAAAAT+TGG | - | chr1.3:53684041-53684060 | None:intergenic | 15.0% |
| !! | TATTAAAATGTATAAGTGAA+AGG | - | chr1.3:53681556-53681575 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr1.3:53683269-53683288 | MS.gene71460:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr1.3:53682907-53682926 | None:intergenic | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr1.3:53682869-53682888 | MS.gene71460:intron | 15.0% |
| !!! | TTTTATTAATCTGTATGAAA+TGG | + | chr1.3:53681842-53681861 | MS.gene71460:intron | 15.0% |
| !! | AAACTCTTTGAATTAATACT+CGG | + | chr1.3:53682831-53682850 | MS.gene71460:intron | 20.0% |
| !! | AAATTATCCTTATTAACAGA+TGG | - | chr1.3:53681786-53681805 | None:intergenic | 20.0% |
| !! | AAGGAAAATTATCTTTGAAT+GGG | + | chr1.3:53684926-53684945 | MS.gene71460:CDS | 20.0% |
| !! | AATCTGAGTACAATTATATT+GGG | - | chr1.3:53683633-53683652 | None:intergenic | 20.0% |
| !! | AGTAAATTTCATTAACATGT+CGG | - | chr1.3:53683786-53683805 | None:intergenic | 20.0% |
| !! | CACATGAAAATTAATCTTAA+TGG | - | chr1.3:53683732-53683751 | None:intergenic | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr1.3:53683296-53683315 | None:intergenic | 20.0% |
| !! | GAAAATCATATCATTCAAAA+TGG | - | chr1.3:53683875-53683894 | None:intergenic | 20.0% |
| !! | GTAAAAGATAACATAGTAAA+AGG | - | chr1.3:53684251-53684270 | None:intergenic | 20.0% |
| !! | TACATAAATAACTACATATG+TGG | + | chr1.3:53682533-53682552 | MS.gene71460:intron | 20.0% |
| !! | TATATACATGTAAGTGTAAA+TGG | + | chr1.3:53682400-53682419 | MS.gene71460:intron | 20.0% |
| !! | TATTCTTACTTGGTATAAAA+AGG | + | chr1.3:53684113-53684132 | MS.gene71460:intron | 20.0% |
| !! | TCTTGTAAATGAATAAAACA+TGG | + | chr1.3:53683678-53683697 | MS.gene71460:intron | 20.0% |
| !! | TTAGATTAACAAGAGATTTA+TGG | - | chr1.3:53685172-53685191 | None:intergenic | 20.0% |
| !! | TTTAGTGTAAATATATGTGT+CGG | + | chr1.3:53684644-53684663 | MS.gene71460:intron | 20.0% |
| !!! | ATATTGTTTCCAATTTTTGT+AGG | + | chr1.3:53682618-53682637 | MS.gene71460:intron | 20.0% |
| !!! | GTTGACATTCTTTTTATTTT+AGG | - | chr1.3:53683589-53683608 | None:intergenic | 20.0% |
| !!! | TAAATAATTTCCATGCATTT+TGG | + | chr1.3:53684738-53684757 | MS.gene71460:intron | 20.0% |
| !!! | TATTGTTTCCAATTTTTGTA+GGG | + | chr1.3:53682619-53682638 | MS.gene71460:intron | 20.0% |
| !!! | TGATTTAAAGAAGCTTTAAA+AGG | - | chr1.3:53683485-53683504 | None:intergenic | 20.0% |
| !!! | TTTAAATAAAAGGTATGTGT+TGG | + | chr1.3:53684785-53684804 | MS.gene71460:intron | 20.0% |
| !!! | TTTATTCTAGCTTTCATAAT+TGG | - | chr1.3:53685448-53685467 | None:intergenic | 20.0% |
| !!! | TTTTTGTCTTGTCATTTTTT+TGG | - | chr1.3:53685713-53685732 | None:intergenic | 20.0% |
| ! | AAAAACTCCATCTGTTAATA+AGG | + | chr1.3:53681776-53681795 | MS.gene71460:intron | 25.0% |
| ! | AAATGATCCACAATATTAGA+TGG | + | chr1.3:53685646-53685665 | MS.gene71460:intron | 25.0% |
| ! | ACATCAAACCATAAAAAATG+TGG | + | chr1.3:53686125-53686144 | MS.gene71460:CDS | 25.0% |
| ! | ACTGTACATATCAAACAAAA+AGG | - | chr1.3:53683189-53683208 | None:intergenic | 25.0% |
| ! | AGGAAAATTATCTTTGAATG+GGG | + | chr1.3:53684927-53684946 | MS.gene71460:CDS | 25.0% |
| ! | ATGTATATACGATATAGTGA+CGG | - | chr1.3:53682389-53682408 | None:intergenic | 25.0% |
| ! | CAAATACCACCAATATTTAT+AGG | + | chr1.3:53682738-53682757 | MS.gene71460:CDS | 25.0% |
| ! | CAAGGAAAATTATCTTTGAA+TGG | + | chr1.3:53684925-53684944 | MS.gene71460:CDS | 25.0% |
| ! | GAAAGTAGATATCAATATTG+AGG | + | chr1.3:53685028-53685047 | MS.gene71460:CDS | 25.0% |
| ! | GAATCTGAGTACAATTATAT+TGG | - | chr1.3:53683634-53683653 | None:intergenic | 25.0% |
| ! | GATAGATACATATTCATCTA+TGG | + | chr1.3:53686045-53686064 | MS.gene71460:CDS | 25.0% |
| ! | GATATATTAACACCAAACAA+CGG | + | chr1.3:53685309-53685328 | MS.gene71460:intron | 25.0% |
| ! | GGGATCACTATAAAAAAAAA+TGG | - | chr1.3:53683613-53683632 | None:intergenic | 25.0% |
| ! | GTAAATTTCATTAACATGTC+GGG | - | chr1.3:53683785-53683804 | None:intergenic | 25.0% |
| ! | GTAGAGATATTTAACATGAT+AGG | - | chr1.3:53685917-53685936 | None:intergenic | 25.0% |
| ! | GTGCAATTATGTATCTTAAT+AGG | + | chr1.3:53682057-53682076 | MS.gene71460:CDS | 25.0% |
| ! | GTGGATCATTTCTATTTATT+TGG | - | chr1.3:53685637-53685656 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr1.3:53683291-53683310 | None:intergenic | 25.0% |
| ! | TAAATTTCATTAACATGTCG+GGG | - | chr1.3:53683784-53683803 | None:intergenic | 25.0% |
| ! | TACTAAATGATTACTATGCA+GGG | + | chr1.3:53683965-53683984 | MS.gene71460:intron | 25.0% |
| ! | TATCAAATTATTAACGGTGT+CGG | - | chr1.3:53684613-53684632 | None:intergenic | 25.0% |
| ! | TATTTATTTGGTACTTCTTC+CGG | - | chr1.3:53685625-53685644 | None:intergenic | 25.0% |
| ! | TGAAAAGTGGAAAAATAATG+TGG | + | chr1.3:53686398-53686417 | MS.gene71460:CDS | 25.0% |
| ! | TGAAGATATCTTCAAGAAAT+GGG | + | chr1.3:53684983-53685002 | MS.gene71460:CDS | 25.0% |
| ! | TGTATATTCCCTACAAAAAT+TGG | - | chr1.3:53682630-53682649 | None:intergenic | 25.0% |
| ! | TTAAAAATGTGTCTGTAGTT+TGG | - | chr1.3:53685059-53685078 | None:intergenic | 25.0% |
| ! | TTACTAAATGATTACTATGC+AGG | + | chr1.3:53683964-53683983 | MS.gene71460:intron | 25.0% |
| ! | TTATAATGAATGAGAATGCA+AGG | + | chr1.3:53684907-53684926 | MS.gene71460:CDS | 25.0% |
| ! | TTGATTGTTCTTATGATTGA+AGG | - | chr1.3:53685870-53685889 | None:intergenic | 25.0% |
| ! | TTGTTTCATGTATTCTTACT+TGG | + | chr1.3:53684103-53684122 | MS.gene71460:intron | 25.0% |
| !! | AAAAGTATGGAATCTTTGTT+GGG | - | chr1.3:53686188-53686207 | None:intergenic | 25.0% |
| !! | ATGTATTCATGTGTTTTACA+AGG | - | chr1.3:53683941-53683960 | None:intergenic | 25.0% |
| !! | ATTTGAAAGAAAGCATGAAA+TGG | + | chr1.3:53684508-53684527 | MS.gene71460:CDS | 25.0% |
| !!! | AATGGTTCTTTTTTTCTTGT+AGG | + | chr1.3:53682418-53682437 | MS.gene71460:intron | 25.0% |
| !!! | ATGGTTCTTTTTTTCTTGTA+GGG | + | chr1.3:53682419-53682438 | MS.gene71460:intron | 25.0% |
| AAACCACAAGAAGTGATAAA+AGG | + | chr1.3:53684405-53684424 | MS.gene71460:CDS | 30.0% | |
| AAGATAACATAGTAAAAGGG+CGG | - | chr1.3:53684247-53684266 | None:intergenic | 30.0% | |
| AATCACGTTAGAAATTGCAT+TGG | + | chr1.3:53683500-53683519 | MS.gene71460:intron | 30.0% | |
| AATTGGGTAATAATCTAGTG+TGG | - | chr1.3:53684024-53684043 | None:intergenic | 30.0% | |
| ACGAAACAAATTTGTCTTAG+AGG | + | chr1.3:53685805-53685824 | MS.gene71460:intron | 30.0% | |
| ACTAAATGATTACTATGCAG+GGG | + | chr1.3:53683966-53683985 | MS.gene71460:intron | 30.0% | |
| ACTACTGTGTTTATATGCAT+TGG | - | chr1.3:53683102-53683121 | None:intergenic | 30.0% | |
| AGATACATATTCATCTATGG+AGG | + | chr1.3:53686048-53686067 | MS.gene71460:CDS | 30.0% | |
| AGCATATCTAAAAAGCTATG+AGG | - | chr1.3:53684718-53684737 | None:intergenic | 30.0% | |
| ATATCTTCAAGAAATGGGAA+TGG | + | chr1.3:53684988-53685007 | MS.gene71460:CDS | 30.0% | |
| ATCAATATCGTCAAGCTTAA+AGG | - | chr1.3:53681392-53681411 | None:intergenic | 30.0% | |
| ATCACGTTAGAAATTGCATT+GGG | + | chr1.3:53683501-53683520 | MS.gene71460:intron | 30.0% | |
| ATGAAGTACGTATACAAACA+CGG | + | chr1.3:53684565-53684584 | MS.gene71460:intron | 30.0% | |
| ATGATGTTACCTATGATTCA+GGG | + | chr1.3:53686012-53686031 | MS.gene71460:intron | 30.0% | |
| ATTCCTCATAATCTTTGACA+TGG | - | chr1.3:53681438-53681457 | None:intergenic | 30.0% | |
| ATTGTTAGTACCAAAATGCA+TGG | - | chr1.3:53684751-53684770 | None:intergenic | 30.0% | |
| CAAAATGGAAAACAGAAATC+TGG | - | chr1.3:53683860-53683879 | None:intergenic | 30.0% | |
| CAATAATAGTTAAGACACTC+AGG | - | chr1.3:53682794-53682813 | None:intergenic | 30.0% | |
| CATTCATTATAACACCTTGA+GGG | - | chr1.3:53684899-53684918 | None:intergenic | 30.0% | |
| CGAAACAAATTTGTCTTAGA+GGG | + | chr1.3:53685806-53685825 | MS.gene71460:intron | 30.0% | |
| CTAATTTATGTTGAGTCTCA+AGG | + | chr1.3:53683124-53683143 | MS.gene71460:intron | 30.0% | |
| CTGAAGATATCTTCAAGAAA+TGG | + | chr1.3:53684982-53685001 | MS.gene71460:CDS | 30.0% | |
| GATAAAAGGTTTCAAGAAAG+AGG | + | chr1.3:53684419-53684438 | MS.gene71460:CDS | 30.0% | |
| GGGTGATATAAACTTTGTTA+AGG | - | chr1.3:53681417-53681436 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | - | chr1.3:53683058-53683077 | None:intergenic | 30.0% | |
| GTACTCAGATTCTTTAAGTA+AGG | + | chr1.3:53683642-53683661 | MS.gene71460:intron | 30.0% | |
| GTTAGAAGACATTAAACAGT+GGG | + | chr1.3:53682187-53682206 | MS.gene71460:CDS | 30.0% | |
| GTTTACTCCATCTAATATTG+TGG | - | chr1.3:53685656-53685675 | None:intergenic | 30.0% | |
| TATGATGTTACCTATGATTC+AGG | + | chr1.3:53686011-53686030 | MS.gene71460:intron | 30.0% | |
| TCAATATCGTCAAGCTTAAA+GGG | - | chr1.3:53681391-53681410 | None:intergenic | 30.0% | |
| TCATTCATTATAACACCTTG+AGG | - | chr1.3:53684900-53684919 | None:intergenic | 30.0% | |
| TGATCTTGTCACATTCTTAT+TGG | + | chr1.3:53682160-53682179 | MS.gene71460:CDS | 30.0% | |
| TGGTTGTTGCCTATAAATAT+TGG | - | chr1.3:53682750-53682769 | None:intergenic | 30.0% | |
| TGTTAGAAGACATTAAACAG+TGG | + | chr1.3:53682186-53682205 | MS.gene71460:CDS | 30.0% | |
| TTAAAGCACAAGAGCAAAAA+TGG | - | chr1.3:53684150-53684169 | None:intergenic | 30.0% | |
| TTCCTCATAATCTTTGACAT+GGG | - | chr1.3:53681437-53681456 | None:intergenic | 30.0% | |
| TTGTTGCCTATAAATATTGG+TGG | - | chr1.3:53682747-53682766 | None:intergenic | 30.0% | |
| ! | AAACCTTTTATCACTTCTTG+TGG | - | chr1.3:53684411-53684430 | None:intergenic | 30.0% |
| ! | AAAGATTCCATACTTTTGGA+TGG | + | chr1.3:53686191-53686210 | MS.gene71460:CDS | 30.0% |
| ! | AAGACAAATTTGTTTCGTAG+AGG | - | chr1.3:53685803-53685822 | None:intergenic | 30.0% |
| ! | AAGAGGATTTCAAGATTTTG+TGG | + | chr1.3:53684436-53684455 | MS.gene71460:CDS | 30.0% |
| ! | AAGATTCCATACTTTTGGAT+GGG | + | chr1.3:53686192-53686211 | MS.gene71460:CDS | 30.0% |
| ! | CAAAAGTATGGAATCTTTGT+TGG | - | chr1.3:53686189-53686208 | None:intergenic | 30.0% |
| ! | CAACAAAGATTCCATACTTT+TGG | + | chr1.3:53686187-53686206 | MS.gene71460:CDS | 30.0% |
| ! | CTTATGCATCTGATTTGATT+TGG | - | chr1.3:53685580-53685599 | None:intergenic | 30.0% |
| !! | TGAACTCTTGTTGTACTTTT+CGG | - | chr1.3:53685372-53685391 | None:intergenic | 30.0% |
| !!! | AATTTTTTTCTTCCCAACAC+AGG | + | chr1.3:53684275-53684294 | MS.gene71460:intron | 30.0% |
| !!! | ATTTTTTTCTTCCCAACACA+GGG | + | chr1.3:53684276-53684295 | MS.gene71460:intron | 30.0% |
| !!! | TTGGGTTTTTTTTTCCTAGT+TGG | - | chr1.3:53686170-53686189 | None:intergenic | 30.0% |
| AAATTCTTCGACTCAGATAC+TGG | - | chr1.3:53685522-53685541 | None:intergenic | 35.0% | |
| AACTATTTGGATCATCACGA+TGG | - | chr1.3:53686599-53686618 | None:intergenic | 35.0% | |
| ACAAGATCAGTTATATCAGC+AGG | - | chr1.3:53682149-53682168 | None:intergenic | 35.0% | |
| ACTTTGCAACTTTCCAAATG+AGG | - | chr1.3:53682504-53682523 | None:intergenic | 35.0% | |
| ATGTTAAACTTCTCTCCTTC+TGG | - | chr1.3:53685496-53685515 | None:intergenic | 35.0% | |
| ATTCAATCATCAGACACACT+TGG | + | chr1.3:53682080-53682099 | MS.gene71460:CDS | 35.0% | |
| ATTTAGCATGTTTGTGCAAG+CGG | + | chr1.3:53683423-53683442 | MS.gene71460:intron | 35.0% | |
| ATTTCGAGATTAGACAGCAT+TGG | + | chr1.3:53684336-53684355 | MS.gene71460:CDS | 35.0% | |
| CAAGAATTCACAAGAGCAAT+TGG | + | chr1.3:53686090-53686109 | MS.gene71460:CDS | 35.0% | |
| CAATTGCTCTTGTGAATTCT+TGG | - | chr1.3:53686092-53686111 | None:intergenic | 35.0% | |
| GAAAGTTGCAAAGTGGAAAT+TGG | + | chr1.3:53682510-53682529 | MS.gene71460:CDS | 35.0% | |
| GAACCTTTCTGAATTGAACT+TGG | - | chr1.3:53682127-53682146 | None:intergenic | 35.0% | |
| GAATAAAACATGGTTGTGAG+TGG | + | chr1.3:53683688-53683707 | MS.gene71460:intron | 35.0% | |
| GATAGACGAAAGAAACAAGA+TGG | - | chr1.3:53681819-53681838 | None:intergenic | 35.0% | |
| GATTCCCATTGTGGATAATT+GGG | + | chr1.3:53684458-53684477 | MS.gene71460:CDS | 35.0% | |
| GGAGATCCCTTTATAATCTT+CGG | + | chr1.3:53682956-53682975 | MS.gene71460:intron | 35.0% | |
| GTTTGAAAGAAATCTGAGTC+TGG | - | chr1.3:53681656-53681675 | None:intergenic | 35.0% | |
| TAAAAAAAGGCTCTCTCATG+TGG | + | chr1.3:53682461-53682480 | MS.gene71460:CDS | 35.0% | |
| TAATTGTCAATGCCTGTGTT+TGG | - | chr1.3:53683555-53683574 | None:intergenic | 35.0% | |
| TAGCCAAGTTCAATTCAGAA+AGG | + | chr1.3:53682121-53682140 | MS.gene71460:CDS | 35.0% | |
| TATGATTCAGGGCATGAAAT+GGG | + | chr1.3:53686023-53686042 | MS.gene71460:intron | 35.0% | |
| TATGGTAGTTGGTTAGGAAT+TGG | - | chr1.3:53685685-53685704 | None:intergenic | 35.0% | |
| TCAAAACCCATTCTTATGTG+CGG | - | chr1.3:53685423-53685442 | None:intergenic | 35.0% | |
| TCAGCATCACTTATCCTAAA+AGG | - | chr1.3:53684966-53684985 | None:intergenic | 35.0% | |
| TCATCCCAATTATCCACAAT+GGG | - | chr1.3:53684465-53684484 | None:intergenic | 35.0% | |
| TCATTTGGAAAGTTGCAAAG+TGG | + | chr1.3:53682503-53682522 | MS.gene71460:CDS | 35.0% | |
| TCCAAAGATGTACCAATCAA+TGG | + | chr1.3:53681310-53681329 | MS.gene71460:CDS | 35.0% | |
| TCTATACCCATCCAAAAGTA+TGG | - | chr1.3:53686201-53686220 | None:intergenic | 35.0% | |
| TGAACCTATGTATCAAACTG+TGG | + | chr1.3:53686368-53686387 | MS.gene71460:CDS | 35.0% | |
| TTAGAAATTGCATTGGGAAG+TGG | + | chr1.3:53683507-53683526 | MS.gene71460:intron | 35.0% | |
| TTCATCCCAATTATCCACAA+TGG | - | chr1.3:53684466-53684485 | None:intergenic | 35.0% | |
| TTCTTGAGACTTCTGATCAA+AGG | + | chr1.3:53682702-53682721 | MS.gene71460:CDS | 35.0% | |
| TTGGGACCGAAGATTATAAA+GGG | - | chr1.3:53682965-53682984 | None:intergenic | 35.0% | |
| TTTAGTCACACCAATATCGA+TGG | + | chr1.3:53684214-53684233 | MS.gene71460:intron | 35.0% | |
| TTTGGAAGGAAAGAAATGAC+AGG | - | chr1.3:53685562-53685581 | None:intergenic | 35.0% | |
| ! | GAATCGATGCTTTTCCTTTT+AGG | + | chr1.3:53684949-53684968 | MS.gene71460:CDS | 35.0% |
| ! | TACTTTTCGGTTGTCTTACA+TGG | - | chr1.3:53685359-53685378 | None:intergenic | 35.0% |
| ! | TACTTTTGGATGGGTATAGA+TGG | + | chr1.3:53686201-53686220 | MS.gene71460:CDS | 35.0% |
| ! | TCAAGAAATGGGAATGGTTT+TGG | + | chr1.3:53684994-53685013 | MS.gene71460:CDS | 35.0% |
| ! | TCATTGGATTAGACGTGTTT+CGG | - | chr1.3:53684686-53684705 | None:intergenic | 35.0% |
| !! | AAGCTTTGATGAAGCTTTTC+AGG | + | chr1.3:53686431-53686450 | MS.gene71460:CDS | 35.0% |
| !! | CATGTTACACTTTTTGGTCA+TGG | + | chr1.3:53686345-53686364 | MS.gene71460:CDS | 35.0% |
| !! | TAGAGGCATTATTACTTCTG+AGG | - | chr1.3:53685786-53685805 | None:intergenic | 35.0% |
| !! | TGCATCTGATTTGATTTGGA+AGG | - | chr1.3:53685576-53685595 | None:intergenic | 35.0% |
| !!! | GGTTTTTTTTTCCTAGTTGG+TGG | - | chr1.3:53686167-53686186 | None:intergenic | 35.0% |
| !!! | GTCAACGTCCACATTTTTTA+TGG | - | chr1.3:53686136-53686155 | None:intergenic | 35.0% |
| !!! | GTCATTTTTTTGGCCAGTTA+TGG | - | chr1.3:53685703-53685722 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr1.3:53682897-53682916 | None:intergenic | 35.0% |
| AAAAAGACCCCAAGCAAACA+CGG | + | chr1.3:53685841-53685860 | MS.gene71460:intron | 40.0% | |
| AACTCTAGCTGCATTCTCTT+TGG | + | chr1.3:53682028-53682047 | MS.gene71460:CDS | 40.0% | |
| AAGACTTCAATACCCTGTGT+TGG | - | chr1.3:53684291-53684310 | None:intergenic | 40.0% | |
| AATGCCTGTGTTTGGATTCA+CGG | - | chr1.3:53683547-53683566 | None:intergenic | 40.0% | |
| ACTGTCCAATACACAACAAG+AGG | - | chr1.3:53682281-53682300 | None:intergenic | 40.0% | |
| ACTTGTCCAAATCCTACTTG+TGG | + | chr1.3:53686534-53686553 | MS.gene71460:CDS | 40.0% | |
| AGACTTCAATACCCTGTGTT+GGG | - | chr1.3:53684290-53684309 | None:intergenic | 40.0% | |
| AGACTTCTGATCAAAGGCAA+TGG | + | chr1.3:53682708-53682727 | MS.gene71460:CDS | 40.0% | |
| AGGCAACAACCAAGTTAAAC+AGG | + | chr1.3:53682758-53682777 | MS.gene71460:CDS | 40.0% | |
| AGTTCCAGAAATCTGAGTTG+AGG | - | chr1.3:53681506-53681525 | None:intergenic | 40.0% | |
| ATAGAAGAACCCATCCTGAT+GGG | - | chr1.3:53686314-53686333 | None:intergenic | 40.0% | |
| ATTGCATTGGGAAGTGGAAA+AGG | + | chr1.3:53683513-53683532 | MS.gene71460:intron | 40.0% | |
| CAAAACCCATTCTTATGTGC+GGG | - | chr1.3:53685422-53685441 | None:intergenic | 40.0% | |
| CAAGTTAAACAGGTTAGTGC+TGG | + | chr1.3:53682768-53682787 | MS.gene71460:intron | 40.0% | |
| CAATACCCGCACATAAGAAT+GGG | + | chr1.3:53685414-53685433 | MS.gene71460:intron | 40.0% | |
| CACCCATGTCAAAGATTATG+AGG | + | chr1.3:53681432-53681451 | MS.gene71460:CDS | 40.0% | |
| CAGCACTAACCTGTTTAACT+TGG | - | chr1.3:53682770-53682789 | None:intergenic | 40.0% | |
| CATTTCATGCCCTGAATCAT+AGG | - | chr1.3:53686024-53686043 | None:intergenic | 40.0% | |
| CGTCAAGCTTAAAGGGATTA+GGG | - | chr1.3:53681384-53681403 | None:intergenic | 40.0% | |
| CTATGATTCAGGGCATGAAA+TGG | + | chr1.3:53686022-53686041 | MS.gene71460:intron | 40.0% | |
| CTTGGGACCGAAGATTATAA+AGG | - | chr1.3:53682966-53682985 | None:intergenic | 40.0% | |
| GAGCTGAGATTTCTGTTCTT+GGG | - | chr1.3:53681362-53681381 | None:intergenic | 40.0% | |
| GCACAAGAGCAAAAATGGTT+TGG | - | chr1.3:53684145-53684164 | None:intergenic | 40.0% | |
| GGATTCCCATTGTGGATAAT+TGG | + | chr1.3:53684457-53684476 | MS.gene71460:CDS | 40.0% | |
| GTTACCAGTACATGCAACAA+TGG | - | chr1.3:53682309-53682328 | None:intergenic | 40.0% | |
| GTTGGAGACAAGCTTGAAAA+GGG | - | chr1.3:53681473-53681492 | None:intergenic | 40.0% | |
| TACATCTTTGGACAATGCAG+TGG | - | chr1.3:53681302-53681321 | None:intergenic | 40.0% | |
| TAGTTGGTTAGGAATTGGCT+TGG | - | chr1.3:53685680-53685699 | None:intergenic | 40.0% | |
| TATGAGGCACAAACACTCAT+TGG | - | chr1.3:53684702-53684721 | None:intergenic | 40.0% | |
| TCAGCCACAGTTTGATACAT+AGG | - | chr1.3:53686375-53686394 | None:intergenic | 40.0% | |
| TCCTAACCAACTACCATAAC+TGG | + | chr1.3:53685687-53685706 | MS.gene71460:intron | 40.0% | |
| TCGTCAAGCTTAAAGGGATT+AGG | - | chr1.3:53681385-53681404 | None:intergenic | 40.0% | |
| TGAATTCTTGGACCCACTTT+GGG | - | chr1.3:53686080-53686099 | None:intergenic | 40.0% | |
| TGTTGGAGACAAGCTTGAAA+AGG | - | chr1.3:53681474-53681493 | None:intergenic | 40.0% | |
| TTAAACTTCTCTCCTTCTGG+TGG | - | chr1.3:53685493-53685512 | None:intergenic | 40.0% | |
| ! | ACATCGAGATTTTCCATAGC+CGG | + | chr1.3:53685603-53685622 | MS.gene71460:intron | 40.0% |
| ! | GACATTGATTACCACCAACT+AGG | + | chr1.3:53686153-53686172 | MS.gene71460:CDS | 40.0% |
| ! | GATGGGTTCTTCTATGTAGA+GGG | + | chr1.3:53686319-53686338 | MS.gene71460:CDS | 40.0% |
| ! | GATTTTGTGGATTCCCATTG+TGG | + | chr1.3:53684449-53684468 | MS.gene71460:CDS | 40.0% |
| ! | GCCATTGATTGGTACATCTT+TGG | - | chr1.3:53681314-53681333 | None:intergenic | 40.0% |
| ! | GGATTCCTCTTGTTGTGTAT+TGG | + | chr1.3:53682273-53682292 | MS.gene71460:CDS | 40.0% |
| ! | GGGCATCATGTTACACTTTT+TGG | + | chr1.3:53686339-53686358 | MS.gene71460:CDS | 40.0% |
| ! | GTCAGGTTAGTTGTCAATGT+CGG | + | chr1.3:53681706-53681725 | MS.gene71460:intron | 40.0% |
| ! | TATCAATGCTTTTGCTTCCC+AGG | - | chr1.3:53682009-53682028 | None:intergenic | 40.0% |
| ! | TGTTTGCTTGGGGTCTTTTT+CGG | - | chr1.3:53685841-53685860 | None:intergenic | 40.0% |
| ! | TTTTGGCCAGTTATGGTAGT+TGG | - | chr1.3:53685696-53685715 | None:intergenic | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr1.3:53682896-53682915 | None:intergenic | 40.0% |
| !! | CTGTGGCTGATTTTGAAAAG+TGG | + | chr1.3:53686385-53686404 | MS.gene71460:CDS | 40.0% |
| !! | TGTAGCTTTAAACCACCAGA+AGG | + | chr1.3:53685478-53685497 | MS.gene71460:intron | 40.0% |
| !!! | TTGGGAGGTACCATTCTTTT+GGG | - | chr1.3:53681344-53681363 | None:intergenic | 40.0% |
| AAAAAGGCTCTCTCATGTGG+TGG | + | chr1.3:53682464-53682483 | MS.gene71460:CDS | 45.0% | |
| AACACTTCTCTGAGCTACCA+GGG | + | chr1.3:53684808-53684827 | MS.gene71460:CDS | 45.0% | |
| AAGGTTTCCGTGTTTGCTTG+GGG | - | chr1.3:53685851-53685870 | None:intergenic | 45.0% | |
| ACACGTCCACAAGTAGGATT+TGG | - | chr1.3:53686543-53686562 | None:intergenic | 45.0% | |
| ACATTAAACAGTGGGCAGCA+TGG | + | chr1.3:53682195-53682214 | MS.gene71460:CDS | 45.0% | |
| ATCCAGCATAAGGCATAGTG+TGG | + | chr1.3:53683992-53684011 | MS.gene71460:intron | 45.0% | |
| ATGTGGTGGTTAACGAGTTG+AGG | + | chr1.3:53682478-53682497 | MS.gene71460:CDS | 45.0% | |
| CAAACAAGACCCATCAGGAT+GGG | + | chr1.3:53686302-53686321 | MS.gene71460:CDS | 45.0% | |
| CACACCAATATCGATGGTCT+AGG | + | chr1.3:53684220-53684239 | MS.gene71460:intron | 45.0% | |
| CATAGAAGAACCCATCCTGA+TGG | - | chr1.3:53686315-53686334 | None:intergenic | 45.0% | |
| CCAATACCCGCACATAAGAA+TGG | + | chr1.3:53685413-53685432 | MS.gene71460:intron | 45.0% | |
| CCATTCTTATGTGCGGGTAT+TGG | - | chr1.3:53685416-53685435 | None:intergenic | 45.0% | |
| CCTGAAGAGGATTTCTTGTC+AGG | + | chr1.3:53681689-53681708 | MS.gene71460:CDS | 45.0% | |
| CCTGACAAGAAATCCTCTTC+AGG | - | chr1.3:53681692-53681711 | None:intergenic | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | + | chr1.3:53683149-53683168 | MS.gene71460:intron | 45.0% | |
| CTGAGATTTCTGTTCTTGGG+AGG | - | chr1.3:53681359-53681378 | None:intergenic | 45.0% | |
| CTTTGCCTGATGCTATGCAA+TGG | + | chr1.3:53682252-53682271 | MS.gene71460:CDS | 45.0% | |
| GAACTTACGATATACCGACG+AGG | - | chr1.3:53682331-53682350 | None:intergenic | 45.0% | |
| GAAGGTTTCCGTGTTTGCTT+GGG | - | chr1.3:53685852-53685871 | None:intergenic | 45.0% | |
| GCCAGTTATGGTAGTTGGTT+AGG | - | chr1.3:53685691-53685710 | None:intergenic | 45.0% | |
| GCTACCATTGTTGCATGTAC+TGG | + | chr1.3:53682302-53682321 | MS.gene71460:CDS | 45.0% | |
| GGAATCCATTGCATAGCATC+AGG | - | chr1.3:53682260-53682279 | None:intergenic | 45.0% | |
| GGAGAATCCACATTGTTGTC+TGG | - | chr1.3:53681968-53681987 | None:intergenic | 45.0% | |
| GGAGCTGAGATTTCTGTTCT+TGG | - | chr1.3:53681363-53681382 | None:intergenic | 45.0% | |
| GTCTGCTTTCGGTTATGACT+TGG | + | chr1.3:53682217-53682236 | MS.gene71460:CDS | 45.0% | |
| GTGAATTCTTGGACCCACTT+TGG | - | chr1.3:53686081-53686100 | None:intergenic | 45.0% | |
| GTTTGTGCAAGCGGTAGATT+TGG | + | chr1.3:53683432-53683451 | MS.gene71460:intron | 45.0% | |
| TCAAACAAGACCCATCAGGA+TGG | + | chr1.3:53686301-53686320 | MS.gene71460:CDS | 45.0% | |
| TCTGCCTCAACTCAGATTTC+TGG | + | chr1.3:53681499-53681518 | MS.gene71460:CDS | 45.0% | |
| TGAAGGTTTCCGTGTTTGCT+TGG | - | chr1.3:53685853-53685872 | None:intergenic | 45.0% | |
| TGTCTCAAACAAGACCCATC+AGG | + | chr1.3:53686297-53686316 | MS.gene71460:CDS | 45.0% | |
| TTCTTTATTATCCCACGCCC+TGG | - | chr1.3:53684828-53684847 | None:intergenic | 45.0% | |
| TTTGGTACTTCTTCCGGCTA+TGG | - | chr1.3:53685619-53685638 | None:intergenic | 45.0% | |
| ! | AAATCTGAGTTGAGGCAGAG+AGG | - | chr1.3:53681498-53681517 | None:intergenic | 45.0% |
| ! | GGATGGGTTCTTCTATGTAG+AGG | + | chr1.3:53686318-53686337 | MS.gene71460:CDS | 45.0% |
| ! | GGGTTGATCACTGCGAAAAT+AGG | - | chr1.3:53684879-53684898 | None:intergenic | 45.0% |
| ! | TAACGAGTTGAGGCCTCATT+TGG | + | chr1.3:53682488-53682507 | MS.gene71460:CDS | 45.0% |
| !! | CAAACAACGGACTATCTAGG+CGG | + | chr1.3:53685322-53685341 | MS.gene71460:intron | 45.0% |
| !! | CACCAAACAACGGACTATCT+AGG | + | chr1.3:53685319-53685338 | MS.gene71460:intron | 45.0% |
| !! | GCTGCATTCTCTTTGGAGTA+TGG | + | chr1.3:53682035-53682054 | MS.gene71460:CDS | 45.0% |
| !! | TATATGTGTCGGTGTCGTGT+CGG | + | chr1.3:53684655-53684674 | MS.gene71460:intron | 45.0% |
| !!! | CTTGGGAGGTACCATTCTTT+TGG | - | chr1.3:53681345-53681364 | None:intergenic | 45.0% |
| !!! | GGGAAGTGGAAAAGGTGTTT+TGG | + | chr1.3:53683521-53683540 | MS.gene71460:intron | 45.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | + | chr1.3:53682934-53682953 | MS.gene71460:intron | 5.0% |
| !!! | TAATTTTATCAAATTATTAA+CGG | - | chr1.3:53684619-53684638 | None:intergenic | 5.0% |
| !!! | TTATTTTTGTTTTAAATAAA+AGG | + | chr1.3:53684775-53684794 | MS.gene71460:intron | 5.0% |
| !!! | TTTTTTTTTTAAAGAATTTA+GGG | + | chr1.3:53685224-53685243 | MS.gene71460:intron | 5.0% |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr1.3:53682880-53682899 | MS.gene71460:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr1.3:53682881-53682900 | MS.gene71460:intron | 50.0% | |
| AGCCACACTATGCCTTATGC+TGG | - | chr1.3:53683997-53684016 | None:intergenic | 50.0% | |
| AGGTAGCTTCTGCTGAAACG+TGG | - | chr1.3:53683465-53683484 | None:intergenic | 50.0% | |
| AGTTGAGGCAGAGAGGATGT+TGG | - | chr1.3:53681491-53681510 | None:intergenic | 50.0% | |
| ATCACCTCAGAGACTTCTCC+TGG | + | chr1.3:53681988-53682007 | MS.gene71460:CDS | 50.0% | |
| CAGACTTCTCTGTCCTGAAG+AGG | + | chr1.3:53681676-53681695 | MS.gene71460:CDS | 50.0% | |
| CGCCTAGATAGTCCGTTGTT+TGG | - | chr1.3:53685324-53685343 | None:intergenic | 50.0% | |
| CGGACCTAGACCATCGATAT+TGG | - | chr1.3:53684227-53684246 | None:intergenic | 50.0% | |
| CTCTTCAGGACAGAGAAGTC+TGG | - | chr1.3:53681678-53681697 | None:intergenic | 50.0% | |
| GAACACTTCTCTGAGCTACC+AGG | + | chr1.3:53684807-53684826 | MS.gene71460:CDS | 50.0% | |
| GGCACTACGACCCAAAAGAA+TGG | + | chr1.3:53681331-53681350 | MS.gene71460:CDS | 50.0% | |
| GTGCACACCAGACAACAATG+TGG | + | chr1.3:53681958-53681977 | MS.gene71460:CDS | 50.0% | |
| TACTTGTGGACGTGTGATGG+AGG | + | chr1.3:53686548-53686567 | MS.gene71460:CDS | 50.0% | |
| TCACCTCAGAGACTTCTCCT+GGG | + | chr1.3:53681989-53682008 | MS.gene71460:CDS | 50.0% | |
| TCCATCACACGTCCACAAGT+AGG | - | chr1.3:53686549-53686568 | None:intergenic | 50.0% | |
| TCCTACTTGTGGACGTGTGA+TGG | + | chr1.3:53686545-53686564 | MS.gene71460:CDS | 50.0% | |
| TTCGCAGTGATCAACCCTCA+AGG | + | chr1.3:53684882-53684901 | MS.gene71460:CDS | 50.0% | |
| TTGGCCGTGAATCCAAACAC+AGG | + | chr1.3:53683540-53683559 | MS.gene71460:intron | 50.0% | |
| ! | GCATGTACTGGTAACCTCGT+CGG | + | chr1.3:53682314-53682333 | MS.gene71460:CDS | 50.0% |
| ! | TGACAGATGATAACGACCCG+CGG | + | chr1.3:53681924-53681943 | MS.gene71460:intron | 50.0% |
| ! | TGGGTCGTAGTGCCATTGAT+TGG | - | chr1.3:53681325-53681344 | None:intergenic | 50.0% |
| !! | AGCTGTGTGTTTCTGGCTGT+GGG | - | chr1.3:53685760-53685779 | None:intergenic | 50.0% |
| !! | AGGAGAAGTCTCTGAGGTGA+TGG | - | chr1.3:53681989-53682008 | None:intergenic | 50.0% |
| !! | TGTTTCTGGCTGTGGGCAAA+TGG | - | chr1.3:53685753-53685772 | None:intergenic | 50.0% |
| ATGGAGGCAACGACCCAAAG+TGG | + | chr1.3:53686064-53686083 | MS.gene71460:CDS | 55.0% | |
| CTTCCCAGGAGAAGTCTCTG+AGG | - | chr1.3:53681995-53682014 | None:intergenic | 55.0% | |
| GAGGCTCAGCTGTGTGTTTC+TGG | - | chr1.3:53685767-53685786 | None:intergenic | 55.0% | |
| TGGAGGCAACGACCCAAAGT+GGG | + | chr1.3:53686065-53686084 | MS.gene71460:CDS | 55.0% | |
| TGGGCAGCATGGTCTGCTTT+CGG | + | chr1.3:53682206-53682225 | MS.gene71460:CDS | 55.0% | |
| !! | CAGCTGTGTGTTTCTGGCTG+TGG | - | chr1.3:53685761-53685780 | None:intergenic | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr1.3:53682891-53682910 | None:intergenic | 60.0% | |
| GTGCACATTCTGCTGTGCCG+CGG | - | chr1.3:53681944-53681963 | None:intergenic | 60.0% | |
| TCTCTGAGCTACCAGGGCGT+GGG | + | chr1.3:53684814-53684833 | MS.gene71460:CDS | 60.0% | |
| TGCACATTCTGCTGTGCCGC+GGG | - | chr1.3:53681943-53681962 | None:intergenic | 60.0% | |
| TTCTCTGAGCTACCAGGGCG+TGG | + | chr1.3:53684813-53684832 | MS.gene71460:CDS | 60.0% | |
| !! | GCAGGGGAGCATCCAGCATA+AGG | + | chr1.3:53683982-53684001 | MS.gene71460:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 53681295 | 53686629 | 53681295 | ID=MS.gene71460 |
| chr1.3 | mRNA | 53681295 | 53686629 | 53681295 | ID=MS.gene71460.t1;Parent=MS.gene71460 |
| chr1.3 | exon | 53681295 | 53681540 | 53681295 | ID=MS.gene71460.t1.exon1;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53681295 | 53681540 | 53681295 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| chr1.3 | exon | 53681657 | 53681710 | 53681657 | ID=MS.gene71460.t1.exon2;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53681657 | 53681710 | 53681657 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| chr1.3 | exon | 53681930 | 53682342 | 53681930 | ID=MS.gene71460.t1.exon3;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53681930 | 53682342 | 53681930 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| chr1.3 | exon | 53682440 | 53682531 | 53682440 | ID=MS.gene71460.t1.exon4;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53682440 | 53682531 | 53682440 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| chr1.3 | exon | 53682640 | 53682779 | 53682640 | ID=MS.gene71460.t1.exon5;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53682640 | 53682779 | 53682640 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| chr1.3 | exon | 53684297 | 53684529 | 53684297 | ID=MS.gene71460.t1.exon6;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53684297 | 53684529 | 53684297 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| chr1.3 | exon | 53684797 | 53685049 | 53684797 | ID=MS.gene71460.t1.exon7;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53684797 | 53685049 | 53684797 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| chr1.3 | exon | 53686033 | 53686629 | 53686033 | ID=MS.gene71460.t1.exon8;Parent=MS.gene71460.t1 |
| chr1.3 | CDS | 53686033 | 53686629 | 53686033 | ID=cds.MS.gene71460.t1;Parent=MS.gene71460.t1 |
| Gene Sequence |
| Protein sequence |
