Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99526.t1 | XP_013466946.1 | 97.4 | 701 | 18 | 0 | 1 | 701 | 1 | 701 | 0.00E+00 | 1404.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99526.t1 | Q9SS87 | 27.6 | 721 | 441 | 24 | 27 | 683 | 34 | 737 | 7.4e-63 | 243.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99526.t1 | E2FKJ2 | 97.4 | 701 | 18 | 0 | 1 | 701 | 1 | 701 | 0.0e+00 | 1404.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049239 | MS.gene99526 | 0.814871 | 1.24E-51 | -1.69E-46 |
| MS.gene05017 | MS.gene99526 | 0.803608 | 3.21E-49 | -1.69E-46 |
| MS.gene051646 | MS.gene99526 | 0.836794 | 7.59E-57 | -1.69E-46 |
| MS.gene053348 | MS.gene99526 | 0.819715 | 1.00E-52 | -1.69E-46 |
| MS.gene054118 | MS.gene99526 | 0.822285 | 2.57E-53 | -1.69E-46 |
| MS.gene055777 | MS.gene99526 | 0.808728 | 2.69E-50 | -1.69E-46 |
| MS.gene056041 | MS.gene99526 | 0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene056042 | MS.gene99526 | 0.800075 | 1.71E-48 | -1.69E-46 |
| MS.gene058823 | MS.gene99526 | 0.811965 | 5.38E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene99526 | 0.820088 | 8.25E-53 | -1.69E-46 |
| MS.gene058909 | MS.gene99526 | 0.807755 | 4.33E-50 | -1.69E-46 |
| MS.gene058912 | MS.gene99526 | 0.806752 | 7.06E-50 | -1.69E-46 |
| MS.gene060547 | MS.gene99526 | 0.823233 | 1.55E-53 | -1.69E-46 |
| MS.gene060548 | MS.gene99526 | 0.803299 | 3.73E-49 | -1.69E-46 |
| MS.gene060825 | MS.gene99526 | 0.853003 | 3.18E-61 | -1.69E-46 |
| MS.gene061260 | MS.gene99526 | 0.811949 | 5.42E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99526.t1 | MTR_1g040360 | 97.432 | 701 | 18 | 0 | 1 | 701 | 1 | 701 | 0.0 | 1430 |
| MS.gene99526.t1 | MTR_1g075180 | 46.852 | 683 | 310 | 15 | 16 | 687 | 2 | 642 | 0.0 | 585 |
| MS.gene99526.t1 | MTR_1g075153 | 42.544 | 684 | 356 | 9 | 2 | 677 | 8 | 662 | 0.0 | 546 |
| MS.gene99526.t1 | MTR_1g075170 | 42.522 | 682 | 357 | 13 | 5 | 677 | 11 | 666 | 2.39e-171 | 506 |
| MS.gene99526.t1 | MTR_1g074950 | 37.575 | 668 | 392 | 11 | 25 | 685 | 21 | 670 | 2.04e-149 | 450 |
| MS.gene99526.t1 | MTR_1g074990 | 36.132 | 667 | 402 | 10 | 25 | 685 | 20 | 668 | 3.25e-149 | 449 |
| MS.gene99526.t1 | MTR_1g075230 | 35.747 | 663 | 396 | 11 | 25 | 677 | 20 | 662 | 5.26e-142 | 431 |
| MS.gene99526.t1 | MTR_1g075095 | 35.347 | 662 | 402 | 11 | 25 | 678 | 20 | 663 | 5.49e-140 | 425 |
| MS.gene99526.t1 | MTR_1g075030 | 35.045 | 662 | 404 | 11 | 25 | 678 | 20 | 663 | 2.22e-139 | 424 |
| MS.gene99526.t1 | MTR_7g032660 | 30.085 | 708 | 430 | 23 | 21 | 677 | 17 | 710 | 2.05e-87 | 290 |
| MS.gene99526.t1 | MTR_8g089660 | 28.973 | 711 | 415 | 25 | 30 | 677 | 20 | 703 | 2.06e-75 | 257 |
| MS.gene99526.t1 | MTR_3g075450 | 28.058 | 695 | 431 | 21 | 31 | 676 | 30 | 704 | 1.35e-71 | 246 |
| MS.gene99526.t1 | MTR_8g063020 | 38.798 | 183 | 85 | 6 | 93 | 274 | 36 | 192 | 1.19e-20 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99526.t1 | AT3G01680 | 27.716 | 718 | 444 | 23 | 27 | 683 | 34 | 737 | 7.05e-67 | 234 |
| MS.gene99526.t1 | AT3G01670 | 25.532 | 752 | 447 | 26 | 4 | 676 | 103 | 820 | 5.00e-50 | 188 |
| MS.gene99526.t1 | AT3G01670 | 25.399 | 752 | 448 | 26 | 4 | 676 | 127 | 844 | 6.07e-50 | 188 |
| MS.gene99526.t1 | AT1G67790 | 24.319 | 514 | 345 | 15 | 28 | 517 | 9 | 502 | 6.21e-28 | 120 |
Find 136 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAATCGTTCCTCGTTTC+TGG | 0.066845 | 1.3:+23294285 | MS.gene99526:CDS |
| CTCAAAAGTGGAATTGGTTT+TGG | 0.154712 | 1.3:+23293945 | MS.gene99526:CDS |
| TTCCATTGTAAGCAAATTAA+AGG | 0.155216 | 1.3:+23292808 | MS.gene99526:CDS |
| CATTAGAATATGGAAATTTC+TGG | 0.161510 | 1.3:+23292223 | MS.gene99526:CDS |
| GCAAAGTCATGTGTCCATTT+TGG | 0.177728 | 1.3:-23294176 | None:intergenic |
| CATGTGTTGGTATTCATTTC+AGG | 0.222644 | 1.3:+23293548 | MS.gene99526:CDS |
| AGATTCCTGTTGCTGTTTAT+TGG | 0.243721 | 1.3:+23292463 | MS.gene99526:CDS |
| AAATCATATGCATTGCATTA+TGG | 0.255922 | 1.3:-23293868 | None:intergenic |
| CAGAAATATGCTTCAGTTTA+CGG | 0.256894 | 1.3:-23291583 | None:intergenic |
| TCTATCCCTTGGCTGGAATA+AGG | 0.257305 | 1.3:+23293771 | MS.gene99526:CDS |
| GAAGACAGACTTCCCTTATC+TGG | 0.274120 | 1.3:+23291545 | MS.gene99526:CDS |
| GTGAATGTGAATCAGATTAA+AGG | 0.277979 | 1.3:+23294119 | MS.gene99526:intron |
| AGTCTTCCACAATGAAATTC+AGG | 0.283440 | 1.3:+23293106 | MS.gene99526:CDS |
| GATTCCTGTTGCTGTTTATT+GGG | 0.286090 | 1.3:+23292464 | MS.gene99526:CDS |
| CACTTACTCAAAAGTGGAAT+TGG | 0.308731 | 1.3:+23293939 | MS.gene99526:CDS |
| ACGGAGGAACAGACCCAAAA+TGG | 0.326130 | 1.3:+23294162 | MS.gene99526:CDS |
| TTTGAATCAGGACAGTAAAT+AGG | 0.340556 | 1.3:-23294629 | None:intergenic |
| CAGGTGAGCTAGAAGATTAC+TGG | 0.342565 | 1.3:+23293027 | MS.gene99526:intron |
| GTTCTTCCACAGTTTGAATC+AGG | 0.348453 | 1.3:-23294641 | None:intergenic |
| AGGTTAGCATCGAAGTGTTT+AGG | 0.358989 | 1.3:+23293519 | MS.gene99526:intron |
| TTATCATCACTCCATGCTAA+TGG | 0.362851 | 1.3:-23291277 | None:intergenic |
| TGAATGTGAATCAGATTAAA+GGG | 0.366060 | 1.3:+23294120 | MS.gene99526:intron |
| CAAATTCAGCTTTGTGAAGT+AGG | 0.370216 | 1.3:-23293706 | None:intergenic |
| GAAGAACCAAGAGAACTAAA+AGG | 0.372963 | 1.3:+23293629 | MS.gene99526:CDS |
| TCATCGTCTGTGGGACGAAA+AGG | 0.392262 | 1.3:-23293914 | None:intergenic |
| TTGGAAAAGCTTTCAACAAA+AGG | 0.397341 | 1.3:+23292396 | MS.gene99526:CDS |
| TATCATCACTCCATGCTAAT+GGG | 0.399622 | 1.3:-23291276 | None:intergenic |
| AGGGTCCAATCATCCACAAT+TGG | 0.400463 | 1.3:-23293686 | None:intergenic |
| CATTGCTGATTACAACAGTT+TGG | 0.400657 | 1.3:+23292335 | MS.gene99526:CDS |
| CGACCGAGCAGTTTCACATT+TGG | 0.403560 | 1.3:-23294434 | None:intergenic |
| CTTACAAGGTCTTGGAGTCT+TGG | 0.407678 | 1.3:-23293989 | None:intergenic |
| TTCTTGTAGTCCAGCGTAGA+TGG | 0.412320 | 1.3:-23293609 | None:intergenic |
| GACACATTCATCTTCATATA+CGG | 0.413666 | 1.3:+23294143 | MS.gene99526:CDS |
| AATTTGTACTTACAAGGTCT+TGG | 0.416127 | 1.3:-23293997 | None:intergenic |
| CACCGGTGTGGACATGAGTT+AGG | 0.420531 | 1.3:-23291318 | None:intergenic |
| ATCGTTCCTCGTTTCTGGAT+TGG | 0.420969 | 1.3:+23294290 | MS.gene99526:CDS |
| AAAACCTCAACAATTTCTGT+TGG | 0.423007 | 1.3:-23293074 | None:intergenic |
| GGGTTCAGAACAGGTAGAAT+TGG | 0.427233 | 1.3:-23293827 | None:intergenic |
| CACCACTTGGTGTTTGAACT+AGG | 0.444045 | 1.3:-23292248 | None:intergenic |
| AAGATTACTGGAGGCGTAAG+AGG | 0.445082 | 1.3:+23293039 | MS.gene99526:CDS |
| ATAGCCCAATAAACAGCAAC+AGG | 0.445960 | 1.3:-23292468 | None:intergenic |
| GGATCCCAATTGTGGATGAT+TGG | 0.449147 | 1.3:+23293681 | MS.gene99526:CDS |
| GAGTACTTCTATCCCTTGGC+TGG | 0.451475 | 1.3:+23293764 | MS.gene99526:CDS |
| TGCATATTAGCACAAGCAAC+AGG | 0.456296 | 1.3:-23294575 | None:intergenic |
| TAGATGATGAGCACACTTCC+TGG | 0.460640 | 1.3:+23292105 | MS.gene99526:intron |
| GCCTAACATGTCGTCTTCAA+TGG | 0.463271 | 1.3:+23291195 | None:intergenic |
| ATGAATCACTTACTCAAAAG+TGG | 0.467148 | 1.3:+23293933 | MS.gene99526:CDS |
| CGCTGATAGTGTTGCATCCA+AGG | 0.468545 | 1.3:+23291405 | MS.gene99526:CDS |
| AGCCTTTAATTTGCTTACAA+TGG | 0.473426 | 1.3:-23292810 | None:intergenic |
| CTACCTAGAGGGTTCAGAAC+AGG | 0.476347 | 1.3:-23293836 | None:intergenic |
| CTGTCTTCTACAAGACCTAC+AGG | 0.477249 | 1.3:-23291530 | None:intergenic |
| AAATTCAGCTTTGTGAAGTA+GGG | 0.482259 | 1.3:-23293705 | None:intergenic |
| AGGAGGCTCATAACCAGATA+AGG | 0.484803 | 1.3:-23291558 | None:intergenic |
| TGATGGCTTGAACAGACAAA+TGG | 0.485289 | 1.3:+23293142 | MS.gene99526:CDS |
| CAAACAAGACCAGCCAGGTT+GGG | 0.490006 | 1.3:+23294394 | MS.gene99526:CDS |
| TCTCGTCTCTTATGCTGTCT+AGG | 0.493672 | 1.3:-23293571 | None:intergenic |
| AAGAAGATTTCAAGATCTTG+TGG | 0.495575 | 1.3:+23293660 | MS.gene99526:CDS |
| ATCAGCTGAAATCCCATACA+TGG | 0.498650 | 1.3:+23292166 | MS.gene99526:CDS |
| ACATTACTTGCAAGTGAAGC+TGG | 0.499453 | 1.3:-23291220 | None:intergenic |
| ACAAGGAGCAGAAAGCATAT+AGG | 0.503383 | 1.3:+23292839 | MS.gene99526:CDS |
| AATTAAAGGCTCATCTTACA+AGG | 0.509783 | 1.3:+23292822 | MS.gene99526:CDS |
| GGGTCCAATCATCCACAATT+GGG | 0.510095 | 1.3:-23293685 | None:intergenic |
| GGAGGCTCATAACCAGATAA+GGG | 0.525657 | 1.3:-23291557 | None:intergenic |
| ACACCAAGTGGTGACTCACT+TGG | 0.527054 | 1.3:+23292258 | MS.gene99526:CDS |
| CATCGTCTGTGGGACGAAAA+GGG | 0.528204 | 1.3:-23293913 | None:intergenic |
| GGTTGAGTACTTCTATCCCT+TGG | 0.529205 | 1.3:+23293760 | MS.gene99526:CDS |
| CTACCTGTTCTGAACCCTCT+AGG | 0.529548 | 1.3:+23293833 | MS.gene99526:CDS |
| ACTGAAGCATATTTCTGCCC+AGG | 0.531572 | 1.3:+23291589 | MS.gene99526:CDS |
| CTGAAATCCCATACATGGGA+TGG | 0.532648 | 1.3:+23292171 | MS.gene99526:CDS |
| AAACTTTAAACCCATTAGCA+TGG | 0.532686 | 1.3:+23291266 | MS.gene99526:CDS |
| ACAAAACCACCACTCTCAGC+AGG | 0.533265 | 1.3:-23294731 | None:intergenic |
| TATCAACCTTATTCCAGCCA+AGG | 0.535936 | 1.3:-23293777 | None:intergenic |
| TGCTTGTGCTAATATGCAGT+TGG | 0.535959 | 1.3:+23294580 | MS.gene99526:CDS |
| ATGTGAGCATGGTGCTCACC+AGG | 0.537625 | 1.3:-23292123 | None:intergenic |
| GAGTTAGGTAAACGGTTTCG+AGG | 0.540103 | 1.3:-23291303 | None:intergenic |
| TTCCACATCGTACCTTTCAC+CGG | 0.543184 | 1.3:-23291335 | None:intergenic |
| TGGCAGACTGGGACTCCTGT+AGG | 0.544529 | 1.3:+23291515 | MS.gene99526:intron |
| TTCAAGCCATCAAAGACAAG+GGG | 0.551538 | 1.3:-23293131 | None:intergenic |
| GTAATAGAGCATTTCCACTT+CGG | 0.551983 | 1.3:+23294251 | MS.gene99526:CDS |
| TTAGTAGAACCCAACCTGGC+TGG | 0.552075 | 1.3:-23294403 | None:intergenic |
| TGCATAGCTTCAGACAAAGC+AGG | 0.554275 | 1.3:-23292438 | None:intergenic |
| AGTAAGTGATTCATCGTCTG+TGG | 0.554795 | 1.3:-23293924 | None:intergenic |
| TGTCTCAAACAAGACCAGCC+AGG | 0.555894 | 1.3:+23294389 | MS.gene99526:CDS |
| GTGGACATGAGTTAGGTAAA+CGG | 0.556772 | 1.3:-23291311 | None:intergenic |
| CTTCCAAGTGAGTCACCACT+TGG | 0.558326 | 1.3:-23292261 | None:intergenic |
| TGTTGAGTGTATTACTGAGT+TGG | 0.559184 | 1.3:+23292377 | MS.gene99526:CDS |
| ATCAACCTTATTCCAGCCAA+GGG | 0.563390 | 1.3:-23293776 | None:intergenic |
| AACACTATCAGCGACTGCAC+TGG | 0.566260 | 1.3:-23291395 | None:intergenic |
| CTCATGTCCACACCGGTGAA+AGG | 0.569357 | 1.3:+23291323 | MS.gene99526:CDS |
| TAGCAATCGAGAAAATCAAA+AGG | 0.570446 | 1.3:+23294201 | MS.gene99526:CDS |
| TCAAACAAGACCAGCCAGGT+TGG | 0.571127 | 1.3:+23294393 | MS.gene99526:CDS |
| GTTAGCTACAAGTGTTGCCA+TGG | 0.571157 | 1.3:+23294680 | MS.gene99526:CDS |
| TGCTTCAGTTTACGGATAGG+AGG | 0.575601 | 1.3:-23291575 | None:intergenic |
| AACTCCAACAGAAATTGTTG+AGG | 0.575818 | 1.3:+23293070 | MS.gene99526:CDS |
| GTTTAGGAGGAAGCATGTGT+TGG | 0.578541 | 1.3:+23293535 | MS.gene99526:CDS |
| AGATTACTGGAGGCGTAAGA+GGG | 0.582113 | 1.3:+23293040 | MS.gene99526:CDS |
| ATATGCTTCAGTTTACGGAT+AGG | 0.583335 | 1.3:-23291578 | None:intergenic |
| GCTCCTCCTGCTGAGAGTGG+TGG | 0.584351 | 1.3:+23294725 | MS.gene99526:CDS |
| AATGTGAAACTGCTCGGTCG+CGG | 0.586302 | 1.3:+23294437 | MS.gene99526:CDS |
| ATAGGATCAAGAATATCAGA+AGG | 0.591889 | 1.3:-23294611 | None:intergenic |
| GATCTTGTGGATCCCAATTG+TGG | 0.592782 | 1.3:+23293673 | MS.gene99526:CDS |
| TACTGTCCTGATTCAAACTG+TGG | 0.599493 | 1.3:+23294635 | MS.gene99526:CDS |
| CTTCTTCAATCCATCTACGC+TGG | 0.599801 | 1.3:+23293599 | MS.gene99526:CDS |
| TTAGCATCGAAGTGTTTAGG+AGG | 0.599845 | 1.3:+23293522 | MS.gene99526:CDS |
| TTCAAACTGTGGAAGAACAA+TGG | 0.600916 | 1.3:+23294646 | MS.gene99526:CDS |
| GCTAGAAATGCCATGGTATG+TGG | 0.603153 | 1.3:+23293739 | MS.gene99526:CDS |
| GGACCAAATGTGAAACTGCT+CGG | 0.603872 | 1.3:+23294431 | MS.gene99526:CDS |
| GGTTCACAATCCTACCTAGA+GGG | 0.606256 | 1.3:-23293847 | None:intergenic |
| CTGTTCTGAACCCTCTAGGT+AGG | 0.607740 | 1.3:+23293837 | MS.gene99526:CDS |
| GTCTGTGGGACGAAAAGGGA+AGG | 0.608345 | 1.3:-23293909 | None:intergenic |
| CAAACTGTTGTAATCAGCAA+TGG | 0.608903 | 1.3:-23292334 | None:intergenic |
| ACTTGAAGCTAGAAATGCCA+TGG | 0.609318 | 1.3:+23293732 | MS.gene99526:CDS |
| ACATTGTTGTCATGTGAGCA+TGG | 0.611775 | 1.3:-23292134 | None:intergenic |
| GTGTCAGCTTATAGCCAACA+AGG | 0.616261 | 1.3:+23291241 | MS.gene99526:CDS |
| TGTTCAAGCCATCAAAGACA+AGG | 0.620643 | 1.3:-23293133 | None:intergenic |
| TTGCTTAGTAGAACCCAACC+TGG | 0.620916 | 1.3:-23294407 | None:intergenic |
| GAAGCTCCTCCTGCTGAGAG+TGG | 0.621719 | 1.3:+23294722 | MS.gene99526:CDS |
| TAGGATCAAGAATATCAGAA+GGG | 0.639927 | 1.3:-23294610 | None:intergenic |
| GTAAGTGATTCATCGTCTGT+GGG | 0.641479 | 1.3:-23293923 | None:intergenic |
| CATCGTACCTTTCACCGGTG+TGG | 0.641644 | 1.3:-23291330 | None:intergenic |
| GTTCAAGCCATCAAAGACAA+GGG | 0.644512 | 1.3:-23293132 | None:intergenic |
| CGTTCTCGTGAGTATGACCA+TGG | 0.648414 | 1.3:-23294697 | None:intergenic |
| GGTTGGGTTCTACTAAGCAA+AGG | 0.652919 | 1.3:+23294410 | MS.gene99526:CDS |
| AAGTACTCAACCACATACCA+TGG | 0.655414 | 1.3:-23293749 | None:intergenic |
| CACCGGTGAAAGGTACGATG+TGG | 0.656165 | 1.3:+23291333 | MS.gene99526:CDS |
| CACCTAGTTCAAACACCAAG+TGG | 0.658165 | 1.3:+23292246 | MS.gene99526:CDS |
| TGGTTCACAATCCTACCTAG+AGG | 0.663403 | 1.3:-23293848 | None:intergenic |
| AAACCACCACTCTCAGCAGG+AGG | 0.667205 | 1.3:-23294728 | None:intergenic |
| GAATGTGAATCAGATTAAAG+GGG | 0.681348 | 1.3:+23294121 | MS.gene99526:intron |
| TACCTAACTCATGTCCACAC+CGG | 0.681654 | 1.3:+23291316 | MS.gene99526:CDS |
| TCAGCTGAAATCCCATACAT+GGG | 0.682027 | 1.3:+23292167 | MS.gene99526:CDS |
| ACATTCATCTTCATATACGG+AGG | 0.688432 | 1.3:+23294146 | MS.gene99526:CDS |
| GTGAGCTAGAAGATTACTGG+AGG | 0.704760 | 1.3:+23293030 | MS.gene99526:CDS |
| TCAAATGTATGCAACTGCTG+TGG | 0.727594 | 1.3:+23294463 | MS.gene99526:CDS |
| TCTATGCCAATCCAGAAACG+AGG | 0.741708 | 1.3:-23294296 | None:intergenic |
| TCAAGCCATCAAAGACAAGG+GGG | 0.746571 | 1.3:-23293130 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAATTAATGATATTAG+TGG | + | chr1.3:23292645-23292664 | MS.gene99526:intron | 10.0% |
| !! | AAAATATTGTATCATTTGTT+TGG | + | chr1.3:23291495-23291514 | MS.gene99526:intron | 15.0% |
| !! | AAATTGATATAAAAATTACC+TGG | - | chr1.3:23291610-23291629 | None:intergenic | 15.0% |
| !! | AATTGATATAAAAATTACCT+GGG | - | chr1.3:23291609-23291628 | None:intergenic | 15.0% |
| !! | ATAAAATAAAATGTACATGT+TGG | - | chr1.3:23291721-23291740 | None:intergenic | 15.0% |
| !! | CATTAATTCACAATTATATT+TGG | - | chr1.3:23291471-23291490 | None:intergenic | 15.0% |
| !! | TAAAAGGAACATATTATTAT+GGG | + | chr1.3:23291968-23291987 | MS.gene99526:intron | 15.0% |
| !! | TATCATTAATAGTTATCATT+AGG | - | chr1.3:23293212-23293231 | None:intergenic | 15.0% |
| !! | TATTTAGTGACAAAATATAT+TGG | - | chr1.3:23293372-23293391 | None:intergenic | 15.0% |
| !!! | ATTATATCTATTTTTGCTAA+AGG | + | chr1.3:23294028-23294047 | MS.gene99526:intron | 15.0% |
| !!! | TGAATTTTTAATGCATTATT+TGG | + | chr1.3:23292929-23292948 | MS.gene99526:intron | 15.0% |
| !!! | TTATATCTATTTTTGCTAAA+GGG | + | chr1.3:23294029-23294048 | MS.gene99526:intron | 15.0% |
| !! | AAATGATTTCACAAAGTAAA+CGG | - | chr1.3:23293442-23293461 | None:intergenic | 20.0% |
| !! | CTAAAAGGAACATATTATTA+TGG | + | chr1.3:23291967-23291986 | MS.gene99526:intron | 20.0% |
| !! | GCAAAAATGTATATGTATTT+AGG | - | chr1.3:23291808-23291827 | None:intergenic | 20.0% |
| !! | TAAAATTCAGATCATTGTAT+AGG | + | chr1.3:23291648-23291667 | MS.gene99526:intron | 20.0% |
| !! | TGCTTATATATTTATTCTAG+AGG | + | chr1.3:23291825-23291844 | MS.gene99526:intron | 20.0% |
| !! | TTATAAAGCATACAACATTA+TGG | + | chr1.3:23293415-23293434 | MS.gene99526:intron | 20.0% |
| !!! | AATGCATATGATTTTTGTTT+GGG | + | chr1.3:23293877-23293896 | MS.gene99526:CDS | 20.0% |
| !!! | CTTTATTTGCTTTTTTTAGT+GGG | + | chr1.3:23292894-23292913 | MS.gene99526:intron | 20.0% |
| !!! | CTTTTCAATGAATATTTGTT+TGG | + | chr1.3:23294075-23294094 | MS.gene99526:intron | 20.0% |
| !!! | TCTTTATTTGCTTTTTTTAG+TGG | + | chr1.3:23292893-23292912 | MS.gene99526:intron | 20.0% |
| ! | AAATCATATGCATTGCATTA+TGG | - | chr1.3:23293871-23293890 | None:intergenic | 25.0% |
| ! | CATTAGAATATGGAAATTTC+TGG | + | chr1.3:23292223-23292242 | MS.gene99526:CDS | 25.0% |
| ! | GCACACACATAAATTATAAT+CGG | - | chr1.3:23293001-23293020 | None:intergenic | 25.0% |
| ! | GTAATCTATGAGAAACTAAA+AGG | + | chr1.3:23291952-23291971 | MS.gene99526:intron | 25.0% |
| ! | TGAATGTGAATCAGATTAAA+GGG | + | chr1.3:23294120-23294139 | MS.gene99526:intron | 25.0% |
| ! | TTCCATTGTAAGCAAATTAA+AGG | + | chr1.3:23292808-23292827 | MS.gene99526:CDS | 25.0% |
| ! | TTGAAAATCAGTAGCAAAAT+CGG | + | chr1.3:23293334-23293353 | MS.gene99526:intron | 25.0% |
| ! | TTGCAAAATTTGTACTTACA+AGG | - | chr1.3:23294006-23294025 | None:intergenic | 25.0% |
| !! | AATCATCTTGATCTTCTTTT+TGG | + | chr1.3:23292513-23292532 | MS.gene99526:CDS | 25.0% |
| !! | CAATGCATATGATTTTTGTT+TGG | + | chr1.3:23293876-23293895 | MS.gene99526:CDS | 25.0% |
| !! | GGTTAGTTAATATTCAAATG+TGG | + | chr1.3:23293163-23293182 | MS.gene99526:intron | 25.0% |
| !!! | ATGCATATGATTTTTGTTTG+GGG | + | chr1.3:23293878-23293897 | MS.gene99526:CDS | 25.0% |
| !!! | GTTTTCATGAACTTTTTTCA+GGG | + | chr1.3:23292745-23292764 | MS.gene99526:intron | 25.0% |
| !!! | TGTTTTCATGAACTTTTTTC+AGG | + | chr1.3:23292744-23292763 | MS.gene99526:intron | 25.0% |
| AAAACCTCAACAATTTCTGT+TGG | - | chr1.3:23293077-23293096 | None:intergenic | 30.0% | |
| AAACTTTAAACCCATTAGCA+TGG | + | chr1.3:23291266-23291285 | MS.gene99526:CDS | 30.0% | |
| AAGAAGATTTCAAGATCTTG+TGG | + | chr1.3:23293660-23293679 | MS.gene99526:CDS | 30.0% | |
| AATGATATTAGTGGTCAAAG+TGG | + | chr1.3:23292654-23292673 | MS.gene99526:intron | 30.0% | |
| AATTAAAGGCTCATCTTACA+AGG | + | chr1.3:23292822-23292841 | MS.gene99526:CDS | 30.0% | |
| AATTTGTACTTACAAGGTCT+TGG | - | chr1.3:23294000-23294019 | None:intergenic | 30.0% | |
| ACACTCTCATGAATATTACT+CGG | - | chr1.3:23292727-23292746 | None:intergenic | 30.0% | |
| AGTTACGAAAAGATATTCCA+AGG | - | chr1.3:23292560-23292579 | None:intergenic | 30.0% | |
| ATAGGATCAAGAATATCAGA+AGG | - | chr1.3:23294614-23294633 | None:intergenic | 30.0% | |
| ATGAATCACTTACTCAAAAG+TGG | + | chr1.3:23293933-23293952 | MS.gene99526:CDS | 30.0% | |
| CAGAAATATGCTTCAGTTTA+CGG | - | chr1.3:23291586-23291605 | None:intergenic | 30.0% | |
| CCAAATACATGTATACAAGT+TGG | - | chr1.3:23291775-23291794 | None:intergenic | 30.0% | |
| CCAACTTGTATACATGTATT+TGG | + | chr1.3:23291772-23291791 | MS.gene99526:intron | 30.0% | |
| GAATGTGAATCAGATTAAAG+GGG | + | chr1.3:23294121-23294140 | MS.gene99526:intron | 30.0% | |
| GACACATTCATCTTCATATA+CGG | + | chr1.3:23294143-23294162 | MS.gene99526:CDS | 30.0% | |
| GTGAATGTGAATCAGATTAA+AGG | + | chr1.3:23294119-23294138 | MS.gene99526:intron | 30.0% | |
| TAGCAATCGAGAAAATCAAA+AGG | + | chr1.3:23294201-23294220 | MS.gene99526:CDS | 30.0% | |
| TAGGATCAAGAATATCAGAA+GGG | - | chr1.3:23294613-23294632 | None:intergenic | 30.0% | |
| TTCTCATAGATTACTTCCAA+CGG | - | chr1.3:23291946-23291965 | None:intergenic | 30.0% | |
| TTGGAAAAGCTTTCAACAAA+AGG | + | chr1.3:23292396-23292415 | MS.gene99526:CDS | 30.0% | |
| TTTGAATCAGGACAGTAAAT+AGG | - | chr1.3:23294632-23294651 | None:intergenic | 30.0% | |
| ! | AAATTCAGCTTTGTGAAGTA+GGG | - | chr1.3:23293708-23293727 | None:intergenic | 30.0% |
| ! | GCTGCATTTTCATTAGAATA+TGG | + | chr1.3:23292213-23292232 | MS.gene99526:CDS | 30.0% |
| ! | TGGTGTATTGACATATAGTA+AGG | + | chr1.3:23292674-23292693 | MS.gene99526:intron | 30.0% |
| !! | AGAAATTGTTGAGGTTTTGA+AGG | + | chr1.3:23293079-23293098 | MS.gene99526:CDS | 30.0% |
| !! | AGCCTTTAATTTGCTTACAA+TGG | - | chr1.3:23292813-23292832 | None:intergenic | 30.0% |
| !! | GGTTAATGTGTCGATTAATA+TGG | + | chr1.3:23292695-23292714 | MS.gene99526:intron | 30.0% |
| !! | GGTTTAAAGTTTTTCCTTGT+TGG | - | chr1.3:23291258-23291277 | None:intergenic | 30.0% |
| !! | GTTTTGTTCAGATTGAGAAA+AGG | + | chr1.3:23294747-23294766 | MS.gene99526:CDS | 30.0% |
| !!! | CTTTTAAGGAGTATTATGAG+AGG | + | chr1.3:23294537-23294556 | MS.gene99526:CDS | 30.0% |
| !!! | CTTTTGATTTCATCGATTGT+TGG | - | chr1.3:23294362-23294381 | None:intergenic | 30.0% |
| !!! | TCAAAAGTGGAATTGGTTTT+GGG | + | chr1.3:23293946-23293965 | MS.gene99526:CDS | 30.0% |
| !!! | TGGTTTTGATGTTGCTTTTA+AGG | + | chr1.3:23294523-23294542 | MS.gene99526:CDS | 30.0% |
| AACTCCAACAGAAATTGTTG+AGG | + | chr1.3:23293070-23293089 | MS.gene99526:CDS | 35.0% | |
| AATTTCCGCGTTAATTCAAC+AGG | + | chr1.3:23293499-23293518 | MS.gene99526:intron | 35.0% | |
| ACATTCATCTTCATATACGG+AGG | + | chr1.3:23294146-23294165 | MS.gene99526:CDS | 35.0% | |
| AGTCTTCCACAATGAAATTC+AGG | + | chr1.3:23293106-23293125 | MS.gene99526:CDS | 35.0% | |
| ATATGCTTCAGTTTACGGAT+AGG | - | chr1.3:23291581-23291600 | None:intergenic | 35.0% | |
| ATTAACGCGGAAATTAGAGA+CGG | - | chr1.3:23293494-23293513 | None:intergenic | 35.0% | |
| ATTGTTAGCGACCAATATAG+CGG | - | chr1.3:23293247-23293266 | None:intergenic | 35.0% | |
| CAAACTGTTGTAATCAGCAA+TGG | - | chr1.3:23292337-23292356 | None:intergenic | 35.0% | |
| CACTTACTCAAAAGTGGAAT+TGG | + | chr1.3:23293939-23293958 | MS.gene99526:CDS | 35.0% | |
| GAAGAACCAAGAGAACTAAA+AGG | + | chr1.3:23293629-23293648 | MS.gene99526:CDS | 35.0% | |
| GTTGTGAGAAATGTATACCT+TGG | - | chr1.3:23291425-23291444 | None:intergenic | 35.0% | |
| TATCATCACTCCATGCTAAT+GGG | - | chr1.3:23291279-23291298 | None:intergenic | 35.0% | |
| TATCATTTGTTTGGCAGACT+GGG | + | chr1.3:23291504-23291523 | MS.gene99526:intron | 35.0% | |
| TCGTAAGTACTTTGATTCCT+TGG | + | chr1.3:23292540-23292559 | MS.gene99526:intron | 35.0% | |
| TCTAACCAAGACTTGAATCT+CGG | + | chr1.3:23291870-23291889 | MS.gene99526:intron | 35.0% | |
| TGTTGAGTGTATTACTGAGT+TGG | + | chr1.3:23292377-23292396 | MS.gene99526:CDS | 35.0% | |
| TTATCATCACTCCATGCTAA+TGG | - | chr1.3:23291280-23291299 | None:intergenic | 35.0% | |
| TTCAAACTGTGGAAGAACAA+TGG | + | chr1.3:23294646-23294665 | MS.gene99526:CDS | 35.0% | |
| TTTATGTGTGTGCATATTGC+AGG | + | chr1.3:23293008-23293027 | MS.gene99526:intron | 35.0% | |
| ! | CAAAGTCATGTGTCCATTTT+GGG | - | chr1.3:23294178-23294197 | None:intergenic | 35.0% |
| ! | CAAATTCAGCTTTGTGAAGT+AGG | - | chr1.3:23293709-23293728 | None:intergenic | 35.0% |
| ! | CATGTGTTGGTATTCATTTC+AGG | + | chr1.3:23293548-23293567 | MS.gene99526:CDS | 35.0% |
| ! | CATTGCTGATTACAACAGTT+TGG | + | chr1.3:23292335-23292354 | MS.gene99526:CDS | 35.0% |
| ! | CTATTACTGCATCAGCTTTT+CGG | - | chr1.3:23294238-23294257 | None:intergenic | 35.0% |
| ! | GTAATAGAGCATTTCCACTT+CGG | + | chr1.3:23294251-23294270 | MS.gene99526:CDS | 35.0% |
| ! | TATTACTGCATCAGCTTTTC+GGG | - | chr1.3:23294237-23294256 | None:intergenic | 35.0% |
| ! | TCTTTTCGACACTTTGAACA+CGG | - | chr1.3:23292305-23292324 | None:intergenic | 35.0% |
| ! | TTTTGTCTTCTTTTCCGAAG+TGG | - | chr1.3:23294268-23294287 | None:intergenic | 35.0% |
| !! | AGATTCCTGTTGCTGTTTAT+TGG | + | chr1.3:23292463-23292482 | MS.gene99526:CDS | 35.0% |
| !! | CTCAAAAGTGGAATTGGTTT+TGG | + | chr1.3:23293945-23293964 | MS.gene99526:CDS | 35.0% |
| !! | GATTCCTGTTGCTGTTTATT+GGG | + | chr1.3:23292464-23292483 | MS.gene99526:CDS | 35.0% |
| !!! | CTGTATCCTTTTAGTTCTCT+TGG | - | chr1.3:23293638-23293657 | None:intergenic | 35.0% |
| !!! | GAACTTTTTTCAGGGATGAT+AGG | + | chr1.3:23292753-23292772 | MS.gene99526:intron | 35.0% |
| AAAGAATCGTTCCTCGTTTC+TGG | + | chr1.3:23294285-23294304 | MS.gene99526:CDS | 40.0% | |
| AAGTACTCAACCACATACCA+TGG | - | chr1.3:23293752-23293771 | None:intergenic | 40.0% | |
| ACATTACTTGCAAGTGAAGC+TGG | - | chr1.3:23291223-23291242 | None:intergenic | 40.0% | |
| ACATTGTTGTCATGTGAGCA+TGG | - | chr1.3:23292137-23292156 | None:intergenic | 40.0% | |
| ACTTGAAGCTAGAAATGCCA+TGG | + | chr1.3:23293732-23293751 | MS.gene99526:CDS | 40.0% | |
| AGACTTGAATCTCGGCTAAA+AGG | + | chr1.3:23291878-23291897 | MS.gene99526:intron | 40.0% | |
| AGTAAGTGATTCATCGTCTG+TGG | - | chr1.3:23293927-23293946 | None:intergenic | 40.0% | |
| ATAGCCCAATAAACAGCAAC+AGG | - | chr1.3:23292471-23292490 | None:intergenic | 40.0% | |
| ATCAACCTTATTCCAGCCAA+GGG | - | chr1.3:23293779-23293798 | None:intergenic | 40.0% | |
| ATCAGCTGAAATCCCATACA+TGG | + | chr1.3:23292166-23292185 | MS.gene99526:CDS | 40.0% | |
| GACTGAATTGTCCGCTATAT+TGG | + | chr1.3:23293233-23293252 | MS.gene99526:intron | 40.0% | |
| GCTAACCTGTTGAATTAACG+CGG | - | chr1.3:23293507-23293526 | None:intergenic | 40.0% | |
| GTAAGTGATTCATCGTCTGT+GGG | - | chr1.3:23293926-23293945 | None:intergenic | 40.0% | |
| GTATCATTTGTTTGGCAGAC+TGG | + | chr1.3:23291503-23291522 | MS.gene99526:intron | 40.0% | |
| GTGGACATGAGTTAGGTAAA+CGG | - | chr1.3:23291314-23291333 | None:intergenic | 40.0% | |
| GTTCAAGCCATCAAAGACAA+GGG | - | chr1.3:23293135-23293154 | None:intergenic | 40.0% | |
| GTTCTTCCACAGTTTGAATC+AGG | - | chr1.3:23294644-23294663 | None:intergenic | 40.0% | |
| TACTGTCCTGATTCAAACTG+TGG | + | chr1.3:23294635-23294654 | MS.gene99526:CDS | 40.0% | |
| TAGCAAAATCGGTTGCTAGA+GGG | + | chr1.3:23293345-23293364 | MS.gene99526:intron | 40.0% | |
| TATCAACCTTATTCCAGCCA+AGG | - | chr1.3:23293780-23293799 | None:intergenic | 40.0% | |
| TCAAATGTATGCAACTGCTG+TGG | + | chr1.3:23294463-23294482 | MS.gene99526:CDS | 40.0% | |
| TCAGCTGAAATCCCATACAT+GGG | + | chr1.3:23292167-23292186 | MS.gene99526:CDS | 40.0% | |
| TCATAGATTACTTCCAACGG+AGG | - | chr1.3:23291943-23291962 | None:intergenic | 40.0% | |
| TGATGGCTTGAACAGACAAA+TGG | + | chr1.3:23293142-23293161 | MS.gene99526:CDS | 40.0% | |
| TGCAATAAGATTACCTCCGT+TGG | + | chr1.3:23291927-23291946 | MS.gene99526:intron | 40.0% | |
| TGCATATTAGCACAAGCAAC+AGG | - | chr1.3:23294578-23294597 | None:intergenic | 40.0% | |
| TGCTTGTGCTAATATGCAGT+TGG | + | chr1.3:23294580-23294599 | MS.gene99526:CDS | 40.0% | |
| TGTTCAAGCCATCAAAGACA+AGG | - | chr1.3:23293136-23293155 | None:intergenic | 40.0% | |
| TTCAAGCCATCAAAGACAAG+GGG | - | chr1.3:23293134-23293153 | None:intergenic | 40.0% | |
| TTTAGCCGAGATTCAAGTCT+TGG | - | chr1.3:23291878-23291897 | None:intergenic | 40.0% | |
| ! | ACAAGGAGCAGAAAGCATAT+AGG | + | chr1.3:23292839-23292858 | MS.gene99526:CDS | 40.0% |
| ! | AGGTTAGCATCGAAGTGTTT+AGG | + | chr1.3:23293519-23293538 | MS.gene99526:intron | 40.0% |
| ! | GCAAAGTCATGTGTCCATTT+TGG | - | chr1.3:23294179-23294198 | None:intergenic | 40.0% |
| ! | TGCTTTTCCATCCCATGTAT+GGG | - | chr1.3:23292181-23292200 | None:intergenic | 40.0% |
| ! | TTAGCATCGAAGTGTTTAGG+AGG | + | chr1.3:23293522-23293541 | MS.gene99526:CDS | 40.0% |
| !! | GAAAAAGTGCTTGAGAAAGC+TGG | + | chr1.3:23294503-23294522 | MS.gene99526:CDS | 40.0% |
| !! | GTTTTGGGCTGAAATGAAGA+AGG | + | chr1.3:23293961-23293980 | MS.gene99526:CDS | 40.0% |
| !! | TTGCTTTTCCATCCCATGTA+TGG | - | chr1.3:23292182-23292201 | None:intergenic | 40.0% |
| !!! | CTGCTGTGGATTTTGAGATA+TGG | + | chr1.3:23294477-23294496 | MS.gene99526:CDS | 40.0% |
| AGGAGGCTCATAACCAGATA+AGG | - | chr1.3:23291561-23291580 | None:intergenic | 45.0% | |
| AGGGTCCAATCATCCACAAT+TGG | - | chr1.3:23293689-23293708 | None:intergenic | 45.0% | |
| CACCTAGTTCAAACACCAAG+TGG | + | chr1.3:23292246-23292265 | MS.gene99526:CDS | 45.0% | |
| CAGGTGAGCTAGAAGATTAC+TGG | + | chr1.3:23293027-23293046 | MS.gene99526:intron | 45.0% | |
| CTGAAATCCCATACATGGGA+TGG | + | chr1.3:23292171-23292190 | MS.gene99526:CDS | 45.0% | |
| CTGTCTTCTACAAGACCTAC+AGG | - | chr1.3:23291533-23291552 | None:intergenic | 45.0% | |
| CTTACAAGGTCTTGGAGTCT+TGG | - | chr1.3:23293992-23294011 | None:intergenic | 45.0% | |
| CTTCTTCAATCCATCTACGC+TGG | + | chr1.3:23293599-23293618 | MS.gene99526:CDS | 45.0% | |
| GAAGACAGACTTCCCTTATC+TGG | + | chr1.3:23291545-23291564 | MS.gene99526:CDS | 45.0% | |
| GAGTTAGGTAAACGGTTTCG+AGG | - | chr1.3:23291306-23291325 | None:intergenic | 45.0% | |
| GATCTTGTGGATCCCAATTG+TGG | + | chr1.3:23293673-23293692 | MS.gene99526:CDS | 45.0% | |
| GCTAGAAATGCCATGGTATG+TGG | + | chr1.3:23293739-23293758 | MS.gene99526:CDS | 45.0% | |
| GGACCAAATGTGAAACTGCT+CGG | + | chr1.3:23294431-23294450 | MS.gene99526:CDS | 45.0% | |
| GGAGGCTCATAACCAGATAA+GGG | - | chr1.3:23291560-23291579 | None:intergenic | 45.0% | |
| GGATCCCAATTGTGGATGAT+TGG | + | chr1.3:23293681-23293700 | MS.gene99526:CDS | 45.0% | |
| GGGTCCAATCATCCACAATT+GGG | - | chr1.3:23293688-23293707 | None:intergenic | 45.0% | |
| GGGTTCAGAACAGGTAGAAT+TGG | - | chr1.3:23293830-23293849 | None:intergenic | 45.0% | |
| GGTTCACAATCCTACCTAGA+GGG | - | chr1.3:23293850-23293869 | None:intergenic | 45.0% | |
| GGTTGAGTACTTCTATCCCT+TGG | + | chr1.3:23293760-23293779 | MS.gene99526:CDS | 45.0% | |
| GGTTGGGTTCTACTAAGCAA+AGG | + | chr1.3:23294410-23294429 | MS.gene99526:CDS | 45.0% | |
| GTAGCAAAATCGGTTGCTAG+AGG | + | chr1.3:23293344-23293363 | MS.gene99526:intron | 45.0% | |
| GTGAGCTAGAAGATTACTGG+AGG | + | chr1.3:23293030-23293049 | MS.gene99526:CDS | 45.0% | |
| GTGTCAGCTTATAGCCAACA+AGG | + | chr1.3:23291241-23291260 | MS.gene99526:CDS | 45.0% | |
| TACCTAACTCATGTCCACAC+CGG | + | chr1.3:23291316-23291335 | MS.gene99526:CDS | 45.0% | |
| TAGATGATGAGCACACTTCC+TGG | + | chr1.3:23292105-23292124 | MS.gene99526:intron | 45.0% | |
| TCAAGCCATCAAAGACAAGG+GGG | - | chr1.3:23293133-23293152 | None:intergenic | 45.0% | |
| TCTATCCCTTGGCTGGAATA+AGG | + | chr1.3:23293771-23293790 | MS.gene99526:CDS | 45.0% | |
| TCTATGCCAATCCAGAAACG+AGG | - | chr1.3:23294299-23294318 | None:intergenic | 45.0% | |
| TCTCGTCTCTTATGCTGTCT+AGG | - | chr1.3:23293574-23293593 | None:intergenic | 45.0% | |
| TGCATAGCTTCAGACAAAGC+AGG | - | chr1.3:23292441-23292460 | None:intergenic | 45.0% | |
| TGCTTCAGTTTACGGATAGG+AGG | - | chr1.3:23291578-23291597 | None:intergenic | 45.0% | |
| TGGTTCACAATCCTACCTAG+AGG | - | chr1.3:23293851-23293870 | None:intergenic | 45.0% | |
| TTCCACATCGTACCTTTCAC+CGG | - | chr1.3:23291338-23291357 | None:intergenic | 45.0% | |
| TTCTTGTAGTCCAGCGTAGA+TGG | - | chr1.3:23293612-23293631 | None:intergenic | 45.0% | |
| TTGCTTAGTAGAACCCAACC+TGG | - | chr1.3:23294410-23294429 | None:intergenic | 45.0% | |
| ! | AAGATTACTGGAGGCGTAAG+AGG | + | chr1.3:23293039-23293058 | MS.gene99526:CDS | 45.0% |
| ! | ACTGAAGCATATTTCTGCCC+AGG | + | chr1.3:23291589-23291608 | MS.gene99526:CDS | 45.0% |
| ! | AGATTACTGGAGGCGTAAGA+GGG | + | chr1.3:23293040-23293059 | MS.gene99526:CDS | 45.0% |
| ! | ATCGTTCCTCGTTTCTGGAT+TGG | + | chr1.3:23294290-23294309 | MS.gene99526:CDS | 45.0% |
| ! | GTTAGCTACAAGTGTTGCCA+TGG | + | chr1.3:23294680-23294699 | MS.gene99526:CDS | 45.0% |
| ! | GTTTAGGAGGAAGCATGTGT+TGG | + | chr1.3:23293535-23293554 | MS.gene99526:CDS | 45.0% |
| !! | CACCACTTGGTGTTTGAACT+AGG | - | chr1.3:23292251-23292270 | None:intergenic | 45.0% |
| !! | AAAAATTAAAAAATTAACTT+AGG | + | chr1.3:23292018-23292037 | MS.gene99526:intron | 5.0% |
| !! | TAATATCATTAATTATATAT+CGG | - | chr1.3:23292644-23292663 | None:intergenic | 5.0% |
| AACACTATCAGCGACTGCAC+TGG | - | chr1.3:23291398-23291417 | None:intergenic | 50.0% | |
| AATGTGAAACTGCTCGGTCG+CGG | + | chr1.3:23294437-23294456 | MS.gene99526:CDS | 50.0% | |
| ACAAAACCACCACTCTCAGC+AGG | - | chr1.3:23294734-23294753 | None:intergenic | 50.0% | |
| ACACCAAGTGGTGACTCACT+TGG | + | chr1.3:23292258-23292277 | MS.gene99526:CDS | 50.0% | |
| ACGGAGGAACAGACCCAAAA+TGG | + | chr1.3:23294162-23294181 | MS.gene99526:CDS | 50.0% | |
| CAAACAAGACCAGCCAGGTT+GGG | + | chr1.3:23294394-23294413 | MS.gene99526:CDS | 50.0% | |
| CATCGTCTGTGGGACGAAAA+GGG | - | chr1.3:23293916-23293935 | None:intergenic | 50.0% | |
| CGACCGAGCAGTTTCACATT+TGG | - | chr1.3:23294437-23294456 | None:intergenic | 50.0% | |
| CGTTCTCGTGAGTATGACCA+TGG | - | chr1.3:23294700-23294719 | None:intergenic | 50.0% | |
| CTACCTAGAGGGTTCAGAAC+AGG | - | chr1.3:23293839-23293858 | None:intergenic | 50.0% | |
| CTTCCAAGTGAGTCACCACT+TGG | - | chr1.3:23292264-23292283 | None:intergenic | 50.0% | |
| GAGTACTTCTATCCCTTGGC+TGG | + | chr1.3:23293764-23293783 | MS.gene99526:CDS | 50.0% | |
| GGGGGTCCTGAATTTCATTG+TGG | - | chr1.3:23293115-23293134 | None:intergenic | 50.0% | |
| TCAAACAAGACCAGCCAGGT+TGG | + | chr1.3:23294393-23294412 | MS.gene99526:CDS | 50.0% | |
| TCATCGTCTGTGGGACGAAA+AGG | - | chr1.3:23293917-23293936 | None:intergenic | 50.0% | |
| TGTCTCAAACAAGACCAGCC+AGG | + | chr1.3:23294389-23294408 | MS.gene99526:CDS | 50.0% | |
| TTAGTAGAACCCAACCTGGC+TGG | - | chr1.3:23294406-23294425 | None:intergenic | 50.0% | |
| ! | CGCTGATAGTGTTGCATCCA+AGG | + | chr1.3:23291405-23291424 | MS.gene99526:CDS | 50.0% |
| ! | CTACCTGTTCTGAACCCTCT+AGG | + | chr1.3:23293833-23293852 | MS.gene99526:CDS | 50.0% |
| ! | CTGTTCTGAACCCTCTAGGT+AGG | + | chr1.3:23293837-23293856 | MS.gene99526:CDS | 50.0% |
| AAACCACCACTCTCAGCAGG+AGG | - | chr1.3:23294731-23294750 | None:intergenic | 55.0% | |
| ATGTGAGCATGGTGCTCACC+AGG | - | chr1.3:23292126-23292145 | None:intergenic | 55.0% | |
| CACCGGTGTGGACATGAGTT+AGG | - | chr1.3:23291321-23291340 | None:intergenic | 55.0% | |
| CAGGACCCCCTTGTCTTTGA+TGG | + | chr1.3:23293125-23293144 | MS.gene99526:CDS | 55.0% | |
| CATCGTACCTTTCACCGGTG+TGG | - | chr1.3:23291333-23291352 | None:intergenic | 55.0% | |
| CTCATGTCCACACCGGTGAA+AGG | + | chr1.3:23291323-23291342 | MS.gene99526:CDS | 55.0% | |
| GTCTGTGGGACGAAAAGGGA+AGG | - | chr1.3:23293912-23293931 | None:intergenic | 55.0% | |
| ! | CACCGGTGAAAGGTACGATG+TGG | + | chr1.3:23291333-23291352 | MS.gene99526:CDS | 55.0% |
| GAAGCTCCTCCTGCTGAGAG+TGG | + | chr1.3:23294722-23294741 | MS.gene99526:CDS | 60.0% | |
| TGGCAGACTGGGACTCCTGT+AGG | + | chr1.3:23291515-23291534 | MS.gene99526:intron | 60.0% | |
| GCTCCTCCTGCTGAGAGTGG+TGG | + | chr1.3:23294725-23294744 | MS.gene99526:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 23291202 | 23294775 | 23291202 | ID=MS.gene99526 |
| chr1.3 | mRNA | 23291202 | 23294775 | 23291202 | ID=MS.gene99526.t1;Parent=MS.gene99526 |
| chr1.3 | exon | 23291202 | 23291426 | 23291202 | ID=MS.gene99526.t1.exon1;Parent=MS.gene99526.t1 |
| chr1.3 | CDS | 23291202 | 23291426 | 23291202 | ID=cds.MS.gene99526.t1;Parent=MS.gene99526.t1 |
| chr1.3 | exon | 23291521 | 23291610 | 23291521 | ID=MS.gene99526.t1.exon2;Parent=MS.gene99526.t1 |
| chr1.3 | CDS | 23291521 | 23291610 | 23291521 | ID=cds.MS.gene99526.t1;Parent=MS.gene99526.t1 |
| chr1.3 | exon | 23292108 | 23292541 | 23292108 | ID=MS.gene99526.t1.exon3;Parent=MS.gene99526.t1 |
| chr1.3 | CDS | 23292108 | 23292541 | 23292108 | ID=cds.MS.gene99526.t1;Parent=MS.gene99526.t1 |
| chr1.3 | exon | 23292766 | 23292860 | 23292766 | ID=MS.gene99526.t1.exon4;Parent=MS.gene99526.t1 |
| chr1.3 | CDS | 23292766 | 23292860 | 23292766 | ID=cds.MS.gene99526.t1;Parent=MS.gene99526.t1 |
| chr1.3 | exon | 23293030 | 23293163 | 23293030 | ID=MS.gene99526.t1.exon5;Parent=MS.gene99526.t1 |
| chr1.3 | CDS | 23293030 | 23293163 | 23293030 | ID=cds.MS.gene99526.t1;Parent=MS.gene99526.t1 |
| chr1.3 | exon | 23293521 | 23294006 | 23293521 | ID=MS.gene99526.t1.exon6;Parent=MS.gene99526.t1 |
| chr1.3 | CDS | 23293521 | 23294006 | 23293521 | ID=cds.MS.gene99526.t1;Parent=MS.gene99526.t1 |
| chr1.3 | exon | 23294134 | 23294775 | 23294134 | ID=MS.gene99526.t1.exon7;Parent=MS.gene99526.t1 |
| chr1.3 | CDS | 23294134 | 23294775 | 23294134 | ID=cds.MS.gene99526.t1;Parent=MS.gene99526.t1 |
| Gene Sequence |
| Protein sequence |
