AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06079

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06079.t1 MTR_8g099550 99.508 610 3 0 1 610 1 610 0.0 1248
MS.gene06079.t1 MTR_5g009150 89.853 611 61 1 1 610 1 611 0.0 1152
MS.gene06079.t1 MTR_8g027675 83.553 608 99 1 1 608 1 607 0.0 1077
MS.gene06079.t1 MTR_4g098920 67.541 610 193 2 1 609 1 606 0.0 897
MS.gene06079.t1 MTR_8g105580 66.505 618 191 4 1 608 4 615 0.0 890
MS.gene06079.t1 MTR_7g451010 67.974 612 192 2 1 608 4 615 0.0 887
MS.gene06079.t1 MTR_8g009510 66.139 632 190 2 1 608 4 635 0.0 887
MS.gene06079.t1 MTR_1g032550 67.047 613 195 2 1 608 4 614 0.0 887
MS.gene06079.t1 MTR_8g105580 67.474 578 172 4 1 568 4 575 0.0 840
MS.gene06079.t1 MTR_8g009510 65.465 527 161 1 103 608 2 528 0.0 734
MS.gene06079.t1 MTR_2g009690 39.596 495 278 6 4 489 24 506 6.61e-106 338
MS.gene06079.t1 MTR_4g093750 38.742 493 281 5 4 487 15 495 9.74e-101 322
MS.gene06079.t1 MTR_4g093750 38.259 494 286 4 4 488 15 498 4.56e-100 321
MS.gene06079.t1 MTR_4g030140 29.808 520 318 12 1 495 4 501 1.48e-58 211
MS.gene06079.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.86e-58 208
MS.gene06079.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 1.24e-57 208
MS.gene06079.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.47e-57 207
MS.gene06079.t1 MTR_4g134680 33.333 201 134 0 295 495 1 201 1.12e-32 133
MS.gene06079.t1 MTR_8g087770 42.632 190 99 3 34 219 68 251 4.84e-32 132
MS.gene06079.t1 MTR_8g087750 33.546 313 190 8 34 340 71 371 8.30e-31 128
MS.gene06079.t1 MTR_8g463270 26.331 338 217 6 9 326 31 356 1.25e-18 90.5
MS.gene06079.t1 MTR_4g094300 27.723 202 135 5 21 214 28 226 1.43e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06079.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene06079.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene06079.t1 AT5G42080 85.902 610 80 1 1 610 1 604 0.0 1107
MS.gene06079.t1 AT3G61760 82.651 611 104 2 1 610 1 610 0.0 1071
MS.gene06079.t1 AT3G61760 83.831 569 90 2 1 568 1 568 0.0 1010
MS.gene06079.t1 AT3G60190 67.690 619 189 2 1 608 4 622 0.0 910
MS.gene06079.t1 AT1G14830 68.791 612 185 3 1 608 4 613 0.0 907
MS.gene06079.t1 AT2G44590 63.948 613 217 3 1 610 1 612 0.0 852
MS.gene06079.t1 AT2G44590 61.375 611 215 4 1 608 1 593 0.0 808
MS.gene06079.t1 AT2G44590 61.275 612 215 5 1 608 1 594 0.0 804
MS.gene06079.t1 AT5G42080 88.345 429 50 0 1 429 1 429 0.0 804
MS.gene06079.t1 AT3G61760 84.270 445 68 2 1 444 1 444 0.0 795
MS.gene06079.t1 AT2G14120 36.273 499 293 7 3 487 20 507 1.35e-93 304
MS.gene06079.t1 AT2G14120 36.128 501 295 7 3 489 20 509 4.15e-93 303
MS.gene06079.t1 AT2G14120 36.273 499 293 7 3 487 20 507 4.51e-93 303
MS.gene06079.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.23e-92 303
MS.gene06079.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.36e-92 303
MS.gene06079.t1 AT2G14120 34.659 528 291 9 3 487 20 536 9.88e-89 293
MS.gene06079.t1 AT1G59610 30.561 517 315 14 1 495 4 498 1.22e-61 220
MS.gene06079.t1 AT1G10290 30.250 519 314 13 1 495 4 498 8.56e-61 218
MS.gene06079.t1 AT1G60500 29.810 473 284 14 34 483 65 512 2.37e-39 154
MS.gene06079.t1 AT1G60530 46.524 187 96 3 34 219 62 245 3.09e-39 146
MS.gene06079.t1 AT1G53140 31.651 218 120 5 9 214 47 247 1.77e-18 90.1

Find 150 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGTTCATTCGCTATTAA+AGG 0.155423 4.1:-4527209 MS.gene06079:intron
AGGAAAAGATTCACCGATTT+TGG 0.158213 4.1:-4531498 MS.gene06079:intron
GCAGCCGAACTGTATAATTT+TGG 0.190369 4.1:-4529811 MS.gene06079:intron
GAATGAGGATCCTGCAATTA+TGG 0.256115 4.1:-4525107 MS.gene06079:CDS
AAGCCTGTTGCAGCTGATGC+TGG 0.280429 4.1:-4528192 MS.gene06079:CDS
TGAAACCGAACTGGCTCGTT+TGG 0.280984 4.1:-4528217 MS.gene06079:CDS
CTGGTTTACGGGCTGAGGTT+GGG 0.283613 4.1:-4525918 MS.gene06079:CDS
GTCGTTGGTGGCCAGAGTTC+TGG 0.296472 4.1:-4531738 MS.gene06079:CDS
TTAGCTAGGTGTTTATATTC+AGG 0.300523 4.1:+4528463 None:intergenic
CTAAGGCGGTGCAAGCTCTT+TGG 0.312942 4.1:+4531820 None:intergenic
TTTGACGAAGATTGATCTAA+TGG 0.319005 4.1:-4529445 MS.gene06079:CDS
ATCTGACGGTTGATTTCTTT+CGG 0.331884 4.1:-4525813 MS.gene06079:CDS
TGAAGCAATACCCTGGTTTA+CGG 0.336223 4.1:-4525930 MS.gene06079:CDS
CAGAATGGGGTCTGAGCATC+TGG 0.343447 4.1:-4528440 MS.gene06079:CDS
TAGTGCACTCCCTACTCTTT+GGG 0.348707 4.1:-4531781 MS.gene06079:CDS
CTAGTGCACTCCCTACTCTT+TGG 0.351916 4.1:-4531782 MS.gene06079:CDS
GATATAATGATTCTTATCTA+AGG 0.354606 4.1:-4525735 MS.gene06079:CDS
AGGGACAGTTGAAATTTGTT+TGG 0.356007 4.1:+4531155 None:intergenic
GAATATATGCTAAGATGAAT+AGG 0.359659 4.1:+4531135 None:intergenic
TGTGCATGACATTGAGAATA+TGG 0.365705 4.1:-4530689 MS.gene06079:CDS
GCATCAACAGCTGCCTCGGC+AGG 0.374032 4.1:+4527550 None:intergenic
AGCTTTCAATGGAAAATATA+AGG 0.374495 4.1:-4527672 MS.gene06079:CDS
AGACTGAATGCCTGGAATCT+TGG 0.385851 4.1:+4528266 None:intergenic
TTGACACTCATCGATCTTCC+TGG 0.386900 4.1:-4530864 MS.gene06079:CDS
TGGTTTACGGGCTGAGGTTG+GGG 0.387468 4.1:-4525917 MS.gene06079:CDS
GAAGCAATACCCTGGTTTAC+GGG 0.387693 4.1:-4525929 MS.gene06079:CDS
CCTGGTTTACGGGCTGAGGT+TGG 0.394247 4.1:-4525919 MS.gene06079:CDS
AACTGCATCTATTTCAGCTT+GGG 0.397169 4.1:+4525039 None:intergenic
AAAAGAAAAGTTACCAAAAT+CGG 0.399826 4.1:+4531485 None:intergenic
AATCCACTCTAGTTACAATC+AGG 0.400990 4.1:-4527576 MS.gene06079:CDS
GTTTGACAAGCAGCTTTCAA+TGG 0.401921 4.1:-4527683 MS.gene06079:CDS
CAAAGAGCTTGCACCGCCTT+AGG 0.402102 4.1:-4531819 MS.gene06079:CDS
AACATTACAACTGGTCGATA+TGG 0.402322 4.1:-4525845 MS.gene06079:CDS
GAAACCGAACTGGCTCGTTT+GGG 0.407691 4.1:-4528216 MS.gene06079:CDS
CTAATTAGAGACTGAATGCC+TGG 0.416975 4.1:+4528258 None:intergenic
GATTTCTTACCTCGTGGATC+AGG 0.421686 4.1:-4531681 MS.gene06079:intron
AAACACCTAGCTAACAGAAT+GGG 0.429971 4.1:-4528454 MS.gene06079:CDS
CTTTCCCAAACGAGCCAGTT+CGG 0.441013 4.1:+4528212 None:intergenic
ACCCCAGCATCAGCTGCAAC+AGG 0.443010 4.1:+4528189 None:intergenic
ATATTCAAAGACCATCTTGA+TGG 0.447318 4.1:-4527875 MS.gene06079:CDS
CCATTGTTTATTGTCAAGTA+CGG 0.448290 4.1:-4525359 MS.gene06079:CDS
CAAAGCTGTTAGTGAGACTC+TGG 0.449716 4.1:-4527176 MS.gene06079:intron
GAATGAGAGATGAAAGCAAA+AGG 0.450845 4.1:-4525870 MS.gene06079:CDS
CACTAACAGCTTTGTGAACC+AGG 0.457295 4.1:+4527185 None:intergenic
CCTGCTATCGCCGTCGTTGG+TGG 0.458671 4.1:-4531750 MS.gene06079:CDS
TTCTGGAAAATCCTCCGTAT+TGG 0.463410 4.1:-4531721 MS.gene06079:CDS
AGCCTGTTGCAGCTGATGCT+GGG 0.466361 4.1:-4528191 MS.gene06079:CDS
CCAACCTCAGCCCGTAAACC+AGG 0.468070 4.1:+4525919 None:intergenic
CAGACCCCATTCTGTTAGCT+AGG 0.470784 4.1:+4528449 None:intergenic
TCCGTATTGGAGAGTGTTGT+CGG 0.471538 4.1:-4531708 MS.gene06079:CDS
AATATATGCTAAGATGAATA+GGG 0.472521 4.1:+4531136 None:intergenic
AGCTCCCTGCTGCTCTGAAA+AGG 0.472526 4.1:-4527711 MS.gene06079:CDS
CATATAGGTTAAAGTTCCCT+TGG 0.473662 4.1:-4528579 MS.gene06079:CDS
AAATGAAATTGAAACCGAAC+TGG 0.477658 4.1:-4528226 MS.gene06079:CDS
GAAGGAAATTCAAGATGAAA+CGG 0.484800 4.1:-4531196 MS.gene06079:CDS
CTGAAATAGATGCAGTTGCT+TGG 0.485487 4.1:-4525033 MS.gene06079:CDS
CAAAAGGGCAACATTACAAC+TGG 0.486257 4.1:-4525854 MS.gene06079:CDS
CAACTGGTCGATATGGAGTC+TGG 0.487914 4.1:-4525838 MS.gene06079:CDS
TGAAATTTGTTTGGATCGAC+CGG 0.492583 4.1:+4531164 None:intergenic
TTGCTTGCTCAGATGTTGGA+AGG 0.493499 4.1:-4528607 MS.gene06079:intron
AGACGACGGTATCCTTGCTC+TGG 0.498380 4.1:+4527604 None:intergenic
CTACGACGTTCCATAATTGC+AGG 0.498628 4.1:+4525097 None:intergenic
GTAATCAAGTCCAAGATTCC+AGG 0.501222 4.1:-4528276 MS.gene06079:CDS
CAACTGCATCTATTTCAGCT+TGG 0.501627 4.1:+4525038 None:intergenic
TTTGTCCTCATTACTGAATG+AGG 0.502603 4.1:-4525122 MS.gene06079:CDS
TATTTGTAGGGATCGTTACT+CGG 0.504045 4.1:-4531593 MS.gene06079:intron
ATAGCCAAAATTATACAGTT+CGG 0.504975 4.1:+4529807 None:intergenic
ATACCCTGGTTTACGGGCTG+AGG 0.506554 4.1:-4525923 MS.gene06079:CDS
CCACCAACGACGGCGATAGC+AGG 0.509781 4.1:+4531750 None:intergenic
CATTGTTTATTGTCAAGTAC+GGG 0.511383 4.1:-4525358 MS.gene06079:CDS
TACCGGTAGGATCCACTTCA+CGG 0.512959 4.1:+4529736 None:intergenic
TGTTGGAAGGGAGAGCATAT+AGG 0.515104 4.1:-4528594 MS.gene06079:CDS
CTGAGTTTCTTCACCTTCCG+AGG 0.516849 4.1:-4531518 MS.gene06079:CDS
GATTCTTATCTAAGGCGAAT+CGG 0.517945 4.1:-4525727 MS.gene06079:intron
GATGAAACGGATAGAGAAAC+CGG 0.518246 4.1:-4531183 MS.gene06079:CDS
TGCTTGCTCAGATGTTGGAA+GGG 0.521748 4.1:-4528606 MS.gene06079:intron
CCACCCTTGTCCACATCTTG+AGG 0.522131 4.1:+4525784 None:intergenic
AATTAAAATTTCCCGTGAAG+TGG 0.523008 4.1:-4529748 MS.gene06079:CDS
TAAACACCTAGCTAACAGAA+TGG 0.524545 4.1:-4528455 MS.gene06079:CDS
GGGCAAGTTATATGCAATCA+TGG 0.524553 4.1:-4527921 MS.gene06079:CDS
TAGTGGCCTTGCAAAGAGAC+TGG 0.526892 4.1:-4525077 MS.gene06079:CDS
TCAATTTCCTACAGGCGACC+TGG 0.527613 4.1:-4527766 MS.gene06079:intron
ATGTCATGCACAATACTCTC+AGG 0.527874 4.1:+4530700 None:intergenic
GGAAGAGAATCCCAAAGAGT+AGG 0.528008 4.1:+4531771 None:intergenic
AGATTCACCGTGGTCACCTA+AGG 0.530232 4.1:+4531803 None:intergenic
TTGTGTAGCTGCGGTGAGGA+AGG 0.537663 4.1:-4531214 MS.gene06079:intron
TGACACTCATCGATCTTCCT+GGG 0.537665 4.1:-4530863 MS.gene06079:CDS
CAGTAATGAGGACAAACGCT+TGG 0.541024 4.1:+4525129 None:intergenic
GTTGCAATATCTTGATTAGC+CGG 0.541684 4.1:+4529780 None:intergenic
GCCGACAACACTCTCCAATA+CGG 0.542785 4.1:+4531707 None:intergenic
GAAGAGAATCCCAAAGAGTA+GGG 0.542886 4.1:+4531772 None:intergenic
CTATTTCAGCTTGGGCACTT+CGG 0.542999 4.1:+4525047 None:intergenic
CTTCCTGCTATCGCCGTCGT+TGG 0.543291 4.1:-4531753 MS.gene06079:CDS
CATCAACAGCTGCCTCGGCA+GGG 0.550496 4.1:+4527551 None:intergenic
CAGCTTCACAAGAGTGATGA+GGG 0.550682 4.1:-4531555 MS.gene06079:CDS
TACTGCATCAACAGCTGCCT+CGG 0.554965 4.1:+4527546 None:intergenic
GAACATTACCTTCTCAATGT+AGG 0.558262 4.1:+4530660 None:intergenic
TCATTCGCTATTAAAGGACC+TGG 0.558428 4.1:-4527203 MS.gene06079:CDS
AGGTTAAAGTTCCCTTGGAT+CGG 0.560301 4.1:-4528574 MS.gene06079:CDS
AATGAGAGATGAAAGCAAAA+GGG 0.561742 4.1:-4525869 MS.gene06079:CDS
AAACTTATTACAGAAGCTGA+TGG 0.561888 4.1:-4527649 MS.gene06079:CDS
TACAATCAGGGGCCCTGCCG+AGG 0.565034 4.1:-4527563 MS.gene06079:CDS
CATCTTATTGCTCCAGAGCA+AGG 0.566493 4.1:-4527616 MS.gene06079:CDS
TCGGAAGCTTCCTCAAGATG+TGG 0.572910 4.1:-4525794 MS.gene06079:CDS
CTGTTCACAACACCGATCCA+AGG 0.576821 4.1:+4528562 None:intergenic
CGATCTTCCTGGGCTTACGA+AGG 0.578446 4.1:-4530853 MS.gene06079:CDS
CTGGAGCAATAAGATGAGGT+TGG 0.582750 4.1:+4527623 None:intergenic
TGACAATAAACAATGGACTT+CGG 0.583582 4.1:+4525366 None:intergenic
AGGATCCTCATTCAGTAATG+AGG 0.586057 4.1:+4525117 None:intergenic
GGCAAAGATTTCTTACCTCG+TGG 0.586975 4.1:-4531687 MS.gene06079:CDS
CTTAGCATATATTCTCCCAA+TGG 0.587409 4.1:-4531126 MS.gene06079:intron
TCCCGTGAAGTGGATCCTAC+CGG 0.593357 4.1:-4529738 MS.gene06079:intron
TTGTGAAGCTGCAAAACAAG+TGG 0.596364 4.1:+4531567 None:intergenic
AATCTTCGTCAAAACTCCAA+TGG 0.598241 4.1:+4529455 None:intergenic
GCCCCTGATTGTAACTAGAG+TGG 0.598316 4.1:+4527573 None:intergenic
GCAGCTTCACAAGAGTGATG+AGG 0.600736 4.1:-4531556 MS.gene06079:CDS
ACAGCGACCTTCGTAAGCCC+AGG 0.603913 4.1:+4530846 None:intergenic
ATCCACTCTAGTTACAATCA+GGG 0.605709 4.1:-4527575 MS.gene06079:CDS
ACCGGTAGGATCCACTTCAC+GGG 0.605810 4.1:+4529737 None:intergenic
GCTTCCTCAAGATGTGGACA+AGG 0.607803 4.1:-4525788 MS.gene06079:CDS
ACACATACACGCCATCAAGA+TGG 0.610251 4.1:+4527864 None:intergenic
AGAACTCTGGCCACCAACGA+CGG 0.610611 4.1:+4531740 None:intergenic
GCCTGTTGCAGCTGATGCTG+GGG 0.614544 4.1:-4528190 MS.gene06079:intron
TATGGAGTCTGGCTATCTGA+CGG 0.622814 4.1:-4525827 MS.gene06079:CDS
ACAACTCCAGTCTCTTTGCA+AGG 0.623060 4.1:+4525071 None:intergenic
TGCTCTGGAGCAATAAGATG+AGG 0.624218 4.1:+4527619 None:intergenic
CCGTACTTGACAATAAACAA+TGG 0.625270 4.1:+4525359 None:intergenic
CAGGATTTGAAGCAATACCC+TGG 0.628775 4.1:-4525937 MS.gene06079:CDS
GGGCTTACGAAGGTCGCTGT+AGG 0.630278 4.1:-4530843 MS.gene06079:intron
TGTTCACAACACCGATCCAA+GGG 0.632790 4.1:+4528563 None:intergenic
GGTTCGCTCCTACATTGAGA+AGG 0.633877 4.1:-4530668 MS.gene06079:intron
TCTGGCGAAGATGCTCTCAA+AGG 0.634471 4.1:-4528422 MS.gene06079:intron
TCCACTCTAGTTACAATCAG+GGG 0.638669 4.1:-4527574 MS.gene06079:CDS
TGGACTTACATCAACAGCAT+CGG 0.640860 4.1:+4529413 None:intergenic
AACACCTAGCTAACAGAATG+GGG 0.640990 4.1:-4528453 MS.gene06079:CDS
GCAATTATGGAACGTCGTAG+TGG 0.642760 4.1:-4525094 MS.gene06079:CDS
TGTTTATTGTCAAGTACGGG+AGG 0.645558 4.1:-4525355 MS.gene06079:CDS
CCTCAAGATGTGGACAAGGG+TGG 0.645800 4.1:-4525784 MS.gene06079:CDS
GAAGATTGATCTAATGGACA+AGG 0.654022 4.1:-4529439 MS.gene06079:CDS
TTCACCGTGGTCACCTAAGG+CGG 0.656734 4.1:+4531806 None:intergenic
CAACCTCAGCCCGTAAACCA+GGG 0.671483 4.1:+4525920 None:intergenic
TGCACCGCCTTAGGTGACCA+CGG 0.675185 4.1:-4531810 MS.gene06079:CDS
TAATTTGTGTAGCTGCGGTG+AGG 0.676029 4.1:-4531218 MS.gene06079:intron
ATTTCCTACAGGCGACCTGG+AGG 0.691883 4.1:-4527763 MS.gene06079:intron
GACAACACTCTCCAATACGG+AGG 0.703245 4.1:+4531710 None:intergenic
CTTCCTCAAGATGTGGACAA+GGG 0.710629 4.1:-4525787 MS.gene06079:CDS
GAGTGGATTCAATGAGACGA+CGG 0.714501 4.1:+4527590 None:intergenic
AAGATTGATCTAATGGACAA+GGG 0.722186 4.1:-4529438 MS.gene06079:CDS
ATGTTGACATGATTGCTGCA+AGG 0.728270 4.1:-4528516 MS.gene06079:CDS
GGAGTGCACTAGATTCACCG+TGG 0.804143 4.1:+4531793 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAAAAAAAATAAT+TGG + chr4.1:4527486-4527505 None:intergenic 0.0%
!! AAAAAAATCTATATTTGTTT+CGG + chr4.1:4526479-4526498 None:intergenic 10.0%
!! ACATATTATATATAAGAATA+AGG + chr4.1:4525875-4525894 None:intergenic 10.0%
!! ATAAATAACTAAGAAAAATA+TGG - chr4.1:4526311-4526330 MS.gene06079:intron 10.0%
!! CATATTATATATAAGAATAA+GGG + chr4.1:4525874-4525893 None:intergenic 10.0%
!! TTATATAGATATACATAATT+GGG + chr4.1:4527693-4527712 None:intergenic 10.0%
!!! TTTTTTTTTTTATACAATTG+GGG - chr4.1:4525220-4525239 MS.gene06079:intron 10.0%
!! AAAATAAATGGATATTATGT+GGG + chr4.1:4528824-4528843 None:intergenic 15.0%
!! AATAGAAGTAAATATATGAA+TGG + chr4.1:4530299-4530318 None:intergenic 15.0%
!! ATAACATTTGTGTAAAAATT+AGG - chr4.1:4527001-4527020 MS.gene06079:intron 15.0%
!! ATAGAAGTAAATATATGAAT+GGG + chr4.1:4530298-4530317 None:intergenic 15.0%
!! CATGATTAAATTAATACAAT+TGG - chr4.1:4530861-4530880 MS.gene06079:CDS 15.0%
!! GTTATATAGATATACATAAT+TGG + chr4.1:4527694-4527713 None:intergenic 15.0%
!! TAAATAAATTGTATAATTGC+TGG - chr4.1:4529783-4529802 MS.gene06079:CDS 15.0%
!! TTTCATATTTATAAGAACTA+AGG - chr4.1:4528063-4528082 MS.gene06079:intron 15.0%
!!! AAATTAGTGATTTTTCTAAT+TGG - chr4.1:4529527-4529546 MS.gene06079:intron 15.0%
!!! AATAAATGAAAAGTATAATC+AGG + chr4.1:4531625-4531644 None:intergenic 15.0%
!!! ACTTCACTTTTTAAATATAT+TGG + chr4.1:4531337-4531356 None:intergenic 15.0%
!!! ATAATACATACAATTTTACA+TGG - chr4.1:4527748-4527767 MS.gene06079:CDS 15.0%
!!! ATAGGAAATAAAATATTTTC+AGG - chr4.1:4526260-4526279 MS.gene06079:intron 15.0%
!!! ATATAGAAACATTTTGAAAA+TGG + chr4.1:4525485-4525504 None:intergenic 15.0%
!!! TATATTTTGTTACATGATAA+GGG - chr4.1:4530385-4530404 MS.gene06079:intron 15.0%
!!! TTACTTCTATTTTCTATTTA+TGG - chr4.1:4530308-4530327 MS.gene06079:intron 15.0%
!!! TTATATTTTGTTACATGATA+AGG - chr4.1:4530384-4530403 MS.gene06079:intron 15.0%
!!! TTTAAGTTCATCAAAATAAA+TGG + chr4.1:4528836-4528855 None:intergenic 15.0%
!! AAAAGAAAAGTTACCAAAAT+CGG + chr4.1:4525394-4525413 None:intergenic 20.0%
!! AATATATGCTAAGATGAATA+GGG + chr4.1:4525743-4525762 None:intergenic 20.0%
!! ACATAAGTTCTCAAAAAAAT+TGG + chr4.1:4529400-4529419 None:intergenic 20.0%
!! ATCATTAATTTCAAAAACTG+TGG - chr4.1:4526966-4526985 MS.gene06079:intron 20.0%
!! ATGAACAACTATTACAAAAA+GGG + chr4.1:4530844-4530863 None:intergenic 20.0%
!! ATTATCATTGTTTAGTCAAA+TGG + chr4.1:4530365-4530384 None:intergenic 20.0%
!! ATTCAAATCAGTAAAATCAA+TGG + chr4.1:4525444-4525463 None:intergenic 20.0%
!! CAAAATAAATGGATATTATG+TGG + chr4.1:4528825-4528844 None:intergenic 20.0%
!! CATAAGTTCTCAAAAAAATT+GGG + chr4.1:4529399-4529418 None:intergenic 20.0%
!! GATATAATGATTCTTATCTA+AGG - chr4.1:4531141-4531160 MS.gene06079:CDS 20.0%
!! TATATAATATGTAGATCTGT+CGG - chr4.1:4525883-4525902 MS.gene06079:CDS 20.0%
!! TTCAAATCAGTAAAATCAAT+GGG + chr4.1:4525443-4525462 None:intergenic 20.0%
!! TTGAAAGCAGAAAATTTATA+GGG + chr4.1:4530022-4530041 None:intergenic 20.0%
!!! AAATGCAGTTAAATTGTTTT+TGG + chr4.1:4530552-4530571 None:intergenic 20.0%
!!! AATTTTGTCATATGTCAATA+TGG - chr4.1:4531461-4531480 MS.gene06079:intron 20.0%
!!! AATTTTTTTGAGAACTTATG+TGG - chr4.1:4529399-4529418 MS.gene06079:intron 20.0%
!!! CTATAATTTTGTCTATTTGT+GGG + chr4.1:4526365-4526384 None:intergenic 20.0%
!!! GATAAAAGTTATGTTTCTAT+AGG + chr4.1:4526426-4526445 None:intergenic 20.0%
!!! GTTTATTTGTTTCAACTTTT+AGG - chr4.1:4527390-4527409 MS.gene06079:intron 20.0%
!!! TCTATAATTTTGTCTATTTG+TGG + chr4.1:4526366-4526385 None:intergenic 20.0%
!!! TTATCTTTTTGTAATGCTAT+GGG - chr4.1:4530741-4530760 MS.gene06079:intron 20.0%
!!! TTATTCAAGTGTTGAATTAT+GGG - chr4.1:4525959-4525978 MS.gene06079:intron 20.0%
!!! TTGATTTTTATATCAGCATT+TGG - chr4.1:4528572-4528591 MS.gene06079:CDS 20.0%
!!! TTTATTCAAGTGTTGAATTA+TGG - chr4.1:4525958-4525977 MS.gene06079:intron 20.0%
!!! TTTCAATATTTCCTTTTCTT+TGG - chr4.1:4527164-4527183 MS.gene06079:intron 20.0%
! AAAACAACTGATCATTATCA+GGG + chr4.1:4528191-4528210 None:intergenic 25.0%
! AAATTAATACAATTGGAACC+TGG - chr4.1:4530868-4530887 MS.gene06079:CDS 25.0%
! AATATAATAGCATGCAAACA+TGG - chr4.1:4527503-4527522 MS.gene06079:intron 25.0%
! AATTGAAACCAGAAATTTAG+AGG - chr4.1:4530179-4530198 MS.gene06079:intron 25.0%
! ACATGGAAACATTTCAAAAT+CGG + chr4.1:4525612-4525631 None:intergenic 25.0%
! ACTCAATAATGAACAGATTT+AGG + chr4.1:4530678-4530697 None:intergenic 25.0%
! AGACCTTAAAAAAAGTCATT+TGG + chr4.1:4530087-4530106 None:intergenic 25.0%
! AGCTTTCAATGGAAAATATA+AGG - chr4.1:4529204-4529223 MS.gene06079:intron 25.0%
! AGTGCAAAAAGTTAGAATAA+TGG + chr4.1:4527297-4527316 None:intergenic 25.0%
! ATAATTGATGCGTATTTGTA+GGG - chr4.1:4525271-4525290 MS.gene06079:intron 25.0%
! ATAGCCAAAATTATACAGTT+CGG + chr4.1:4527072-4527091 None:intergenic 25.0%
! ATATAATCAAACGTACCATT+GGG + chr4.1:4525768-4525787 None:intergenic 25.0%
! ATCAATATGACTTTAGTTGT+TGG + chr4.1:4528557-4528576 None:intergenic 25.0%
! ATTTATAAGAACTAAGGAGT+TGG - chr4.1:4528069-4528088 MS.gene06079:intron 25.0%
! CAACATGAAAACACTTAATA+AGG + chr4.1:4528907-4528926 None:intergenic 25.0%
! CAACTTAGTGTTAGAATATT+GGG - chr4.1:4527659-4527678 MS.gene06079:CDS 25.0%
! CATGAACAACTATTACAAAA+AGG + chr4.1:4530845-4530864 None:intergenic 25.0%
! CTATCAAAAATTGAATGAGT+GGG + chr4.1:4531122-4531141 None:intergenic 25.0%
! GAATATATGCTAAGATGAAT+AGG + chr4.1:4525744-4525763 None:intergenic 25.0%
! GATATACATAATTGGGATTA+TGG + chr4.1:4527686-4527705 None:intergenic 25.0%
! GATGAACTTAAATATTGATG+TGG - chr4.1:4528844-4528863 MS.gene06079:intron 25.0%
! GATTTAATCATAAAGATGAG+AGG - chr4.1:4526449-4526468 MS.gene06079:intron 25.0%
! GCATTAAGTAAATAGTTTGA+TGG - chr4.1:4527353-4527372 MS.gene06079:intron 25.0%
! GTTGAAAGCAGAAAATTTAT+AGG + chr4.1:4530023-4530042 None:intergenic 25.0%
! TAAAACAACTGATCATTATC+AGG + chr4.1:4528192-4528211 None:intergenic 25.0%
! TAATCTATGCAATTAGCATT+CGG + chr4.1:4526519-4526538 None:intergenic 25.0%
! TAGAATAATGGTTAAATCTG+CGG + chr4.1:4527285-4527304 None:intergenic 25.0%
! TAGAGAATAAATAAGAATGC+AGG + chr4.1:4528007-4528026 None:intergenic 25.0%
! TATATAATCAAACGTACCAT+TGG + chr4.1:4525769-4525788 None:intergenic 25.0%
! TATCAAAAATTGAATGAGTG+GGG + chr4.1:4531121-4531140 None:intergenic 25.0%
! TATCATCTGTCATTGTTAAA+TGG - chr4.1:4531391-4531410 MS.gene06079:intron 25.0%
! TCAAATCAGTAAAATCAATG+GGG + chr4.1:4525442-4525461 None:intergenic 25.0%
! TCGTTAAATGCATTCAAAAT+GGG + chr4.1:4527202-4527221 None:intergenic 25.0%
! TCTATAGGATGATTATGTAA+AGG + chr4.1:4526411-4526430 None:intergenic 25.0%
! TCTATCAAAAATTGAATGAG+TGG + chr4.1:4531123-4531142 None:intergenic 25.0%
! TGATGTTCATACATAATACA+AGG + chr4.1:4526950-4526969 None:intergenic 25.0%
! TTATTTAAATACAGGGACTT+GGG + chr4.1:4526580-4526599 None:intergenic 25.0%
! TTCGTTAAATGCATTCAAAA+TGG + chr4.1:4527203-4527222 None:intergenic 25.0%
! TTGGAACAGAGAATTTAAAA+TGG + chr4.1:4528734-4528753 None:intergenic 25.0%
! TTTATAAGAACTAAGGAGTT+GGG - chr4.1:4528070-4528089 MS.gene06079:intron 25.0%
! TTTATTTAAATACAGGGACT+TGG + chr4.1:4526581-4526600 None:intergenic 25.0%
!! AAAAGTATAATCAGGAAACT+TGG + chr4.1:4531617-4531636 None:intergenic 25.0%
!! AAAGGAAATATTGAAAGTAC+CGG + chr4.1:4527160-4527179 None:intergenic 25.0%
!! ATTTTTGCATAACTGTAGAT+GGG - chr4.1:4526150-4526169 MS.gene06079:intron 25.0%
!! CAAAAATCAAAGGAGAATTT+TGG - chr4.1:4530204-4530223 MS.gene06079:intron 25.0%
!! CAAGTACTAAAGCTTTTAAT+AGG - chr4.1:4526242-4526261 MS.gene06079:intron 25.0%
!! GCATTTAACGAATCTTTTTA+TGG - chr4.1:4527211-4527230 MS.gene06079:intron 25.0%
!! GTTATCTTTTTGTAATGCTA+TGG - chr4.1:4530740-4530759 MS.gene06079:intron 25.0%
!! TAATTTACAGCTTTTAGACA+GGG + chr4.1:4529513-4529532 None:intergenic 25.0%
!! TGAACTTTTGTAAAAAAAGC+AGG + chr4.1:4530053-4530072 None:intergenic 25.0%
!! TTATAAATTTTATCACCTCC+AGG + chr4.1:4529131-4529150 None:intergenic 25.0%
!! TTTGATAAAGGGTTTTCTTT+CGG - chr4.1:4529977-4529996 MS.gene06079:intron 25.0%
!!! ATAAGTTTTATGAGACTGTT+TGG - chr4.1:4530436-4530455 MS.gene06079:intron 25.0%
!!! ATTCTAGAAGTGTTTGATAA+AGG - chr4.1:4529965-4529984 MS.gene06079:intron 25.0%
!!! ATTTTCAGGATCAACTTATA+TGG - chr4.1:4526274-4526293 MS.gene06079:intron 25.0%
!!! CAAAATTCTCCTTTGATTTT+TGG + chr4.1:4530206-4530225 None:intergenic 25.0%
!!! CTGTTTTTTCATTGCATAAA+GGG + chr4.1:4526646-4526665 None:intergenic 25.0%
!!! GGGGTTTTTATTTAAATACA+GGG + chr4.1:4526587-4526606 None:intergenic 25.0%
!!! GTTCCAAATGACTTTTTTTA+AGG - chr4.1:4530081-4530100 MS.gene06079:intron 25.0%
!!! TAAGTTTTATGAGACTGTTT+GGG - chr4.1:4530437-4530456 MS.gene06079:intron 25.0%
!!! TATAATTTTGGCTATTTCAC+CGG - chr4.1:4527077-4527096 MS.gene06079:intron 25.0%
!!! TATTTTTGCATAACTGTAGA+TGG - chr4.1:4526149-4526168 MS.gene06079:intron 25.0%
!!! TCTGTTTTTTCATTGCATAA+AGG + chr4.1:4526647-4526666 None:intergenic 25.0%
!!! TGAACTTGGACTTTTTTTAT+GGG + chr4.1:4526617-4526636 None:intergenic 25.0%
!!! TGGGGTTTTTATTTAAATAC+AGG + chr4.1:4526588-4526607 None:intergenic 25.0%
!!! TGTATTATGTGTTTTTGTCT+TGG - chr4.1:4529561-4529580 MS.gene06079:intron 25.0%
!!! TTCTAGAAGTGTTTGATAAA+GGG - chr4.1:4529966-4529985 MS.gene06079:intron 25.0%
!!! TTTGATGGTTTTCTAATCAT+TGG - chr4.1:4527368-4527387 MS.gene06079:intron 25.0%
!!! TTTTGTTGACTAATGAGATT+AGG + chr4.1:4525035-4525054 None:intergenic 25.0%
AAACTTATTACAGAAGCTGA+TGG - chr4.1:4529227-4529246 MS.gene06079:intron 30.0%
AAAGTAGTCTCAAACTTGAA+CGG - chr4.1:4531184-4531203 MS.gene06079:CDS 30.0%
AAATGAAATTGAAACCGAAC+TGG - chr4.1:4528650-4528669 MS.gene06079:intron 30.0%
AAGGTCAAAACAATGGAAAA+GGG - chr4.1:4527540-4527559 MS.gene06079:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr4.1:4530651-4530670 MS.gene06079:intron 30.0%
AATGAGAGATGAAAGCAAAA+GGG - chr4.1:4531007-4531026 MS.gene06079:intron 30.0%
AATTAAAATTTCCCGTGAAG+TGG - chr4.1:4527128-4527147 MS.gene06079:intron 30.0%
AATTCTCAAAGCAAATACAG+AGG + chr4.1:4529948-4529967 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr4.1:4530652-4530671 MS.gene06079:intron 30.0%
ATAGCAGCAAGAAATAAAAC+TGG + chr4.1:4529755-4529774 None:intergenic 30.0%
ATATTCAAAGACCATCTTGA+TGG - chr4.1:4529001-4529020 MS.gene06079:intron 30.0%
ATGAAAATCGTTGAAGAAAC+CGG + chr4.1:4526808-4526827 None:intergenic 30.0%
ATTCTCAAAGCAAATACAGA+GGG + chr4.1:4529947-4529966 None:intergenic 30.0%
ATTTGGAAACAGCATTTGAA+TGG - chr4.1:4529844-4529863 MS.gene06079:intron 30.0%
CAAATCAGTAAAATCAATGG+GGG + chr4.1:4525441-4525460 None:intergenic 30.0%
CATAATTGATGCGTATTTGT+AGG - chr4.1:4525270-4525289 MS.gene06079:intron 30.0%
CATTGTTTATTGTCAAGTAC+GGG - chr4.1:4531518-4531537 MS.gene06079:CDS 30.0%
CCATTGTTTATTGTCAAGTA+CGG - chr4.1:4531517-4531536 MS.gene06079:CDS 30.0%
GAAATGTTTCCATGTATGTA+TGG - chr4.1:4525617-4525636 MS.gene06079:intron 30.0%
GAAGGAAATTCAAGATGAAA+CGG - chr4.1:4525680-4525699 MS.gene06079:intron 30.0%
GAGAAATTACTTCCAAACTT+GGG + chr4.1:4526549-4526568 None:intergenic 30.0%
GCAAAGAATGAGTATTTACA+AGG + chr4.1:4527716-4527735 None:intergenic 30.0%
GCAACTTAGTGTTAGAATAT+TGG - chr4.1:4527658-4527677 MS.gene06079:CDS 30.0%
GTAGGAAATTGACACAAATA+AGG + chr4.1:4529102-4529121 None:intergenic 30.0%
GTCATTTGTGTGTGTTTATA+CGG - chr4.1:4528790-4528809 MS.gene06079:intron 30.0%
TAGATAAGCTCAATTCATAC+TGG + chr4.1:4530411-4530430 None:intergenic 30.0%
TATTTGTGTCAATTTCCTAC+AGG - chr4.1:4529102-4529121 MS.gene06079:intron 30.0%
TCATTTGTGTGTGTTTATAC+GGG - chr4.1:4528791-4528810 MS.gene06079:intron 30.0%
TGAGAAATTACTTCCAAACT+TGG + chr4.1:4526550-4526569 None:intergenic 30.0%
TGATGAGTAGAAATTTACAG+AGG - chr4.1:4527885-4527904 MS.gene06079:CDS 30.0%
TGTAACTGAAATAGTGATGT+AGG - chr4.1:4530718-4530737 MS.gene06079:intron 30.0%
TGTAAGATCGTTTGAATTGT+AGG - chr4.1:4526336-4526355 MS.gene06079:intron 30.0%
TTAATAAGGATCCCTGAAAA+TGG + chr4.1:4528893-4528912 None:intergenic 30.0%
TTAGCTAGGTGTTTATATTC+AGG + chr4.1:4528416-4528435 None:intergenic 30.0%
TTCTAGTGACAATGTTCATT+TGG - chr4.1:4529827-4529846 MS.gene06079:intron 30.0%
TTGTTACAAGGTCAAAACAA+TGG - chr4.1:4527533-4527552 MS.gene06079:intron 30.0%
TTTAGAGGACCAAAAATCAA+AGG - chr4.1:4530194-4530213 MS.gene06079:intron 30.0%
TTTGACGAAGATTGATCTAA+TGG - chr4.1:4527431-4527450 MS.gene06079:intron 30.0%
! AAATCAAAGGAGAATTTTGG+AGG - chr4.1:4530207-4530226 MS.gene06079:intron 30.0%
! AAGATTGATCTAATGGACAA+GGG - chr4.1:4527438-4527457 MS.gene06079:intron 30.0%
! AATATGACACTCCATTTTCA+GGG - chr4.1:4528879-4528898 MS.gene06079:intron 30.0%
! AATATTGATGTGGTGATGAT+TGG - chr4.1:4528854-4528873 MS.gene06079:intron 30.0%
! AATCAAAGGAGAATTTTGGA+GGG - chr4.1:4530208-4530227 MS.gene06079:intron 30.0%
! CGTGAACTTTTGTAAAAAAC+AGG - chr4.1:4530150-4530169 MS.gene06079:intron 30.0%
! CTAATTTACAGCTTTTAGAC+AGG + chr4.1:4529514-4529533 None:intergenic 30.0%
! GCAAGATAAACTTTCTAGAA+TGG + chr4.1:4526894-4526913 None:intergenic 30.0%
! GCAAGCAAAAGTATATATCA+TGG + chr4.1:4528257-4528276 None:intergenic 30.0%
! GCATCATTTGCTGAAATATT+AGG - chr4.1:4528497-4528516 MS.gene06079:CDS 30.0%
! GTTTTGCTTATAATAGTGAC+CGG - chr4.1:4531355-4531374 MS.gene06079:intron 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr4.1:4531374-4531355 None:intergenic 30.0%
! TAATATGACACTCCATTTTC+AGG - chr4.1:4528878-4528897 MS.gene06079:intron 30.0%
! TAATCTTTTGCTGATCTCTT+TGG - chr4.1:4529608-4529627 MS.gene06079:intron 30.0%
! TGACAATAAACAATGGACTT+CGG + chr4.1:4531513-4531532 None:intergenic 30.0%
! TTGATAAAGGGTTTTCTTTC+GGG - chr4.1:4529978-4529997 MS.gene06079:intron 30.0%
!! AAGTTTTATGAGACTGTTTG+GGG - chr4.1:4530438-4530457 MS.gene06079:intron 30.0%
!! CATGGTTATAGTTTGTTACA+AGG - chr4.1:4527521-4527540 MS.gene06079:intron 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG + chr4.1:4530518-4530537 None:intergenic 30.0%
!! TGAAAGTTGGTATACTTAGA+GGG - chr4.1:4530239-4530258 MS.gene06079:intron 30.0%
!! TGTTTTGAATTGATTCTTCC+AGG - chr4.1:4529649-4529668 MS.gene06079:intron 30.0%
!! TTTTTGGTCCTCTAAATTTC+TGG + chr4.1:4530190-4530209 None:intergenic 30.0%
!!! CTGAACTTGGACTTTTTTTA+TGG + chr4.1:4526618-4526637 None:intergenic 30.0%
!!! CTTTTTGCACTGTTGATTTT+TGG - chr4.1:4527306-4527325 MS.gene06079:intron 30.0%
AAAAAAATACCTGATCCACG+AGG + chr4.1:4525207-4525226 None:intergenic 35.0%
AAACAAAACCCAGGTTGTAA+AGG - chr4.1:4526684-4526703 MS.gene06079:intron 35.0%
AAACACCTAGCTAACAGAAT+GGG - chr4.1:4528422-4528441 MS.gene06079:intron 35.0%
AAACTTGAACGGACAGTATA+TGG - chr4.1:4531195-4531214 MS.gene06079:CDS 35.0%
AACATTACAACTGGTCGATA+TGG - chr4.1:4531031-4531050 MS.gene06079:intron 35.0%
AACGCTAAAAGCCAAAGAAA+AGG + chr4.1:4527178-4527197 None:intergenic 35.0%
AACTGCATCTATTTCAGCTT+GGG + chr4.1:4531840-4531859 None:intergenic 35.0%
AATCCACTCTAGTTACAATC+AGG - chr4.1:4529300-4529319 MS.gene06079:intron 35.0%
AATCTTCGTCAAAACTCCAA+TGG + chr4.1:4527424-4527443 None:intergenic 35.0%
AATGCAGGTCAATTGAAATC+AGG + chr4.1:4527992-4528011 None:intergenic 35.0%
AATGTAAAATGAGAAGTCCC+AGG + chr4.1:4529732-4529751 None:intergenic 35.0%
ACAAATGACAAAAGTCTGGA+GGG + chr4.1:4528779-4528798 None:intergenic 35.0%
ACACACAAATGACAAAAGTC+TGG + chr4.1:4528783-4528802 None:intergenic 35.0%
AGGTCAAAACAATGGAAAAG+GGG - chr4.1:4527541-4527560 MS.gene06079:intron 35.0%
ATGATATACTATACTCCCTC+CGG + chr4.1:4531377-4531396 None:intergenic 35.0%
ATTCTCTGTTCCAAAACCAT+TGG - chr4.1:4528740-4528759 MS.gene06079:intron 35.0%
ATTGCCAGTAAATGAAAACC+AGG + chr4.1:4530889-4530908 None:intergenic 35.0%
CAAGGTCAAAACAATGGAAA+AGG - chr4.1:4527539-4527558 MS.gene06079:intron 35.0%
CAGATAAGCTCATTAGTCAT+AGG + chr4.1:4527850-4527869 None:intergenic 35.0%
CAGTGAAAAAGTGATCAAGT+AGG + chr4.1:4531557-4531576 None:intergenic 35.0%
CATATAGGTTAAAGTTCCCT+TGG - chr4.1:4528297-4528316 MS.gene06079:intron 35.0%
CATGTATGTATGGATGGTAA+TGG - chr4.1:4525627-4525646 MS.gene06079:intron 35.0%
CATTACCATCCATACATACA+TGG + chr4.1:4525629-4525648 None:intergenic 35.0%
CCGTACTTGACAATAAACAA+TGG + chr4.1:4531520-4531539 None:intergenic 35.0%
CTATGACTAATGAGCTTATC+TGG - chr4.1:4527848-4527867 MS.gene06079:intron 35.0%
CTTAGCATATATTCTCCCAA+TGG - chr4.1:4525750-4525769 MS.gene06079:CDS 35.0%
GAACATTACCTTCTCAATGT+AGG + chr4.1:4526219-4526238 None:intergenic 35.0%
GAATGAGAGATGAAAGCAAA+AGG - chr4.1:4531006-4531025 MS.gene06079:intron 35.0%
GATTAAGAAGTTCCCAAGTT+TGG - chr4.1:4526534-4526553 MS.gene06079:intron 35.0%
GTTGCAATATCTTGATTAGC+CGG + chr4.1:4527099-4527118 None:intergenic 35.0%
TAAACACCTAGCTAACAGAA+TGG - chr4.1:4528421-4528440 MS.gene06079:intron 35.0%
TAAGGTTGGGTATCATTCTA+TGG - chr4.1:4527815-4527834 MS.gene06079:intron 35.0%
TATAATCAGGAAACTTGGAG+AGG + chr4.1:4531612-4531631 None:intergenic 35.0%
TATTTGTAGGGATCGTTACT+CGG - chr4.1:4525283-4525302 MS.gene06079:intron 35.0%
TCATAGTTTAATACTCCCTC+CGG - chr4.1:4531224-4531243 MS.gene06079:intron 35.0%
TGAGTTGTTTGGGTCAAAAA+CGG - chr4.1:4526709-4526728 MS.gene06079:intron 35.0%
TGTCATCAAAAAAAGTCGCT+TGG - chr4.1:4530118-4530137 MS.gene06079:intron 35.0%
TGTGCATGACATTGAGAATA+TGG - chr4.1:4526187-4526206 MS.gene06079:intron 35.0%
TGTTTCCATGTATGTATGGA+TGG - chr4.1:4525621-4525640 MS.gene06079:intron 35.0%
TTTCACTGAGCTAGGAAAAA+TGG - chr4.1:4531569-4531588 MS.gene06079:CDS 35.0%
TTTGAGAACTTATGTGGTAG+TGG - chr4.1:4529405-4529424 MS.gene06079:intron 35.0%
TTTGTCCTCATTACTGAATG+AGG - chr4.1:4531754-4531773 MS.gene06079:CDS 35.0%
! AAATCGGTGAATCTTTTCCT+CGG + chr4.1:4525378-4525397 None:intergenic 35.0%
! AGGGACAGTTGAAATTTGTT+TGG + chr4.1:4525724-4525743 None:intergenic 35.0%
! ATCTGACGGTTGATTTCTTT+CGG - chr4.1:4531063-4531082 MS.gene06079:intron 35.0%
! GAAGATTGATCTAATGGACA+AGG - chr4.1:4527437-4527456 MS.gene06079:intron 35.0%
! GATTCTTATCTAAGGCGAAT+CGG - chr4.1:4531149-4531168 MS.gene06079:CDS 35.0%
! GGCAATTTTCTCATCAATAC+TGG - chr4.1:4530903-4530922 MS.gene06079:intron 35.0%
! GGTTTCTTCAACGATTTTCA+TGG - chr4.1:4526807-4526826 MS.gene06079:intron 35.0%
! TCTTCAACGATTTTCATGGT+TGG - chr4.1:4526811-4526830 MS.gene06079:intron 35.0%
! TGAAATTTGTTTGGATCGAC+CGG + chr4.1:4525715-4525734 None:intergenic 35.0%
! TGTAAAGGTGTGAGTTGTTT+GGG - chr4.1:4526699-4526718 MS.gene06079:intron 35.0%
! TTGTAAAGGTGTGAGTTGTT+TGG - chr4.1:4526698-4526717 MS.gene06079:intron 35.0%
! TTTTGTAATGCTATGGGCAT+TGG - chr4.1:4530747-4530766 MS.gene06079:intron 35.0%
!! AATGGACTTTTCACAAGTAC+AGG + chr4.1:4530347-4530366 None:intergenic 35.0%
!! AGTTTTATGAGACTGTTTGG+GGG - chr4.1:4530439-4530458 MS.gene06079:intron 35.0%
!! CTGAAAGTTGGTATACTTAG+AGG - chr4.1:4530238-4530257 MS.gene06079:intron 35.0%
!! GAAAGTTGGTATACTTAGAG+GGG - chr4.1:4530240-4530259 MS.gene06079:intron 35.0%
!! GAAATATTGAAAGTACCGGT+AGG + chr4.1:4527156-4527175 None:intergenic 35.0%
!! TACTGGCTTTGTTTATTCTC+AGG - chr4.1:4530920-4530939 MS.gene06079:intron 35.0%
!! TGGTTTAATTTGTGTAGCTG+CGG - chr4.1:4525653-4525672 MS.gene06079:intron 35.0%
!!! ACTTTTTTTATGGGACTCAG+TGG + chr4.1:4526608-4526627 None:intergenic 35.0%
!!! AGGAAAAGATTCACCGATTT+TGG - chr4.1:4525378-4525397 MS.gene06079:CDS 35.0%
!!! CTTTTTTTATGGGACTCAGT+GGG + chr4.1:4526607-4526626 None:intergenic 35.0%
!!! TTTTTTTATGGGACTCAGTG+GGG + chr4.1:4526606-4526625 None:intergenic 35.0%
AACACCTAGCTAACAGAATG+GGG - chr4.1:4528423-4528442 MS.gene06079:CDS 40.0%
AACTCACACCTTTACAACCT+GGG + chr4.1:4526695-4526714 None:intergenic 40.0%
ACAACTGCAAGAGTCACAAA+AGG + chr4.1:4525988-4526007 None:intergenic 40.0%
ACATTGTCACTAGAATTCCC+CGG + chr4.1:4529822-4529841 None:intergenic 40.0%
AGAGGAAAATCGTTGAATCG+GGG + chr4.1:4526771-4526790 None:intergenic 40.0%
AGCCTTCCATATTGAGGATA+TGG - chr4.1:4527965-4527984 MS.gene06079:intron 40.0%
AGGATCCTCATTCAGTAATG+AGG + chr4.1:4531762-4531781 None:intergenic 40.0%
AGGGTTATGCTATAAACTCG+AGG + chr4.1:4528172-4528191 None:intergenic 40.0%
AGGTTAAAGTTCCCTTGGAT+CGG - chr4.1:4528302-4528321 MS.gene06079:intron 40.0%
ATAAAGGGATGCACTGAACT+TGG + chr4.1:4526631-4526650 None:intergenic 40.0%
ATGTCATGCACAATACTCTC+AGG + chr4.1:4526179-4526198 None:intergenic 40.0%
ATGTTGACATGATTGCTGCA+AGG - chr4.1:4528360-4528379 MS.gene06079:intron 40.0%
CAAAAACTGTGGCAAGTTCT+TGG - chr4.1:4526977-4526996 MS.gene06079:intron 40.0%
CAAAAGGGCAACATTACAAC+TGG - chr4.1:4531022-4531041 MS.gene06079:intron 40.0%
CAACTGCATCTATTTCAGCT+TGG + chr4.1:4531841-4531860 None:intergenic 40.0%
CACAAATGACAAAAGTCTGG+AGG + chr4.1:4528780-4528799 None:intergenic 40.0%
CAGAGGAAAATCGTTGAATC+GGG + chr4.1:4526772-4526791 None:intergenic 40.0%
CCAGGTTCATTCGCTATTAA+AGG - chr4.1:4529667-4529686 MS.gene06079:intron 40.0%
CCTTTAATAGCGAATGAACC+TGG + chr4.1:4529670-4529689 None:intergenic 40.0%
CGAGTCAAAAAACAAAACCC+AGG - chr4.1:4526675-4526694 MS.gene06079:intron 40.0%
CTAATTAGAGACTGAATGCC+TGG + chr4.1:4528621-4528640 None:intergenic 40.0%
CTGAAATAGATGCAGTTGCT+TGG - chr4.1:4531843-4531862 MS.gene06079:CDS 40.0%
GAAGAGAATCCCAAAGAGTA+GGG + chr4.1:4525107-4525126 None:intergenic 40.0%
GAATGAGGATCCTGCAATTA+TGG - chr4.1:4531769-4531788 MS.gene06079:CDS 40.0%
GAGAACAAGCTGACTGAATT+GGG - chr4.1:4527328-4527347 MS.gene06079:intron 40.0%
GATGAAACGGATAGAGAAAC+CGG - chr4.1:4525693-4525712 MS.gene06079:intron 40.0%
GCAGAGGAAAATCGTTGAAT+CGG + chr4.1:4526773-4526792 None:intergenic 40.0%
GCCTTCCATATTGAGGATAT+GGG - chr4.1:4527966-4527985 MS.gene06079:intron 40.0%
GGGCAAGTTATATGCAATCA+TGG - chr4.1:4528955-4528974 MS.gene06079:intron 40.0%
GGGTTATGCTATAAACTCGA+GGG + chr4.1:4528171-4528190 None:intergenic 40.0%
GGTTATGCTATAAACTCGAG+GGG + chr4.1:4528170-4528189 None:intergenic 40.0%
GTAATCAAGTCCAAGATTCC+AGG - chr4.1:4528600-4528619 MS.gene06079:intron 40.0%
GTTATGCTATAAACTCGAGG+GGG + chr4.1:4528169-4528188 None:intergenic 40.0%
GTTGAAATGTGCAGAGCTTT+CGG - chr4.1:4529881-4529900 MS.gene06079:intron 40.0%
GTTGAGTTAGTGCTAAGGTT+GGG - chr4.1:4527802-4527821 MS.gene06079:intron 40.0%
GTTTGACAAGCAGCTTTCAA+TGG - chr4.1:4529193-4529212 MS.gene06079:intron 40.0%
TCATTCGCTATTAAAGGACC+TGG - chr4.1:4529673-4529692 MS.gene06079:intron 40.0%
TCTATGCAATTAGCATTCGG+TGG + chr4.1:4526516-4526535 None:intergenic 40.0%
TGAAGCAATACCCTGGTTTA+CGG - chr4.1:4530946-4530965 MS.gene06079:intron 40.0%
TGACATGTCTTTCCTGTACA+CGG - chr4.1:4526068-4526087 MS.gene06079:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr4.1:4531359-4531378 MS.gene06079:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr4.1:4531378-4531359 None:intergenic 40.0%
TGGACTTACATCAACAGCAT+CGG + chr4.1:4527466-4527485 None:intergenic 40.0%
TGGGTATCATTCTATGGCAT+TGG - chr4.1:4527821-4527840 MS.gene06079:intron 40.0%
TGTTTATTGTCAAGTACGGG+AGG - chr4.1:4531521-4531540 MS.gene06079:CDS 40.0%
TTGAAATGTGCAGAGCTTTC+GGG - chr4.1:4529882-4529901 MS.gene06079:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr4.1:4531358-4531377 MS.gene06079:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr4.1:4531377-4531358 None:intergenic 40.0%
TTGTGAAGCTGCAAAACAAG+TGG + chr4.1:4525312-4525331 None:intergenic 40.0%
! ACTTTTGCTTGCTCAGATGT+TGG - chr4.1:4528265-4528284 MS.gene06079:CDS 40.0%
! ATAGCCTTAAAACCGTGTAC+AGG + chr4.1:4526083-4526102 None:intergenic 40.0%
! CAACGATTTTCATGGTTGGA+GGG - chr4.1:4526815-4526834 MS.gene06079:intron 40.0%
! CTTTCCTGTACACGGTTTTA+AGG - chr4.1:4526076-4526095 MS.gene06079:intron 40.0%
! CTTTTAGGCGAAAGAACCAT+TGG - chr4.1:4527405-4527424 MS.gene06079:intron 40.0%
! GACAAGGTAACCAATGGTTT+TGG + chr4.1:4528753-4528772 None:intergenic 40.0%
! GCAGCCGAACTGTATAATTT+TGG - chr4.1:4527065-4527084 MS.gene06079:intron 40.0%
! GGTCTGCAAAGAGTATATAC+AGG + chr4.1:4531729-4531748 None:intergenic 40.0%
! TCAACGATTTTCATGGTTGG+AGG - chr4.1:4526814-4526833 MS.gene06079:intron 40.0%
! TTCTGGAAAATCCTCCGTAT+TGG - chr4.1:4525155-4525174 MS.gene06079:intron 40.0%
!! ACTGTTAGCCTTCCATATTG+AGG - chr4.1:4527959-4527978 MS.gene06079:intron 40.0%
!! AGCAAGGATTAATCGGTTTG+AGG + chr4.1:4528144-4528163 None:intergenic 40.0%
!! AGCATACTGCTTTTCGTACA+TGG + chr4.1:4527028-4527047 None:intergenic 40.0%
!! AGTACAGAAGCATCATCTTG+TGG - chr4.1:4525918-4525937 MS.gene06079:CDS 40.0%
!! GCATACTGCTTTTCGTACAT+GGG + chr4.1:4527027-4527046 None:intergenic 40.0%
!! GGAACCTGGTTTTCATTTAC+TGG - chr4.1:4530882-4530901 MS.gene06079:intron 40.0%
!! TGTATGGATGGTAATGGTGA+TGG - chr4.1:4525633-4525652 MS.gene06079:intron 40.0%
!! TTAGACAGGGTTGATGTTTG+AGG + chr4.1:4529500-4529519 None:intergenic 40.0%
!!! GATCACTTTTTCACTGAGCT+AGG - chr4.1:4531561-4531580 MS.gene06079:CDS 40.0%
AAAGTCTGGAGGGAAAGACA+AGG + chr4.1:4528769-4528788 None:intergenic 45.0%
AATCGTTGAAGAAACCGGAG+TGG + chr4.1:4526803-4526822 None:intergenic 45.0%
ACAACTCCAGTCTCTTTGCA+AGG + chr4.1:4531808-4531827 None:intergenic 45.0%
ACACATACACGCCATCAAGA+TGG + chr4.1:4529015-4529034 None:intergenic 45.0%
AGACTGAATGCCTGGAATCT+TGG + chr4.1:4528613-4528632 None:intergenic 45.0%
AGACTGTTTGGGGGAACATA+TGG - chr4.1:4530448-4530467 MS.gene06079:intron 45.0%
CAAAGCTGTTAGTGAGACTC+TGG - chr4.1:4529700-4529719 MS.gene06079:intron 45.0%
CAACTCACACCTTTACAACC+TGG + chr4.1:4526696-4526715 None:intergenic 45.0%
CAATCTCACTCTGCGTATTC+AGG - chr4.1:4531432-4531451 MS.gene06079:intron 45.0%
CACTGAGCTAGGAAAAATGG+AGG - chr4.1:4531572-4531591 MS.gene06079:CDS 45.0%
CAGCTTCACAAGAGTGATGA+GGG - chr4.1:4525321-4525340 MS.gene06079:CDS 45.0%
CAGTAATGAGGACAAACGCT+TGG + chr4.1:4531750-4531769 None:intergenic 45.0%
CATCTTATTGCTCCAGAGCA+AGG - chr4.1:4529260-4529279 MS.gene06079:intron 45.0%
CCTTAGCACTAACTCAACCA+AGG + chr4.1:4527800-4527819 None:intergenic 45.0%
CCTTGGTTGAGTTAGTGCTA+AGG - chr4.1:4527797-4527816 MS.gene06079:intron 45.0%
CTACGACGTTCCATAATTGC+AGG + chr4.1:4531782-4531801 None:intergenic 45.0%
CTATTTCAGCTTGGGCACTT+CGG + chr4.1:4531832-4531851 None:intergenic 45.0%
CTGGAGCAATAAGATGAGGT+TGG + chr4.1:4529256-4529275 None:intergenic 45.0%
CTTCCTCAAGATGTGGACAA+GGG - chr4.1:4531089-4531108 MS.gene06079:intron 45.0%
GAACAGATTTAGGCCCTGTT+TGG + chr4.1:4530668-4530687 None:intergenic 45.0%
GAAGCAATACCCTGGTTTAC+GGG - chr4.1:4530947-4530966 MS.gene06079:intron 45.0%
GAGGAAAATCGTTGAATCGG+GGG + chr4.1:4526770-4526789 None:intergenic 45.0%
GAGGGACGAAAACTGAAAGT+TGG - chr4.1:4530226-4530245 MS.gene06079:intron 45.0%
GATTTCTTACCTCGTGGATC+AGG - chr4.1:4525195-4525214 MS.gene06079:intron 45.0%
GCAATTATGGAACGTCGTAG+TGG - chr4.1:4531782-4531801 MS.gene06079:CDS 45.0%
GCCCATATCCTCAATATGGA+AGG + chr4.1:4527970-4527989 None:intergenic 45.0%
GGAAGAGAATCCCAAAGAGT+AGG + chr4.1:4525108-4525127 None:intergenic 45.0%
GGAGAACAAGCTGACTGAAT+TGG - chr4.1:4527327-4527346 MS.gene06079:intron 45.0%
GGCAAAGATTTCTTACCTCG+TGG - chr4.1:4525189-4525208 MS.gene06079:intron 45.0%
GGGAAAGACAAGGTAACCAA+TGG + chr4.1:4528759-4528778 None:intergenic 45.0%
GGTCAAAAACGGTTCACCAT+GGG - chr4.1:4526720-4526739 MS.gene06079:intron 45.0%
GGTTGAGTTAGTGCTAAGGT+TGG - chr4.1:4527801-4527820 MS.gene06079:intron 45.0%
TAGTGCACTCCCTACTCTTT+GGG - chr4.1:4525095-4525114 MS.gene06079:CDS 45.0%
TATGGAGTCTGGCTATCTGA+CGG - chr4.1:4531049-4531068 MS.gene06079:intron 45.0%
TCAGGCCCATATCCTCAATA+TGG + chr4.1:4527974-4527993 None:intergenic 45.0%
TGACACTCATCGATCTTCCT+GGG - chr4.1:4526013-4526032 MS.gene06079:intron 45.0%
TGCTTGCTCAGATGTTGGAA+GGG - chr4.1:4528270-4528289 MS.gene06079:CDS 45.0%
TGTTCACAACACCGATCCAA+GGG + chr4.1:4528316-4528335 None:intergenic 45.0%
TTCTTGCAGTTCTTCTGCAC+AGG - chr4.1:4530810-4530829 MS.gene06079:intron 45.0%
TTGACACTCATCGATCTTCC+TGG - chr4.1:4526012-4526031 MS.gene06079:intron 45.0%
TTGCTTGCTCAGATGTTGGA+AGG - chr4.1:4528269-4528288 MS.gene06079:CDS 45.0%
! ATAACTTGCCCTGCATGTGA+TGG + chr4.1:4528946-4528965 None:intergenic 45.0%
! CACTAACAGCTTTGTGAACC+AGG + chr4.1:4529694-4529713 None:intergenic 45.0%
! CAGGATTTGAAGCAATACCC+TGG - chr4.1:4530939-4530958 MS.gene06079:intron 45.0%
! GAGTGGATTCAATGAGACGA+CGG + chr4.1:4529289-4529308 None:intergenic 45.0%
! TAATTTGTGTAGCTGCGGTG+AGG - chr4.1:4525658-4525677 MS.gene06079:intron 45.0%
! TGCAATTAGCATTCGGTGGT+AGG + chr4.1:4526512-4526531 None:intergenic 45.0%
! TGTTGGAAGGGAGAGCATAT+AGG - chr4.1:4528282-4528301 MS.gene06079:CDS 45.0%
!! GAGAACTTATGTGGTAGTGG+TGG - chr4.1:4529408-4529427 MS.gene06079:intron 45.0%
!! TCCGTATTGGAGAGTGTTGT+CGG - chr4.1:4525168-4525187 MS.gene06079:intron 45.0%
!! TCTCTAGTGTTGGTTTCCCA+TGG + chr4.1:4526739-4526758 None:intergenic 45.0%
!! TGAGACTCTGGTTTGTTCCT+GGG - chr4.1:4529712-4529731 MS.gene06079:intron 45.0%
!! TGCTCTGGAGCAATAAGATG+AGG + chr4.1:4529260-4529279 None:intergenic 45.0%
!!! TGGGCATTGGCAATGACTTT+TGG - chr4.1:4530760-4530779 MS.gene06079:intron 45.0%
!!! ATTTTTTTTTTTATACAATT+GGG - chr4.1:4525219-4525238 MS.gene06079:intron 5.0%
!!! TATTTTTTTTTTTATACAAT+TGG - chr4.1:4525218-4525237 MS.gene06079:intron 5.0%
ACTGCTTTGCCATCACATGC+AGG - chr4.1:4528934-4528953 MS.gene06079:intron 50.0%
AGATTCACCGTGGTCACCTA+AGG + chr4.1:4525076-4525095 None:intergenic 50.0%
CAACTGGTCGATATGGAGTC+TGG - chr4.1:4531038-4531057 MS.gene06079:intron 50.0%
CAGACCCCATTCTGTTAGCT+AGG + chr4.1:4528430-4528449 None:intergenic 50.0%
CTAGTGCACTCCCTACTCTT+TGG - chr4.1:4525094-4525113 MS.gene06079:CDS 50.0%
CTGAGTTTCTTCACCTTCCG+AGG - chr4.1:4525358-4525377 MS.gene06079:CDS 50.0%
CTGCTTTGCCATCACATGCA+GGG - chr4.1:4528935-4528954 MS.gene06079:intron 50.0%
CTGTTCACAACACCGATCCA+AGG + chr4.1:4528317-4528336 None:intergenic 50.0%
CTTTCCCAAACGAGCCAGTT+CGG + chr4.1:4528667-4528686 None:intergenic 50.0%
GACAACACTCTCCAATACGG+AGG + chr4.1:4525169-4525188 None:intergenic 50.0%
GCAATGAAACAGCAGACCAG+AGG + chr4.1:4530786-4530805 None:intergenic 50.0%
GCAGCTTCACAAGAGTGATG+AGG - chr4.1:4525320-4525339 MS.gene06079:CDS 50.0%
GCCGACAACACTCTCCAATA+CGG + chr4.1:4525172-4525191 None:intergenic 50.0%
GCTTCCTCAAGATGTGGACA+AGG - chr4.1:4531088-4531107 MS.gene06079:intron 50.0%
GGGGGTGAGCAAGGATTAAT+CGG + chr4.1:4528151-4528170 None:intergenic 50.0%
GGGTCAAAAACGGTTCACCA+TGG - chr4.1:4526719-4526738 MS.gene06079:intron 50.0%
GGTTCGCTCCTACATTGAGA+AGG - chr4.1:4526208-4526227 MS.gene06079:intron 50.0%
TACCGGTAGGATCCACTTCA+CGG + chr4.1:4527143-4527162 None:intergenic 50.0%
TACTGCATCAACAGCTGCCT+CGG + chr4.1:4529333-4529352 None:intergenic 50.0%
TCAATTTCCTACAGGCGACC+TGG - chr4.1:4529110-4529129 MS.gene06079:intron 50.0%
TCGGAAGCTTCCTCAAGATG+TGG - chr4.1:4531082-4531101 MS.gene06079:intron 50.0%
TCTGGCGAAGATGCTCTCAA+AGG - chr4.1:4528454-4528473 MS.gene06079:CDS 50.0%
! AACCAAGGAGCCTGACTTGA+TGG + chr4.1:4527785-4527804 None:intergenic 50.0%
! CGGAGGATTTTCCAGAACTC+TGG + chr4.1:4525152-4525171 None:intergenic 50.0%
! CGGTGAATCTTTTCCTCGGA+AGG + chr4.1:4525374-4525393 None:intergenic 50.0%
! GCAACCTTTTCAGAGCAGCA+GGG + chr4.1:4529172-4529191 None:intergenic 50.0%
! GGCAGCGTTTTCTCTAGTGT+TGG + chr4.1:4526749-4526768 None:intergenic 50.0%
! TAGTGGCCTTGCAAAGAGAC+TGG - chr4.1:4531799-4531818 MS.gene06079:CDS 50.0%
! TGCAACCTTTTCAGAGCAGC+AGG + chr4.1:4529173-4529192 None:intergenic 50.0%
! TGCTGGTGCTCTTATTTCGC+CGG - chr4.1:4529800-4529819 MS.gene06079:CDS 50.0%
! TGGCAATGACTTTTGGCCTC+TGG - chr4.1:4530767-4530786 MS.gene06079:intron 50.0%
!! GAAACCGAACTGGCTCGTTT+GGG - chr4.1:4528660-4528679 MS.gene06079:intron 50.0%
!! GTGAGACTCTGGTTTGTTCC+TGG - chr4.1:4529711-4529730 MS.gene06079:intron 50.0%
!! TGAAACCGAACTGGCTCGTT+TGG - chr4.1:4528659-4528678 MS.gene06079:intron 50.0%
AAGCCTGTTGCAGCTGATGC+TGG - chr4.1:4528684-4528703 MS.gene06079:intron 55.0%
ACCGGTAGGATCCACTTCAC+GGG + chr4.1:4527142-4527161 None:intergenic 55.0%
AGAACTCTGGCCACCAACGA+CGG + chr4.1:4525139-4525158 None:intergenic 55.0%
AGACGACGGTATCCTTGCTC+TGG + chr4.1:4529275-4529294 None:intergenic 55.0%
AGCCTGTTGCAGCTGATGCT+GGG - chr4.1:4528685-4528704 MS.gene06079:intron 55.0%
ATTTCCTACAGGCGACCTGG+AGG - chr4.1:4529113-4529132 MS.gene06079:intron 55.0%
CAAAGAGCTTGCACCGCCTT+AGG - chr4.1:4525057-4525076 MS.gene06079:CDS 55.0%
CAACCTCAGCCCGTAAACCA+GGG + chr4.1:4530959-4530978 None:intergenic 55.0%
CAGAATGGGGTCTGAGCATC+TGG - chr4.1:4528436-4528455 MS.gene06079:CDS 55.0%
CCACCCTTGTCCACATCTTG+AGG + chr4.1:4531095-4531114 None:intergenic 55.0%
CCTCAAGATGTGGACAAGGG+TGG - chr4.1:4531092-4531111 MS.gene06079:intron 55.0%
CGATCTTCCTGGGCTTACGA+AGG - chr4.1:4526023-4526042 MS.gene06079:intron 55.0%
CTAAGGCGGTGCAAGCTCTT+TGG + chr4.1:4525059-4525078 None:intergenic 55.0%
CTCCATCAAGTCAGGCTCCT+TGG - chr4.1:4527780-4527799 MS.gene06079:intron 55.0%
GGAGTGCACTAGATTCACCG+TGG + chr4.1:4525086-4525105 None:intergenic 55.0%
TAAACTCGAGGGGGTGAGCA+AGG + chr4.1:4528160-4528179 None:intergenic 55.0%
TCATCCGCCTCCATCAAGTC+AGG - chr4.1:4527772-4527791 MS.gene06079:intron 55.0%
TCCCGTGAAGTGGATCCTAC+CGG - chr4.1:4527138-4527157 MS.gene06079:intron 55.0%
TTCACCGTGGTCACCTAAGG+CGG + chr4.1:4525073-4525092 None:intergenic 55.0%
TTGTGTAGCTGCGGTGAGGA+AGG - chr4.1:4525662-4525681 MS.gene06079:intron 55.0%
! ATACCCTGGTTTACGGGCTG+AGG - chr4.1:4530953-4530972 MS.gene06079:intron 55.0%
! CAAGGAGCCTGACTTGATGG+AGG + chr4.1:4527782-4527801 None:intergenic 55.0%
! CTGGTGCTCTTATTTCGCCG+GGG - chr4.1:4529802-4529821 MS.gene06079:CDS 55.0%
! CTGGTTTACGGGCTGAGGTT+GGG - chr4.1:4530958-4530977 MS.gene06079:intron 55.0%
! GCTGGTGCTCTTATTTCGCC+GGG - chr4.1:4529801-4529820 MS.gene06079:CDS 55.0%
! TGGTTTACGGGCTGAGGTTG+GGG - chr4.1:4530959-4530978 MS.gene06079:intron 55.0%
! TTTTCAGAGCAGCAGGGAGC+TGG + chr4.1:4529166-4529185 None:intergenic 55.0%
!! AGCTCCCTGCTGCTCTGAAA+AGG - chr4.1:4529165-4529184 MS.gene06079:intron 55.0%
ACAGCGACCTTCGTAAGCCC+AGG + chr4.1:4526033-4526052 None:intergenic 60.0%
ACCCCAGCATCAGCTGCAAC+AGG + chr4.1:4528690-4528709 None:intergenic 60.0%
ATCACCTCCAGGTCGCCTGT+AGG + chr4.1:4529120-4529139 None:intergenic 60.0%
CATCAACAGCTGCCTCGGCA+GGG + chr4.1:4529328-4529347 None:intergenic 60.0%
CCAACCTCAGCCCGTAAACC+AGG + chr4.1:4530960-4530979 None:intergenic 60.0%
CCTCTGCGTGCTTACCACTC+CGG - chr4.1:4526786-4526805 MS.gene06079:intron 60.0%
CTTCCTGCTATCGCCGTCGT+TGG - chr4.1:4525123-4525142 MS.gene06079:CDS 60.0%
GCCTGTTGCAGCTGATGCTG+GGG - chr4.1:4528686-4528705 MS.gene06079:intron 60.0%
GGGCTTACGAAGGTCGCTGT+AGG - chr4.1:4526033-4526052 MS.gene06079:intron 60.0%
TGCACCGCCTTAGGTGACCA+CGG - chr4.1:4525066-4525085 MS.gene06079:CDS 60.0%
! CCTGGTTTACGGGCTGAGGT+TGG - chr4.1:4530957-4530976 MS.gene06079:intron 60.0%
! GGAGCCTGACTTGATGGAGG+CGG + chr4.1:4527779-4527798 None:intergenic 60.0%
!! GTCGTTGGTGGCCAGAGTTC+TGG - chr4.1:4525138-4525157 MS.gene06079:intron 60.0%
CCACCAACGACGGCGATAGC+AGG + chr4.1:4525129-4525148 None:intergenic 65.0%
CCGGAGTGGTAAGCACGCAG+AGG + chr4.1:4526789-4526808 None:intergenic 65.0%
CCTGCTATCGCCGTCGTTGG+TGG - chr4.1:4525126-4525145 MS.gene06079:CDS 65.0%
GCATCAACAGCTGCCTCGGC+AGG + chr4.1:4529329-4529348 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 4525024 4531874 4525024 ID=MS.gene06079
chr4.1 mRNA 4525024 4531874 4525024 ID=MS.gene06079.t1;Parent=MS.gene06079
chr4.1 exon 4531682 4531874 4531682 ID=MS.gene06079.t1.exon1;Parent=MS.gene06079.t1
chr4.1 CDS 4531682 4531874 4531682 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4531499 4531606 4531499 ID=MS.gene06079.t1.exon2;Parent=MS.gene06079.t1
chr4.1 CDS 4531499 4531606 4531499 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4531127 4531228 4531127 ID=MS.gene06079.t1.exon3;Parent=MS.gene06079.t1
chr4.1 CDS 4531127 4531228 4531127 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4530844 4530894 4530844 ID=MS.gene06079.t1.exon4;Parent=MS.gene06079.t1
chr4.1 CDS 4530844 4530894 4530844 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4530669 4530730 4530669 ID=MS.gene06079.t1.exon5;Parent=MS.gene06079.t1
chr4.1 CDS 4530669 4530730 4530669 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4529739 4529829 4529739 ID=MS.gene06079.t1.exon6;Parent=MS.gene06079.t1
chr4.1 CDS 4529739 4529829 4529739 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4529422 4529486 4529422 ID=MS.gene06079.t1.exon7;Parent=MS.gene06079.t1
chr4.1 CDS 4529422 4529486 4529422 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4528423 4528617 4528423 ID=MS.gene06079.t1.exon8;Parent=MS.gene06079.t1
chr4.1 CDS 4528423 4528617 4528423 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4528191 4528310 4528191 ID=MS.gene06079.t1.exon9;Parent=MS.gene06079.t1
chr4.1 CDS 4528191 4528310 4528191 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4527872 4527942 4527872 ID=MS.gene06079.t1.exon10;Parent=MS.gene06079.t1
chr4.1 CDS 4527872 4527942 4527872 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4527549 4527774 4527549 ID=MS.gene06079.t1.exon11;Parent=MS.gene06079.t1
chr4.1 CDS 4527549 4527774 4527549 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4527177 4527227 4527177 ID=MS.gene06079.t1.exon12;Parent=MS.gene06079.t1
chr4.1 CDS 4527177 4527227 4527177 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4525728 4525956 4525728 ID=MS.gene06079.t1.exon13;Parent=MS.gene06079.t1
chr4.1 CDS 4525728 4525956 4525728 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4525305 4525444 4525305 ID=MS.gene06079.t1.exon14;Parent=MS.gene06079.t1
chr4.1 CDS 4525305 4525444 4525305 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
chr4.1 exon 4525024 4525152 4525024 ID=MS.gene06079.t1.exon15;Parent=MS.gene06079.t1
chr4.1 CDS 4525024 4525152 4525024 ID=cds.MS.gene06079.t1;Parent=MS.gene06079.t1
Gene Sequence

>MS.gene06079

ATGGAAAACCTAATCTCATTAGTCAACAAAATCCAAAGAGCTTGCACCGCCTTAGGTGACCACGGTGAATCTAGTGCACTCCCTACTCTTTGGGATTCTCTTCCTGCTATCGCCGTCGTTGGTGGCCAGAGTTCTGGAAAATCCTCCGTATTGGAGAGTGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGTATTTTTTTTTTTATACAATTGGGGATTGTGAATTGTGATTTGAAATTTGTTCATAATTGATGCGTATTTGTAGGGATCGTTACTCGGAGACCACTTGTTTTGCAGCTTCACAAGAGTGATGAGGGAACAAGAGAATATGCTGAGTTTCTTCACCTTCCGAGGAAAAGATTCACCGATTTTGGTAACTTTTCTTTTGTCACTCTAATCTTCGCGTTTTTTCCCCCATTGATTTTACTGATTTGAATGTTATTGACTCTATTTGACCATTTTCAAAATGTTTCTATATATGTATGAGTTTTTGTGTTTTTTTTCTTCTTTTTCTCATTGCTATTTAGTAAATGATCGAGCTATTTAGATTTTACTGATTCAAATGTTTTTGACTCTATTTGACCGATTTTGAAATGTTTCCATGTATGTATGGATGGTAATGGTGATGGTTTAATTTGTGTAGCTGCGGTGAGGAAGGAAATTCAAGATGAAACGGATAGAGAAACCGGTCGATCCAAACAAATTTCAACTGTCCCTATTCATCTTAGCATATATTCTCCCAATGGTACGTTTGATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTATTATCTATTGTTGTACTGCATCCCTTATTCTTATATATAATATGTAGATCTGTCGGTAACAATGCTTAAGTACAGAAGCATCATCTTGTGGTCTATTTGTTTGCTCATTTTATTCAAGTGTTGAATTATGGGTGACCTTTTGTGACTCTTGCAGTTGTTAACTTGACACTCATCGATCTTCCTGGGCTTACGAAGGTCGCTGTAGGTATGCAATCAATTGACATGTCTTTCCTGTACACGGTTTTAAGGCTATTTAGTGTGAATTTTATTTTCGTAATGATGTACGAGATGCTCATAGATATTTTTGCATAACTGTAGATGGGCAACCTGAGAGTATTGTGCATGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGGTAATGTTCATTCAAGTACTAAAGCTTTTAATAGGAAATAAAATATTTTCAGGATCAACTTATATGGTTTAATTTTTAAAAATAAATAACTAAGAAAAATATGGAGTGTAAGATCGTTTGAATTGTAGGATTCCCACAAATAGACAAAATTATAGAGATAAATAACTGAGAAAAATAACCTTTACATAATCATCCTATAGAAACATAACTTTTATCACTGATTTAATCATAAAGATGAGAGGTTGACCGAAACAAATATAGATTTTTTTTTTATTAATTCCTACCACCGAATGCTAATTGCATAGATTAAGAAGTTCCCAAGTTTGGAAGTAATTTCTCAACTAAAACCCAAGTCCCTGTATTTAAATAAAAACCCCACTGAGTCCCATAAAAAAAGTCCAAGTTCAGTGCATCCCTTTATGCAATGAAAAAACAGATCAACTTTCGAGTCAAAAAACAAAACCCAGGTTGTAAAGGTGTGAGTTGTTTGGGTCAAAAACGGTTCACCATGGGAAACCAACACTAGAGAAAACGCTGCCCCCGATTCAACGATTTTCCTCTGCGTGCTTACCACTCCGGTTTCTTCAACGATTTTCATGGTTGGAGGGAGAAAAACACGTGAGATCTAATGATATCACAATCTTAATCGTGCTCTTAACAACCATTCTAGAAAGTTTATCTTGCAAAGTTCTCTGATGTGCAAAAATGACGTGCTTACCTTGTATTATGTATGAACATCATTAATTTCAAAAACTGTGGCAAGTTCTTGGTATAACATTTGTGTAAAAATTAGGCCCATGTACGAAAAGCAGTATGCTGAAATTGATGTTATTTTGCAGCCGAACTGTATAATTTTGGCTATTTCACCGGCTAATCAAGATATTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACCGGTACTTTCAATATTTCCTTTTCTTTGGCTTTTAGCGTTTCCCATTTTGAATGCATTTAACGAATCTTTTTATGGTTTGTTGAGAATCAATAATTCAATATTTCAATATGTTGTATATTTACACCGCAGATTTAACCATTATTCTAACTTTTTGCACTGTTGATTTTTGGAGAACAAGCTGACTGAATTGGGCAGCATTAAGTAAATAGTTTGATGGTTTTCTAATCATTGGTTTATTTGTTTCAACTTTTAGGCGAAAGAACCATTGGAGTTTTGACGAAGATTGATCTAATGGACAAGGGTACCGATGCTGTTGATGTAAGTCCAATTATTTTTTTTATTTTAATATAATAGCATGCAAACATGGTTATAGTTTGTTACAAGGTCAAAACAATGGAAAAGGGGTCGAAGATCTTGCATATGTCTACTATTATTATTATTGTTGTTGTTATTATTATTACTATCATCATCATCATCATCATTATTATCTGTGAACTCTGCAACTTAGTGTTAGAATATTGGGTCCATAATCCCAATTATGTATATCTATATAACCTTGTAAATACTCATTCTTTGCAAGTAGTAAAATATAATACATACAATTTTACATGGTTCATCCGCCTCCATCAAGTCAGGCTCCTTGGTTGAGTTAGTGCTAAGGTTGGGTATCATTCTATGGCATTGGTCACCTATGACTAATGAGCTTATCTGGATCAAGCAGCTAACTGATGAGTAGAAATTTACAGAGGTCTCTCATATGAAGTTGCTTTTTGATAATTATTAGTTGCTCTGTCAAAATAACTGTTAGCCTTCCATATTGAGGATATGGGCCTGATTTCAATTGACCTGCATTCTTATTTATTCTCTATGAGAATAACTTGTTAAGTATAGAATCTAGACATAGTTTCATATTTATAAGAACTAAGGAGTTGGGTGAATTGTTCATAAAGCTTGAAATTTCTCGTGTTAAAGTGTCTTTCTGCCTCAAACCGATTAATCCTTGCTCACCCCCTCGAGTTTATAGCATAACCCTGATAATGATCAGTTGTTTTATTCTAAGAAGCTATAAAAGTAAATACTTGATTCTGTACTGATCCATGATATATACTTTTGCTTGCTCAGATGTTGGAAGGGAGAGCATATAGGTTAAAGTTCCCTTGGATCGGTGTTGTGAACAGATCACAAGCAGACATAAACAAGAATGTTGACATGATTGCTGCAAGGCGTAGAGAACGTGAATACTTTAATAGTACTCCTGAATATAAACACCTAGCTAACAGAATGGGGTCTGAGCATCTGGCGAAGATGCTCTCAAAGGTACATCAAAAACAATATATAGCATCATTTGCTGAAATATTAGGTGTTCATTTTTATGTAAATCTGTTTTAGTAGCTTCCAACAACTAAAGTCATATTGATTTTTATATCAGCATTTGGAGACAGTAATCAAGTCCAAGATTCCAGGCATTCAGTCTCTAATTAGCAAAACAATAAATGAAATTGAAACCGAACTGGCTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGTAAGTTTGCTCTTATTTTCTAGCCATTTTAAATTCTCTGTTCCAAAACCATTGGTTACCTTGTCTTTCCCTCCAGACTTTTGTCATTTGTGTGTGTTTATACGGGCATTCGTCCCACATAATATCCATTTATTTTGATGAACTTAAATATTGATGTGGTGATGATTGGATAATATGACACTCCATTTTCAGGGATCCTTATTAAGTGTTTTCATGTTGACTAATGACTGCTTTGCCATCACATGCAGGGCAAGTTATATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTCAAAGACCATCTTGATGGCGTGTATGTGTTATACTTTTCTGATTGAAGTTAACATTTTACTGTGCAATTCGTTTGTTTTTTCATGCTGTATTTCCTTATTTGTGTCAATTTCCTACAGGCGACCTGGAGGTGATAAAATTTATAACGTCTTTGACAACCAGCTCCCTGCTGCTCTGAAAAGGTTGCAGTTTGACAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGATACCAACCTCATCTTATTGCTCCAGAGCAAGGATACCGTCGTCTCATTGAATCCACTCTAGTTACAATCAGGGGCCCTGCCGAGGCAGCTGTTGATGCAGTATGTTTTTCACAAGAGAATTATCAATAGCAATTGAAATTTTGTACCCAATTTTTTTGAGAACTTATGTGGTAGTGGTGGTGTGCTATAAAGAATGTGTTGAAATAAAATACTTGATTAAAGAGAAAAAAAAAAAAAAAACTTTAGCCTCAAACATCAACCCTGTCTAAAAGCTGTAAATTAGTGATTTTTCTAATTGGATACTTTTTTATGTATTATGTGTTTTTGTCTTGGTTAATCTACTTAAGCATTCAGCTTTAATCTTTTGCTGATCTCTTTGGTCATACTCATTGAATTCTTGTTTTGAATTGATTCTTCCAGGTTCATTCGCTATTAAAGGACCTGGTTCACAAAGCTGTTAGTGAGACTCTGGTTTGTTCCTGGGACTTCTCATTTTACATTCCAGTTTTATTTCTTGCTGCTATATTTGTTCTAAATAAATTGTATAATTGCTGGTGCTCTTATTTCGCCGGGGAATTCTAGTGACAATGTTCATTTGGAAACAGCATTTGAATGGCTTCAATTTTAGAAGTTGAAATGTGCAGAGCTTTCGGGTTTTCTTTGATTGAGTATTAAGATATTTGTTCTAACTATCCCTCTGTATTTGCTTTGAGAATTCTAGAAGTGTTTGATAAAGGGTTTTCTTTCGGGTTTTCTTCGATTTTTTGTCCCTATAAATTTTCTGCTTTCAACTTCAGTACCTGCTTTTTTTACAAAAGTTCATGTTTTGTGTTCCAAATGACTTTTTTTAAGGTCTTATCAGTGATATGTCATCAAAAAAAGTCGCTTGGAACATGAAACGTGAACTTTTGTAAAAAACAGGAATTGAAATTGAAACCAGAAATTTAGAGGACCAAAAATCAAAGGAGAATTTTGGAGGGACGAAAACTGAAAGTTGGTATACTTAGAGGGGAGTAAAAACAATTTTAACACTACAAAATATAACCCATTCATATATTTACTTCTATTTTCTATTTATGGAATTATCATATAACCTGTACTTGTGAAAAGTCCATTTGACTAAACAATGATAATTATATTTTGTTACATGATAAGGGCCAGTATGAATTGAGCTTATCTACTGTCATAAGTTTTATGAGACTGTTTGGGGGAACATATGGAAACAGCTTATGACATTTTTCATAAGCTTATTTTAATTAGTTCTCCAAGATAGCTTATGAAAACAACTTATATCATATCCAAAAACAATTTAACTGCATTTTATCTTCTGCTATAGAAATAGCATATGTAAGCTTATACATACGTGCTTATCATAATAAGCAGTTGTGACATAAGCTGCAAATAAGCTGTTTATCCAAACAGGGCCTAAATCTGTTCATTATTGAGTTCAAGTGTTAAAATAAAATATGTAACTGAAATAGTGATGTAGGTTATCTTTTTGTAATGCTATGGGCATTGGCAATGACTTTTGGCCTCTGGTCTGCTGTTTCATTGCTACTTTCTTGCAGTTCTTCTGCACAGGTTTACTTGCCCTTTTTGTAATAGTTGTTCATGATTAAATTAATACAATTGGAACCTGGTTTTCATTTACTGGCAATTTTCTCATCAATACTGGCTTTGTTTATTCTCAGGATTTGAAGCAATACCCTGGTTTACGGGCTGAGGTTGGGGCTGCAGCTATTGATTCGTTAGATAGAATGAGAGATGAAAGCAAAAGGGCAACATTACAACTGGTCGATATGGAGTCTGGCTATCTGACGGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTGGACAAGGGTGGCAACCCCACTCATTCAATTTTTGATAGATATAATGATTCTTATCTAAGGCGAATCGGTATGTCTTATTAAAAGTAGTCTCAAACTTGAACGGACAGTATATGGTTGCTCTCATAGTTTAATACTCCCTCCGGTCACTATTATAAGCAAAACTTCACTTTTTAGATACATTGAATAATTAATGTATCTAGTCTTTATTATAAACTAGATACATTAATTATCCAATATATTTAAAAAGTGAAGTTTTGCTTATAATAGTGACCGGAGGGAGTATAGTATATCATCTGTCATTGTTAAATGGAACTTAAAACTGACTGTTCAATCTCACTCTGCGTATTCAGGAACAACAATTTTGTCATATGTCAATATGGTCTGCGCTACTCTACGACATTCAATTCCGAAGTCCATTGTTTATTGTCAAGTACGGGAGGCAAAAAGAAGCCTACTTGATCACTTTTTCACTGAGCTAGGAAAAATGGAGGTGAGAATAAATTTGCCTCTCCAAGTTTCCTGATTATACTTTTCATTTATTCAAAAAACTTGCTTAAAAGCAAAAAATTATTGAGCTGCTTTTAATTTAGTTTTTAAAGTTAAATAAATTAAGCGTTGTCTGCCTGTATATACTCTTTGCAGACCAAGCGTTTGTCCTCATTACTGAATGAGGATCCTGCAATTATGGAACGTCGTAGTGGCCTTGCAAAGAGACTGGAGTTGTACCGAAGTGCCCAAGCTGAAATAGATGCAGTTGCTTGGTCTAAGTAA
Protein sequence

>MS.gene06079.t1

MENLISLVNKIQRACTALGDHGESSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKSDEGTREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRSKQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVHDIENMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDMLEGRAYRLKFPWIGVVNRSQADINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLISKTINEIETELARLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESTLVTIRGPAEAAVDAVHSLLKDLVHKAVSETLDLKQYPGLRAEVGAAAIDSLDRMRDESKRATLQLVDMESGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSGLAKRLELYRSAQAEIDAVAWSK