AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06124

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06124.t1 MTR_8g100075 99.046 629 6 0 1 629 1 629 0.0 1305
MS.gene06124.t1 MTR_0019s0120 56.390 626 262 5 9 628 14 634 0.0 773
MS.gene06124.t1 MTR_7g076170 60.032 618 224 6 20 622 18 627 0.0 771
MS.gene06124.t1 MTR_8g432680 57.800 609 249 5 22 622 24 632 0.0 751
MS.gene06124.t1 MTR_1g101370 57.167 600 243 6 28 621 27 618 0.0 746
MS.gene06124.t1 MTR_4g098890 56.551 603 232 7 25 617 18 600 0.0 729
MS.gene06124.t1 MTR_8g055840 54.023 609 258 5 25 628 17 608 0.0 710
MS.gene06124.t1 MTR_5g040360 52.979 621 263 7 17 629 9 608 0.0 693
MS.gene06124.t1 MTR_3g040370 52.451 612 258 6 25 628 19 605 0.0 666
MS.gene06124.t1 MTR_0019s0120 56.084 526 220 5 9 528 14 534 0.0 644
MS.gene06124.t1 MTR_7g006060 49.815 540 265 3 81 614 26 565 0.0 601
MS.gene06124.t1 MTR_8g071280 44.677 573 303 10 61 627 31 595 1.93e-175 511
MS.gene06124.t1 MTR_5g026930 46.768 526 270 7 98 620 72 590 5.50e-173 505
MS.gene06124.t1 MTR_7g076150 43.805 573 282 10 63 620 40 587 3.36e-172 503
MS.gene06124.t1 MTR_8g432620 42.328 567 297 8 63 621 57 601 8.12e-170 497
MS.gene06124.t1 MTR_1g442840 45.825 515 249 11 96 596 90 588 1.99e-155 461
MS.gene06124.t1 MTR_5g080720 42.222 540 271 11 95 617 122 637 3.09e-154 459
MS.gene06124.t1 MTR_1g442840 46.516 488 235 10 119 596 4 475 1.63e-151 447
MS.gene06124.t1 MTR_1g069785 41.681 571 293 14 73 620 32 585 1.09e-149 446
MS.gene06124.t1 MTR_1g075900 42.572 552 280 14 96 627 89 623 2.40e-147 441
MS.gene06124.t1 MTR_3g068990 41.744 539 289 10 88 617 143 665 4.61e-147 441
MS.gene06124.t1 MTR_7g076150 45.923 466 218 8 167 620 1 444 8.29e-147 432
MS.gene06124.t1 MTR_1g029730 40.602 532 283 11 97 619 151 658 1.33e-142 429
MS.gene06124.t1 MTR_5g026930 46.774 434 222 6 98 528 72 499 1.54e-141 421
MS.gene06124.t1 MTR_3g096480 40.489 573 302 16 63 620 228 776 8.80e-138 421
MS.gene06124.t1 MTR_5g080720 42.500 480 235 11 95 557 122 577 2.32e-134 405
MS.gene06124.t1 MTR_3g088790 41.045 536 281 15 101 620 226 742 2.52e-133 409
MS.gene06124.t1 MTR_8g093880 40.182 550 294 16 63 596 256 786 1.45e-132 409
MS.gene06124.t1 MTR_5g083150 39.810 525 278 15 107 620 101 598 5.36e-130 395
MS.gene06124.t1 MTR_1g051055 36.305 617 342 12 25 621 19 604 5.82e-130 395
MS.gene06124.t1 MTR_5g021100 38.951 534 290 14 101 620 322 833 3.67e-129 400
MS.gene06124.t1 MTR_3g071530 38.388 521 287 8 107 620 153 646 2.36e-128 392
MS.gene06124.t1 MTR_8g076650 38.752 529 297 11 101 620 380 890 2.39e-124 389
MS.gene06124.t1 MTR_1g022255 34.981 526 293 15 108 620 210 699 2.26e-97 313
MS.gene06124.t1 MTR_4g083030 32.613 555 328 15 87 619 73 603 6.11e-96 307
MS.gene06124.t1 MTR_3g074780 32.155 566 316 16 95 620 151 688 2.02e-94 305
MS.gene06124.t1 MTR_5g064080 31.429 560 324 16 96 624 144 674 6.15e-92 298
MS.gene06124.t1 MTR_1g022255 29.517 393 234 12 108 488 210 571 2.45e-50 184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06124.t1 AT1G33170 71.520 625 160 4 16 622 12 636 0.0 959
MS.gene06124.t1 AT4G10440 70.906 629 173 5 1 626 1 622 0.0 939
MS.gene06124.t1 AT2G45750 58.576 618 241 6 17 626 11 621 0.0 761
MS.gene06124.t1 AT4G00750 55.217 623 265 5 15 629 15 631 0.0 738
MS.gene06124.t1 AT1G26850 55.354 607 246 5 25 621 18 609 0.0 712
MS.gene06124.t1 AT1G26850 55.354 607 246 5 25 621 18 609 0.0 712
MS.gene06124.t1 AT4G18030 52.674 617 272 8 12 623 5 606 0.0 677
MS.gene06124.t1 AT2G43200 50.860 523 251 4 98 618 91 609 0.0 595
MS.gene06124.t1 AT2G43200 50.860 523 251 4 98 618 91 609 0.0 595
MS.gene06124.t1 AT1G26850 54.600 500 202 5 25 514 18 502 0.0 565
MS.gene06124.t1 AT1G31850 47.917 528 263 8 98 620 76 596 0.0 539
MS.gene06124.t1 AT1G31850 47.917 528 263 8 98 620 76 596 0.0 539
MS.gene06124.t1 AT1G31850 47.917 528 263 8 98 620 76 596 0.0 539
MS.gene06124.t1 AT1G31850 47.917 528 263 8 98 620 76 596 0.0 539
MS.gene06124.t1 AT4G19120 46.715 548 274 9 82 620 52 590 0.0 530
MS.gene06124.t1 AT4G19120 46.715 548 274 9 82 620 52 590 0.0 530
MS.gene06124.t1 AT4G00740 43.182 528 274 7 101 620 84 593 1.18e-158 469
MS.gene06124.t1 AT4G00740 43.182 528 274 7 101 620 84 593 1.18e-158 469
MS.gene06124.t1 AT5G06050 40.422 569 295 12 71 619 119 663 2.57e-154 460
MS.gene06124.t1 AT4G19120 46.930 456 225 8 82 528 52 499 1.70e-150 444
MS.gene06124.t1 AT2G39750 39.831 590 306 13 52 617 125 689 1.64e-149 448
MS.gene06124.t1 AT1G77260 41.917 532 282 10 95 617 140 653 1.27e-147 442
MS.gene06124.t1 AT1G04430 42.336 548 277 12 96 620 82 613 3.91e-146 437
MS.gene06124.t1 AT1G04430 42.336 548 277 12 96 620 82 613 3.91e-146 437
MS.gene06124.t1 AT1G04430 42.336 548 277 12 96 620 82 613 3.91e-146 437
MS.gene06124.t1 AT4G14360 43.883 515 259 12 96 596 74 572 1.02e-145 436
MS.gene06124.t1 AT4G14360 43.883 515 259 12 96 596 74 572 1.02e-145 436
MS.gene06124.t1 AT3G23300 42.144 541 281 13 96 620 77 601 4.95e-144 431
MS.gene06124.t1 AT3G23300 42.144 541 281 13 96 620 77 601 4.95e-144 431
MS.gene06124.t1 AT5G14430 42.647 544 278 14 96 621 78 605 1.94e-139 420
MS.gene06124.t1 AT5G14430 42.279 544 280 14 96 621 78 605 1.84e-138 417
MS.gene06124.t1 AT2G34300 40.208 577 307 16 58 620 205 757 3.86e-136 416
MS.gene06124.t1 AT2G34300 40.208 577 307 16 58 620 205 757 3.86e-136 416
MS.gene06124.t1 AT2G34300 40.208 577 307 16 58 620 205 757 3.86e-136 416
MS.gene06124.t1 AT1G29470 42.135 534 276 15 101 620 243 757 2.16e-135 414
MS.gene06124.t1 AT1G29470 42.135 534 276 15 101 620 243 757 2.16e-135 414
MS.gene06124.t1 AT2G40280 40.571 525 268 13 107 620 90 581 1.03e-133 404
MS.gene06124.t1 AT5G64030 39.062 576 308 16 63 620 266 816 9.42e-132 407
MS.gene06124.t1 AT3G51070 40.706 538 279 16 101 620 374 889 4.43e-130 404
MS.gene06124.t1 AT3G56080 39.734 526 274 15 107 620 114 608 3.87e-129 393
MS.gene06124.t1 AT3G10200 37.313 536 300 9 101 621 75 589 9.10e-129 392
MS.gene06124.t1 AT5G04060 36.517 534 305 8 101 621 86 598 7.21e-127 387
MS.gene06124.t1 AT3G10200 39.175 485 260 8 101 571 75 538 1.04e-122 376
MS.gene06124.t1 AT3G51070 42.766 470 237 14 101 554 374 827 3.32e-116 366
MS.gene06124.t1 AT3G56080 41.087 460 236 14 107 554 114 550 1.20e-114 354
MS.gene06124.t1 AT1G19430 35.038 528 291 17 108 620 232 722 2.81e-95 308
MS.gene06124.t1 AT1G19430 35.038 528 291 17 108 620 232 722 2.81e-95 308
MS.gene06124.t1 AT1G13860 32.613 555 308 15 95 617 78 598 1.81e-93 300
MS.gene06124.t1 AT1G13860 32.613 555 308 15 95 617 78 598 1.81e-93 300
MS.gene06124.t1 AT1G13860 32.613 555 308 15 95 617 78 598 1.81e-93 300
MS.gene06124.t1 AT1G13860 32.613 555 308 15 95 617 78 598 1.81e-93 300
MS.gene06124.t1 AT2G03480 31.119 572 319 14 77 619 67 592 2.38e-90 292
MS.gene06124.t1 AT2G03480 31.607 560 343 13 77 619 67 603 7.74e-89 288
MS.gene06124.t1 AT1G78240 31.004 558 328 17 96 619 144 678 2.16e-87 286
MS.gene06124.t1 AT1G78240 31.004 558 328 17 96 619 144 678 2.16e-87 286
MS.gene06124.t1 AT1G13860 33.693 463 255 13 184 617 3 442 9.83e-82 265
MS.gene06124.t1 AT1G19430 31.313 396 226 14 108 489 232 595 1.15e-53 194
MS.gene06124.t1 AT2G03480 30.792 341 217 6 77 408 67 397 9.46e-52 184

Find 140 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTTATTGGATTCTTTC+TGG 0.100373 4.2:-3829922 MS.gene06124:CDS
TTAAAAGGTGTCTTATATTT+TGG 0.133343 4.2:+3830758 None:intergenic
TTGAGAAAGCTGTTCAAAAT+TGG 0.200150 4.2:-3830676 MS.gene06124:CDS
ATTCATGCAGCTGGTGTATT+TGG 0.210043 4.2:-3829088 MS.gene06124:CDS
TCCTTAGGCCAGGTGGTTAT+TGG 0.243011 4.2:-3829933 MS.gene06124:CDS
CTACTTTGAGGCCATTTAAA+AGG 0.243262 4.2:+3830743 None:intergenic
CTCATTCCATGGAGCAAATA+TGG 0.258315 4.2:-3830182 MS.gene06124:intron
TTCAAAAGGACAATGAATTA+TGG 0.259353 4.2:-3829360 MS.gene06124:CDS
CTATATCTTCCTTGAGCAAT+AGG 0.274060 4.2:+3829304 None:intergenic
GCGTTTGGCAACTTCCTCTA+TGG 0.300697 4.2:+3829825 None:intergenic
CATTATTAAAATTTCCAGTT+TGG 0.305235 4.2:-3829237 MS.gene06124:CDS
ACAGAAACATGTTGAAATAT+AGG 0.306859 4.2:-3830835 MS.gene06124:CDS
CAACATTACTGTTATACTAT+TGG 0.313122 4.2:-3828853 MS.gene06124:CDS
TCACTTGAAATAAGTACTTC+TGG 0.335289 4.2:-3830941 MS.gene06124:CDS
GGAAGAAATACTGGAGGGGC+TGG 0.344229 4.2:-3829885 MS.gene06124:CDS
ATTGAACCACTACTAATTCT+AGG 0.344619 4.2:+3829406 None:intergenic
ATTATTAAAATTTCCAGTTT+GGG 0.346106 4.2:-3829236 MS.gene06124:CDS
CAGTATTTCTTCCATCTAAT+AGG 0.347198 4.2:+3829895 None:intergenic
AATTATAAAGGTAGCAAGTT+GGG 0.358008 4.2:-3830381 MS.gene06124:intron
CCATGTGAGTCTATTTCTCT+TGG 0.358721 4.2:+3831147 None:intergenic
ATCTTTGAAAGAGGTTTCAT+TGG 0.366006 4.2:-3829166 MS.gene06124:CDS
TTTCTGGCCCACCTATTAGA+TGG 0.370798 4.2:-3829906 MS.gene06124:CDS
TGGTGATCCATTGTAATCCT+TGG 0.371322 4.2:+3831192 None:intergenic
TCAAGCTGATTATAATGCTT+TGG 0.372036 4.2:+3831172 None:intergenic
CAGAAACATGTTGAAATATA+GGG 0.373112 4.2:-3830834 MS.gene06124:CDS
TTGCTTGAGCTGGTAACTTC+TGG 0.378404 4.2:+3829481 None:intergenic
GGTGATCCATTGTAATCCTT+GGG 0.378516 4.2:+3831193 None:intergenic
GCCATATCAAAAGCCCTTGC+TGG 0.383647 4.2:+3830221 None:intergenic
CTATTAGATGGAAGAAATAC+TGG 0.384247 4.2:-3829894 MS.gene06124:CDS
ATCAGAACTGCAATTGATAC+AGG 0.390635 4.2:-3830539 MS.gene06124:CDS
TGGTGTATTTGGCATATATC+AGG 0.393487 4.2:-3829077 MS.gene06124:CDS
TCCTGCTATGATTGGTATCA+TGG 0.402427 4.2:-3830264 MS.gene06124:CDS
ACAACATTCATAACCCAAAC+TGG 0.404193 4.2:+3829223 None:intergenic
TGAATGAGATCATAAGTTCT+AGG 0.405756 4.2:+3829106 None:intergenic
TCATTGGGACTTACCATGAT+TGG 0.417773 4.2:-3829150 MS.gene06124:CDS
TCCAGCTACTTTGCTTGAGC+TGG 0.418390 4.2:+3829471 None:intergenic
ATTGATATGAATGCTTATCT+TGG 0.425704 4.2:-3829274 MS.gene06124:CDS
TTTCTTCCAACATATGCGTT+TGG 0.430721 4.2:+3829810 None:intergenic
TATGCCTCAGATTGGTTAGT+AGG 0.432612 4.2:+3831058 None:intergenic
GTTTAGTTTGTACACATTCA+AGG 0.437945 4.2:+3829740 None:intergenic
GTTCTCGCTGCCTCATTCCA+TGG 0.445475 4.2:-3830193 MS.gene06124:CDS
CAAAATTGGATTCAAGTTGA+AGG 0.446164 4.2:-3830662 MS.gene06124:CDS
AGAAAGATGACCTTTCCATT+TGG 0.448933 4.2:-3829780 MS.gene06124:CDS
TCAAAAGTAGATTGTAATGT+TGG 0.460424 4.2:-3831034 MS.gene06124:CDS
AATTCAGCTCATGATACTCT+TGG 0.465587 4.2:-3829193 MS.gene06124:CDS
CAAGCATAATCTCTACTTTG+AGG 0.466308 4.2:+3830731 None:intergenic
AATTGCAGTTCTGATATTAC+CGG 0.466760 4.2:+3830547 None:intergenic
CCCAGAAAAGATTCTTGTTG+CGG 0.467901 4.2:-3828694 MS.gene06124:CDS
TCTTTGAAAGAGGTTTCATT+GGG 0.470943 4.2:-3829165 MS.gene06124:CDS
GGTGATCGGTTTCGATTCCC+TGG 0.472490 4.2:-3830641 MS.gene06124:CDS
GTATCATGAGCTGAATTTGA+AGG 0.474584 4.2:+3829199 None:intergenic
GAAGTGGAAGAGCAACATAA+TGG 0.475548 4.2:-3828739 MS.gene06124:CDS
TCCAATAACCACCTGGCCTA+AGG 0.482017 4.2:+3829932 None:intergenic
CTTGGTGCAATCTTTGAAAG+AGG 0.483757 4.2:-3829175 MS.gene06124:CDS
AGAAAGCTTCACACCAATCA+TGG 0.487974 4.2:+3829137 None:intergenic
TCAAAAGCCCTTGCTGGGTA+TGG 0.491448 4.2:+3830227 None:intergenic
ACCAGCTCAAGCAAAGTAGC+TGG 0.491717 4.2:-3829472 MS.gene06124:CDS
AATACTTACCAAGCCATGTC+AGG 0.492107 4.2:+3829679 None:intergenic
AGAGGAGTTCCTGCTATGAT+TGG 0.493820 4.2:-3830272 MS.gene06124:CDS
GATATGAATGCTTATCTTGG+TGG 0.494234 4.2:-3829271 MS.gene06124:CDS
CTGATAATCCTGACATGGCT+TGG 0.495727 4.2:-3829687 MS.gene06124:intron
TACTGTTATACTATTGGAGA+TGG 0.501641 4.2:-3828847 MS.gene06124:CDS
GGATTCAAGTTGAAGGTGAT+CGG 0.505103 4.2:-3830655 MS.gene06124:CDS
GAAGAAATACTGGAGGGGCT+GGG 0.506084 4.2:-3829884 MS.gene06124:CDS
TTTCCATGCACCCATTACAT+AGG 0.506215 4.2:+3831093 None:intergenic
AGCTCAGGTACAGTTTGCAT+TGG 0.506264 4.2:-3830297 MS.gene06124:CDS
TAATTATAAAGGTAGCAAGT+TGG 0.506609 4.2:-3830382 MS.gene06124:intron
CGGTTTCGATTCCCTGGTGG+AGG 0.508041 4.2:-3830635 MS.gene06124:CDS
CTGATATTACCGGTAGTAAG+AGG 0.508735 4.2:+3830557 None:intergenic
TGAGCTTCATGTGTATCTCT+TGG 0.511536 4.2:+3830314 None:intergenic
AATTTCTCTGCAGTGATGCT+TGG 0.514766 4.2:+3829382 None:intergenic
TATGATCTCATTCATGCAGC+TGG 0.517745 4.2:-3829097 MS.gene06124:CDS
GAGCTGGTAACTTCTGGTAA+TGG 0.518242 4.2:+3829487 None:intergenic
GAGCTTATTCCTCTTACTAC+CGG 0.518465 4.2:-3830566 MS.gene06124:CDS
CTGAATACAACTGTACCTTC+TGG 0.521917 4.2:+3828810 None:intergenic
CTCAAAGTAGAGATTATGCT+TGG 0.522721 4.2:-3830730 MS.gene06124:CDS
TGTAATGTTGGATCAACAGC+AGG 0.524580 4.2:-3831022 MS.gene06124:CDS
CGAGGACGATGATGAAATTG+AGG 0.528468 4.2:+3830994 None:intergenic
CACTGCAGAGAAATTTCAAA+AGG 0.531156 4.2:-3829374 MS.gene06124:CDS
TATTTCTTCCATCTAATAGG+TGG 0.536838 4.2:+3829898 None:intergenic
CCAGTCTGATAATCCTGACA+TGG 0.541896 4.2:-3829692 MS.gene06124:CDS
GGTACTGCAAAGGCACGTCT+TGG 0.542582 4.2:+3829430 None:intergenic
AAGAGATACACATGAAGCTC+AGG 0.543833 4.2:-3830312 MS.gene06124:CDS
CATATTTGCTCCATGGAATG+AGG 0.545022 4.2:+3830183 None:intergenic
GGAAACATGGTACCTCCACC+AGG 0.545167 4.2:+3830623 None:intergenic
CCATGTCAGGATTATCAGAC+TGG 0.545882 4.2:+3829692 None:intergenic
CCTCTAGCTGGATCTTGACA+TGG 0.546211 4.2:+3830869 None:intergenic
TTGAAGTGGATAGAGTCCTT+AGG 0.548105 4.2:-3829948 MS.gene06124:CDS
CCATATCAAAAGCCCTTGCT+GGG 0.549809 4.2:+3830222 None:intergenic
CATATCACTCCTATTGCTCA+AGG 0.550740 4.2:-3829313 MS.gene06124:CDS
GTGGATAGAGTCCTTAGGCC+AGG 0.552453 4.2:-3829943 MS.gene06124:CDS
CTCAAGCAAAGTAGCTGGAG+GGG 0.557038 4.2:-3829467 MS.gene06124:CDS
ATCAGCACCGCGAGGAAACA+TGG 0.563999 4.2:+3830610 None:intergenic
TACCAACCATATTTGCTCCA+TGG 0.566081 4.2:+3830176 None:intergenic
TGGTATGTATTTGATTGAAG+TGG 0.568021 4.2:-3829962 MS.gene06124:CDS
TATTTGGCATATATCAGGAT+AGG 0.572492 4.2:-3829072 MS.gene06124:intron
AACATAATGGATCATGAAAG+TGG 0.574348 4.2:-3828726 MS.gene06124:CDS
GAATGAGATCATAAGTTCTA+GGG 0.575775 4.2:+3829107 None:intergenic
GGTACAGTTGTATTCAGAGA+AGG 0.578876 4.2:-3828804 MS.gene06124:CDS
AAAGGCTACCATACCCAGCA+AGG 0.579111 4.2:-3830235 MS.gene06124:CDS
GCCATGATACCAATCATAGC+AGG 0.580506 4.2:+3830263 None:intergenic
ATTTCTTCCATCTAATAGGT+GGG 0.583039 4.2:+3829899 None:intergenic
GATAGAATCTTGAGGCCAGA+AGG 0.587910 4.2:-3828825 MS.gene06124:CDS
CCAAGAGAAATAGACTCACA+TGG 0.591381 4.2:-3831147 MS.gene06124:CDS
TTGAAATAAGTACTTCTGGT+GGG 0.591390 4.2:-3830937 MS.gene06124:CDS
ATTATAAAGGTAGCAAGTTG+GGG 0.592087 4.2:-3830380 MS.gene06124:intron
AAGTTGCCAAACGCATATGT+TGG 0.595240 4.2:-3829816 MS.gene06124:CDS
TTATCAGACTGGCAAATATG+TGG 0.598326 4.2:+3829703 None:intergenic
GTACAGTTTGCATTGGAGAG+AGG 0.599309 4.2:-3830290 MS.gene06124:CDS
AAAGGACAATGAATTATGGA+AGG 0.600355 4.2:-3829356 MS.gene06124:CDS
CTTGAAATAAGTACTTCTGG+TGG 0.600492 4.2:-3830938 MS.gene06124:CDS
GATCGGTTTCGATTCCCTGG+TGG 0.605900 4.2:-3830638 MS.gene06124:CDS
GCTCAAGCAAAGTAGCTGGA+GGG 0.607755 4.2:-3829468 MS.gene06124:CDS
AGCTCAAGCAAAGTAGCTGG+AGG 0.608310 4.2:-3829469 MS.gene06124:CDS
GCAAGAGCAAGATTCCATAG+AGG 0.609694 4.2:-3829839 MS.gene06124:CDS
TCAATGCTAAGCTCTTTGTG+TGG 0.613939 4.2:+3830695 None:intergenic
TGTCCTATGTAATGGGTGCA+TGG 0.614566 4.2:-3831096 MS.gene06124:CDS
GTGTTACTGATGCAATGAAG+TGG 0.625030 4.2:-3828755 MS.gene06124:CDS
GGGCTGGGAAAGAACTGAAG+AGG 0.627289 4.2:-3829869 MS.gene06124:CDS
TAGATGGAAGAAATACTGGA+GGG 0.629603 4.2:-3829890 MS.gene06124:CDS
TCACTATATGTCATGTCACA+TGG 0.634015 4.2:+3830899 None:intergenic
AGATGGAAGAAATACTGGAG+GGG 0.651671 4.2:-3829889 MS.gene06124:CDS
GAAAGAATCCAATAACCACC+TGG 0.654203 4.2:+3829925 None:intergenic
AAAATGCCCAAGGATTACAA+TGG 0.656503 4.2:-3831199 MS.gene06124:CDS
TCAGAACTGCAATTGATACA+GGG 0.660831 4.2:-3830538 MS.gene06124:CDS
AACACCTACTAACCAATCTG+AGG 0.662097 4.2:-3831062 MS.gene06124:CDS
TGGAGATGGATAGAATCTTG+AGG 0.664431 4.2:-3828833 MS.gene06124:CDS
CCATGTCAAGATCCAGCTAG+AGG 0.667824 4.2:-3830869 MS.gene06124:CDS
TTAGATGGAAGAAATACTGG+AGG 0.668874 4.2:-3829891 MS.gene06124:CDS
GTACCTCCTAGAATTAGTAG+TGG 0.671372 4.2:-3829412 MS.gene06124:CDS
AAGGCTACCATACCCAGCAA+GGG 0.674658 4.2:-3830234 MS.gene06124:CDS
ACTGCAATTGATACAGGGTG+TGG 0.682693 4.2:-3830533 MS.gene06124:CDS
AATTCTAGGAGGTACTGCAA+AGG 0.682768 4.2:+3829420 None:intergenic
GAACCACTACTAATTCTAGG+AGG 0.691410 4.2:+3829409 None:intergenic
CTATATGTCATGTCACATGG+TGG 0.691797 4.2:+3830902 None:intergenic
TTGGTATCATGGCTTCACAA+AGG 0.696029 4.2:-3830253 MS.gene06124:CDS
GATAGAGTCCTTAGGCCAGG+TGG 0.700562 4.2:-3829940 MS.gene06124:CDS
GGAGGTACCATGTTTCCTCG+CGG 0.714635 4.2:-3830617 MS.gene06124:CDS
GAAACATGGTACCTCCACCA+GGG 0.720834 4.2:+3830624 None:intergenic
ATGTACGCATCAGCACCGCG+AGG 0.786908 4.2:+3830602 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAAAATTTCCAGTTT+GGG - chr4.2:3830610-3830629 MS.gene06124:CDS 15.0%
!!! ATTTAACCTTGTAATTTTAA+AGG + chr4.2:3830199-3830218 None:intergenic 15.0%
!!! TTTAACCTTGTAATTTTAAA+GGG + chr4.2:3830198-3830217 None:intergenic 15.0%
!! AATTAATTGTTATGTATGGA+AGG - chr4.2:3830968-3830987 MS.gene06124:CDS 20.0%
!! ACTGAATTAATTGTTATGTA+TGG - chr4.2:3830964-3830983 MS.gene06124:CDS 20.0%
!! CAAATTCAAATCAAATGTTA+GGG - chr4.2:3829398-3829417 MS.gene06124:CDS 20.0%
!! CATTATTAAAATTTCCAGTT+TGG - chr4.2:3830609-3830628 MS.gene06124:CDS 20.0%
!! TACATGATATTATAAGTTGT+TGG - chr4.2:3830841-3830860 MS.gene06124:CDS 20.0%
!! TCAAATTCAAATCAAATGTT+AGG - chr4.2:3829397-3829416 MS.gene06124:CDS 20.0%
!! TCATGTGAATCTAATTATAA+AGG - chr4.2:3829453-3829472 MS.gene06124:CDS 20.0%
!! TTATAATTAGATTCACATGA+AGG + chr4.2:3829453-3829472 None:intergenic 20.0%
!!! AATATAAGACACCTTTTAAA+TGG - chr4.2:3829092-3829111 MS.gene06124:CDS 20.0%
!!! ATCAAATTTTAAACATGCAA+AGG + chr4.2:3830266-3830285 None:intergenic 20.0%
!!! ATTAGTTTATTACTTATGGT+CGG + chr4.2:3829833-3829852 None:intergenic 20.0%
!!! GCATATTAGTTTATTACTTA+TGG + chr4.2:3829837-3829856 None:intergenic 20.0%
!!! TACCAAAACATATTTTTATG+AGG + chr4.2:3830243-3830262 None:intergenic 20.0%
!!! TGTTTGATTTGCATTTAAAA+AGG - chr4.2:3830309-3830328 MS.gene06124:CDS 20.0%
!!! TTAAAAGGTGTCTTATATTT+TGG + chr4.2:3829091-3829110 None:intergenic 20.0%
!!! TTTAAAAAGGTACCAAAATA+TGG - chr4.2:3830322-3830341 MS.gene06124:CDS 20.0%
!!! TTTTTATTTGCTACACAATT+TGG - chr4.2:3829708-3829727 MS.gene06124:CDS 20.0%
! AATTATAAAGGTAGCAAGTT+GGG - chr4.2:3829465-3829484 MS.gene06124:CDS 25.0%
! ACAGAAACATGTTGAAATAT+AGG - chr4.2:3829011-3829030 MS.gene06124:intron 25.0%
! ATTGAAAATCATCTATCAGT+TGG - chr4.2:3830908-3830927 MS.gene06124:CDS 25.0%
! ATTGATATGAATGCTTATCT+TGG - chr4.2:3830572-3830591 MS.gene06124:CDS 25.0%
! CAACATTACTGTTATACTAT+TGG - chr4.2:3830993-3831012 MS.gene06124:CDS 25.0%
! CAGAAACATGTTGAAATATA+GGG - chr4.2:3829012-3829031 MS.gene06124:intron 25.0%
! TAATTATAAAGGTAGCAAGT+TGG - chr4.2:3829464-3829483 MS.gene06124:CDS 25.0%
! TCAAAAGTAGATTGTAATGT+TGG - chr4.2:3828812-3828831 MS.gene06124:CDS 25.0%
! TTCAAAAGGACAATGAATTA+TGG - chr4.2:3830486-3830505 MS.gene06124:intron 25.0%
!! ATGTATTTTGTCCTATGTAA+TGG - chr4.2:3828742-3828761 MS.gene06124:CDS 25.0%
!! CACCTCATAAAAATATGTTT+TGG - chr4.2:3830238-3830257 MS.gene06124:CDS 25.0%
!! CTTTCTTCTTTAAGAATAAG+AGG + chr4.2:3829791-3829810 None:intergenic 25.0%
!! TGTATTTTGTCCTATGTAAT+GGG - chr4.2:3828743-3828762 MS.gene06124:CDS 25.0%
!! TTATGCACTTTTCCATATTT+TGG + chr4.2:3830337-3830356 None:intergenic 25.0%
!! TTGAATTTGAGATGTACAAA+GGG + chr4.2:3829387-3829406 None:intergenic 25.0%
!! TTTGAATTTGAGATGTACAA+AGG + chr4.2:3829388-3829407 None:intergenic 25.0%
!!! AAAATCTAATTTTGAAGACG+AGG + chr4.2:3828873-3828892 None:intergenic 25.0%
!!! CTTTACCCTTTAAAATTACA+AGG - chr4.2:3830190-3830209 MS.gene06124:CDS 25.0%
AAAGGACAATGAATTATGGA+AGG - chr4.2:3830490-3830509 MS.gene06124:intron 30.0%
AGCTACATGATTAGATAAAG+TGG + chr4.2:3830809-3830828 None:intergenic 30.0%
ATTATAAAGGTAGCAAGTTG+GGG - chr4.2:3829466-3829485 MS.gene06124:CDS 30.0%
ATTGAACCACTACTAATTCT+AGG + chr4.2:3830443-3830462 None:intergenic 30.0%
ATTTCTTCCATCTAATAGGT+GGG + chr4.2:3829950-3829969 None:intergenic 30.0%
CAGTATTTCTTCCATCTAAT+AGG + chr4.2:3829954-3829973 None:intergenic 30.0%
CTATTAGATGGAAGAAATAC+TGG - chr4.2:3829952-3829971 MS.gene06124:CDS 30.0%
GAATGAGATCATAAGTTCTA+GGG + chr4.2:3830742-3830761 None:intergenic 30.0%
GCAAATCAAACAGAGAAAAA+TGG + chr4.2:3830301-3830320 None:intergenic 30.0%
TACTGTTATACTATTGGAGA+TGG - chr4.2:3830999-3831018 MS.gene06124:CDS 30.0%
TATTTCTTCCATCTAATAGG+TGG + chr4.2:3829951-3829970 None:intergenic 30.0%
TATTTGGCATATATCAGGAT+AGG - chr4.2:3830774-3830793 MS.gene06124:CDS 30.0%
TCAAGCTGATTATAATGCTT+TGG + chr4.2:3828677-3828696 None:intergenic 30.0%
TCACTTGAAATAAGTACTTC+TGG - chr4.2:3828905-3828924 MS.gene06124:intron 30.0%
TGAATGAGATCATAAGTTCT+AGG + chr4.2:3830743-3830762 None:intergenic 30.0%
TGGTATGTATTTGATTGAAG+TGG - chr4.2:3829884-3829903 MS.gene06124:CDS 30.0%
TTGAAATAAGTACTTCTGGT+GGG - chr4.2:3828909-3828928 MS.gene06124:intron 30.0%
TTGAGAAAGCTGTTCAAAAT+TGG - chr4.2:3829170-3829189 MS.gene06124:CDS 30.0%
TTGTTGCGGAAAAAACTTAT+TGG - chr4.2:3831166-3831185 MS.gene06124:CDS 30.0%
! AAGAATCTTTTCTGGGTTAA+AGG + chr4.2:3831148-3831167 None:intergenic 30.0%
! AATAGACTCACATGGATTTT+AGG - chr4.2:3828707-3828726 MS.gene06124:CDS 30.0%
! AATTGCAGTTCTGATATTAC+CGG + chr4.2:3829302-3829321 None:intergenic 30.0%
! ACACATTCAAGGTGATTTTT+AGG + chr4.2:3830098-3830117 None:intergenic 30.0%
! AGAATCTTTTCTGGGTTAAA+GGG + chr4.2:3831147-3831166 None:intergenic 30.0%
! ATCTTTGAAAGAGGTTTCAT+TGG - chr4.2:3830680-3830699 MS.gene06124:CDS 30.0%
! CTATTATGTCCCTTTTCAAA+AGG + chr4.2:3829498-3829517 None:intergenic 30.0%
! TACAAAAGCTCTTCTTTTGT+AGG + chr4.2:3829049-3829068 None:intergenic 30.0%
! TCTTTGAAAGAGGTTTCATT+GGG - chr4.2:3830681-3830700 MS.gene06124:CDS 30.0%
! TTATTTGCTACACAATTTGG+TGG - chr4.2:3829711-3829730 MS.gene06124:CDS 30.0%
!! AACATAATGGATCATGAAAG+TGG - chr4.2:3831120-3831139 MS.gene06124:CDS 30.0%
!! ATTTTTAGGCTTTTGCCAAA+TGG + chr4.2:3830084-3830103 None:intergenic 30.0%
!! CAAAATTGGATTCAAGTTGA+AGG - chr4.2:3829184-3829203 MS.gene06124:CDS 30.0%
!! GTTTAGTTTGTACACATTCA+AGG + chr4.2:3830109-3830128 None:intergenic 30.0%
!!! AAAGGTGTCTTATATTTTGG+AGG + chr4.2:3829088-3829107 None:intergenic 30.0%
AATTCAGCTCATGATACTCT+TGG - chr4.2:3830653-3830672 MS.gene06124:CDS 35.0%
ACAACATTCATAACCCAAAC+TGG + chr4.2:3830626-3830645 None:intergenic 35.0%
AGAAAGATGACCTTTCCATT+TGG - chr4.2:3830066-3830085 MS.gene06124:intron 35.0%
ATCAGAACTGCAATTGATAC+AGG - chr4.2:3829307-3829326 MS.gene06124:CDS 35.0%
CAAGCATAATCTCTACTTTG+AGG + chr4.2:3829118-3829137 None:intergenic 35.0%
CACTGCAGAGAAATTTCAAA+AGG - chr4.2:3830472-3830491 MS.gene06124:intron 35.0%
CGGAAAAAACTTATTGGACT+GGG - chr4.2:3831172-3831191 MS.gene06124:CDS 35.0%
CTATATCTTCCTTGAGCAAT+AGG + chr4.2:3830545-3830564 None:intergenic 35.0%
CTCAAAGTAGAGATTATGCT+TGG - chr4.2:3829116-3829135 MS.gene06124:CDS 35.0%
CTTGAAATAAGTACTTCTGG+TGG - chr4.2:3828908-3828927 MS.gene06124:intron 35.0%
GATATGAATGCTTATCTTGG+TGG - chr4.2:3830575-3830594 MS.gene06124:CDS 35.0%
GGAAAAAACTTATTGGACTG+GGG - chr4.2:3831173-3831192 MS.gene06124:CDS 35.0%
GTATCATGAGCTGAATTTGA+AGG + chr4.2:3830650-3830669 None:intergenic 35.0%
TAGATGGAAGAAATACTGGA+GGG - chr4.2:3829956-3829975 MS.gene06124:CDS 35.0%
TCACTATATGTCATGTCACA+TGG + chr4.2:3828950-3828969 None:intergenic 35.0%
TCAGAACTGCAATTGATACA+GGG - chr4.2:3829308-3829327 MS.gene06124:CDS 35.0%
TGGTGTATTTGGCATATATC+AGG - chr4.2:3830769-3830788 MS.gene06124:CDS 35.0%
TTAGATGGAAGAAATACTGG+AGG - chr4.2:3829955-3829974 MS.gene06124:CDS 35.0%
TTATCAGACTGGCAAATATG+TGG + chr4.2:3830146-3830165 None:intergenic 35.0%
TTTCTTCCAACATATGCGTT+TGG + chr4.2:3830039-3830058 None:intergenic 35.0%
! GAAAAAACTTATTGGACTGG+GGG - chr4.2:3831174-3831193 MS.gene06124:CDS 35.0%
! TATGTCCCTTTTCAAAAGGT+AGG + chr4.2:3829494-3829513 None:intergenic 35.0%
! TCAAATTTTCTACCTCTAGC+TGG + chr4.2:3828992-3829011 None:intergenic 35.0%
!! ACATGGATTTTAGGTGTAAG+TGG - chr4.2:3828716-3828735 MS.gene06124:CDS 35.0%
!! CTACTTTGAGGCCATTTAAA+AGG + chr4.2:3829106-3829125 None:intergenic 35.0%
AACACCTACTAACCAATCTG+AGG - chr4.2:3828784-3828803 MS.gene06124:CDS 40.0%
AAGAGATACACATGAAGCTC+AGG - chr4.2:3829534-3829553 MS.gene06124:intron 40.0%
AAGTTGCCAAACGCATATGT+TGG - chr4.2:3830030-3830049 MS.gene06124:intron 40.0%
AATACATACCATCTGTGCCA+TGG + chr4.2:3829875-3829894 None:intergenic 40.0%
AATACTTACCAAGCCATGTC+AGG + chr4.2:3830170-3830189 None:intergenic 40.0%
AATTTCTCTGCAGTGATGCT+TGG + chr4.2:3830467-3830486 None:intergenic 40.0%
AGAAAGCTTCACACCAATCA+TGG + chr4.2:3830712-3830731 None:intergenic 40.0%
AGATGGAAGAAATACTGGAG+GGG - chr4.2:3829957-3829976 MS.gene06124:CDS 40.0%
ATTCATGCAGCTGGTGTATT+TGG - chr4.2:3830758-3830777 MS.gene06124:CDS 40.0%
CATATCACTCCTATTGCTCA+AGG - chr4.2:3830533-3830552 MS.gene06124:CDS 40.0%
CATATTTGCTCCATGGAATG+AGG + chr4.2:3829666-3829685 None:intergenic 40.0%
CCAAGAGAAATAGACTCACA+TGG - chr4.2:3828699-3828718 MS.gene06124:CDS 40.0%
CCCAGAAAAGATTCTTGTTG+CGG - chr4.2:3831152-3831171 MS.gene06124:CDS 40.0%
CTATATGTCATGTCACATGG+TGG + chr4.2:3828947-3828966 None:intergenic 40.0%
CTCATTCCATGGAGCAAATA+TGG - chr4.2:3829664-3829683 MS.gene06124:intron 40.0%
CTGAATACAACTGTACCTTC+TGG + chr4.2:3831039-3831058 None:intergenic 40.0%
CTGATATTACCGGTAGTAAG+AGG + chr4.2:3829292-3829311 None:intergenic 40.0%
GAAAGAATCCAATAACCACC+TGG + chr4.2:3829924-3829943 None:intergenic 40.0%
GAACCACTACTAATTCTAGG+AGG + chr4.2:3830440-3830459 None:intergenic 40.0%
GAAGTGGAAGAGCAACATAA+TGG - chr4.2:3831107-3831126 MS.gene06124:CDS 40.0%
GAGCTTATTCCTCTTACTAC+CGG - chr4.2:3829280-3829299 MS.gene06124:CDS 40.0%
GCAAGCTTTGCAAATTTCCA+TGG - chr4.2:3829855-3829874 MS.gene06124:CDS 40.0%
GCGGAAAAAACTTATTGGAC+TGG - chr4.2:3831171-3831190 MS.gene06124:CDS 40.0%
GGTACAGTTGTATTCAGAGA+AGG - chr4.2:3831042-3831061 MS.gene06124:CDS 40.0%
GGTGATCCATTGTAATCCTT+GGG + chr4.2:3828656-3828675 None:intergenic 40.0%
GGTGGTTATTGGATTCTTTC+TGG - chr4.2:3829924-3829943 MS.gene06124:CDS 40.0%
GTACCTCCTAGAATTAGTAG+TGG - chr4.2:3830434-3830453 MS.gene06124:intron 40.0%
TACCAACCATATTTGCTCCA+TGG + chr4.2:3829673-3829692 None:intergenic 40.0%
TATGATCTCATTCATGCAGC+TGG - chr4.2:3830749-3830768 MS.gene06124:CDS 40.0%
TCAATGCTAAGCTCTTTGTG+TGG + chr4.2:3829154-3829173 None:intergenic 40.0%
TCATTGGGACTTACCATGAT+TGG - chr4.2:3830696-3830715 MS.gene06124:CDS 40.0%
TCCTGCTATGATTGGTATCA+TGG - chr4.2:3829582-3829601 MS.gene06124:intron 40.0%
TGAGCTTCATGTGTATCTCT+TGG + chr4.2:3829535-3829554 None:intergenic 40.0%
TGGAGATGGATAGAATCTTG+AGG - chr4.2:3831013-3831032 MS.gene06124:CDS 40.0%
TGGCATATATCAGGATAGGT+TGG - chr4.2:3830778-3830797 MS.gene06124:CDS 40.0%
TGGTGATCCATTGTAATCCT+TGG + chr4.2:3828657-3828676 None:intergenic 40.0%
TGTAATGTTGGATCAACAGC+AGG - chr4.2:3828824-3828843 MS.gene06124:CDS 40.0%
TTCCATGGAGCAAATATGGT+TGG - chr4.2:3829668-3829687 MS.gene06124:intron 40.0%
TTGAAGTGGATAGAGTCCTT+AGG - chr4.2:3829898-3829917 MS.gene06124:CDS 40.0%
TTGGTATCATGGCTTCACAA+AGG - chr4.2:3829593-3829612 MS.gene06124:intron 40.0%
TTTCCATGCACCCATTACAT+AGG + chr4.2:3828756-3828775 None:intergenic 40.0%
! CCATGTGAGTCTATTTCTCT+TGG + chr4.2:3828702-3828721 None:intergenic 40.0%
! CCGCAACAAGAATCTTTTCT+GGG + chr4.2:3831155-3831174 None:intergenic 40.0%
! CTTGGTGCAATCTTTGAAAG+AGG - chr4.2:3830671-3830690 MS.gene06124:CDS 40.0%
! GTGTTACTGATGCAATGAAG+TGG - chr4.2:3831091-3831110 MS.gene06124:CDS 40.0%
! TAGGCTTTTGCCAAATGGAA+AGG + chr4.2:3830079-3830098 None:intergenic 40.0%
! TATGCCTCAGATTGGTTAGT+AGG + chr4.2:3828791-3828810 None:intergenic 40.0%
! TCCGCAACAAGAATCTTTTC+TGG + chr4.2:3831156-3831175 None:intergenic 40.0%
!! AATTCTAGGAGGTACTGCAA+AGG + chr4.2:3830429-3830448 None:intergenic 40.0%
!! CTTTTGAGTATGCCTCAGAT+TGG + chr4.2:3828799-3828818 None:intergenic 40.0%
!! GGATTCAAGTTGAAGGTGAT+CGG - chr4.2:3829191-3829210 MS.gene06124:CDS 40.0%
!! GTCTTATATTTTGGAGGAGC+AGG + chr4.2:3829082-3829101 None:intergenic 40.0%
ACTGCAATTGATACAGGGTG+TGG - chr4.2:3829313-3829332 MS.gene06124:CDS 45.0%
AGAGGAGTTCCTGCTATGAT+TGG - chr4.2:3829574-3829593 MS.gene06124:intron 45.0%
AGCTCAGGTACAGTTTGCAT+TGG - chr4.2:3829549-3829568 MS.gene06124:intron 45.0%
CCAGTCTGATAATCCTGACA+TGG - chr4.2:3830154-3830173 MS.gene06124:intron 45.0%
CCATATCAAAAGCCCTTGCT+GGG + chr4.2:3829627-3829646 None:intergenic 45.0%
CCATGTCAGGATTATCAGAC+TGG + chr4.2:3830157-3830176 None:intergenic 45.0%
CGAGGACGATGATGAAATTG+AGG + chr4.2:3828855-3828874 None:intergenic 45.0%
CTGATAATCCTGACATGGCT+TGG - chr4.2:3830159-3830178 MS.gene06124:intron 45.0%
CTGGAGGGGAACTAGAAAAA+TGG - chr4.2:3830393-3830412 MS.gene06124:intron 45.0%
GAGCTGGTAACTTCTGGTAA+TGG + chr4.2:3830362-3830381 None:intergenic 45.0%
GATAGAATCTTGAGGCCAGA+AGG - chr4.2:3831021-3831040 MS.gene06124:CDS 45.0%
GCAAATTTCCATGGCACAGA+TGG - chr4.2:3829864-3829883 MS.gene06124:CDS 45.0%
GCAAGAGCAAGATTCCATAG+AGG - chr4.2:3830007-3830026 MS.gene06124:intron 45.0%
GCCATGATACCAATCATAGC+AGG + chr4.2:3829586-3829605 None:intergenic 45.0%
GTACAGTTTGCATTGGAGAG+AGG - chr4.2:3829556-3829575 MS.gene06124:intron 45.0%
TTGCTTGAGCTGGTAACTTC+TGG + chr4.2:3830368-3830387 None:intergenic 45.0%
! TTTCTGGCCCACCTATTAGA+TGG - chr4.2:3829940-3829959 MS.gene06124:CDS 45.0%
!! GGGTGCCTACCTTTTGAAAA+GGG - chr4.2:3829486-3829505 MS.gene06124:CDS 45.0%
!! TGTCCTATGTAATGGGTGCA+TGG - chr4.2:3828750-3828769 MS.gene06124:CDS 45.0%
AAAGGCTACCATACCCAGCA+AGG - chr4.2:3829611-3829630 MS.gene06124:intron 50.0%
AAGGCTACCATACCCAGCAA+GGG - chr4.2:3829612-3829631 MS.gene06124:intron 50.0%
ACCAGCTCAAGCAAAGTAGC+TGG - chr4.2:3830374-3830393 MS.gene06124:CDS 50.0%
AGCTCAAGCAAAGTAGCTGG+AGG - chr4.2:3830377-3830396 MS.gene06124:intron 50.0%
CCATGTCAAGATCCAGCTAG+AGG - chr4.2:3828977-3828996 MS.gene06124:intron 50.0%
CCTCTAGCTGGATCTTGACA+TGG + chr4.2:3828980-3828999 None:intergenic 50.0%
CTCAAGCAAAGTAGCTGGAG+GGG - chr4.2:3830379-3830398 MS.gene06124:intron 50.0%
GAAACATGGTACCTCCACCA+GGG + chr4.2:3829225-3829244 None:intergenic 50.0%
GAAGAAATACTGGAGGGGCT+GGG - chr4.2:3829962-3829981 MS.gene06124:CDS 50.0%
GCCATATCAAAAGCCCTTGC+TGG + chr4.2:3829628-3829647 None:intergenic 50.0%
GCGTTTGGCAACTTCCTCTA+TGG + chr4.2:3830024-3830043 None:intergenic 50.0%
GCTCAAGCAAAGTAGCTGGA+GGG - chr4.2:3830378-3830397 MS.gene06124:intron 50.0%
TCAAAAGCCCTTGCTGGGTA+TGG + chr4.2:3829622-3829641 None:intergenic 50.0%
TCCAATAACCACCTGGCCTA+AGG + chr4.2:3829917-3829936 None:intergenic 50.0%
TCCTTAGGCCAGGTGGTTAT+TGG - chr4.2:3829913-3829932 MS.gene06124:CDS 50.0%
! CCCAGCAAGGGCTTTTGATA+TGG - chr4.2:3829624-3829643 MS.gene06124:intron 50.0%
! TCCAGCTACTTTGCTTGAGC+TGG + chr4.2:3830378-3830397 None:intergenic 50.0%
!! GGGGTGCCTACCTTTTGAAA+AGG - chr4.2:3829485-3829504 MS.gene06124:CDS 50.0%
ATCAGCACCGCGAGGAAACA+TGG + chr4.2:3829239-3829258 None:intergenic 55.0%
GATAGAGTCCTTAGGCCAGG+TGG - chr4.2:3829906-3829925 MS.gene06124:CDS 55.0%
GGAAACATGGTACCTCCACC+AGG + chr4.2:3829226-3829245 None:intergenic 55.0%
GGAAGAAATACTGGAGGGGC+TGG - chr4.2:3829961-3829980 MS.gene06124:CDS 55.0%
GGGCTGGGAAAGAACTGAAG+AGG - chr4.2:3829977-3829996 MS.gene06124:intron 55.0%
GTGGATAGAGTCCTTAGGCC+AGG - chr4.2:3829903-3829922 MS.gene06124:CDS 55.0%
GTTCTCGCTGCCTCATTCCA+TGG - chr4.2:3829653-3829672 MS.gene06124:intron 55.0%
! GATCGGTTTCGATTCCCTGG+TGG - chr4.2:3829208-3829227 MS.gene06124:CDS 55.0%
! GGTACTGCAAAGGCACGTCT+TGG + chr4.2:3830419-3830438 None:intergenic 55.0%
! GGTGATCGGTTTCGATTCCC+TGG - chr4.2:3829205-3829224 MS.gene06124:CDS 55.0%
!! GGAGGTACCATGTTTCCTCG+CGG - chr4.2:3829229-3829248 MS.gene06124:CDS 55.0%
ATGTACGCATCAGCACCGCG+AGG + chr4.2:3829247-3829266 None:intergenic 60.0%
CGGTTTCGATTCCCTGGTGG+AGG - chr4.2:3829211-3829230 MS.gene06124:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 3828650 3831218 3828650 ID=MS.gene06124
chr4.2 mRNA 3828650 3831218 3828650 ID=MS.gene06124.t1;Parent=MS.gene06124
chr4.2 exon 3830532 3831218 3830532 ID=MS.gene06124.t1.exon1;Parent=MS.gene06124.t1
chr4.2 CDS 3830532 3831218 3830532 ID=cds.MS.gene06124.t1;Parent=MS.gene06124.t1
chr4.2 exon 3830183 3830393 3830183 ID=MS.gene06124.t1.exon2;Parent=MS.gene06124.t1
chr4.2 CDS 3830183 3830393 3830183 ID=cds.MS.gene06124.t1;Parent=MS.gene06124.t1
chr4.2 exon 3829688 3829985 3829688 ID=MS.gene06124.t1.exon3;Parent=MS.gene06124.t1
chr4.2 CDS 3829688 3829985 3829688 ID=cds.MS.gene06124.t1;Parent=MS.gene06124.t1
chr4.2 exon 3829073 3829537 3829073 ID=MS.gene06124.t1.exon4;Parent=MS.gene06124.t1
chr4.2 CDS 3829073 3829537 3829073 ID=cds.MS.gene06124.t1;Parent=MS.gene06124.t1
chr4.2 exon 3828650 3828878 3828650 ID=MS.gene06124.t1.exon5;Parent=MS.gene06124.t1
chr4.2 CDS 3828650 3828878 3828650 ID=cds.MS.gene06124.t1;Parent=MS.gene06124.t1
Gene Sequence

>MS.gene06124

ATGCCCAAGGATTACAATGGATCACCAAAGCATTATAATCAGCTTGAATCCAAGAGAAATAGACTCACATGGATTTTAGGTGTAAGTGGTCTATGTATTTTGTCCTATGTAATGGGTGCATGGAAAAATACAGCAACACCTACTAACCAATCTGAGGCATACTCAAAAGTAGATTGTAATGTTGGATCAACAGCAGGTTCTTCCTCAATTTCATCATCGTCCTCGTCTTCAAAATTAGATTTTGCTAGTCATCATTCACTTGAAATAAGTACTTCTGGTGGGATAAAAGAGTTTCCACCATGTGACATGACATATAGTGAATACACACCATGTCAAGATCCAGCTAGAGGTAGAAAATTTGACAGAAACATGTTGAAATATAGGGAGAGACATTGTCCTACAAAAGAAGAGCTTTTGTATTGTCTTATACCTGCTCCTCCAAAATATAAGACACCTTTTAAATGGCCTCAAAGTAGAGATTATGCTTGGTATGATAATATTCCACACAAAGAGCTTAGCATTGAGAAAGCTGTTCAAAATTGGATTCAAGTTGAAGGTGATCGGTTTCGATTCCCTGGTGGAGGTACCATGTTTCCTCGCGGTGCTGATGCGTACATTGATGACATTAATGAGCTTATTCCTCTTACTACCGGTAATATCAGAACTGCAATTGATACAGGGTGTGGTGTAAGTTCATTCATCTATACACTTAATCATGATTTGTTTTATGTTTTCCCTTTGTACATCTCAAATTCAAATCAAATGTTAGGGTTATGCATATGTTGCTAACACTTTATATACCTTCATGTGAATCTAATTATAAAGGTAGCAAGTTGGGGTGCCTACCTTTTGAAAAGGGACATAATAGCAATGTCATTTGCACCAAGAGATACACATGAAGCTCAGGTACAGTTTGCATTGGAGAGAGGAGTTCCTGCTATGATTGGTATCATGGCTTCACAAAGGCTACCATACCCAGCAAGGGCTTTTGATATGGCTCATTGTTCTCGCTGCCTCATTCCATGGAGCAAATATGGTTGGTATTCACACTTCTACTATTTTTATTTGCTACACAATTTGGTGGTATTTTGCAATTAAGAGACAAATAGTCAATTAAGATTTAAGAGACATTTCAAGTCCTCTTATTCTTAAAGAAGAAAGAATTAAAAAAATTCTTATGCCGACCATAAGTAATAAACTAATATGCAAGCTTTGCAAATTTCCATGGCACAGATGGTATGTATTTGATTGAAGTGGATAGAGTCCTTAGGCCAGGTGGTTATTGGATTCTTTCTGGCCCACCTATTAGATGGAAGAAATACTGGAGGGGCTGGGAAAGAACTGAAGAGGATTTAAAGCAAGAGCAAGATTCCATAGAGGAAGTTGCCAAACGCATATGTTGGAAGAAAGTTGTTGAGAAAGATGACCTTTCCATTTGGCAAAAGCCTAAAAATCACCTTGAATGTGTACAAACTAAACAAGTCTTTAAAACACCACATATTTGCCAGTCTGATAATCCTGACATGGCTTGGTAAGTATTCTTTACCCTTTAAAATTACAAGGTTAAATTCTCTTAGCAGTGAACTTACACCTCATAAAAATATGTTTTGGTACCTTTGCATGTTTAAAATTTGATATATTTTGTTTACCATTTTTCTCTGTTTGATTTGCATTTAAAAAGGTACCAAAATATGGAAAAGTGCATAACTCCATTACCAGAAGTTACCAGCTCAAGCAAAGTAGCTGGAGGGGAACTAGAAAAATGGCCAAGACGTGCCTTTGCAGTACCTCCTAGAATTAGTAGTGGTTCAATACCAAGCATCACTGCAGAGAAATTTCAAAAGGACAATGAATTATGGAAGGACAGAATGTCACATTACAAGCATATCACTCCTATTGCTCAAGGAAGATATAGAAACATTATTGATATGAATGCTTATCTTGGTGGATTTGCAGCAGCATTATTAAAATTTCCAGTTTGGGTTATGAATGTTGTTCCTTCAAATTCAGCTCATGATACTCTTGGTGCAATCTTTGAAAGAGGTTTCATTGGGACTTACCATGATTGGTGTGAAGCTTTCTCAACTTACCCTAGAACTTATGATCTCATTCATGCAGCTGGTGTATTTGGCATATATCAGGATAGGTTGGTATTTCCACTTTATCTAATCATGTAGCTTTAATAATTTGTTACATGATATTATAAGTTGTTGGTGAAGTGCAGTATAGTCTCTAAAATCAAAGAAATGATTCTTGAAATTGAAAATCATCTATCAGTTGGTATCATTTCTATATGTTTTATCATGTGTTTTTGACTGAATTAATTGTTATGTATGGAAGGTGCAACATTACTGTTATACTATTGGAGATGGATAGAATCTTGAGGCCAGAAGGTACAGTTGTATTCAGAGAAGGAGTAGAGCTTCTCACAAAGATTAAAAGTGTTACTGATGCAATGAAGTGGAAGAGCAACATAATGGATCATGAAAGTGGACCCTTTAACCCAGAAAAGATTCTTGTTGCGGAAAAAACTTATTGGACTGGGGGAGCTAAAGATAATAGCAACTAA
Protein sequence

>MS.gene06124.t1

MPKDYNGSPKHYNQLESKRNRLTWILGVSGLCILSYVMGAWKNTATPTNQSEAYSKVDCNVGSTAGSSSISSSSSSSKLDFASHHSLEISTSGGIKEFPPCDMTYSEYTPCQDPARGRKFDRNMLKYRERHCPTKEELLYCLIPAPPKYKTPFKWPQSRDYAWYDNIPHKELSIEKAVQNWIQVEGDRFRFPGGGTMFPRGADAYIDDINELIPLTTGNIRTAIDTGCGVASWGAYLLKRDIIAMSFAPRDTHEAQVQFALERGVPAMIGIMASQRLPYPARAFDMAHCSRCLIPWSKYDGMYLIEVDRVLRPGGYWILSGPPIRWKKYWRGWERTEEDLKQEQDSIEEVAKRICWKKVVEKDDLSIWQKPKNHLECVQTKQVFKTPHICQSDNPDMAWYQNMEKCITPLPEVTSSSKVAGGELEKWPRRAFAVPPRISSGSIPSITAEKFQKDNELWKDRMSHYKHITPIAQGRYRNIIDMNAYLGGFAAALLKFPVWVMNVVPSNSAHDTLGAIFERGFIGTYHDWCEAFSTYPRTYDLIHAAGVFGIYQDRCNITVILLEMDRILRPEGTVVFREGVELLTKIKSVTDAMKWKSNIMDHESGPFNPEKILVAEKTYWTGGAKDNSN