AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42227

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42227.t1 MTR_7g076150 98.132 589 11 0 1 589 1 589 0.0 1209
MS.gene42227.t1 MTR_8g432620 78.512 605 111 3 1 589 1 602 0.0 969
MS.gene42227.t1 MTR_7g076150 97.982 446 9 0 144 589 1 446 0.0 911
MS.gene42227.t1 MTR_8g100075 45.591 533 264 8 73 587 96 620 7.68e-170 497
MS.gene42227.t1 MTR_1g101370 40.843 617 327 10 2 587 8 617 1.85e-168 493
MS.gene42227.t1 MTR_8g055840 45.203 542 269 8 62 587 71 600 6.95e-165 483
MS.gene42227.t1 MTR_8g432680 44.991 529 266 7 78 587 108 630 9.66e-165 484
MS.gene42227.t1 MTR_7g076170 46.226 530 257 9 78 587 104 625 1.37e-164 484
MS.gene42227.t1 MTR_5g040360 44.587 545 267 9 62 587 71 599 9.23e-163 478
MS.gene42227.t1 MTR_0019s0120 43.750 528 270 7 78 587 108 626 2.28e-161 475
MS.gene42227.t1 MTR_4g098890 45.946 555 259 12 54 586 67 602 1.04e-157 491
MS.gene42227.t1 MTR_8g071280 43.454 527 270 8 78 587 73 588 1.57e-155 459
MS.gene42227.t1 MTR_7g006060 43.470 536 269 10 75 585 43 569 7.58e-154 454
MS.gene42227.t1 MTR_3g040370 43.503 531 268 8 73 587 83 597 2.08e-150 446
MS.gene42227.t1 MTR_5g080720 41.953 553 292 11 50 586 100 639 6.16e-148 441
MS.gene42227.t1 MTR_5g026930 43.315 531 275 9 74 588 71 591 7.36e-147 437
MS.gene42227.t1 MTR_1g442840 40.669 568 308 9 42 587 55 615 2.21e-145 434
MS.gene42227.t1 MTR_1g442840 43.912 501 259 8 101 587 10 502 2.62e-145 430
MS.gene42227.t1 MTR_1g069785 38.648 577 328 9 29 587 17 585 1.82e-143 428
MS.gene42227.t1 MTR_3g096480 41.468 545 283 12 65 588 248 777 2.58e-143 434
MS.gene42227.t1 MTR_1g075900 41.296 540 292 9 66 587 82 614 6.36e-141 422
MS.gene42227.t1 MTR_5g083150 41.618 519 271 11 83 588 100 599 3.33e-140 420
MS.gene42227.t1 MTR_8g093880 41.667 528 267 14 84 588 298 807 1.03e-139 426
MS.gene42227.t1 MTR_3g088790 41.431 531 273 14 80 588 229 743 2.14e-139 423
MS.gene42227.t1 MTR_3g068990 42.344 529 278 11 73 586 151 667 1.20e-137 416
MS.gene42227.t1 MTR_5g021100 41.412 524 272 12 83 588 328 834 4.61e-136 417
MS.gene42227.t1 MTR_1g051055 40.189 530 292 9 75 589 86 605 3.07e-135 407
MS.gene42227.t1 MTR_3g071530 40.374 535 289 8 63 588 134 647 3.70e-135 409
MS.gene42227.t1 MTR_8g076650 41.538 520 276 9 83 588 386 891 1.81e-133 412
MS.gene42227.t1 MTR_1g029730 41.040 519 277 11 83 584 150 656 1.55e-130 397
MS.gene42227.t1 MTR_5g080720 42.708 480 252 10 50 513 100 572 2.61e-128 389
MS.gene42227.t1 MTR_0019s0120 43.256 430 223 6 78 489 108 534 5.58e-128 386
MS.gene42227.t1 MTR_5g026930 43.953 430 226 6 74 489 71 499 1.66e-120 366
MS.gene42227.t1 MTR_5g064080 33.092 553 324 12 65 588 136 671 1.66e-97 311
MS.gene42227.t1 MTR_4g083030 31.442 617 346 14 17 588 21 605 1.39e-94 302
MS.gene42227.t1 MTR_3g074780 32.605 549 326 14 73 588 152 689 5.98e-91 295
MS.gene42227.t1 MTR_1g022255 34.870 499 286 13 104 588 227 700 4.80e-90 293
MS.gene42227.t1 MTR_1g022255 30.028 363 228 10 104 454 227 575 7.13e-47 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42227.t1 AT4G00740 72.315 596 157 2 1 589 1 595 0.0 937
MS.gene42227.t1 AT4G00740 72.315 596 157 2 1 589 1 595 0.0 937
MS.gene42227.t1 AT4G00750 45.810 537 259 7 74 587 95 622 9.11e-167 489
MS.gene42227.t1 AT4G10440 44.587 545 273 9 63 587 81 616 1.16e-166 489
MS.gene42227.t1 AT1G33170 43.268 557 288 8 50 587 87 634 3.24e-165 485
MS.gene42227.t1 AT2G45750 44.527 539 269 8 74 589 86 617 4.00e-163 480
MS.gene42227.t1 AT1G31850 41.695 590 307 11 25 587 17 596 1.78e-160 472
MS.gene42227.t1 AT1G31850 41.695 590 307 11 25 587 17 596 1.78e-160 472
MS.gene42227.t1 AT1G31850 41.695 590 307 11 25 587 17 596 1.78e-160 472
MS.gene42227.t1 AT1G31850 41.695 590 307 11 25 587 17 596 1.78e-160 472
MS.gene42227.t1 AT1G26850 44.860 535 265 10 73 587 84 608 5.77e-159 469
MS.gene42227.t1 AT1G26850 44.860 535 265 10 73 587 84 608 5.77e-159 469
MS.gene42227.t1 AT4G19120 43.774 530 274 8 74 587 69 590 3.03e-158 466
MS.gene42227.t1 AT4G19120 43.774 530 274 8 74 587 69 590 3.03e-158 466
MS.gene42227.t1 AT4G18030 45.386 531 262 9 74 587 84 603 3.71e-157 464
MS.gene42227.t1 AT2G43200 43.429 525 273 9 78 586 94 610 4.05e-151 448
MS.gene42227.t1 AT2G43200 43.429 525 273 9 78 586 94 610 4.05e-151 448
MS.gene42227.t1 AT3G23300 41.989 543 288 9 65 587 66 601 4.81e-147 438
MS.gene42227.t1 AT3G23300 41.989 543 288 9 65 587 66 601 4.81e-147 438
MS.gene42227.t1 AT4G14360 43.676 506 263 7 73 563 74 572 2.08e-145 434
MS.gene42227.t1 AT4G14360 43.676 506 263 7 73 563 74 572 2.08e-145 434
MS.gene42227.t1 AT1G04430 37.851 605 331 9 22 587 15 613 1.83e-144 432
MS.gene42227.t1 AT1G04430 37.851 605 331 9 22 587 15 613 1.83e-144 432
MS.gene42227.t1 AT1G04430 37.851 605 331 9 22 587 15 613 1.83e-144 432
MS.gene42227.t1 AT2G34300 43.074 527 260 14 84 588 250 758 3.11e-143 433
MS.gene42227.t1 AT2G34300 43.074 527 260 14 84 588 250 758 3.11e-143 433
MS.gene42227.t1 AT2G34300 43.074 527 260 14 84 588 250 758 3.11e-143 433
MS.gene42227.t1 AT5G64030 42.803 528 261 13 84 588 308 817 3.77e-142 432
MS.gene42227.t1 AT1G29470 42.125 527 265 12 84 588 250 758 2.00e-140 426
MS.gene42227.t1 AT1G29470 42.125 527 265 12 84 588 250 758 2.00e-140 426
MS.gene42227.t1 AT1G77260 40.414 532 282 13 73 586 141 655 3.84e-138 416
MS.gene42227.t1 AT2G39750 40.977 532 281 13 73 586 175 691 4.64e-138 417
MS.gene42227.t1 AT5G06050 40.720 528 284 11 73 584 147 661 9.93e-138 416
MS.gene42227.t1 AT3G10200 41.026 546 289 11 60 589 62 590 2.26e-136 410
MS.gene42227.t1 AT3G51070 40.107 561 300 12 49 588 345 890 3.53e-134 414
MS.gene42227.t1 AT2G40280 40.000 560 288 16 46 588 54 582 1.67e-133 402
MS.gene42227.t1 AT5G14430 41.091 550 300 8 58 589 63 606 2.39e-133 403
MS.gene42227.t1 AT5G04060 39.338 544 299 9 60 589 73 599 2.77e-132 399
MS.gene42227.t1 AT5G14430 40.727 550 302 8 58 589 63 606 2.78e-131 397
MS.gene42227.t1 AT3G56080 41.120 518 270 13 84 588 114 609 4.90e-131 397
MS.gene42227.t1 AT4G19120 44.676 432 222 5 74 489 69 499 7.52e-131 392
MS.gene42227.t1 AT3G10200 42.596 493 253 9 60 538 62 538 4.69e-128 389
MS.gene42227.t1 AT3G51070 40.900 489 263 10 46 513 342 825 2.72e-120 375
MS.gene42227.t1 AT1G26850 44.928 414 205 8 73 467 84 493 4.80e-119 362
MS.gene42227.t1 AT3G56080 42.890 436 228 11 84 506 114 541 1.48e-116 357
MS.gene42227.t1 AT1G19430 35.192 520 301 12 81 588 228 723 8.63e-97 311
MS.gene42227.t1 AT1G19430 35.192 520 301 12 81 588 228 723 8.63e-97 311
MS.gene42227.t1 AT1G78240 33.396 533 320 12 73 576 144 670 4.51e-93 300
MS.gene42227.t1 AT1G78240 33.396 533 320 12 73 576 144 670 4.51e-93 300
MS.gene42227.t1 AT1G13860 32.370 519 298 11 106 588 101 602 1.26e-87 284
MS.gene42227.t1 AT1G13860 32.370 519 298 11 106 588 101 602 1.26e-87 284
MS.gene42227.t1 AT1G13860 32.370 519 298 11 106 588 101 602 1.26e-87 284
MS.gene42227.t1 AT1G13860 32.370 519 298 11 106 588 101 602 1.26e-87 284
MS.gene42227.t1 AT2G03480 30.839 548 310 11 73 588 84 594 1.35e-84 276
MS.gene42227.t1 AT2G03480 31.009 545 324 12 73 588 84 605 1.50e-82 270
MS.gene42227.t1 AT1G13860 32.538 461 265 9 159 588 1 446 5.99e-78 254
MS.gene42227.t1 AT1G19430 32.199 382 234 9 81 451 228 595 6.21e-55 196
MS.gene42227.t1 AT2G03480 28.750 320 211 5 73 377 84 401 2.10e-44 164

Find 179 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAGAACACCTCCATTTA+TGG 0.152108 7.3:-29637994 None:intergenic
AGACTTCCATTTCCTGCTTT+TGG 0.173148 7.3:+29638275 MS.gene42227:CDS
CACACCTTATGCATGCTTTC+AGG 0.213467 7.3:-29636048 None:intergenic
GAGAAAGAGTAATGAGAAAA+AGG 0.217310 7.3:-29635728 None:intergenic
TTACTTCAGGTTGCTAGTTT+TGG 0.217337 7.3:+29638128 MS.gene42227:intron
ATTGAGGAAGGGATGTTAAA+TGG 0.234055 7.3:+29635844 MS.gene42227:CDS
ATCTTTGACAGAGGACTTAT+TGG 0.248824 7.3:+29639170 MS.gene42227:CDS
CTTGAATTATGTGATGATTC+TGG 0.250630 7.3:+29638658 MS.gene42227:CDS
ATGGACATGAATGCATTATA+TGG 0.268695 7.3:+29639065 MS.gene42227:CDS
GTTCGAGGGTATGTTGAAAA+AGG 0.289047 7.3:-29639680 None:intergenic
AGTCAATACATTCCCATAAA+TGG 0.293619 7.3:+29637981 MS.gene42227:CDS
TCCTGTTCGGTGGGCTAAAC+AGG 0.305359 7.3:+29638504 MS.gene42227:CDS
GTCAGGTTCTTTATCATAAA+TGG 0.310121 7.3:-29640499 None:intergenic
GCCTAATGGGTATCGGGTTC+CGG 0.340054 7.3:+29636017 MS.gene42227:CDS
CCTGTCAGCAATCTTGTTGT+GGG 0.348589 7.3:-29637856 None:intergenic
TTGACTTGGTTCATTGTTCT+CGG 0.348912 7.3:+29638300 MS.gene42227:CDS
GTAGAGAGATGAATTACTAT+AGG 0.350347 7.3:+29635944 MS.gene42227:CDS
CCTTGGTCGCCGCCGTGTGC+TGG 0.360888 7.3:+29635774 MS.gene42227:CDS
CTTCCTAATGGAAATGAGTT+TGG 0.361568 7.3:+29638634 MS.gene42227:CDS
CGCTACTTTGTCAATTACTT+CGG 0.361871 7.3:-29640445 None:intergenic
TAGAGAGATGAATTACTATA+GGG 0.363989 7.3:+29635945 MS.gene42227:CDS
GTTTGATTCCACCGCCTAAT+GGG 0.364461 7.3:+29636004 MS.gene42227:CDS
GGAGAGACATTGTCCTTTGC+CGG 0.366173 7.3:+29635966 MS.gene42227:CDS
ATGTAATATTGTTGATTTGA+TGG 0.368215 7.3:+29640368 MS.gene42227:CDS
TCCATAACGTTGCGTATTGA+TGG 0.372172 7.3:-29639047 None:intergenic
TGTTTGATTCCACCGCCTAA+TGG 0.375674 7.3:+29636003 MS.gene42227:CDS
ATATGATCCACCTCACTTGC+AGG 0.378217 7.3:-29635886 None:intergenic
ATATATTGTTCTGCTCCATC+TGG 0.387453 7.3:-29637948 None:intergenic
GCTACTTTGTCAATTACTTC+GGG 0.391864 7.3:-29640444 None:intergenic
AGACCAAACTCATTTCCATT+AGG 0.395331 7.3:-29638637 None:intergenic
ATCAAAGGAGATTATGCTAT+TGG 0.396451 7.3:+29638873 MS.gene42227:CDS
TCCTGTCAGCAATCTTGTTG+TGG 0.396608 7.3:-29637857 None:intergenic
TTGAATTATGTGATGATTCT+GGG 0.400181 7.3:+29638659 MS.gene42227:CDS
TCCTGTTTAGCCCACCGAAC+AGG 0.405950 7.3:-29638505 None:intergenic
AATTCACTAAATATAAAGTT+GGG 0.410505 7.3:+29639020 MS.gene42227:CDS
TCCATCAATACGCAACGTTA+TGG 0.412610 7.3:+29639046 MS.gene42227:CDS
TCAAATCCAAAAGCAGGAAA+TGG 0.413279 7.3:-29638281 None:intergenic
TACATGAAAACACTGCAATC+TGG 0.414035 7.3:+29638587 MS.gene42227:CDS
CTCAGAACACCTCCATTTAT+GGG 0.417404 7.3:-29637993 None:intergenic
GCAGATTCGTGTCTTCCTAA+TGG 0.418281 7.3:+29638622 MS.gene42227:CDS
CCGTCTTGTGGTGGCTATTG+AGG 0.420421 7.3:+29635828 MS.gene42227:CDS
TTGAGGAAGGGATGTTAAAT+GGG 0.428861 7.3:+29635845 MS.gene42227:CDS
TGCAACTTATTTCATTGAAG+TGG 0.430659 7.3:+29638438 MS.gene42227:CDS
GGTGCGGCAGTTAGCCTCTC+TGG 0.433582 7.3:-29638912 None:intergenic
TGCTGACAGGAAAGGTCACC+AGG 0.435156 7.3:+29637869 MS.gene42227:CDS
TTCCACCGCCTAATGGGTAT+CGG 0.445816 7.3:+29636010 MS.gene42227:CDS
AAATTTACCAAGCTTGACTT+AGG 0.450311 7.3:-29638684 None:intergenic
TGGACATGAATGCATTATAT+GGG 0.450687 7.3:+29639066 MS.gene42227:CDS
TGCGATTTATGTGAATCTCT+TGG 0.452077 7.3:-29638194 None:intergenic
ATCGCAGATACAATTTGCCT+TGG 0.452382 7.3:+29638211 MS.gene42227:CDS
AGTTAGCCTCTCTGGCCACT+TGG 0.453186 7.3:-29638904 None:intergenic
CGTGTGTTGGTGCGTTTCCA+TGG 0.459289 7.3:-29635673 None:intergenic
TGCCTTGGAAAGAGGAATAC+CGG 0.462056 7.3:+29638226 MS.gene42227:CDS
GAATTCACTAAATATAAAGT+TGG 0.462143 7.3:+29639019 MS.gene42227:CDS
AACTTACTGTAGGCTGTAAA+CGG 0.470172 7.3:-29638332 None:intergenic
CCAGCACACGGCGGCGACCA+AGG 0.472017 7.3:-29635774 None:intergenic
TTAGAGCTTCCATAAGGTCT+TGG 0.472115 7.3:-29640553 None:intergenic
GGCTAACTGCCGCACCTTCG+AGG 0.477419 7.3:+29638919 MS.gene42227:CDS
TCATCTCCGGTCCTCCTGTT+CGG 0.477553 7.3:+29638491 MS.gene42227:CDS
ACTGCACTTGACATGGGATG+TGG 0.486235 7.3:+29638017 MS.gene42227:CDS
TTATTGGTGTCTATCATGAT+TGG 0.487456 7.3:+29639186 MS.gene42227:CDS
CTCCGGTCCTCCTGTTCGGT+GGG 0.487962 7.3:+29638495 MS.gene42227:CDS
AGGTCCCCTCTCCTGAAAAC+CGG 0.489154 7.3:+29638939 MS.gene42227:CDS
AAAAGAATGGTCAGATCTCC+AGG 0.491502 7.3:+29638528 MS.gene42227:CDS
TCTCCGGTCCTCCTGTTCGG+TGG 0.493729 7.3:+29638494 MS.gene42227:CDS
AAACAAACCGCAGTCTCCTC+CGG 0.498274 7.3:-29635985 None:intergenic
ATACAATTTGCCTTGGAAAG+AGG 0.505244 7.3:+29638218 MS.gene42227:CDS
ACAAGGCCTTTGCCACAGCC+TGG 0.506176 7.3:-29638546 None:intergenic
CTTATAAAAGATCCAGCTAC+TGG 0.507119 7.3:+29639737 MS.gene42227:CDS
TGGAAACATCGTACCACCAC+CGG 0.508503 7.3:-29637928 None:intergenic
TCCACCGCCTAATGGGTATC+GGG 0.510810 7.3:+29636011 MS.gene42227:CDS
CTTCTCGTTTCATCCACCCC+TGG 0.511990 7.3:-29637887 None:intergenic
CTTGTGGTGGCTATTGAGGA+AGG 0.519378 7.3:+29635832 MS.gene42227:CDS
ACAAGACGGTTGCGCTGTTG+TGG 0.521805 7.3:-29635814 None:intergenic
CTGTCAGCAATCTTGTTGTG+GGG 0.522422 7.3:-29637855 None:intergenic
GTTAGCCTCTCTGGCCACTT+GGG 0.524844 7.3:-29638903 None:intergenic
ACCAAGTCAAATCCAAAAGC+AGG 0.525653 7.3:-29638287 None:intergenic
AACGCACCAACACACGTCAA+TGG 0.527589 7.3:+29635680 MS.gene42227:CDS
AGATCTCCAGGCTGTGGCAA+AGG 0.528686 7.3:+29638540 MS.gene42227:CDS
GGTATCGGGTTCCGGTGAGG+TGG 0.533757 7.3:+29636025 MS.gene42227:CDS
CACTAAGCTGTGGGTACGGA+GGG 0.534730 7.3:+29638983 MS.gene42227:CDS
CAGCACACGGCGGCGACCAA+GGG 0.536436 7.3:-29635773 None:intergenic
GCGGCCGGAGGGAACTGTTG+TGG 0.538147 7.3:+29640410 MS.gene42227:CDS
CACTTTATATTCCCCGGTGG+TGG 0.538896 7.3:+29637915 MS.gene42227:CDS
GTTAAATGGGAAGAGTATTG+AGG 0.539727 7.3:+29635858 MS.gene42227:CDS
GGAAGACACGAATCTGCTGC+TGG 0.540770 7.3:-29638616 None:intergenic
TCTGAGGACTGCACTTGACA+TGG 0.541511 7.3:+29638010 MS.gene42227:CDS
CCAAGCATAGCAACAAAAGC+CGG 0.542023 7.3:-29638245 None:intergenic
ACCGCAGTCTCCTCCGGCAA+AGG 0.543088 7.3:-29635979 None:intergenic
AACCGGTGTTGATGTATATG+AGG 0.547717 7.3:+29638956 MS.gene42227:CDS
CTGGGGACCTAAGTCAAGCT+TGG 0.550202 7.3:+29638677 MS.gene42227:CDS
TAATATTGTTGATTTGATGG+TGG 0.554493 7.3:+29640371 MS.gene42227:CDS
AGCCGGTATTCCTCTTTCCA+AGG 0.555587 7.3:-29638228 None:intergenic
TGTTGGTGCGTTTCCATGGT+GGG 0.555874 7.3:-29635669 None:intergenic
CTTGATGCGATCTTTGACAG+AGG 0.556268 7.3:+29639161 MS.gene42227:CDS
GGTGGATATCTAGTCATCTC+CGG 0.556504 7.3:+29638478 MS.gene42227:CDS
TCCTTTGCCGGAGGAGACTG+CGG 0.558889 7.3:+29635978 MS.gene42227:CDS
ACAGGAAAGGTCACCAGGGG+TGG 0.559143 7.3:+29637874 MS.gene42227:CDS
CTGCACTTGACATGGGATGT+GGG 0.561100 7.3:+29638018 MS.gene42227:CDS
GGTCAACACTTTATATTCCC+CGG 0.564775 7.3:+29637909 MS.gene42227:CDS
AGCCCACCGAACAGGAGGAC+CGG 0.567603 7.3:-29638497 None:intergenic
GGTTCTTTATCATAAATGGT+CGG 0.570849 7.3:-29640495 None:intergenic
CTCAACTGACTATTCCTCCT+CGG 0.571473 7.3:-29635922 None:intergenic
ATGCTTTCAGGCCACCTCAC+CGG 0.571571 7.3:-29636036 None:intergenic
TGAGAGTTAGAGCTTCCATA+AGG 0.571739 7.3:-29640559 None:intergenic
GTGATTCAATGCTGGCCACA+TGG 0.572073 7.3:-29639715 None:intergenic
GGACATGAATGCATTATATG+GGG 0.573009 7.3:+29639067 MS.gene42227:CDS
GTGGATAGATTACTTCGCCC+TGG 0.574350 7.3:+29638457 MS.gene42227:CDS
ACCGGAACCCGATACCCATT+AGG 0.575177 7.3:-29636018 None:intergenic
GGAAACATCGTACCACCACC+GGG 0.575600 7.3:-29637927 None:intergenic
ACCCGATACCCATTAGGCGG+TGG 0.581597 7.3:-29636012 None:intergenic
CCTTAAAATCTGATCCTGTG+TGG 0.585740 7.3:+29639102 MS.gene42227:CDS
ATGGTCAGATCTCCAGGCTG+TGG 0.585744 7.3:+29638534 MS.gene42227:CDS
GAGAGGGGACCTCGAAGGTG+CGG 0.587301 7.3:-29638928 None:intergenic
TCAAAGATCGCATCAAGAGT+TGG 0.587538 7.3:-29639155 None:intergenic
TGTTGTGGATCAACGGTGGA+CGG 0.588409 7.3:-29635799 None:intergenic
CGCAAATTTCTCATGCGGTG+AGG 0.590529 7.3:+29640466 MS.gene42227:CDS
TGCACTTGACATGGGATGTG+GGG 0.590574 7.3:+29638019 MS.gene42227:CDS
GGCTTGTCCTGCAAGTGAGG+TGG 0.591375 7.3:+29635879 MS.gene42227:CDS
GTGGCCTGAAAGCATGCATA+AGG 0.591970 7.3:+29636044 MS.gene42227:CDS
CGGTGGACGGAGCCAGCACA+CGG 0.592440 7.3:-29635786 None:intergenic
CTGACACTAAGCTGTGGGTA+CGG 0.592971 7.3:+29638979 MS.gene42227:CDS
AGTAGTACGTCGTCTATCAA+AGG 0.594144 7.3:+29638858 MS.gene42227:CDS
CTTAAAATCTGATCCTGTGT+GGG 0.595912 7.3:+29639103 MS.gene42227:CDS
CACACGGCGGCGACCAAGGG+TGG 0.596889 7.3:-29635770 None:intergenic
TTCCTCCTCGGATCCTCACA+CGG 0.597488 7.3:-29635910 None:intergenic
AAATTTCTCATGCGGTGAGG+TGG 0.600512 7.3:+29640469 MS.gene42227:CDS
ACAACAGCGCAACCGTCTTG+TGG 0.602780 7.3:+29635816 MS.gene42227:CDS
ATGGGTATCGGGTTCCGGTG+AGG 0.605394 7.3:+29636022 MS.gene42227:CDS
CTGAGGACTGCACTTGACAT+GGG 0.607454 7.3:+29638011 MS.gene42227:CDS
CCATAAATGGAGGTGTTCTG+AGG 0.608336 7.3:+29637994 MS.gene42227:CDS
GTTGCGCTGTTGTGGATCAA+CGG 0.608776 7.3:-29635806 None:intergenic
TTCAGGAGAGGGGACCTCGA+AGG 0.611046 7.3:-29638933 None:intergenic
ATATGCCGTGTGAGGATCCG+AGG 0.611947 7.3:+29635905 MS.gene42227:CDS
AACAAGATTGCTGACAGGAA+AGG 0.612391 7.3:+29637861 MS.gene42227:CDS
TGAGGCTTGTCCTGCAAGTG+AGG 0.612584 7.3:+29635876 MS.gene42227:CDS
CCCACAACAAGATTGCTGAC+AGG 0.621138 7.3:+29637856 MS.gene42227:CDS
GGTGGTACGATGTTTCCAGA+TGG 0.623372 7.3:+29637933 MS.gene42227:CDS
GGATCAGATCATAAGTTCGA+GGG 0.623475 7.3:-29639694 None:intergenic
TGGATCAGATCATAAGTTCG+AGG 0.626818 7.3:-29639695 None:intergenic
GAGACATTGTCCTTTGCCGG+AGG 0.627674 7.3:+29635969 MS.gene42227:CDS
GACATGAATGCATTATATGG+GGG 0.628349 7.3:+29639068 MS.gene42227:CDS
ATGAGGCTGACACTAAGCTG+TGG 0.628841 7.3:+29638973 MS.gene42227:CDS
TGAATTATGTGATGATTCTG+GGG 0.629160 7.3:+29638660 MS.gene42227:CDS
GAGATGACTAGATATCCACC+AGG 0.630917 7.3:-29638475 None:intergenic
CAATTCCCAAGTGGCCAGAG+AGG 0.633346 7.3:+29638898 MS.gene42227:CDS
ATTCACTAAATATAAAGTTG+GGG 0.633734 7.3:+29639021 MS.gene42227:CDS
GTGTTGGTGCGTTTCCATGG+TGG 0.634028 7.3:-29635670 None:intergenic
TGTTTAGCCCACCGAACAGG+AGG 0.634614 7.3:-29638502 None:intergenic
AAGATCGCATCAAGAGTTGG+TGG 0.642391 7.3:-29639152 None:intergenic
ACACTAAGCTGTGGGTACGG+AGG 0.649184 7.3:+29638982 MS.gene42227:CDS
GATAAAGAACCTGACTCACA+CGG 0.649646 7.3:+29640507 MS.gene42227:CDS
CAGGGGTGGATGAAACGAGA+AGG 0.650186 7.3:+29637888 MS.gene42227:CDS
ATCTCTTGGAGCAAATGACA+TGG 0.650880 7.3:-29638180 None:intergenic
TGAGGCTGACACTAAGCTGT+GGG 0.651463 7.3:+29638974 MS.gene42227:CDS
ACTACATTCATCACCCACAC+AGG 0.651770 7.3:-29639116 None:intergenic
CAATACATTCCCATAAATGG+AGG 0.655075 7.3:+29637984 MS.gene42227:CDS
GAGACGCCATTGACGTGTGT+TGG 0.655246 7.3:-29635686 None:intergenic
CTTACCACAACAGTTCCCTC+CGG 0.657553 7.3:-29640414 None:intergenic
ACAGCGCAACCGTCTTGTGG+TGG 0.669047 7.3:+29635819 MS.gene42227:CDS
GATAGATTACTTCGCCCTGG+TGG 0.672552 7.3:+29638460 MS.gene42227:CDS
CCTCAATAGCCACCACAAGA+CGG 0.672916 7.3:-29635828 None:intergenic
AGTAGCGCAAATTTCTCATG+CGG 0.677243 7.3:+29640461 MS.gene42227:CDS
AGTTATCTGTTCATAACACA+AGG 0.678842 7.3:-29638563 None:intergenic
TTGTGGTGGCTATTGAGGAA+GGG 0.680797 7.3:+29635833 MS.gene42227:CDS
AACTTATGATCTGATCCATG+TGG 0.684133 7.3:+29639700 MS.gene42227:CDS
GTCACTCAAATTTCCCACCA+TGG 0.691297 7.3:+29635656 MS.gene42227:CDS
GGTGGATCATATGCCGTGTG+AGG 0.693101 7.3:+29635897 MS.gene42227:CDS
TGCCGTGTGAGGATCCGAGG+AGG 0.694563 7.3:+29635908 MS.gene42227:CDS
AGCCTCATATACATCAACAC+CGG 0.699420 7.3:-29638958 None:intergenic
GCTGACAGGAAAGGTCACCA+GGG 0.706997 7.3:+29637870 MS.gene42227:CDS
CTGACAGGAAAGGTCACCAG+GGG 0.710989 7.3:+29637871 MS.gene42227:CDS
GGAACCCGATACCCATTAGG+CGG 0.712447 7.3:-29636015 None:intergenic
GCGCTGTTGTGGATCAACGG+TGG 0.717072 7.3:-29635803 None:intergenic
CAACACTTTATATTCCCCGG+TGG 0.727815 7.3:+29637912 MS.gene42227:CDS
CTATTGGAACAATTCCCAAG+TGG 0.728324 7.3:+29638889 MS.gene42227:CDS
AGATGACTAGATATCCACCA+GGG 0.765962 7.3:-29638474 None:intergenic
GAAACATCGTACCACCACCG+GGG 0.777476 7.3:-29637926 None:intergenic
TGGACGGAGCCAGCACACGG+CGG 0.777606 7.3:-29635783 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG - chr7.3:29639428-29639447 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTTT+TGG + chr7.3:29639428-29639447 MS.gene42227:intron 0.0%
!! ATTTGATATTAAATTGATAA+TGG + chr7.3:29636863-29636882 MS.gene42227:intron 10.0%
!! CTTTATAAATGTAAAAAATA+TGG + chr7.3:29640125-29640144 MS.gene42227:intron 10.0%
!!! ATTTTTTTTTTGTTTAGAAT+GGG + chr7.3:29637281-29637300 MS.gene42227:intron 10.0%
!!! TTGTATTTTAATTTTTAATC+TGG + chr7.3:29639530-29639549 MS.gene42227:intron 10.0%
!! AAATTAGTAGTATTAATTAG+GGG + chr7.3:29637496-29637515 MS.gene42227:intron 15.0%
!! AATTCACTAAATATAAAGTT+GGG + chr7.3:29639020-29639039 MS.gene42227:CDS 15.0%
!! ACAAATTAGTAGTATTAATT+AGG + chr7.3:29637494-29637513 MS.gene42227:intron 15.0%
!! CAAATTAGTAGTATTAATTA+GGG + chr7.3:29637495-29637514 MS.gene42227:intron 15.0%
!!! GATTTTTTTTTTGTTTAGAA+TGG + chr7.3:29637280-29637299 MS.gene42227:intron 15.0%
!!! TGATTTTAAAATAAGATATG+TGG + chr7.3:29639336-29639355 MS.gene42227:intron 15.0%
!! AAACTATAAGAGAAACTATT+AGG + chr7.3:29636643-29636662 MS.gene42227:intron 20.0%
!! AAATTTAAAAACTGTTGTGT+AGG + chr7.3:29636788-29636807 MS.gene42227:intron 20.0%
!! AATTTAAAAACTGTTGTGTA+GGG + chr7.3:29636789-29636808 MS.gene42227:intron 20.0%
!! ATAAGGTTTAAAAAGTAAAG+AGG - chr7.3:29638058-29638077 None:intergenic 20.0%
!! ATTCACTAAATATAAAGTTG+GGG + chr7.3:29639021-29639040 MS.gene42227:CDS 20.0%
!! GAAAATACCTCTAAATTTAA+AGG - chr7.3:29637019-29637038 None:intergenic 20.0%
!! GAATTCACTAAATATAAAGT+TGG + chr7.3:29639019-29639038 MS.gene42227:CDS 20.0%
!! GGACAAAAATAAAATCAAAT+GGG + chr7.3:29637578-29637597 MS.gene42227:intron 20.0%
!! TGAAATTCTACAATATTTCT+TGG + chr7.3:29639998-29640017 MS.gene42227:intron 20.0%
!! TTTATTACACATACAAACAA+AGG - chr7.3:29637453-29637472 None:intergenic 20.0%
!!! AATGAAAATTTTAATCTCCA+TGG - chr7.3:29636846-29636865 None:intergenic 20.0%
!!! ATGTAATATTGTTGATTTGA+TGG + chr7.3:29640368-29640387 MS.gene42227:CDS 20.0%
!!! ATTATTTTCCAGAAACATTA+GGG + chr7.3:29639249-29639268 MS.gene42227:intron 20.0%
!!! TTAGTAGAGTTTTTCAATTT+AGG - chr7.3:29639905-29639924 None:intergenic 20.0%
!!! TTTAATTTTTAATCTGGATG+CGG + chr7.3:29639536-29639555 MS.gene42227:intron 20.0%
!!! TTTTAAAATAAGATATGTGG+TGG + chr7.3:29639339-29639358 MS.gene42227:intron 20.0%
! AAACATCAATGATTAAAGCA+AGG - chr7.3:29640310-29640329 None:intergenic 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG - chr7.3:29637371-29637390 None:intergenic 25.0%
! AATACCATTCTCAAAACATA+AGG + chr7.3:29636910-29636929 MS.gene42227:intron 25.0%
! AATCGATTATATAACAGCTT+AGG - chr7.3:29639819-29639838 None:intergenic 25.0%
! AATGAAATTGTGAAGAAATC+AGG - chr7.3:29640344-29640363 None:intergenic 25.0%
! ACAAGTACCTTTAAATTTAG+AGG + chr7.3:29637009-29637028 MS.gene42227:intron 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG - chr7.3:29637370-29637389 None:intergenic 25.0%
! AGAAATTACAACATTAGAGA+GGG + chr7.3:29636471-29636490 MS.gene42227:intron 25.0%
! AGATTTAGAGATTAATGAGT+TGG + chr7.3:29636668-29636687 MS.gene42227:intron 25.0%
! ATATATATCATGTGAATGTG+TGG + chr7.3:29639463-29639482 MS.gene42227:intron 25.0%
! ATTTAAAAACTGTTGTGTAG+GGG + chr7.3:29636790-29636809 MS.gene42227:intron 25.0%
! CATTTCTTAAGAAAAGTTGT+CGG + chr7.3:29637383-29637402 MS.gene42227:intron 25.0%
! CTACAAATTGAATCCTAATT+TGG - chr7.3:29637673-29637692 None:intergenic 25.0%
! GAAATTAATATAGAGGTGAT+AGG + chr7.3:29637699-29637718 MS.gene42227:intron 25.0%
! GGGACAAAAATAAAATCAAA+TGG + chr7.3:29637577-29637596 MS.gene42227:intron 25.0%
! GTGCAATGAAATTAATATAG+AGG + chr7.3:29637692-29637711 MS.gene42227:intron 25.0%
! TAACCAATTATAAAATGCCA+TGG + chr7.3:29636826-29636845 MS.gene42227:intron 25.0%
! TAGAAATTACAACATTAGAG+AGG + chr7.3:29636470-29636489 MS.gene42227:intron 25.0%
! TAGAGAGATGAATTACTATA+GGG + chr7.3:29635945-29635964 MS.gene42227:CDS 25.0%
! TATATCCATTTGTATCGTAA+TGG + chr7.3:29639607-29639626 MS.gene42227:intron 25.0%
! TGAAAAGGAGTTTACATTTA+GGG + chr7.3:29637557-29637576 MS.gene42227:intron 25.0%
! TGAAGTAAAATGGAGTAAAA+TGG - chr7.3:29638116-29638135 None:intergenic 25.0%
! TTGAAAAGGAGTTTACATTT+AGG + chr7.3:29637556-29637575 MS.gene42227:intron 25.0%
! TTGAATTATGTGATGATTCT+GGG + chr7.3:29638659-29638678 MS.gene42227:CDS 25.0%
! TTTGCCAAGTATTAAGATAT+AGG - chr7.3:29639289-29639308 None:intergenic 25.0%
!! ATTTTACTCCATTTTACTTC+AGG + chr7.3:29638115-29638134 MS.gene42227:intron 25.0%
!! CATAGTAAATTTTCTGCATA+AGG - chr7.3:29638414-29638433 None:intergenic 25.0%
!! GATTATTTTCCAGAAACATT+AGG + chr7.3:29639248-29639267 MS.gene42227:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr7.3:29636639-29636658 None:intergenic 25.0%
!! TAATATGTTTTGTGCAGATA+TGG + chr7.3:29637820-29637839 MS.gene42227:intron 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr7.3:29637506-29637525 MS.gene42227:intron 25.0%
!! TTGTCTTATTGTTGCTATTA+TGG + chr7.3:29637183-29637202 MS.gene42227:intron 25.0%
!! TTTTATAAGTGATTCAATGC+TGG - chr7.3:29639726-29639745 None:intergenic 25.0%
!!! ATGCATCTAGTATTTTGAAA+AGG + chr7.3:29637542-29637561 MS.gene42227:intron 25.0%
!!! ATTTTAAAATCATGTCTGCA+AGG - chr7.3:29639328-29639347 None:intergenic 25.0%
!!! TAAATTTAGAGGTATTTTCC+AGG + chr7.3:29637020-29637039 MS.gene42227:intron 25.0%
!!! TAATATTGTTGATTTGATGG+TGG + chr7.3:29640371-29640390 MS.gene42227:CDS 25.0%
AAAATAGACTTAGGTGGTTT+GGG + chr7.3:29636529-29636548 MS.gene42227:intron 30.0%
AAATGTGAAAAAAGCAAAGG+GGG - chr7.3:29637368-29637387 None:intergenic 30.0%
AAATTTACCAAGCTTGACTT+AGG - chr7.3:29638687-29638706 None:intergenic 30.0%
AGAGATGCAAAGATAATCAA+AGG - chr7.3:29638710-29638729 None:intergenic 30.0%
AGTCAATACATTCCCATAAA+TGG + chr7.3:29637981-29638000 MS.gene42227:CDS 30.0%
AGTTATCTGTTCATAACACA+AGG - chr7.3:29638566-29638585 None:intergenic 30.0%
ATAAGATTGATCTTCAATCC+TGG - chr7.3:29637041-29637060 None:intergenic 30.0%
ATCAAAGGAGATTATGCTAT+TGG + chr7.3:29638873-29638892 MS.gene42227:CDS 30.0%
ATGGACATGAATGCATTATA+TGG + chr7.3:29639065-29639084 MS.gene42227:CDS 30.0%
ATGGCCTATATCTTAATACT+TGG + chr7.3:29639282-29639301 MS.gene42227:intron 30.0%
CAAATGGGTGTTTAGATATA+GGG + chr7.3:29637593-29637612 MS.gene42227:intron 30.0%
CAAATTGTCGAGATCTATAA+AGG - chr7.3:29639874-29639893 None:intergenic 30.0%
CAGTGATCAATTCTAGTATA+AGG - chr7.3:29638075-29638094 None:intergenic 30.0%
CTTGAATTATGTGATGATTC+TGG + chr7.3:29638658-29638677 MS.gene42227:CDS 30.0%
GAAATGTGAAAAAAGCAAAG+GGG - chr7.3:29637369-29637388 None:intergenic 30.0%
GAGAAAGAGTAATGAGAAAA+AGG - chr7.3:29635731-29635750 None:intergenic 30.0%
GGTTCTTTATCATAAATGGT+CGG - chr7.3:29640498-29640517 None:intergenic 30.0%
GTAGAGAGATGAATTACTAT+AGG + chr7.3:29635944-29635963 MS.gene42227:CDS 30.0%
GTCAGGTTCTTTATCATAAA+TGG - chr7.3:29640502-29640521 None:intergenic 30.0%
TACATCCATTACGATACAAA+TGG - chr7.3:29639615-29639634 None:intergenic 30.0%
TATGTTGCAGACTTCATATA+TGG + chr7.3:29637144-29637163 MS.gene42227:intron 30.0%
TCAAATGGGTGTTTAGATAT+AGG + chr7.3:29637592-29637611 MS.gene42227:intron 30.0%
TGAATTATGTGATGATTCTG+GGG + chr7.3:29638660-29638679 MS.gene42227:CDS 30.0%
TGCAACTTATTTCATTGAAG+TGG + chr7.3:29638438-29638457 MS.gene42227:CDS 30.0%
TGGACATGAATGCATTATAT+GGG + chr7.3:29639066-29639085 MS.gene42227:CDS 30.0%
TTCATGCATCTTCTCTTAAA+GGG + chr7.3:29639226-29639245 MS.gene42227:intron 30.0%
TTTGACATGAATCTAATAGG+AGG - chr7.3:29640237-29640256 None:intergenic 30.0%
! AACTAAGATGATCATTTTGC+AGG + chr7.3:29638811-29638830 MS.gene42227:intron 30.0%
! AGTTGCTTTCATGATACTTA+CGG + chr7.3:29639398-29639417 MS.gene42227:intron 30.0%
! CTTCACTGTTTATTTGAGAT+CGG + chr7.3:29636347-29636366 MS.gene42227:intron 30.0%
! TAAAATTTGCTTTAGCCTAG+AGG - chr7.3:29640279-29640298 None:intergenic 30.0%
! TATTGTTGCTATTATGGTTG+TGG + chr7.3:29637189-29637208 MS.gene42227:intron 30.0%
! TCTCCATGGCATTTTATAAT+TGG - chr7.3:29636832-29636851 None:intergenic 30.0%
! TGGAAATTGATCGAATTTTG+CGG + chr7.3:29640391-29640410 MS.gene42227:CDS 30.0%
! TTACCTGCATCAATTGTTTT+CGG + chr7.3:29636265-29636284 MS.gene42227:intron 30.0%
! TTATTGGTGTCTATCATGAT+TGG + chr7.3:29639186-29639205 MS.gene42227:CDS 30.0%
!! TATGGTTTACTTTTGCTATG+AGG + chr7.3:29640143-29640162 MS.gene42227:intron 30.0%
!! TATGTTTGGGTTGTATTTAC+TGG + chr7.3:29637313-29637332 MS.gene42227:intron 30.0%
!!! GTATCCTTATGTTTTGAGAA+TGG - chr7.3:29636917-29636936 None:intergenic 30.0%
!!! TCGTAATGGATGTATTTTCT+TGG + chr7.3:29639621-29639640 MS.gene42227:intron 30.0%
AACTTACTGTAGGCTGTAAA+CGG - chr7.3:29638335-29638354 None:intergenic 35.0%
AACTTATGATCTGATCCATG+TGG + chr7.3:29639700-29639719 MS.gene42227:CDS 35.0%
AATGTGAAAAAAGCAAAGGG+GGG - chr7.3:29637367-29637386 None:intergenic 35.0%
ACATTAGGGTTGTGATCTTA+TGG + chr7.3:29639263-29639282 MS.gene42227:intron 35.0%
ACTAGCAACCTGAAGTAAAA+TGG - chr7.3:29638126-29638145 None:intergenic 35.0%
AGAAAAAGGCAATGGAAATG+AGG - chr7.3:29635717-29635736 None:intergenic 35.0%
AGACCAAACTCATTTCCATT+AGG - chr7.3:29638640-29638659 None:intergenic 35.0%
AGTGTGATGAAATTGAGATG+AGG + chr7.3:29637634-29637653 MS.gene42227:intron 35.0%
ATACAATTTGCCTTGGAAAG+AGG + chr7.3:29638218-29638237 MS.gene42227:CDS 35.0%
ATATATTGTTCTGCTCCATC+TGG - chr7.3:29637951-29637970 None:intergenic 35.0%
ATCATGTCTGCAAGGAAAAA+TGG - chr7.3:29639320-29639339 None:intergenic 35.0%
ATCCAGCTACTGGTAAAAAA+AGG + chr7.3:29639747-29639766 MS.gene42227:CDS 35.0%
ATCTTTGACAGAGGACTTAT+TGG + chr7.3:29639170-29639189 MS.gene42227:CDS 35.0%
ATGGCAAGAGAGACATTAAT+CGG + chr7.3:29637730-29637749 MS.gene42227:intron 35.0%
ATTGAGGAAGGGATGTTAAA+TGG + chr7.3:29635844-29635863 MS.gene42227:CDS 35.0%
ATTTCTAATTCCCTCCCAAA+TGG - chr7.3:29636457-29636476 None:intergenic 35.0%
CAATACATTCCCATAAATGG+AGG + chr7.3:29637984-29638003 MS.gene42227:CDS 35.0%
CGGTTTGACATGAATCTAAT+AGG - chr7.3:29640240-29640259 None:intergenic 35.0%
CTTAAAATCTGATCCTGTGT+GGG + chr7.3:29639103-29639122 MS.gene42227:CDS 35.0%
CTTATAAAAGATCCAGCTAC+TGG + chr7.3:29639737-29639756 MS.gene42227:CDS 35.0%
CTTCCTAATGGAAATGAGTT+TGG + chr7.3:29638634-29638653 MS.gene42227:CDS 35.0%
GAAAATAGACTTAGGTGGTT+TGG + chr7.3:29636528-29636547 MS.gene42227:intron 35.0%
GACATGAATGCATTATATGG+GGG + chr7.3:29639068-29639087 MS.gene42227:CDS 35.0%
GAGTAATGAGAAAAAGGCAA+TGG - chr7.3:29635725-29635744 None:intergenic 35.0%
GATGTATGGTAAGACCATTT+GGG + chr7.3:29636440-29636459 MS.gene42227:intron 35.0%
GGACATGAATGCATTATATG+GGG + chr7.3:29639067-29639086 MS.gene42227:CDS 35.0%
GGAGAATAAAGTAAGTGTAG+CGG + chr7.3:29636401-29636420 MS.gene42227:intron 35.0%
GTTCATGCATCTTCTCTTAA+AGG + chr7.3:29639225-29639244 MS.gene42227:intron 35.0%
TAATCTGATGTCACATCTCT+AGG + chr7.3:29639790-29639809 MS.gene42227:intron 35.0%
TACATGAAAACACTGCAATC+TGG + chr7.3:29638587-29638606 MS.gene42227:CDS 35.0%
TCAAATCCAAAAGCAGGAAA+TGG - chr7.3:29638284-29638303 None:intergenic 35.0%
TGAGAATGTGAAGCCAAATT+AGG + chr7.3:29637657-29637676 MS.gene42227:intron 35.0%
TGCGATTTATGTGAATCTCT+TGG - chr7.3:29638197-29638216 None:intergenic 35.0%
TGGTAGACATGATGCATTAT+TGG + chr7.3:29637103-29637122 MS.gene42227:intron 35.0%
TTACCGAAAACAATTGATGC+AGG - chr7.3:29636271-29636290 None:intergenic 35.0%
TTGAGGAAGGGATGTTAAAT+GGG + chr7.3:29635845-29635864 MS.gene42227:CDS 35.0%
! ATTGTGAAGAAATCAGGTTG+AGG - chr7.3:29640338-29640357 None:intergenic 35.0%
! CATGTACTTAAAAGCGTGTT+TGG + chr7.3:29636159-29636178 MS.gene42227:intron 35.0%
! CGCTACTTTGTCAATTACTT+CGG - chr7.3:29640448-29640467 None:intergenic 35.0%
! CTTGTTATGTGTAACTTGGA+GGG + chr7.3:29637215-29637234 MS.gene42227:intron 35.0%
! GCAAGGTATTTGATGTTCAA+TGG + chr7.3:29640208-29640227 MS.gene42227:intron 35.0%
! GCTACTTTGTCAATTACTTC+GGG - chr7.3:29640447-29640466 None:intergenic 35.0%
! GGAGTTATTGTGTTTTGTGA+AGG + chr7.3:29637236-29637255 MS.gene42227:intron 35.0%
! TAATGAGTTGGATGCAAATG+TGG + chr7.3:29636680-29636699 MS.gene42227:intron 35.0%
! TTGTGTTTTGTGAAGGACTT+AGG + chr7.3:29637243-29637262 MS.gene42227:intron 35.0%
! TTTTTAATCTGGATGCGGTT+CGG + chr7.3:29639541-29639560 MS.gene42227:intron 35.0%
!! ACGTGTGGTTTTTCAAATCA+AGG - chr7.3:29636245-29636264 None:intergenic 35.0%
!! AGATGGTGGAAAATAGACTT+AGG + chr7.3:29636520-29636539 MS.gene42227:intron 35.0%
!! CGTGTGGTTTTTCAAATCAA+GGG - chr7.3:29636244-29636263 None:intergenic 35.0%
!! GTTAAATGGGAAGAGTATTG+AGG + chr7.3:29635858-29635877 MS.gene42227:CDS 35.0%
!! TCAATAAAGTGTTGCAGTAG+CGG + chr7.3:29636380-29636399 MS.gene42227:intron 35.0%
!! TTGACTTGGTTCATTGTTCT+CGG + chr7.3:29638300-29638319 MS.gene42227:CDS 35.0%
!!! GGTGTAGTTTTTTGGAAAGT+TGG + chr7.3:29636070-29636089 MS.gene42227:intron 35.0%
!!! TAAGGTGTGGTGTAGTTTTT+TGG + chr7.3:29636062-29636081 MS.gene42227:intron 35.0%
!!! TACCTTTTTTTACCAGTAGC+TGG - chr7.3:29639752-29639771 None:intergenic 35.0%
!!! TAGTTTTGACCAAGACCTTA+TGG + chr7.3:29640544-29640563 MS.gene42227:CDS 35.0%
!!! TTACTTCAGGTTGCTAGTTT+TGG + chr7.3:29638128-29638147 MS.gene42227:intron 35.0%
AAAAGAATGGTCAGATCTCC+AGG + chr7.3:29638528-29638547 MS.gene42227:CDS 40.0%
AACAAGATTGCTGACAGGAA+AGG + chr7.3:29637861-29637880 MS.gene42227:CDS 40.0%
AATTGATGCAGGTAAACGTG+TGG - chr7.3:29636260-29636279 None:intergenic 40.0%
ACCAAGTCAAATCCAAAAGC+AGG - chr7.3:29638290-29638309 None:intergenic 40.0%
ACCTTGAGTAGAAAAGATGG+TGG + chr7.3:29636506-29636525 MS.gene42227:intron 40.0%
AGATGACTAGATATCCACCA+GGG - chr7.3:29638477-29638496 None:intergenic 40.0%
AGCACCTTGAGTAGAAAAGA+TGG + chr7.3:29636503-29636522 MS.gene42227:intron 40.0%
AGCCTCATATACATCAACAC+CGG - chr7.3:29638961-29638980 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + chr7.3:29636581-29636600 MS.gene42227:intron 40.0%
AGTAGCGCAAATTTCTCATG+CGG + chr7.3:29640461-29640480 MS.gene42227:CDS 40.0%
AGTAGTACGTCGTCTATCAA+AGG + chr7.3:29638858-29638877 MS.gene42227:CDS 40.0%
AGTCAAATCACTAGAGGTAG+AGG + chr7.3:29636609-29636628 MS.gene42227:intron 40.0%
ATATAGAGGTGATAGGCTGA+TGG + chr7.3:29637706-29637725 MS.gene42227:intron 40.0%
ATCGCAGATACAATTTGCCT+TGG + chr7.3:29638211-29638230 MS.gene42227:CDS 40.0%
ATCTCTTGGAGCAAATGACA+TGG - chr7.3:29638183-29638202 None:intergenic 40.0%
ATGATGTTGCCTTGGATGTA+TGG + chr7.3:29636426-29636445 MS.gene42227:intron 40.0%
ATGGGATAGTGCTGTATGTT+TGG + chr7.3:29637299-29637318 MS.gene42227:intron 40.0%
ATGTTTCAAAGAAGCAGCAC+AGG - chr7.3:29640032-29640051 None:intergenic 40.0%
CATGATGCATTATTGGACAC+TGG + chr7.3:29637110-29637129 MS.gene42227:intron 40.0%
CCTCCAAGTTACACATAACA+AGG - chr7.3:29637217-29637236 None:intergenic 40.0%
CCTTAAAATCTGATCCTGTG+TGG + chr7.3:29639102-29639121 MS.gene42227:CDS 40.0%
CGGCTACATGGATCAAATTA+CGG - chr7.3:29636725-29636744 None:intergenic 40.0%
CTATTGGAACAATTCCCAAG+TGG + chr7.3:29638889-29638908 MS.gene42227:CDS 40.0%
CTCAGAACACCTCCATTTAT+GGG - chr7.3:29637996-29638015 None:intergenic 40.0%
CTCCTTACTACACAATCTAC+AGG - chr7.3:29636570-29636589 None:intergenic 40.0%
GACCTGTAGATTGTGTAGTA+AGG + chr7.3:29636565-29636584 MS.gene42227:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG + chr7.3:29636603-29636622 MS.gene42227:intron 40.0%
GATAAAGAACCTGACTCACA+CGG + chr7.3:29640507-29640526 MS.gene42227:CDS 40.0%
GATCACAACCCTAATGTTTC+TGG - chr7.3:29639260-29639279 None:intergenic 40.0%
GGATCAGATCATAAGTTCGA+GGG - chr7.3:29639697-29639716 None:intergenic 40.0%
GGATGTATGGTAAGACCATT+TGG + chr7.3:29636439-29636458 MS.gene42227:intron 40.0%
GGGCTAAACAGGAAAAAGAA+TGG + chr7.3:29638515-29638534 MS.gene42227:CDS 40.0%
GGTCAACACTTTATATTCCC+CGG + chr7.3:29637909-29637928 MS.gene42227:CDS 40.0%
GTAGAGTTTGAATCAGTGCA+AGG + chr7.3:29640191-29640210 MS.gene42227:intron 40.0%
GTTGAAAAAGGTTCACACCT+GGG - chr7.3:29639671-29639690 None:intergenic 40.0%
TACAACATTAGAGAGGGAGT+TGG + chr7.3:29636477-29636496 MS.gene42227:intron 40.0%
TATGGTAAGACCATTTGGGA+GGG + chr7.3:29636444-29636463 MS.gene42227:intron 40.0%
TCAAAGATCGCATCAAGAGT+TGG - chr7.3:29639158-29639177 None:intergenic 40.0%
TCCATAACGTTGCGTATTGA+TGG - chr7.3:29639050-29639069 None:intergenic 40.0%
TCCATCAATACGCAACGTTA+TGG + chr7.3:29639046-29639065 MS.gene42227:CDS 40.0%
TGAGGGCAAGTTAGTGAAAA+TGG + chr7.3:29637083-29637102 MS.gene42227:intron 40.0%
TGCAATGCAGAACTTACTGT+AGG - chr7.3:29638345-29638364 None:intergenic 40.0%
TGGATCAGATCATAAGTTCG+AGG - chr7.3:29639698-29639717 None:intergenic 40.0%
TGGGATAGTGCTGTATGTTT+GGG + chr7.3:29637300-29637319 MS.gene42227:intron 40.0%
TGGGTGTTTAGATATAGGGA+CGG + chr7.3:29637597-29637616 MS.gene42227:intron 40.0%
TGGTGGAAAATAGACTTAGG+TGG + chr7.3:29636523-29636542 MS.gene42227:intron 40.0%
TGTTGAAAAAGGTTCACACC+TGG - chr7.3:29639672-29639691 None:intergenic 40.0%
TGTTTAGATATAGGGACGGA+GGG + chr7.3:29637601-29637620 MS.gene42227:intron 40.0%
TTAGAGCTTCCATAAGGTCT+TGG - chr7.3:29640556-29640575 None:intergenic 40.0%
! AATTGATCGAATTTTGCGGC+CGG + chr7.3:29640395-29640414 MS.gene42227:CDS 40.0%
! AGACTTCCATTTCCTGCTTT+TGG + chr7.3:29638275-29638294 MS.gene42227:CDS 40.0%
! ATGGTCTTACCATACATCCA+AGG - chr7.3:29636438-29636457 None:intergenic 40.0%
! CCACACAGGATCAGATTTTA+AGG - chr7.3:29639105-29639124 None:intergenic 40.0%
! CCTTGTTATGTGTAACTTGG+AGG + chr7.3:29637214-29637233 MS.gene42227:intron 40.0%
! GTGCCTTGTTATGTGTAACT+TGG + chr7.3:29637211-29637230 MS.gene42227:intron 40.0%
! GTTCGAGGGTATGTTGAAAA+AGG - chr7.3:29639683-29639702 None:intergenic 40.0%
! TCCACCATCTTTTCTACTCA+AGG - chr7.3:29636510-29636529 None:intergenic 40.0%
!! AACCGGTGTTGATGTATATG+AGG + chr7.3:29638956-29638975 MS.gene42227:CDS 40.0%
!! TCCTGCTTTTGGATTTGACT+TGG + chr7.3:29638286-29638305 MS.gene42227:CDS 40.0%
!!! AAGTTGTAGGTTTTGTTCCC+AGG + chr7.3:29639651-29639670 MS.gene42227:intron 40.0%
!!! ATACATCAACACCGGTTTTC+AGG - chr7.3:29638953-29638972 None:intergenic 40.0%
!!! GACTTAGGAGCTTGTTTTTG+TGG + chr7.3:29637258-29637277 MS.gene42227:intron 40.0%
AAATTTCTCATGCGGTGAGG+TGG + chr7.3:29640469-29640488 MS.gene42227:CDS 45.0%
AACTTACAGCAACAGCCTCT+AGG + chr7.3:29640261-29640280 MS.gene42227:intron 45.0%
AAGATCGCATCAAGAGTTGG+TGG - chr7.3:29639155-29639174 None:intergenic 45.0%
AAGGAGAGTAGATCAGATGG+AGG + chr7.3:29636584-29636603 MS.gene42227:intron 45.0%
ACTACATTCATCACCCACAC+AGG - chr7.3:29639119-29639138 None:intergenic 45.0%
ACTGAGAAGCTACTGCAATG+AGG + chr7.3:29637065-29637084 MS.gene42227:intron 45.0%
AGCAAAGGGGGGTTACATTA+AGG - chr7.3:29637356-29637375 None:intergenic 45.0%
ATATGATCCACCTCACTTGC+AGG - chr7.3:29635889-29635908 None:intergenic 45.0%
CAACACTTTATATTCCCCGG+TGG + chr7.3:29637912-29637931 MS.gene42227:CDS 45.0%
CACACCTTATGCATGCTTTC+AGG - chr7.3:29636051-29636070 None:intergenic 45.0%
CCAAGCATAGCAACAAAAGC+CGG - chr7.3:29638248-29638267 None:intergenic 45.0%
CCTCAGAACACCTCCATTTA+TGG - chr7.3:29637997-29638016 None:intergenic 45.0%
CTCAACTGACTATTCCTCCT+CGG - chr7.3:29635925-29635944 None:intergenic 45.0%
CTGAGAAGCTACTGCAATGA+GGG + chr7.3:29637066-29637085 MS.gene42227:intron 45.0%
CTTATCCCACTAAGTGGAGT+CGG - chr7.3:29636745-29636764 None:intergenic 45.0%
CTTGATGCGATCTTTGACAG+AGG + chr7.3:29639161-29639180 MS.gene42227:CDS 45.0%
GAGATGACTAGATATCCACC+AGG - chr7.3:29638478-29638497 None:intergenic 45.0%
GATGCATTATTGGACACTGG+TGG + chr7.3:29637113-29637132 MS.gene42227:intron 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr7.3:29637355-29637374 None:intergenic 45.0%
GCAGATTCGTGTCTTCCTAA+TGG + chr7.3:29638622-29638641 MS.gene42227:CDS 45.0%
GGTGGATATCTAGTCATCTC+CGG + chr7.3:29638478-29638497 MS.gene42227:CDS 45.0%
GTATGGTAAGACCATTTGGG+AGG + chr7.3:29636443-29636462 MS.gene42227:intron 45.0%
GTCACTCAAATTTCCCACCA+TGG + chr7.3:29635656-29635675 MS.gene42227:CDS 45.0%
GTGTTTAGATATAGGGACGG+AGG + chr7.3:29637600-29637619 MS.gene42227:intron 45.0%
GTTTGATTCCACCGCCTAAT+GGG + chr7.3:29636004-29636023 MS.gene42227:CDS 45.0%
TCCTGTCAGCAATCTTGTTG+TGG - chr7.3:29637860-29637879 None:intergenic 45.0%
TGCCTTGGAAAGAGGAATAC+CGG + chr7.3:29638226-29638245 MS.gene42227:CDS 45.0%
TGTTTGATTCCACCGCCTAA+TGG + chr7.3:29636003-29636022 MS.gene42227:CDS 45.0%
TTGTGGTGGCTATTGAGGAA+GGG + chr7.3:29635833-29635852 MS.gene42227:CDS 45.0%
! CCTGTCAGCAATCTTGTTGT+GGG - chr7.3:29637859-29637878 None:intergenic 45.0%
! CTGAAAGCATGCATAAGGTG+TGG + chr7.3:29636049-29636068 MS.gene42227:intron 45.0%
! CTGTCAGCAATCTTGTTGTG+GGG - chr7.3:29637858-29637877 None:intergenic 45.0%
! GTTCTCTTTTACACCACCCT+TGG + chr7.3:29635757-29635776 MS.gene42227:CDS 45.0%
! TCGGTTGATTCATCTGCTCT+TGG + chr7.3:29637749-29637768 MS.gene42227:intron 45.0%
!! CCATAAATGGAGGTGTTCTG+AGG + chr7.3:29637994-29638013 MS.gene42227:CDS 45.0%
!!! CTTCAGGTTGCTAGTTTTGG+AGG + chr7.3:29638131-29638150 MS.gene42227:intron 45.0%
AAACAAACCGCAGTCTCCTC+CGG - chr7.3:29635988-29636007 None:intergenic 50.0%
AACGCACCAACACACGTCAA+TGG + chr7.3:29635680-29635699 MS.gene42227:CDS 50.0%
ACTAAGTGGAGTCGGCTACA+TGG - chr7.3:29636737-29636756 None:intergenic 50.0%
ACTGCACTTGACATGGGATG+TGG + chr7.3:29638017-29638036 MS.gene42227:CDS 50.0%
AGCCGGTATTCCTCTTTCCA+AGG - chr7.3:29638231-29638250 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - chr7.3:29637351-29637370 None:intergenic 50.0%
ATGAGGCTGACACTAAGCTG+TGG + chr7.3:29638973-29638992 MS.gene42227:CDS 50.0%
CACTTTATATTCCCCGGTGG+TGG + chr7.3:29637915-29637934 MS.gene42227:CDS 50.0%
CATAGTGACACTGACACACG+TGG + chr7.3:29636206-29636225 MS.gene42227:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7.3:29636748-29636767 MS.gene42227:intron 50.0%
CCCACAACAAGATTGCTGAC+AGG + chr7.3:29637856-29637875 MS.gene42227:CDS 50.0%
CCTCAATAGCCACCACAAGA+CGG - chr7.3:29635831-29635850 None:intergenic 50.0%
CGACTCCACTTAGTGGGATA+AGG + chr7.3:29636743-29636762 MS.gene42227:intron 50.0%
CGCAAATTTCTCATGCGGTG+AGG + chr7.3:29640466-29640485 MS.gene42227:CDS 50.0%
CTGACACTAAGCTGTGGGTA+CGG + chr7.3:29638979-29638998 MS.gene42227:CDS 50.0%
CTGAGGACTGCACTTGACAT+GGG + chr7.3:29638011-29638030 MS.gene42227:CDS 50.0%
CTGCACTTGACATGGGATGT+GGG + chr7.3:29638018-29638037 MS.gene42227:CDS 50.0%
CTTACCACAACAGTTCCCTC+CGG - chr7.3:29640417-29640436 None:intergenic 50.0%
CTTGTGGTGGCTATTGAGGA+AGG + chr7.3:29635832-29635851 MS.gene42227:CDS 50.0%
GAGGCTGTTGCTGTAAGTTG+CGG - chr7.3:29640260-29640279 None:intergenic 50.0%
GAGGTGATAGGCTGATGGAA+TGG + chr7.3:29637711-29637730 MS.gene42227:intron 50.0%
GATAGATTACTTCGCCCTGG+TGG + chr7.3:29638460-29638479 MS.gene42227:CDS 50.0%
GGAGAGACATTGTCCTTTGC+CGG + chr7.3:29635966-29635985 MS.gene42227:CDS 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr7.3:29637347-29637366 None:intergenic 50.0%
GGTGGTACGATGTTTCCAGA+TGG + chr7.3:29637933-29637952 MS.gene42227:CDS 50.0%
GTGATTCAATGCTGGCCACA+TGG - chr7.3:29639718-29639737 None:intergenic 50.0%
GTGGATAGATTACTTCGCCC+TGG + chr7.3:29638457-29638476 MS.gene42227:CDS 50.0%
GTTGCGCTGTTGTGGATCAA+CGG - chr7.3:29635809-29635828 None:intergenic 50.0%
TAGCGGAGATGATGTTGCCT+TGG + chr7.3:29636418-29636437 MS.gene42227:intron 50.0%
TCTGAGGACTGCACTTGACA+TGG + chr7.3:29638010-29638029 MS.gene42227:CDS 50.0%
TGAGGCTGACACTAAGCTGT+GGG + chr7.3:29638974-29638993 MS.gene42227:CDS 50.0%
TGCACTTGACATGGGATGTG+GGG + chr7.3:29638019-29638038 MS.gene42227:CDS 50.0%
TGGAAACATCGTACCACCAC+CGG - chr7.3:29637931-29637950 None:intergenic 50.0%
TGTTGGTGCGTTTCCATGGT+GGG - chr7.3:29635672-29635691 None:intergenic 50.0%
TGTTGTGGATCAACGGTGGA+CGG - chr7.3:29635802-29635821 None:intergenic 50.0%
! ATGTAGCCGACTCCACTTAG+TGG + chr7.3:29636736-29636755 MS.gene42227:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7.3:29636751-29636770 None:intergenic 50.0%
! CCGGCTTTTGTTGCTATGCT+TGG + chr7.3:29638245-29638264 MS.gene42227:CDS 50.0%
! GTGGCCTGAAAGCATGCATA+AGG + chr7.3:29636044-29636063 MS.gene42227:CDS 50.0%
! TGTAGCCGACTCCACTTAGT+GGG + chr7.3:29636737-29636756 MS.gene42227:intron 50.0%
! TTCCACCGCCTAATGGGTAT+CGG + chr7.3:29636010-29636029 MS.gene42227:CDS 50.0%
! TTTTCTCTGCCGTGTGAGTC+AGG - chr7.3:29640519-29640538 None:intergenic 50.0%
!!! AACACCGGTTTTCAGGAGAG+GGG - chr7.3:29638946-29638965 None:intergenic 50.0%
!!! AGAGTTGGTGGCTTTTGAGC+TGG - chr7.3:29639143-29639162 None:intergenic 50.0%
!!! CAACACCGGTTTTCAGGAGA+GGG - chr7.3:29638947-29638966 None:intergenic 50.0%
!!! TCAACACCGGTTTTCAGGAG+AGG - chr7.3:29638948-29638967 None:intergenic 50.0%
ACAACAGCGCAACCGTCTTG+TGG + chr7.3:29635816-29635835 MS.gene42227:CDS 55.0%
ACAAGACGGTTGCGCTGTTG+TGG - chr7.3:29635817-29635836 None:intergenic 55.0%
ACACTAAGCTGTGGGTACGG+AGG + chr7.3:29638982-29639001 MS.gene42227:CDS 55.0%
ACCGGAACCCGATACCCATT+AGG - chr7.3:29636021-29636040 None:intergenic 55.0%
AGATCTCCAGGCTGTGGCAA+AGG + chr7.3:29638540-29638559 MS.gene42227:CDS 55.0%
AGGTCCCCTCTCCTGAAAAC+CGG + chr7.3:29638939-29638958 MS.gene42227:CDS 55.0%
ATATGCCGTGTGAGGATCCG+AGG + chr7.3:29635905-29635924 MS.gene42227:CDS 55.0%
ATGCTTTCAGGCCACCTCAC+CGG - chr7.3:29636039-29636058 None:intergenic 55.0%
ATGGTCAGATCTCCAGGCTG+TGG + chr7.3:29638534-29638553 MS.gene42227:CDS 55.0%
CAATTCCCAAGTGGCCAGAG+AGG + chr7.3:29638898-29638917 MS.gene42227:CDS 55.0%
CACTAAGCTGTGGGTACGGA+GGG + chr7.3:29638983-29639002 MS.gene42227:CDS 55.0%
CAGGGGTGGATGAAACGAGA+AGG + chr7.3:29637888-29637907 MS.gene42227:CDS 55.0%
CCGTCTTGTGGTGGCTATTG+AGG + chr7.3:29635828-29635847 MS.gene42227:CDS 55.0%
CTGACAGGAAAGGTCACCAG+GGG + chr7.3:29637871-29637890 MS.gene42227:CDS 55.0%
CTGGGGACCTAAGTCAAGCT+TGG + chr7.3:29638677-29638696 MS.gene42227:CDS 55.0%
CTTCTCGTTTCATCCACCCC+TGG - chr7.3:29637890-29637909 None:intergenic 55.0%
GAAACATCGTACCACCACCG+GGG - chr7.3:29637929-29637948 None:intergenic 55.0%
GAGACATTGTCCTTTGCCGG+AGG + chr7.3:29635969-29635988 MS.gene42227:CDS 55.0%
GAGACGCCATTGACGTGTGT+TGG - chr7.3:29635689-29635708 None:intergenic 55.0%
GCTGACAGGAAAGGTCACCA+GGG + chr7.3:29637870-29637889 MS.gene42227:CDS 55.0%
GGAAACATCGTACCACCACC+GGG - chr7.3:29637930-29637949 None:intergenic 55.0%
GGAACCCGATACCCATTAGG+CGG - chr7.3:29636018-29636037 None:intergenic 55.0%
GGAAGACACGAATCTGCTGC+TGG - chr7.3:29638619-29638638 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr7.3:29637348-29637367 None:intergenic 55.0%
GGTGGATCATATGCCGTGTG+AGG + chr7.3:29635897-29635916 MS.gene42227:CDS 55.0%
TCATCTCCGGTCCTCCTGTT+CGG + chr7.3:29638491-29638510 MS.gene42227:CDS 55.0%
TCCTGTTTAGCCCACCGAAC+AGG - chr7.3:29638508-29638527 None:intergenic 55.0%
TGAGGCTTGTCCTGCAAGTG+AGG + chr7.3:29635876-29635895 MS.gene42227:CDS 55.0%
TGCTGACAGGAAAGGTCACC+AGG + chr7.3:29637869-29637888 MS.gene42227:CDS 55.0%
TGTTTAGCCCACCGAACAGG+AGG - chr7.3:29638505-29638524 None:intergenic 55.0%
TTCCTCCTCGGATCCTCACA+CGG - chr7.3:29635913-29635932 None:intergenic 55.0%
! AGTTAGCCTCTCTGGCCACT+TGG - chr7.3:29638907-29638926 None:intergenic 55.0%
! CGTGTGTTGGTGCGTTTCCA+TGG - chr7.3:29635676-29635695 None:intergenic 55.0%
! GATCGAATTTTGCGGCCGGA+GGG + chr7.3:29640399-29640418 MS.gene42227:CDS 55.0%
! GTGTTGGTGCGTTTCCATGG+TGG - chr7.3:29635673-29635692 None:intergenic 55.0%
! GTTAGCCTCTCTGGCCACTT+GGG - chr7.3:29638906-29638925 None:intergenic 55.0%
! TCCACCGCCTAATGGGTATC+GGG + chr7.3:29636011-29636030 MS.gene42227:CDS 55.0%
! TGATCGAATTTTGCGGCCGG+AGG + chr7.3:29640398-29640417 MS.gene42227:CDS 55.0%
!! GCCTAATGGGTATCGGGTTC+CGG + chr7.3:29636017-29636036 MS.gene42227:CDS 55.0%
!! TCCTGTTCGGTGGGCTAAAC+AGG + chr7.3:29638504-29638523 MS.gene42227:CDS 55.0%
ACAAGGCCTTTGCCACAGCC+TGG - chr7.3:29638549-29638568 None:intergenic 60.0%
ACAGCGCAACCGTCTTGTGG+TGG + chr7.3:29635819-29635838 MS.gene42227:CDS 60.0%
ACAGGAAAGGTCACCAGGGG+TGG + chr7.3:29637874-29637893 MS.gene42227:CDS 60.0%
ACCCGATACCCATTAGGCGG+TGG - chr7.3:29636015-29636034 None:intergenic 60.0%
CATGGGATGTGGGGTAAGCG+AGG + chr7.3:29638028-29638047 MS.gene42227:intron 60.0%
GCGCTGTTGTGGATCAACGG+TGG - chr7.3:29635806-29635825 None:intergenic 60.0%
GGCTTGTCCTGCAAGTGAGG+TGG + chr7.3:29635879-29635898 MS.gene42227:CDS 60.0%
TCCTTTGCCGGAGGAGACTG+CGG + chr7.3:29635978-29635997 MS.gene42227:CDS 60.0%
TTCAGGAGAGGGGACCTCGA+AGG - chr7.3:29638936-29638955 None:intergenic 60.0%
!! ATGGGTATCGGGTTCCGGTG+AGG + chr7.3:29636022-29636041 MS.gene42227:CDS 60.0%
ACCGCAGTCTCCTCCGGCAA+AGG - chr7.3:29635982-29636001 None:intergenic 65.0%
AGCCCACCGAACAGGAGGAC+CGG - chr7.3:29638500-29638519 None:intergenic 65.0%
CTCCGGTCCTCCTGTTCGGT+GGG + chr7.3:29638495-29638514 MS.gene42227:CDS 65.0%
GAGAGGGGACCTCGAAGGTG+CGG - chr7.3:29638931-29638950 None:intergenic 65.0%
GGCTAACTGCCGCACCTTCG+AGG + chr7.3:29638919-29638938 MS.gene42227:CDS 65.0%
TCTCCGGTCCTCCTGTTCGG+TGG + chr7.3:29638494-29638513 MS.gene42227:CDS 65.0%
TGCCGTGTGAGGATCCGAGG+AGG + chr7.3:29635908-29635927 MS.gene42227:CDS 65.0%
! GGTATCGGGTTCCGGTGAGG+TGG + chr7.3:29636025-29636044 MS.gene42227:CDS 65.0%
! GGTGCGGCAGTTAGCCTCTC+TGG - chr7.3:29638915-29638934 None:intergenic 65.0%
CAGCACACGGCGGCGACCAA+GGG - chr7.3:29635776-29635795 None:intergenic 70.0%
CGGTGGACGGAGCCAGCACA+CGG - chr7.3:29635789-29635808 None:intergenic 70.0%
GCGGCCGGAGGGAACTGTTG+TGG + chr7.3:29640410-29640429 MS.gene42227:CDS 70.0%
TGGACGGAGCCAGCACACGG+CGG - chr7.3:29635786-29635805 None:intergenic 70.0%
CACACGGCGGCGACCAAGGG+TGG - chr7.3:29635773-29635792 None:intergenic 75.0%
CCAGCACACGGCGGCGACCA+AGG - chr7.3:29635777-29635796 None:intergenic 75.0%
CCTTGGTCGCCGCCGTGTGC+TGG + chr7.3:29635774-29635793 MS.gene42227:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 29635652 29640575 29635652 ID=MS.gene42227
chr7.3 mRNA 29635652 29640575 29635652 ID=MS.gene42227.t1;Parent=MS.gene42227
chr7.3 exon 29635652 29636065 29635652 ID=MS.gene42227.t1.exon1;Parent=MS.gene42227.t1
chr7.3 CDS 29635652 29636065 29635652 ID=cds.MS.gene42227.t1;Parent=MS.gene42227.t1
chr7.3 exon 29637837 29638040 29637837 ID=MS.gene42227.t1.exon2;Parent=MS.gene42227.t1
chr7.3 CDS 29637837 29638040 29637837 ID=cds.MS.gene42227.t1;Parent=MS.gene42227.t1
chr7.3 exon 29638137 29638347 29638137 ID=MS.gene42227.t1.exon3;Parent=MS.gene42227.t1
chr7.3 CDS 29638137 29638347 29638137 ID=cds.MS.gene42227.t1;Parent=MS.gene42227.t1
chr7.3 exon 29638437 29638698 29638437 ID=MS.gene42227.t1.exon4;Parent=MS.gene42227.t1
chr7.3 CDS 29638437 29638698 29638437 ID=cds.MS.gene42227.t1;Parent=MS.gene42227.t1
chr7.3 exon 29638833 29639207 29638833 ID=MS.gene42227.t1.exon5;Parent=MS.gene42227.t1
chr7.3 CDS 29638833 29639207 29638833 ID=cds.MS.gene42227.t1;Parent=MS.gene42227.t1
chr7.3 exon 29639673 29639768 29639673 ID=MS.gene42227.t1.exon6;Parent=MS.gene42227.t1
chr7.3 CDS 29639673 29639768 29639673 ID=cds.MS.gene42227.t1;Parent=MS.gene42227.t1
chr7.3 exon 29640368 29640575 29640368 ID=MS.gene42227.t1.exon7;Parent=MS.gene42227.t1
chr7.3 CDS 29640368 29640575 29640368 ID=cds.MS.gene42227.t1;Parent=MS.gene42227.t1
Gene Sequence

>MS.gene42227

ATGCGTCACTCAAATTTCCCACCATGGAAACGCACCAACACACGTCAATGGCGTCTCATCGACCTCATTTCCATTGCCTTTTTCTCATTACTCTTTCTCTTCTTTGTTCTCTTTTACACCACCCTTGGTCGCCGCCGTGTGCTGGCTCCGTCCACCGTTGATCCACAACAGCGCAACCGTCTTGTGGTGGCTATTGAGGAAGGGATGTTAAATGGGAAGAGTATTGAGGCTTGTCCTGCAAGTGAGGTGGATCATATGCCGTGTGAGGATCCGAGGAGGAATAGTCAGTTGAGTAGAGAGATGAATTACTATAGGGAGAGACATTGTCCTTTGCCGGAGGAGACTGCGGTTTGTTTGATTCCACCGCCTAATGGGTATCGGGTTCCGGTGAGGTGGCCTGAAAGCATGCATAAGGTGTGGTGTAGTTTTTTGGAAAGTTGGTTAATGTTTAGTTGCTTGTTTTAACTTTTAATTTTAACTGTAATACTTTGTTATCTACGTAGCACTCATGTACTTAAAAGCGTGTTTGGTGTCTGACACATGTGAGTGTCTGACATAGTGACACTGACACACGTGGTTACATGCAATTCCCTTGATTTGAAAAACCACACGTTTACCTGCATCAATTGTTTTCGGTAATCGATTTGACATCAGTTGACTCACATTACACGTTTGCTATATCATCTTTAAATAATCTTCACTGTTTATTTGAGATCGGACGTCAAAGATCAATAAAGTGTTGCAGTAGCGGAGAATAAAGTAAGTGTAGCGGAGATGATGTTGCCTTGGATGTATGGTAAGACCATTTGGGAGGGAATTAGAAATTACAACATTAGAGAGGGAGTTGGAGTAGCACCTTGAGTAGAAAAGATGGTGGAAAATAGACTTAGGTGGTTTGGGCGTGTAAAGAGAAGACCTGTAGATTGTGTAGTAAGGAGAGTAGATCAGATGGAGGATAGTCAAATCACTAGAGGTAGAGGAAGACCTAGAAAAACTATAAGAGAAACTATTAGGAAAGATTTAGAGATTAATGAGTTGGATGCAAATGTGGTTTATGATAGAACATTATGCCGTAATTTGATCCATGTAGCCGACTCCACTTAGTGGGATAAGGCTTGGTTGTTGTTGAAAGAACAAAATTTAAAAACTGTTGTGTAGGGGTTGTTTATACTGTTAACCAATTATAAAATGCCATGGAGATTAAAATTTTCATTTGATATTAAATTGATAATGGTCATATTTATACTGTTGAATATATAATACCATTCTCAAAACATAAGGATACACATCTAAGTTTTGTTTAAGTAGAAACTAGATTGTCTCAATTTTTTCAGAAGCTCTCACATTTATCTCGCGTACAAGTACCTTTAAATTTAGAGGTATTTTCCAGGATTGAAGATCAATCTTATTTTAACTGAGAAGCTACTGCAATGAGGGCAAGTTAGTGAAAATGGTAGACATGATGCATTATTGGACACTGGTGGTTTTGATTTATGTTGCAGACTTCATATATGGAAGAAGAATTCAGCTGTTGTCTTATTGTTGCTATTATGGTTGTGGTGCCTTGTTATGTGTAACTTGGAGGGAGTTATTGTGTTTTGTGAAGGACTTAGGAGCTTGTTTTTGTGGATTTTTTTTTTGTTTAGAATGGGATAGTGCTGTATGTTTGGGTTGTATTTACTGGCATCTACTCCCTCCGTCCCTTAATGTAACCCCCCTTTGCTTTTTTCACATTTCTTAAGAAAAGTTGTCGGTGTAATTAATGTGTCTGTTTTGTGTATTAATATTATCAAATTGTCCTTTGTTTGTATGTGTAATAAATTTGATTGTTCATATTTCAAGACAAATTAGTAGTATTAATTAGGGGTATGTTTAGGAAAAAAGTAATAAATGCATCTAGTATTTTGAAAAGGAGTTTACATTTAGGGACAAAAATAAAATCAAATGGGTGTTTAGATATAGGGACGGAGGGAGTAGTTTACAGTGTGATGAAATTGAGATGAGGTGAGAATGTGAAGCCAAATTAGGATTCAATTTGTAGTGCAATGAAATTAATATAGAGGTGATAGGCTGATGGAATGGCAAGAGAGACATTAATCGGTTGATTCATCTGCTCTTGGAATGTTGATATTTGTACTCTTTTATTTATCTGTCTTAATGCATTAATATAATATGTTTTGTGCAGATATGGCATAGCAACATGCCCCACAACAAGATTGCTGACAGGAAAGGTCACCAGGGGTGGATGAAACGAGAAGGTCAACACTTTATATTCCCCGGTGGTGGTACGATGTTTCCAGATGGAGCAGAACAATATATCAAAAAACTTAGTCAATACATTCCCATAAATGGAGGTGTTCTGAGGACTGCACTTGACATGGGATGTGGGGTAAGCGAGGTTTTCCTCTTTACTTTTTAAACCTTATACTAGAATTGATCACTGTTTAACATTCAAATACATCCATTTTACTCCATTTTACTTCAGGTTGCTAGTTTTGGAGGATATTTACTAGCTCAAGATATTTTAACCATGTCATTTGCTCCAAGAGATTCACATAAATCGCAGATACAATTTGCCTTGGAAAGAGGAATACCGGCTTTTGTTGCTATGCTTGGCACTCGAAGACTTCCATTTCCTGCTTTTGGATTTGACTTGGTTCATTGTTCTCGGTGTTTGATACCGTTTACAGCCTACAGTAAGTTCTGCATTGCAGATCGCTACTGCATATCTTCAAATATTCTATATATGCTTGTCACTTCCTTATGCAGAAAATTTACTATGCAGATGCAACTTATTTCATTGAAGTGGATAGATTACTTCGCCCTGGTGGATATCTAGTCATCTCCGGTCCTCCTGTTCGGTGGGCTAAACAGGAAAAAGAATGGTCAGATCTCCAGGCTGTGGCAAAGGCCTTGTGTTATGAACAGATAACTGTACATGAAAACACTGCAATCTGGAAGAAGCCAGCAGCAGATTCGTGTCTTCCTAATGGAAATGAGTTTGGTCTTGAATTATGTGATGATTCTGGGGACCTAAGTCAAGCTTGGTAAATTTCCTTTGATTATCTTTGCATCTCTTCTTGTCTTGTATAGTTGTTTAACACTTCAATGAATGCTGAGATTGTGAAAATATCTCTTATTAATTACTTAAAATTGCAAAACTAAGATGATCATTTTGCAGGTACTTTAAATTGAAGAAATGTGTAAGTAGTACGTCGTCTATCAAAGGAGATTATGCTATTGGAACAATTCCCAAGTGGCCAGAGAGGCTAACTGCCGCACCTTCGAGGTCCCCTCTCCTGAAAACCGGTGTTGATGTATATGAGGCTGACACTAAGCTGTGGGTACGGAGGGTTGCACATTATAAGAATTCACTAAATATAAAGTTGGGGACTCCATCAATACGCAACGTTATGGACATGAATGCATTATATGGGGGTTTTGCAGCTGCCTTAAAATCTGATCCTGTGTGGGTGATGAATGTAGTTCCAGCTCAAAAGCCACCAACTCTTGATGCGATCTTTGACAGAGGACTTATTGGTGTCTATCATGATTGGTGAGTTTTTGCTGAAAGTTCATGCATCTTCTCTTAAAGGGATTATTTTCCAGAAACATTAGGGTTGTGATCTTATGGCCTATATCTTAATACTTGGCAAAGCAAACTTCCATTTTTCCTTGCAGACATGATTTTAAAATAAGATATGTGGTGGAAAATTTGTGTATTGCATGTAATGATAATTGTCTTGAGTTGCTTTCATGATACTTACGGCTTTACCTTTTTTTTTTTTTTTTTTTTTGGCAATTACAACTCATATATATCATGTGAATGTGTGGTAGATGTTGTTGTAAGTGAAAAGTAATGAACTTATGCTCTCAGATTGTATTTTAATTTTTAATCTGGATGCGGTTCGGATATTTGTCAATTTTATTTATTTATTTAGTGCATTTGAACTTGTATATCCATTTGTATCGTAATGGATGTATTTTCTTGGAGAATCTAAGTTGTAGGTTTTGTTCCCAGGTGTGAACCTTTTTCAACATACCCTCGAACTTATGATCTGATCCATGTGGCCAGCATTGAATCACTTATAAAAGATCCAGCTACTGGTAAAAAAAGGTATTTTTCTTGTTAAACTGCTAATCTGATGTCACATCTCTAGGTTACCTAAGCTGTTATATAATCGATTTAAGAGATCTTTTTTATCGTAACAAGACTTGACCTTTATAGATCTCGACAATTTGATTGAATTCCTAAATTGAAAAACTCTACTAATTTTTTTTTTACAGATATTTAAGAGATTGCTGCTTGAACTAAGTTGCACATATTAATTTTCTAAATTTGTAGTTGAAATTCTACAATATTTCTTGGAAGTTTTGCCTGTGCTGCTTCTTTGAAACATTAATTCACTATGATTAACTTTTTAATGTGAAAATGAATGTTTATATCGTTAACTTGAATTTAAATGTCTGAAACTTTATAAATGTAAAAAATATGGTTTACTTTTGCTATGAGGTTACAGTATTCTAAATAGTGAGTATGTAGAGTTTGAATCAGTGCAAGGTATTTGATGTTCAATGGTTTCCTCCTATTAGATTCATGTCAAACCGCAACTTACAGCAACAGCCTCTAGGCTAAAGCAAATTTTATTTTTTTACCTTGCTTTAATCATTGATGTTTTGTGTCCTCAACCTGATTTCTTCACAATTTCATTGTAGATGTAATATTGTTGATTTGATGGTGGAAATTGATCGAATTTTGCGGCCGGAGGGAACTGTTGTGGTAAGAGATGCTCCCGAAGTAATTGACAAAGTAGCGCAAATTTCTCATGCGGTGAGGTGGAAGCCGACCATTTATGATAAAGAACCTGACTCACACGGCAGAGAAAAAATTCTAGTTTTGACCAAGACCTTATGGAAGCTCTAA
Protein sequence

>MS.gene42227.t1

MRHSNFPPWKRTNTRQWRLIDLISIAFFSLLFLFFVLFYTTLGRRRVLAPSTVDPQQRNRLVVAIEEGMLNGKSIEACPASEVDHMPCEDPRRNSQLSREMNYYRERHCPLPEETAVCLIPPPNGYRVPVRWPESMHKIWHSNMPHNKIADRKGHQGWMKREGQHFIFPGGGTMFPDGAEQYIKKLSQYIPINGGVLRTALDMGCGVASFGGYLLAQDILTMSFAPRDSHKSQIQFALERGIPAFVAMLGTRRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVRWAKQEKEWSDLQAVAKALCYEQITVHENTAIWKKPAADSCLPNGNEFGLELCDDSGDLSQAWYFKLKKCVSSTSSIKGDYAIGTIPKWPERLTAAPSRSPLLKTGVDVYEADTKLWVRRVAHYKNSLNIKLGTPSIRNVMDMNALYGGFAAALKSDPVWVMNVVPAQKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHVASIESLIKDPATGKKRCNIVDLMVEIDRILRPEGTVVVRDAPEVIDKVAQISHAVRWKPTIYDKEPDSHGREKILVLTKTLWKL