Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97456.t1 | XP_003621015.2 | 91.7 | 386 | 32 | 0 | 1 | 386 | 184 | 569 | 4.00E-211 | 743.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97456.t1 | Q9ZW75 | 52.7 | 385 | 176 | 3 | 1 | 385 | 231 | 609 | 3.9e-122 | 439.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97456.t1 | G7KWQ3 | 91.7 | 386 | 32 | 0 | 1 | 386 | 184 | 569 | 2.9e-211 | 743.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene97456 | 0.801017 | 1.10E-48 | -1.69E-46 |
| MS.gene049346 | MS.gene97456 | 0.858118 | 1.03E-62 | -1.69E-46 |
| MS.gene049910 | MS.gene97456 | 0.837959 | 3.82E-57 | -1.69E-46 |
| MS.gene049993 | MS.gene97456 | 0.85813 | 1.02E-62 | -1.69E-46 |
| MS.gene050301 | MS.gene97456 | 0.81548 | 9.05E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene97456 | 0.828492 | 8.72E-55 | -1.69E-46 |
| MS.gene050404 | MS.gene97456 | 0.818029 | 2.43E-52 | -1.69E-46 |
| MS.gene050406 | MS.gene97456 | 0.832931 | 7.13E-56 | -1.69E-46 |
| MS.gene050426 | MS.gene97456 | -0.829662 | 4.54E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene97456 | 0.823126 | 1.64E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene97456 | 0.823866 | 1.10E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene97456 | 0.838852 | 2.25E-57 | -1.69E-46 |
| MS.gene051171 | MS.gene97456 | 0.826789 | 2.24E-54 | -1.69E-46 |
| MS.gene051240 | MS.gene97456 | 0.858421 | 8.34E-63 | -1.69E-46 |
| MS.gene051242 | MS.gene97456 | 0.841867 | 3.66E-58 | -1.69E-46 |
| MS.gene051525 | MS.gene97456 | 0.85115 | 1.07E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene97456 | 0.834273 | 3.30E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene97456 | 0.830072 | 3.61E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene97456 | 0.831786 | 1.37E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene97456 | -0.875343 | 3.32E-68 | -1.69E-46 |
| MS.gene052077 | MS.gene97456 | 0.834601 | 2.73E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene97456 | 0.814989 | 1.16E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene97456 | 0.818087 | 2.35E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene97456 | 0.838382 | 2.97E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene97456 | 0.829902 | 3.97E-55 | -1.69E-46 |
| MS.gene052590 | MS.gene97456 | 0.801536 | 8.60E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene97456 | 0.81309 | 3.05E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene97456 | 0.869815 | 2.33E-66 | -1.69E-46 |
| MS.gene053557 | MS.gene97456 | 0.815435 | 9.26E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene97456 | 0.849911 | 2.39E-60 | -1.69E-46 |
| MS.gene053907 | MS.gene97456 | 0.806685 | 7.30E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene97456 | 0.851188 | 1.04E-60 | -1.69E-46 |
| MS.gene054183 | MS.gene97456 | 0.852471 | 4.52E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene97456 | 0.827279 | 1.71E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene97456 | 0.82128 | 4.39E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene97456 | 0.86794 | 9.45E-66 | -1.69E-46 |
| MS.gene054983 | MS.gene97456 | 0.848231 | 6.99E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene97456 | 0.805238 | 1.47E-49 | -1.69E-46 |
| MS.gene055217 | MS.gene97456 | 0.823255 | 1.53E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene97456 | 0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene97456 | 0.801089 | 1.06E-48 | -1.69E-46 |
| MS.gene055428 | MS.gene97456 | 0.812521 | 4.07E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene97456 | 0.874375 | 7.09E-68 | -1.69E-46 |
| MS.gene056191 | MS.gene97456 | 0.813851 | 2.08E-51 | -1.69E-46 |
| MS.gene056305 | MS.gene97456 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene056451 | MS.gene97456 | 0.84343 | 1.41E-58 | -1.69E-46 |
| MS.gene056612 | MS.gene97456 | 0.812394 | 4.33E-51 | -1.69E-46 |
| MS.gene056633 | MS.gene97456 | 0.820109 | 8.16E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene97456 | 0.825332 | 4.97E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene97456 | -0.819127 | 1.37E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene97456 | 0.825314 | 5.02E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene97456 | 0.832922 | 7.17E-56 | -1.69E-46 |
| MS.gene057121 | MS.gene97456 | 0.832473 | 9.27E-56 | -1.69E-46 |
| MS.gene057639 | MS.gene97456 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene97456 | 0.848327 | 6.58E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene97456 | 0.850375 | 1.77E-60 | -1.69E-46 |
| MS.gene058142 | MS.gene97456 | 0.867638 | 1.18E-65 | -1.69E-46 |
| MS.gene058233 | MS.gene97456 | 0.84336 | 1.47E-58 | -1.69E-46 |
| MS.gene058276 | MS.gene97456 | 0.837902 | 3.95E-57 | -1.69E-46 |
| MS.gene058710 | MS.gene97456 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene058746 | MS.gene97456 | 0.838201 | 3.31E-57 | -1.69E-46 |
| MS.gene05886 | MS.gene97456 | 0.802748 | 4.84E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene97456 | 0.821188 | 4.61E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene97456 | 0.835483 | 1.63E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene97456 | 0.831339 | 1.77E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene97456 | 0.83494 | 2.24E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene97456 | 0.837211 | 5.94E-57 | -1.69E-46 |
| MS.gene059894 | MS.gene97456 | 0.837266 | 5.75E-57 | -1.69E-46 |
| MS.gene060247 | MS.gene97456 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene97456 | 0.82605 | 3.36E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene97456 | 0.857227 | 1.88E-62 | -1.69E-46 |
| MS.gene061114 | MS.gene97456 | -0.817328 | 3.49E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene97456 | 0.807903 | 4.03E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene97456 | MS.gene048977 | PPI |
| MS.gene97456 | MS.gene06124 | PPI |
| MS.gene97456 | MS.gene20195 | PPI |
| MS.gene97456 | MS.gene55843 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97456.t1 | MTR_7g006060 | 96.114 | 386 | 15 | 0 | 1 | 386 | 184 | 569 | 0.0 | 780 |
| MS.gene97456.t1 | MTR_7g076170 | 53.646 | 384 | 172 | 3 | 1 | 382 | 240 | 619 | 6.66e-157 | 456 |
| MS.gene97456.t1 | MTR_0019s0120 | 55.858 | 367 | 156 | 3 | 1 | 365 | 244 | 606 | 3.05e-154 | 449 |
| MS.gene97456.t1 | MTR_8g100075 | 51.571 | 382 | 181 | 2 | 1 | 382 | 237 | 614 | 3.45e-154 | 449 |
| MS.gene97456.t1 | MTR_1g101370 | 53.005 | 366 | 171 | 1 | 1 | 365 | 232 | 597 | 2.62e-151 | 442 |
| MS.gene97456.t1 | MTR_8g432680 | 50.909 | 385 | 182 | 4 | 1 | 382 | 244 | 624 | 1.01e-150 | 440 |
| MS.gene97456.t1 | MTR_8g055840 | 54.617 | 379 | 160 | 4 | 5 | 382 | 227 | 594 | 1.05e-148 | 434 |
| MS.gene97456.t1 | MTR_5g040360 | 52.243 | 379 | 168 | 4 | 5 | 382 | 227 | 593 | 3.05e-142 | 417 |
| MS.gene97456.t1 | MTR_4g098890 | 53.906 | 384 | 166 | 4 | 1 | 383 | 225 | 598 | 2.43e-141 | 439 |
| MS.gene97456.t1 | MTR_3g040370 | 51.507 | 365 | 166 | 3 | 1 | 365 | 224 | 577 | 4.97e-134 | 397 |
| MS.gene97456.t1 | MTR_0019s0120 | 54.576 | 295 | 128 | 3 | 1 | 293 | 244 | 534 | 1.95e-118 | 354 |
| MS.gene97456.t1 | MTR_5g026930 | 46.961 | 362 | 183 | 6 | 1 | 360 | 212 | 566 | 5.17e-113 | 342 |
| MS.gene97456.t1 | MTR_8g071280 | 46.721 | 366 | 180 | 7 | 1 | 361 | 210 | 565 | 1.20e-109 | 333 |
| MS.gene97456.t1 | MTR_7g076150 | 43.291 | 395 | 192 | 9 | 1 | 386 | 71 | 442 | 1.08e-103 | 313 |
| MS.gene97456.t1 | MTR_8g432620 | 43.968 | 373 | 180 | 8 | 1 | 364 | 227 | 579 | 1.09e-102 | 316 |
| MS.gene97456.t1 | MTR_7g076150 | 43.291 | 395 | 192 | 9 | 1 | 386 | 214 | 585 | 1.74e-101 | 312 |
| MS.gene97456.t1 | MTR_1g069785 | 40.568 | 387 | 211 | 9 | 1 | 384 | 211 | 581 | 1.01e-95 | 298 |
| MS.gene97456.t1 | MTR_1g075900 | 42.480 | 379 | 193 | 10 | 1 | 374 | 240 | 598 | 5.43e-95 | 296 |
| MS.gene97456.t1 | MTR_3g071530 | 42.077 | 366 | 185 | 10 | 1 | 360 | 285 | 629 | 2.01e-94 | 296 |
| MS.gene97456.t1 | MTR_1g442840 | 43.836 | 365 | 184 | 10 | 1 | 361 | 128 | 475 | 4.60e-94 | 291 |
| MS.gene97456.t1 | MTR_1g442840 | 43.836 | 365 | 184 | 10 | 1 | 361 | 241 | 588 | 7.06e-93 | 291 |
| MS.gene97456.t1 | MTR_1g029730 | 43.005 | 386 | 192 | 11 | 1 | 379 | 285 | 649 | 9.60e-93 | 291 |
| MS.gene97456.t1 | MTR_5g080720 | 40.633 | 379 | 203 | 9 | 1 | 374 | 268 | 629 | 2.31e-91 | 288 |
| MS.gene97456.t1 | MTR_3g096480 | 42.703 | 370 | 190 | 7 | 1 | 361 | 400 | 756 | 2.49e-91 | 291 |
| MS.gene97456.t1 | MTR_3g068990 | 40.633 | 379 | 203 | 10 | 1 | 374 | 296 | 657 | 4.18e-90 | 285 |
| MS.gene97456.t1 | MTR_5g026930 | 46.780 | 295 | 148 | 6 | 1 | 293 | 212 | 499 | 5.64e-88 | 275 |
| MS.gene97456.t1 | MTR_5g083150 | 39.730 | 370 | 192 | 11 | 1 | 360 | 233 | 581 | 1.40e-87 | 277 |
| MS.gene97456.t1 | MTR_3g088790 | 40.000 | 375 | 194 | 10 | 1 | 361 | 365 | 722 | 1.71e-84 | 272 |
| MS.gene97456.t1 | MTR_8g093880 | 39.842 | 379 | 204 | 9 | 1 | 369 | 430 | 794 | 3.56e-82 | 268 |
| MS.gene97456.t1 | MTR_1g051055 | 39.837 | 369 | 191 | 9 | 1 | 361 | 234 | 579 | 8.08e-81 | 259 |
| MS.gene97456.t1 | MTR_8g076650 | 38.919 | 370 | 200 | 8 | 1 | 361 | 518 | 870 | 9.72e-81 | 265 |
| MS.gene97456.t1 | MTR_5g021100 | 38.172 | 372 | 202 | 9 | 1 | 361 | 461 | 815 | 5.51e-79 | 259 |
| MS.gene97456.t1 | MTR_5g080720 | 41.875 | 320 | 164 | 9 | 1 | 315 | 268 | 570 | 7.50e-78 | 251 |
| MS.gene97456.t1 | MTR_3g074780 | 35.696 | 395 | 206 | 13 | 6 | 373 | 305 | 678 | 1.11e-68 | 229 |
| MS.gene97456.t1 | MTR_5g064080 | 34.091 | 396 | 219 | 9 | 1 | 373 | 284 | 660 | 3.52e-67 | 225 |
| MS.gene97456.t1 | MTR_1g022255 | 37.127 | 369 | 197 | 11 | 1 | 361 | 338 | 679 | 7.70e-66 | 222 |
| MS.gene97456.t1 | MTR_4g083030 | 32.997 | 397 | 206 | 12 | 1 | 373 | 234 | 594 | 1.08e-65 | 219 |
| MS.gene97456.t1 | MTR_1g022255 | 29.924 | 264 | 152 | 9 | 1 | 257 | 338 | 575 | 4.06e-26 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97456.t1 | AT2G43200 | 56.364 | 385 | 162 | 3 | 1 | 385 | 231 | 609 | 9.08e-163 | 470 |
| MS.gene97456.t1 | AT2G43200 | 56.364 | 385 | 162 | 3 | 1 | 385 | 231 | 609 | 9.08e-163 | 470 |
| MS.gene97456.t1 | AT4G10440 | 52.480 | 383 | 177 | 2 | 1 | 382 | 232 | 610 | 8.74e-157 | 456 |
| MS.gene97456.t1 | AT1G33170 | 52.742 | 383 | 177 | 2 | 1 | 382 | 249 | 628 | 1.40e-156 | 455 |
| MS.gene97456.t1 | AT1G26850 | 55.145 | 379 | 164 | 3 | 5 | 382 | 229 | 602 | 3.93e-155 | 451 |
| MS.gene97456.t1 | AT1G26850 | 55.145 | 379 | 164 | 3 | 5 | 382 | 229 | 602 | 3.93e-155 | 451 |
| MS.gene97456.t1 | AT2G45750 | 53.281 | 381 | 169 | 4 | 1 | 376 | 226 | 602 | 1.46e-151 | 442 |
| MS.gene97456.t1 | AT4G00750 | 52.073 | 386 | 179 | 3 | 1 | 383 | 235 | 617 | 6.85e-151 | 441 |
| MS.gene97456.t1 | AT4G18030 | 50.260 | 384 | 179 | 5 | 1 | 382 | 224 | 597 | 6.02e-133 | 394 |
| MS.gene97456.t1 | AT4G19120 | 47.541 | 366 | 177 | 8 | 1 | 360 | 210 | 566 | 1.11e-112 | 342 |
| MS.gene97456.t1 | AT4G19120 | 47.541 | 366 | 177 | 8 | 1 | 360 | 210 | 566 | 1.11e-112 | 342 |
| MS.gene97456.t1 | AT1G31850 | 46.703 | 364 | 183 | 7 | 1 | 360 | 216 | 572 | 1.57e-112 | 341 |
| MS.gene97456.t1 | AT1G31850 | 46.703 | 364 | 183 | 7 | 1 | 360 | 216 | 572 | 1.57e-112 | 341 |
| MS.gene97456.t1 | AT1G31850 | 46.703 | 364 | 183 | 7 | 1 | 360 | 216 | 572 | 1.57e-112 | 341 |
| MS.gene97456.t1 | AT1G31850 | 46.703 | 364 | 183 | 7 | 1 | 360 | 216 | 572 | 1.57e-112 | 341 |
| MS.gene97456.t1 | AT1G26850 | 53.986 | 276 | 126 | 1 | 5 | 280 | 229 | 503 | 1.89e-109 | 330 |
| MS.gene97456.t1 | AT4G00740 | 42.785 | 395 | 194 | 11 | 1 | 386 | 220 | 591 | 1.41e-99 | 308 |
| MS.gene97456.t1 | AT4G00740 | 42.785 | 395 | 194 | 11 | 1 | 386 | 220 | 591 | 1.41e-99 | 308 |
| MS.gene97456.t1 | AT5G06050 | 43.272 | 379 | 193 | 9 | 1 | 374 | 292 | 653 | 1.34e-97 | 305 |
| MS.gene97456.t1 | AT2G39750 | 41.995 | 381 | 195 | 10 | 1 | 376 | 320 | 679 | 1.13e-95 | 300 |
| MS.gene97456.t1 | AT1G04430 | 44.211 | 380 | 186 | 11 | 1 | 375 | 233 | 591 | 3.36e-93 | 292 |
| MS.gene97456.t1 | AT1G04430 | 44.211 | 380 | 186 | 11 | 1 | 375 | 233 | 591 | 3.36e-93 | 292 |
| MS.gene97456.t1 | AT1G04430 | 44.211 | 380 | 186 | 11 | 1 | 375 | 233 | 591 | 3.36e-93 | 292 |
| MS.gene97456.t1 | AT4G14360 | 43.288 | 365 | 186 | 10 | 1 | 361 | 225 | 572 | 2.14e-92 | 290 |
| MS.gene97456.t1 | AT4G14360 | 43.288 | 365 | 186 | 10 | 1 | 361 | 225 | 572 | 2.14e-92 | 290 |
| MS.gene97456.t1 | AT1G77260 | 40.464 | 388 | 205 | 10 | 1 | 383 | 284 | 650 | 4.88e-92 | 290 |
| MS.gene97456.t1 | AT3G23300 | 40.933 | 386 | 207 | 10 | 1 | 382 | 228 | 596 | 8.05e-92 | 288 |
| MS.gene97456.t1 | AT3G23300 | 40.933 | 386 | 207 | 10 | 1 | 382 | 228 | 596 | 8.05e-92 | 288 |
| MS.gene97456.t1 | AT5G64030 | 41.351 | 370 | 195 | 7 | 1 | 361 | 440 | 796 | 1.48e-88 | 285 |
| MS.gene97456.t1 | AT5G14430 | 43.956 | 364 | 185 | 9 | 1 | 361 | 229 | 576 | 7.40e-88 | 278 |
| MS.gene97456.t1 | AT5G14430 | 43.956 | 364 | 185 | 9 | 1 | 361 | 229 | 576 | 8.32e-88 | 278 |
| MS.gene97456.t1 | AT2G40280 | 39.946 | 373 | 189 | 11 | 1 | 364 | 222 | 568 | 9.34e-88 | 277 |
| MS.gene97456.t1 | AT4G19120 | 47.492 | 299 | 142 | 8 | 1 | 293 | 210 | 499 | 1.15e-86 | 271 |
| MS.gene97456.t1 | AT5G04060 | 40.761 | 368 | 186 | 11 | 1 | 361 | 231 | 573 | 7.87e-85 | 270 |
| MS.gene97456.t1 | AT1G29470 | 41.129 | 372 | 190 | 10 | 1 | 360 | 382 | 736 | 1.22e-83 | 271 |
| MS.gene97456.t1 | AT1G29470 | 41.129 | 372 | 190 | 10 | 1 | 360 | 382 | 736 | 1.22e-83 | 271 |
| MS.gene97456.t1 | AT2G34300 | 39.844 | 384 | 200 | 10 | 1 | 371 | 382 | 747 | 2.60e-83 | 270 |
| MS.gene97456.t1 | AT2G34300 | 39.844 | 384 | 200 | 10 | 1 | 371 | 382 | 747 | 2.60e-83 | 270 |
| MS.gene97456.t1 | AT2G34300 | 39.844 | 384 | 200 | 10 | 1 | 371 | 382 | 747 | 2.60e-83 | 270 |
| MS.gene97456.t1 | AT3G56080 | 37.838 | 370 | 204 | 10 | 1 | 364 | 246 | 595 | 3.99e-83 | 265 |
| MS.gene97456.t1 | AT3G10200 | 39.295 | 369 | 191 | 10 | 1 | 361 | 220 | 563 | 2.14e-81 | 260 |
| MS.gene97456.t1 | AT3G51070 | 39.084 | 371 | 202 | 8 | 1 | 361 | 513 | 869 | 1.23e-79 | 262 |
| MS.gene97456.t1 | AT3G10200 | 39.535 | 344 | 175 | 10 | 1 | 336 | 220 | 538 | 1.50e-73 | 240 |
| MS.gene97456.t1 | AT3G56080 | 39.062 | 320 | 169 | 10 | 1 | 314 | 246 | 545 | 2.20e-70 | 231 |
| MS.gene97456.t1 | AT1G78240 | 35.627 | 407 | 213 | 12 | 1 | 382 | 291 | 673 | 7.35e-69 | 229 |
| MS.gene97456.t1 | AT1G78240 | 35.627 | 407 | 213 | 12 | 1 | 382 | 291 | 673 | 7.35e-69 | 229 |
| MS.gene97456.t1 | AT3G51070 | 40.432 | 324 | 169 | 8 | 1 | 314 | 513 | 822 | 1.05e-67 | 229 |
| MS.gene97456.t1 | AT1G13860 | 33.081 | 396 | 220 | 12 | 1 | 373 | 62 | 435 | 3.50e-67 | 219 |
| MS.gene97456.t1 | AT1G19430 | 35.450 | 378 | 207 | 10 | 1 | 369 | 361 | 710 | 4.14e-66 | 223 |
| MS.gene97456.t1 | AT1G19430 | 35.450 | 378 | 207 | 10 | 1 | 369 | 361 | 710 | 4.14e-66 | 223 |
| MS.gene97456.t1 | AT1G13860 | 33.081 | 396 | 220 | 12 | 1 | 373 | 218 | 591 | 1.34e-65 | 219 |
| MS.gene97456.t1 | AT1G13860 | 33.081 | 396 | 220 | 12 | 1 | 373 | 218 | 591 | 1.34e-65 | 219 |
| MS.gene97456.t1 | AT1G13860 | 33.081 | 396 | 220 | 12 | 1 | 373 | 218 | 591 | 1.34e-65 | 219 |
| MS.gene97456.t1 | AT1G13860 | 33.081 | 396 | 220 | 12 | 1 | 373 | 218 | 591 | 1.34e-65 | 219 |
| MS.gene97456.t1 | AT2G03480 | 32.143 | 392 | 205 | 9 | 1 | 373 | 234 | 583 | 1.48e-61 | 208 |
| MS.gene97456.t1 | AT2G03480 | 32.143 | 392 | 216 | 10 | 1 | 373 | 234 | 594 | 1.71e-59 | 203 |
| MS.gene97456.t1 | AT1G19430 | 29.389 | 262 | 150 | 8 | 1 | 254 | 361 | 595 | 9.30e-27 | 112 |
| MS.gene97456.t1 | AT2G03480 | 32.749 | 171 | 107 | 4 | 1 | 171 | 234 | 396 | 5.97e-24 | 103 |
Find 0 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATTAAAAACAATAAATTA+AGG | + | 50665:13977-13996 | MS.gene97456:intron | 10.0% |
| !! | CATAAATAATAGTAAAATAC+AGG | - | 50665:12763-12782 | MS.gene97456:intergenic | 15.0% |
| !! | TTTACTAATATTACCAATAA+TGG | + | 50665:14412-14431 | MS.gene97456:intron | 15.0% |
| !!! | ATATTTGATATAGATTTTGA+AGG | - | 50665:13780-13799 | MS.gene97456:intergenic | 15.0% |
| !!! | ATGCATTTTATATGATTTAT+TGG | - | 50665:12616-12635 | MS.gene97456:intergenic | 15.0% |
| !! | AAAATATGAGTTTATGCTAT+AGG | + | 50665:12931-12950 | MS.gene97456:intron | 20.0% |
| !! | CATATTTAATGTAGAGAAAT+TGG | + | 50665:12325-12344 | MS.gene97456:intron | 20.0% |
| !! | GAAATTTGAATATAAGACAT+TGG | - | 50665:13106-13125 | MS.gene97456:intergenic | 20.0% |
| !! | GATTTAATTAATGCACTATA+AGG | - | 50665:13870-13889 | MS.gene97456:intergenic | 20.0% |
| !! | TGGTAAATATAGAAATGTTA+TGG | + | 50665:13373-13392 | MS.gene97456:CDS | 20.0% |
| !! | TTGATTCTTAATTTCTCATA+TGG | - | 50665:12288-12307 | MS.gene97456:intergenic | 20.0% |
| !! | TTTATGATCTGATACATAAA+TGG | + | 50665:12889-12908 | MS.gene97456:intron | 20.0% |
| !!! | ATTGGTAATATTAGTAAACA+TGG | - | 50665:14410-14429 | MS.gene97456:intergenic | 20.0% |
| !!! | TCAATTTAATTTGTCAAAGA+TGG | + | 50665:12382-12401 | MS.gene97456:intron | 20.0% |
| !!! | TTTTTGTTTAACTTCAAACT+TGG | + | 50665:13728-13747 | MS.gene97456:intron | 20.0% |
| ! | AAACCTATAGTGAAGATAAT+AGG | + | 50665:13297-13316 | MS.gene97456:CDS | 25.0% |
| ! | AAATAACAGATAGAATGAGA+TGG | + | 50665:14610-14629 | MS.gene97456:CDS | 25.0% |
| ! | AATAACAGATAGAATGAGAT+GGG | + | 50665:14611-14630 | MS.gene97456:CDS | 25.0% |
| ! | AATCAAACTCTTCTCATATA+AGG | - | 50665:12865-12884 | MS.gene97456:intergenic | 25.0% |
| ! | ATAGTGAAGATAATAGGATA+TGG | + | 50665:13303-13322 | MS.gene97456:CDS | 25.0% |
| ! | TATCAAATATATGTTGCTGT+TGG | + | 50665:13790-13809 | MS.gene97456:intron | 25.0% |
| ! | TATCCTATTATCTTCACTAT+AGG | - | 50665:13303-13322 | MS.gene97456:intergenic | 25.0% |
| ! | TCCAAAATAGGAGAAATTAA+AGG | - | 50665:14187-14206 | MS.gene97456:intergenic | 25.0% |
| ! | TGTCAATATACATACTGAAT+AGG | - | 50665:14362-14381 | MS.gene97456:intergenic | 25.0% |
| !! | ATATTGTTATTGAGATGCAT+CGG | + | 50665:14523-14542 | MS.gene97456:CDS | 25.0% |
| !! | CCATATCAAATGATTTTGAA+GGG | - | 50665:11762-11781 | MS.gene97456:intergenic | 25.0% |
| !! | GAGCAAATAATTTAGCATTT+TGG | + | 50665:13638-13657 | MS.gene97456:intron | 25.0% |
| !!! | ACTTTTTGATTGAGAAAAAC+AGG | - | 50665:14143-14162 | MS.gene97456:intergenic | 25.0% |
| !!! | TCCTTTAATTTCTCCTATTT+TGG | + | 50665:14183-14202 | MS.gene97456:intron | 25.0% |
| !!! | TTGTTGCTTTTTGAATCAAA+CGG | - | 50665:13470-13489 | MS.gene97456:intergenic | 25.0% |
| AAAGCTATGAACTATTGAAC+AGG | + | 50665:13126-13145 | MS.gene97456:intron | 30.0% | |
| AACAAAAACTCACTGCAAAA+TGG | - | 50665:13716-13735 | MS.gene97456:intergenic | 30.0% | |
| AATGGTGAAATATCCAGTTT+GGG | + | 50665:13430-13449 | MS.gene97456:CDS | 30.0% | |
| AATGTTATGGATATGAATGC+TGG | + | 50665:13386-13405 | MS.gene97456:CDS | 30.0% | |
| AATTCTGACACATCAGATTA+AGG | + | 50665:13954-13973 | MS.gene97456:intron | 30.0% | |
| ACAAGTCAAAACCTTAAGAA+AGG | - | 50665:13587-13606 | MS.gene97456:intergenic | 30.0% | |
| ATTCTGACACATCAGATTAA+GGG | + | 50665:13955-13974 | MS.gene97456:intron | 30.0% | |
| CATTCATTCACAAATGACAA+TGG | + | 50665:13913-13932 | MS.gene97456:intron | 30.0% | |
| CCCTTCAAAATCATTTGATA+TGG | + | 50665:11759-11778 | MS.gene97456:CDS | 30.0% | |
| CTAATAATAACAGTTCCTTC+TGG | - | 50665:14558-14577 | MS.gene97456:intergenic | 30.0% | |
| CTTGGCATTATTTATGAAAG+AGG | + | 50665:13491-13510 | MS.gene97456:CDS | 30.0% | |
| GACAGATATGTTACCATTAT+TGG | - | 50665:14428-14447 | MS.gene97456:intergenic | 30.0% | |
| GATTCAAAAAGCAACAATCT+TGG | + | 50665:13473-13492 | MS.gene97456:CDS | 30.0% | |
| GGTGAATCATTCAATCTTAT+AGG | - | 50665:13236-13255 | MS.gene97456:intergenic | 30.0% | |
| GTATCAAGTCATATGTTCTT+GGG | - | 50665:14329-14348 | MS.gene97456:intergenic | 30.0% | |
| TATGACTTGATACATGCTTA+TGG | + | 50665:14336-14355 | MS.gene97456:CDS | 30.0% | |
| TCAGATGAATTGCAAAACTT+TGG | - | 50665:12664-12683 | MS.gene97456:intergenic | 30.0% | |
| TGAGAACCATAATCATTTCT+GGG | - | 50665:14683-14702 | MS.gene97456:intergenic | 30.0% | |
| TGTATCAAGATGTCCAAAAT+AGG | - | 50665:14199-14218 | MS.gene97456:intergenic | 30.0% | |
| TGTATCAAGTCATATGTTCT+TGG | - | 50665:14330-14349 | MS.gene97456:intergenic | 30.0% | |
| TTGAGAAAAGAGAATGATGA+TGG | + | 50665:13263-13282 | MS.gene97456:CDS | 30.0% | |
| TTGAGAACCATAATCATTTC+TGG | - | 50665:14684-14703 | MS.gene97456:intergenic | 30.0% | |
| ! | ACAATATGAATGTTTGTTGC+AGG | + | 50665:14487-14506 | MS.gene97456:intron | 30.0% |
| ! | CATTGTCATTTGTGAATGAA+TGG | - | 50665:13915-13934 | MS.gene97456:intergenic | 30.0% |
| ! | GCCATATCAAATGATTTTGA+AGG | - | 50665:11763-11782 | MS.gene97456:intergenic | 30.0% |
| ! | TTCGTTATTTCGACTTCAAA+GGG | - | 50665:14260-14279 | MS.gene97456:intergenic | 30.0% |
| !! | CTTTTTAAGCTCCTTTCTTA+AGG | + | 50665:13573-13592 | MS.gene97456:intron | 30.0% |
| AAAGGAACAGAACAGTTTAG+AGG | + | 50665:12525-12544 | MS.gene97456:CDS | 35.0% | |
| AAATTACCATTAGCAGTCCA+AGG | - | 50665:11808-11827 | MS.gene97456:intergenic | 35.0% | |
| AACTTGCAATGCAAATGTGT+TGG | + | 50665:12548-12567 | MS.gene97456:CDS | 35.0% | |
| AATCCATGTAAGTTCCTATG+AGG | - | 50665:13517-13536 | MS.gene97456:intergenic | 35.0% | |
| AATTACCATTAGCAGTCCAA+GGG | - | 50665:11807-11826 | MS.gene97456:intergenic | 35.0% | |
| ACAACATTCATAACCCAAAC+TGG | - | 50665:13446-13465 | MS.gene97456:intergenic | 35.0% | |
| ACTTGCAATGCAAATGTGTT+GGG | + | 50665:12549-12568 | MS.gene97456:CDS | 35.0% | |
| AGGAGCTTAAAAAGTCAACA+AGG | - | 50665:13567-13586 | MS.gene97456:intergenic | 35.0% | |
| ATATCCTGTCAATCTCTCTT+AGG | - | 50665:12414-12433 | MS.gene97456:intergenic | 35.0% | |
| ATTTATGAAAGAGGCCTCAT+AGG | + | 50665:13500-13519 | MS.gene97456:CDS | 35.0% | |
| CAATGGTGAAATATCCAGTT+TGG | + | 50665:13429-13448 | MS.gene97456:CDS | 35.0% | |
| TAGTTAACCCTCCAGTTTAT+AGG | - | 50665:12472-12491 | MS.gene97456:intergenic | 35.0% | |
| TATACCTAAGAGAGATTGAC+AGG | + | 50665:12407-12426 | MS.gene97456:CDS | 35.0% | |
| TCACAAGTGTTTACGTTACT+AGG | - | 50665:12829-12848 | MS.gene97456:intergenic | 35.0% | |
| TCATAGGAACTTACATGGAT+TGG | + | 50665:13516-13535 | MS.gene97456:CDS | 35.0% | |
| TCTACATCAGAGTCTTTGTT+TGG | - | 50665:12977-12996 | MS.gene97456:intergenic | 35.0% | |
| TTCTCACCCAGAAATGATTA+TGG | + | 50665:14674-14693 | MS.gene97456:CDS | 35.0% | |
| ! | CTTCGTTATTTCGACTTCAA+AGG | - | 50665:14261-14280 | MS.gene97456:intergenic | 35.0% |
| ! | GTTCTTGGGTAAGTTGAAAA+GGG | - | 50665:14315-14334 | MS.gene97456:intergenic | 35.0% |
| ! | TATATGTTGCTGTTGGAACT+TGG | + | 50665:13797-13816 | MS.gene97456:intron | 35.0% |
| ! | TCATTCTCTTTTCTCAACCT+TGG | - | 50665:13260-13279 | MS.gene97456:intergenic | 35.0% |
| ! | TGTTCTTGGGTAAGTTGAAA+AGG | - | 50665:14316-14335 | MS.gene97456:intergenic | 35.0% |
| !! | CTTTGAAGTCGAAATAACGA+AGG | + | 50665:14259-14278 | MS.gene97456:intron | 35.0% |
| !!! | AACAGCATTGTTTTGTTTGC+AGG | + | 50665:14283-14302 | MS.gene97456:intron | 35.0% |
| AAAGACATCGATGAAATCGC+CGG | + | 50665:13191-13210 | MS.gene97456:CDS | 40.0% | |
| AATATGTAGCATCTACACCG+TGG | - | 50665:12220-12239 | MS.gene97456:intergenic | 40.0% | |
| AATTCATCTGACTCTGATGC+TGG | + | 50665:12673-12692 | MS.gene97456:CDS | 40.0% | |
| ACAGATAGAATGAGATGGGA+AGG | + | 50665:14615-14634 | MS.gene97456:CDS | 40.0% | |
| AGGGAGGACAAATTGCTATA+TGG | + | 50665:12584-12603 | MS.gene97456:CDS | 40.0% | |
| ATGCTCAAATCACTCTCATC+TGG | + | 50665:13353-13372 | MS.gene97456:CDS | 40.0% | |
| CACCTGATACGTCATATTGA+AGG | + | 50665:12061-12080 | MS.gene97456:intron | 40.0% | |
| CTCCTTCAATATGACGTATC+AGG | - | 50665:12066-12085 | MS.gene97456:intergenic | 40.0% | |
| GACTTCAAAGGGTCATACTA+GGG | - | 50665:14249-14268 | MS.gene97456:intergenic | 40.0% | |
| GATTGAATGATTCACCACCA+AGG | + | 50665:13240-13259 | MS.gene97456:CDS | 40.0% | |
| GGAGGGTTAACTATAAAGCA+TGG | + | 50665:12479-12498 | MS.gene97456:CDS | 40.0% | |
| GTGATGTTTGCACTTGAAAG+AGG | + | 50665:11691-11710 | MS.gene97456:CDS | 40.0% | |
| TATCGTGTCAGTATTGTGTC+TGG | + | 50665:12186-12205 | MS.gene97456:intron | 40.0% | |
| TCATCGATGTCTTTCACTTC+TGG | - | 50665:13185-13204 | MS.gene97456:intergenic | 40.0% | |
| TGAGCATCATGTTCATCACT+TGG | - | 50665:11670-11689 | MS.gene97456:intergenic | 40.0% | |
| TGTCGAATACCAACATGTGT+CGG | + | 50665:11995-12014 | MS.gene97456:intron | 40.0% | |
| TGTGTCTGGTATTTGTACCA+CGG | + | 50665:12200-12219 | MS.gene97456:intron | 40.0% | |
| TGTTGGGAAAAAGTTGCTGA+GGG | + | 50665:12565-12584 | MS.gene97456:CDS | 40.0% | |
| TTAACCCTCCAGTTTATAGG+TGG | - | 50665:12469-12488 | MS.gene97456:intergenic | 40.0% | |
| TTTCTGGACCACCTATAAAC+TGG | + | 50665:12458-12477 | MS.gene97456:CDS | 40.0% | |
| ! | ATGTCTTTCACTTCTGGAAG+AGG | - | 50665:13179-13198 | MS.gene97456:intergenic | 40.0% |
| ! | TGACGTATCAGGTGTTACAT+AGG | - | 50665:12055-12074 | MS.gene97456:intergenic | 40.0% |
| ! | TGTTCCTTTTCCAACACTGT+TGG | - | 50665:12514-12533 | MS.gene97456:intergenic | 40.0% |
| ! | TTCTCTTTTCTCAACCTTGG+TGG | - | 50665:13257-13276 | MS.gene97456:intergenic | 40.0% |
| ! | TTGGAGTATTCAGCACTCAT+AGG | + | 50665:11728-11747 | MS.gene97456:CDS | 40.0% |
| !! | ATGGATATGAATGCTGGCTT+TGG | + | 50665:13392-13411 | MS.gene97456:CDS | 40.0% |
| AGGCCTCATAGGAACTTACA+TGG | + | 50665:13511-13530 | MS.gene97456:CDS | 45.0% | |
| ATGCCTTCAACATGAAGCGT+TGG | + | 50665:12027-12046 | MS.gene97456:intron | 45.0% | |
| ATTGACAGGATATTGCGTCC+TGG | + | 50665:12421-12440 | MS.gene97456:CDS | 45.0% | |
| CAAACACCGACACATGTTGA+AGG | - | 50665:11974-11993 | MS.gene97456:intergenic | 45.0% | |
| CGACTTCAAAGGGTCATACT+AGG | - | 50665:14250-14269 | MS.gene97456:intergenic | 45.0% | |
| CTGAATACTCCAAGCATAGC+AGG | - | 50665:11721-11740 | MS.gene97456:intergenic | 45.0% | |
| CTGACACGATATGTCGACAA+CGG | - | 50665:12177-12196 | MS.gene97456:intergenic | 45.0% | |
| GACACACCTTCAACATGTGT+CGG | + | 50665:11965-11984 | MS.gene97456:intron | 45.0% | |
| GATAGAATGAGATGGGAAGG+AGG | + | 50665:14618-14637 | MS.gene97456:CDS | 45.0% | |
| GTGTTGGGAAAAAGTTGCTG+AGG | + | 50665:12564-12583 | MS.gene97456:CDS | 45.0% | |
| TGGACCACCTATAAACTGGA+GGG | + | 50665:12462-12481 | MS.gene97456:CDS | 45.0% | |
| ! | AGAGCCAACAGTGTTGGAAA+AGG | + | 50665:12507-12526 | MS.gene97456:CDS | 45.0% |
| ! | CTTCAACATGTGTCGGTGTT+TGG | + | 50665:11972-11991 | MS.gene97456:intron | 45.0% |
| ! | CTTCATGTTGAAGGCATGTC+TGG | - | 50665:12024-12043 | MS.gene97456:intergenic | 45.0% |
| ! | GACACATGTTGAAGGTGTGT+CGG | - | 50665:11966-11985 | MS.gene97456:intergenic | 45.0% |
| !! | ATTGAAGGAGTGTCTGGTGT+CGG | + | 50665:12076-12095 | MS.gene97456:intron | 45.0% |
| !! | CGTCATATTGAAGGAGTGTC+TGG | + | 50665:12070-12089 | MS.gene97456:intron | 45.0% |
| !! | GATATGAATGCTGGCTTTGG+TGG | + | 50665:13395-13414 | MS.gene97456:CDS | 45.0% |
| !! | TATTAAAAACAATAAATTAA+GGG | + | 50665:13978-13997 | MS.gene97456:intron | 5.0% |
| AGAGGACTTCCTGCTATGCT+TGG | + | 50665:11709-11728 | MS.gene97456:CDS | 50.0% | |
| CAGTGTTGCGTCTGTGTTAG+TGG | - | 50665:11932-11951 | MS.gene97456:intergenic | 50.0% | |
| CATCGGATTCTTCGTCCAGA+AGG | + | 50665:14540-14559 | MS.gene97456:CDS | 50.0% | |
| CATCTGACTCTGATGCTGGA+TGG | + | 50665:12677-12696 | MS.gene97456:CDS | 50.0% | |
| CATTAGCAGTCCAAGGGACA+AGG | - | 50665:11801-11820 | MS.gene97456:intergenic | 50.0% | |
| CCATTTCTCAAGAACACCGC+CGG | - | 50665:13213-13232 | MS.gene97456:intergenic | 50.0% | |
| CTGGACCACCTATAAACTGG+AGG | + | 50665:12461-12480 | MS.gene97456:CDS | 50.0% | |
| CTTGTCCCTTGGACTGCTAA+TGG | + | 50665:11799-11818 | MS.gene97456:CDS | 50.0% | |
| GCAAACAGAGCCAACAGTGT+TGG | + | 50665:12501-12520 | MS.gene97456:CDS | 50.0% | |
| GCACCAACGCTTCATGTTGA+AGG | - | 50665:12033-12052 | MS.gene97456:intergenic | 50.0% | |
| GTCTGGTATCCGACACATGT+TGG | - | 50665:12007-12026 | MS.gene97456:intergenic | 50.0% | |
| TGGGAAAAAGTTGCTGAGGG+AGG | + | 50665:12568-12587 | MS.gene97456:CDS | 50.0% | |
| !! | GAAAGTACCCAAAATCCGCC+AGG | - | 50665:12442-12461 | MS.gene97456:intergenic | 50.0% |
| !! | GGCGGATTTTGGGTACTTTC+TGG | + | 50665:12442-12461 | MS.gene97456:CDS | 50.0% |
| !! | TGGTGGATTTGCAGCTGCAA+TGG | + | 50665:13412-13431 | MS.gene97456:CDS | 50.0% |
| !!! | ATTGCGTCCTGGCGGATTTT+GGG | + | 50665:12432-12451 | MS.gene97456:CDS | 50.0% |
| !!! | TATTGCGTCCTGGCGGATTT+TGG | + | 50665:12431-12450 | MS.gene97456:CDS | 50.0% |
| CCGGCGGTGTTCTTGAGAAA+TGG | + | 50665:13210-13229 | MS.gene97456:CDS | 55.0% | |
| GACAGGATATTGCGTCCTGG+CGG | + | 50665:12424-12443 | MS.gene97456:CDS | 55.0% | |
| GACATCGATGAAATCGCCGG+CGG | + | 50665:13194-13213 | MS.gene97456:CDS | 55.0% | |
| ! | GCTCTAGATGCCTTGTCCCT+TGG | + | 50665:11788-11807 | MS.gene97456:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50665 | gene | 11631 | 14719 | 11631 | ID=MS.gene97456 |
| 50665 | mRNA | 11631 | 14719 | 11631 | ID=MS.gene97456.t1;Parent=MS.gene97456 |
| 50665 | exon | 11631 | 11820 | 11631 | ID=MS.gene97456.t1.exon1;Parent=MS.gene97456.t1 |
| 50665 | CDS | 11631 | 11820 | 11631 | ID=cds.MS.gene97456.t1;Parent=MS.gene97456.t1 |
| 50665 | exon | 12401 | 12698 | 12401 | ID=MS.gene97456.t1.exon2;Parent=MS.gene97456.t1 |
| 50665 | CDS | 12401 | 12698 | 12401 | ID=cds.MS.gene97456.t1;Parent=MS.gene97456.t1 |
| 50665 | exon | 13148 | 13537 | 13148 | ID=MS.gene97456.t1.exon3;Parent=MS.gene97456.t1 |
| 50665 | CDS | 13148 | 13537 | 13148 | ID=cds.MS.gene97456.t1;Parent=MS.gene97456.t1 |
| 50665 | exon | 14305 | 14382 | 14305 | ID=MS.gene97456.t1.exon4;Parent=MS.gene97456.t1 |
| 50665 | CDS | 14305 | 14382 | 14305 | ID=cds.MS.gene97456.t1;Parent=MS.gene97456.t1 |
| 50665 | exon | 14509 | 14719 | 14509 | ID=MS.gene97456.t1.exon5;Parent=MS.gene97456.t1 |
| 50665 | CDS | 14509 | 14719 | 14509 | ID=cds.MS.gene97456.t1;Parent=MS.gene97456.t1 |
| Gene Sequence |
| Protein sequence |
