Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91159.t1 | XP_003621015.2 | 89.2 | 453 | 49 | 0 | 1 | 453 | 117 | 569 | 8.80E-242 | 845.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91159.t1 | Q9ZW75 | 53.2 | 455 | 204 | 4 | 1 | 455 | 166 | 611 | 3.3e-144 | 513.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91159.t1 | G7KWQ3 | 89.2 | 453 | 49 | 0 | 1 | 453 | 117 | 569 | 6.3e-242 | 845.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene91159 | 0.8299 | 3.97E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene91159 | 0.830504 | 2.83E-55 | -1.69E-46 |
| MS.gene049195 | MS.gene91159 | 0.813579 | 2.38E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene91159 | 0.813076 | 3.07E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene91159 | 0.83467 | 2.62E-56 | -1.69E-46 |
| MS.gene04933 | MS.gene91159 | 0.826673 | 2.38E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene91159 | 0.858049 | 1.08E-62 | -1.69E-46 |
| MS.gene049758 | MS.gene91159 | 0.825722 | 4.01E-54 | -1.69E-46 |
| MS.gene049910 | MS.gene91159 | 0.83789 | 3.98E-57 | -1.69E-46 |
| MS.gene049993 | MS.gene91159 | 0.868392 | 6.76E-66 | -1.69E-46 |
| MS.gene050168 | MS.gene91159 | 0.818178 | 2.25E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene91159 | 0.807384 | 5.19E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene91159 | 0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene91159 | 0.841925 | 3.53E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene91159 | -0.83265 | 8.37E-56 | -1.69E-46 |
| MS.gene050397 | MS.gene91159 | 0.835096 | 2.05E-56 | -1.69E-46 |
| MS.gene050406 | MS.gene91159 | 0.831429 | 1.68E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene91159 | -0.845077 | 5.08E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene91159 | 0.821796 | 3.34E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene91159 | 0.81925 | 1.28E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene91159 | 0.820732 | 5.87E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene91159 | 0.868083 | 8.50E-66 | -1.69E-46 |
| MS.gene050650 | MS.gene91159 | 0.820673 | 6.06E-53 | -1.69E-46 |
| MS.gene050820 | MS.gene91159 | 0.811488 | 6.83E-51 | -1.69E-46 |
| MS.gene051171 | MS.gene91159 | 0.850335 | 1.81E-60 | -1.69E-46 |
| MS.gene051208 | MS.gene91159 | 0.830469 | 2.89E-55 | -1.69E-46 |
| MS.gene051240 | MS.gene91159 | 0.838222 | 3.27E-57 | -1.69E-46 |
| MS.gene051242 | MS.gene91159 | 0.833692 | 4.61E-56 | -1.69E-46 |
| MS.gene051257 | MS.gene91159 | 0.825748 | 3.96E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene91159 | 0.84754 | 1.08E-59 | -1.69E-46 |
| MS.gene051582 | MS.gene91159 | 0.864647 | 1.05E-64 | -1.69E-46 |
| MS.gene051860 | MS.gene91159 | 0.851092 | 1.11E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene91159 | 0.861782 | 8.05E-64 | -1.69E-46 |
| MS.gene052011 | MS.gene91159 | -0.890264 | 1.15E-73 | -1.69E-46 |
| MS.gene052077 | MS.gene91159 | 0.848423 | 6.19E-60 | -1.69E-46 |
| MS.gene052078 | MS.gene91159 | 0.815146 | 1.07E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene91159 | 0.803715 | 3.05E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene91159 | 0.84268 | 2.23E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene91159 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene91159 | 0.813488 | 2.50E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene91159 | 0.853487 | 2.31E-61 | -1.69E-46 |
| MS.gene052255 | MS.gene91159 | 0.802261 | 6.10E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene91159 | 0.802198 | 6.29E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene91159 | 0.843501 | 1.35E-58 | -1.69E-46 |
| MS.gene052389 | MS.gene91159 | 0.816085 | 6.63E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene91159 | 0.800583 | 1.35E-48 | -1.69E-46 |
| MS.gene052589 | MS.gene91159 | 0.800098 | 1.69E-48 | -1.69E-46 |
| MS.gene052590 | MS.gene91159 | 0.816655 | 4.95E-52 | -1.69E-46 |
| MS.gene052600 | MS.gene91159 | 0.826246 | 3.01E-54 | -1.69E-46 |
| MS.gene053330 | MS.gene91159 | 0.865947 | 4.08E-65 | -1.69E-46 |
| MS.gene053836 | MS.gene91159 | 0.879371 | 1.32E-69 | -1.69E-46 |
| MS.gene053907 | MS.gene91159 | 0.822433 | 2.38E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene91159 | 0.84293 | 1.91E-58 | -1.69E-46 |
| MS.gene053971 | MS.gene91159 | 0.845921 | 3.00E-59 | -1.69E-46 |
| MS.gene054011 | MS.gene91159 | 0.807799 | 4.24E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene91159 | 0.804496 | 2.10E-49 | -1.69E-46 |
| MS.gene054102 | MS.gene91159 | 0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene05412 | MS.gene91159 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene05413 | MS.gene91159 | 0.801969 | 7.01E-49 | -1.69E-46 |
| MS.gene054173 | MS.gene91159 | 0.802572 | 5.26E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene91159 | 0.870659 | 1.23E-66 | -1.69E-46 |
| MS.gene054349 | MS.gene91159 | 0.822489 | 2.31E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene91159 | 0.855344 | 6.72E-62 | -1.69E-46 |
| MS.gene054719 | MS.gene91159 | 0.865527 | 5.53E-65 | -1.69E-46 |
| MS.gene054918 | MS.gene91159 | 0.821476 | 3.96E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene91159 | 0.814867 | 1.24E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene91159 | 0.846364 | 2.27E-59 | -1.69E-46 |
| MS.gene054983 | MS.gene91159 | 0.854666 | 1.06E-61 | -1.69E-46 |
| MS.gene055116 | MS.gene91159 | 0.818626 | 1.78E-52 | -1.69E-46 |
| MS.gene055217 | MS.gene91159 | 0.82736 | 1.63E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene91159 | 0.828343 | 9.48E-55 | -1.69E-46 |
| MS.gene055358 | MS.gene91159 | 0.812204 | 4.77E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene91159 | 0.803595 | 3.23E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene91159 | 0.825802 | 3.84E-54 | -1.69E-46 |
| MS.gene055428 | MS.gene91159 | 0.871 | 9.54E-67 | -1.69E-46 |
| MS.gene05553 | MS.gene91159 | 0.881605 | 2.09E-70 | -1.69E-46 |
| MS.gene055601 | MS.gene91159 | -0.80265 | 5.07E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene91159 | 0.832603 | 8.60E-56 | -1.69E-46 |
| MS.gene055712 | MS.gene91159 | 0.80239 | 5.74E-49 | -1.69E-46 |
| MS.gene055971 | MS.gene91159 | 0.800644 | 1.31E-48 | -1.69E-46 |
| MS.gene056087 | MS.gene91159 | 0.81368 | 2.26E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene91159 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene91159 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene056451 | MS.gene91159 | 0.856391 | 3.32E-62 | -1.69E-46 |
| MS.gene056612 | MS.gene91159 | 0.83114 | 1.98E-55 | -1.69E-46 |
| MS.gene056633 | MS.gene91159 | 0.814819 | 1.27E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene91159 | 0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene91159 | 0.837187 | 6.03E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene91159 | -0.84274 | 2.15E-58 | -1.69E-46 |
| MS.gene056979 | MS.gene91159 | 0.851078 | 1.12E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene91159 | 0.862574 | 4.60E-64 | -1.69E-46 |
| MS.gene057121 | MS.gene91159 | 0.860586 | 1.86E-63 | -1.69E-46 |
| MS.gene057245 | MS.gene91159 | 0.826626 | 2.45E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene91159 | 0.806189 | 9.28E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene91159 | 0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene91159 | 0.807298 | 5.41E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene91159 | 0.814984 | 1.17E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene91159 | 0.825451 | 4.65E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene91159 | 0.816801 | 4.59E-52 | -1.69E-46 |
| MS.gene057825 | MS.gene91159 | 0.811909 | 5.53E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene91159 | 0.874053 | 9.12E-68 | -1.69E-46 |
| MS.gene05811 | MS.gene91159 | 0.864595 | 1.09E-64 | -1.69E-46 |
| MS.gene058139 | MS.gene91159 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene91159 | 0.883212 | 5.43E-71 | -1.69E-46 |
| MS.gene058233 | MS.gene91159 | 0.850556 | 1.57E-60 | -1.69E-46 |
| MS.gene058276 | MS.gene91159 | 0.864477 | 1.18E-64 | -1.69E-46 |
| MS.gene058710 | MS.gene91159 | 0.846944 | 1.58E-59 | -1.69E-46 |
| MS.gene058746 | MS.gene91159 | 0.844441 | 7.55E-59 | -1.69E-46 |
| MS.gene058749 | MS.gene91159 | 0.813846 | 2.08E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene91159 | 0.80832 | 3.28E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene91159 | 0.848902 | 4.56E-60 | -1.69E-46 |
| MS.gene059011 | MS.gene91159 | 0.837253 | 5.80E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene91159 | 0.848225 | 7.02E-60 | -1.69E-46 |
| MS.gene059141 | MS.gene91159 | 0.803909 | 2.78E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene91159 | 0.87561 | 2.69E-68 | -1.69E-46 |
| MS.gene059285 | MS.gene91159 | 0.830618 | 2.65E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene91159 | 0.867589 | 1.22E-65 | -1.69E-46 |
| MS.gene059518 | MS.gene91159 | 0.833378 | 5.52E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene91159 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene059692 | MS.gene91159 | 0.803332 | 3.67E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene91159 | 0.862682 | 4.26E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene91159 | 0.854997 | 8.48E-62 | -1.69E-46 |
| MS.gene060247 | MS.gene91159 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene91159 | 0.810796 | 9.65E-51 | -1.69E-46 |
| MS.gene060403 | MS.gene91159 | 0.808335 | 3.26E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene91159 | 0.851169 | 1.06E-60 | -1.69E-46 |
| MS.gene060986 | MS.gene91159 | 0.818299 | 2.11E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene91159 | 0.879487 | 1.20E-69 | -1.69E-46 |
| MS.gene061114 | MS.gene91159 | -0.862495 | 4.87E-64 | -1.69E-46 |
| MS.gene061154 | MS.gene91159 | 0.803939 | 2.74E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene91159 | 0.826773 | 2.26E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55843 | MS.gene91159 | PPI |
| MS.gene91159 | MS.gene048977 | PPI |
| MS.gene91159 | MS.gene06124 | PPI |
| MS.gene91159 | MS.gene20195 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91159.t1 | MTR_7g006060 | 94.923 | 453 | 23 | 0 | 1 | 453 | 117 | 569 | 0.0 | 904 |
| MS.gene91159.t1 | MTR_7g076170 | 54.484 | 446 | 197 | 3 | 5 | 449 | 179 | 619 | 0.0 | 536 |
| MS.gene91159.t1 | MTR_0019s0120 | 56.047 | 430 | 181 | 4 | 5 | 432 | 183 | 606 | 0.0 | 523 |
| MS.gene91159.t1 | MTR_8g100075 | 52.135 | 445 | 207 | 3 | 5 | 449 | 176 | 614 | 0.0 | 522 |
| MS.gene91159.t1 | MTR_8g432680 | 51.902 | 447 | 208 | 4 | 5 | 449 | 183 | 624 | 0.0 | 520 |
| MS.gene91159.t1 | MTR_1g101370 | 53.580 | 433 | 198 | 2 | 1 | 432 | 167 | 597 | 3.58e-180 | 518 |
| MS.gene91159.t1 | MTR_8g055840 | 53.483 | 445 | 195 | 4 | 5 | 449 | 162 | 594 | 2.03e-173 | 500 |
| MS.gene91159.t1 | MTR_5g040360 | 51.461 | 445 | 203 | 4 | 5 | 449 | 162 | 593 | 1.48e-166 | 483 |
| MS.gene91159.t1 | MTR_4g098890 | 52.915 | 446 | 199 | 4 | 5 | 450 | 164 | 598 | 2.39e-165 | 506 |
| MS.gene91159.t1 | MTR_3g040370 | 51.389 | 432 | 197 | 4 | 1 | 432 | 159 | 577 | 1.14e-158 | 462 |
| MS.gene91159.t1 | MTR_0019s0120 | 55.028 | 358 | 153 | 4 | 5 | 360 | 183 | 534 | 1.94e-147 | 431 |
| MS.gene91159.t1 | MTR_5g026930 | 47.529 | 425 | 213 | 7 | 5 | 427 | 150 | 566 | 1.48e-137 | 408 |
| MS.gene91159.t1 | MTR_8g071280 | 47.786 | 429 | 208 | 8 | 5 | 428 | 148 | 565 | 4.70e-136 | 404 |
| MS.gene91159.t1 | MTR_7g076150 | 43.723 | 462 | 226 | 10 | 1 | 453 | 6 | 442 | 9.94e-130 | 383 |
| MS.gene91159.t1 | MTR_8g432620 | 44.545 | 440 | 213 | 9 | 1 | 431 | 162 | 579 | 1.04e-128 | 385 |
| MS.gene91159.t1 | MTR_7g076150 | 43.723 | 462 | 226 | 10 | 1 | 453 | 149 | 585 | 1.91e-127 | 382 |
| MS.gene91159.t1 | MTR_3g071530 | 44.573 | 433 | 213 | 10 | 1 | 427 | 218 | 629 | 1.08e-123 | 374 |
| MS.gene91159.t1 | MTR_1g069785 | 41.703 | 458 | 244 | 11 | 1 | 451 | 140 | 581 | 4.16e-119 | 360 |
| MS.gene91159.t1 | MTR_1g442840 | 44.495 | 436 | 217 | 12 | 1 | 428 | 57 | 475 | 7.96e-118 | 355 |
| MS.gene91159.t1 | MTR_5g080720 | 42.634 | 448 | 235 | 9 | 1 | 443 | 201 | 631 | 1.98e-117 | 358 |
| MS.gene91159.t1 | MTR_1g442840 | 44.495 | 436 | 217 | 12 | 1 | 428 | 170 | 588 | 1.74e-116 | 355 |
| MS.gene91159.t1 | MTR_1g075900 | 43.111 | 450 | 227 | 11 | 1 | 441 | 169 | 598 | 3.53e-116 | 354 |
| MS.gene91159.t1 | MTR_1g029730 | 44.295 | 447 | 221 | 11 | 1 | 440 | 218 | 643 | 1.28e-115 | 353 |
| MS.gene91159.t1 | MTR_3g096480 | 43.249 | 437 | 226 | 7 | 1 | 428 | 333 | 756 | 2.17e-115 | 357 |
| MS.gene91159.t1 | MTR_5g083150 | 42.334 | 437 | 221 | 11 | 1 | 427 | 166 | 581 | 3.13e-115 | 351 |
| MS.gene91159.t1 | MTR_3g068990 | 42.411 | 448 | 236 | 10 | 1 | 443 | 229 | 659 | 5.55e-115 | 352 |
| MS.gene91159.t1 | MTR_5g026930 | 47.486 | 358 | 178 | 7 | 5 | 360 | 150 | 499 | 6.71e-113 | 342 |
| MS.gene91159.t1 | MTR_3g088790 | 41.403 | 442 | 228 | 10 | 1 | 428 | 298 | 722 | 7.59e-108 | 336 |
| MS.gene91159.t1 | MTR_8g093880 | 40.848 | 448 | 241 | 9 | 1 | 438 | 363 | 796 | 2.70e-107 | 337 |
| MS.gene91159.t1 | MTR_5g080720 | 43.928 | 387 | 195 | 9 | 1 | 382 | 201 | 570 | 3.42e-104 | 322 |
| MS.gene91159.t1 | MTR_8g076650 | 39.954 | 433 | 242 | 6 | 1 | 428 | 451 | 870 | 1.31e-103 | 328 |
| MS.gene91159.t1 | MTR_5g021100 | 40.275 | 437 | 237 | 9 | 1 | 428 | 394 | 815 | 3.76e-101 | 321 |
| MS.gene91159.t1 | MTR_1g051055 | 39.863 | 439 | 230 | 10 | 1 | 428 | 164 | 579 | 1.64e-98 | 308 |
| MS.gene91159.t1 | MTR_1g022255 | 35.240 | 437 | 246 | 11 | 1 | 428 | 271 | 679 | 4.11e-81 | 265 |
| MS.gene91159.t1 | MTR_3g074780 | 35.666 | 443 | 233 | 14 | 29 | 440 | 257 | 678 | 7.33e-80 | 261 |
| MS.gene91159.t1 | MTR_5g064080 | 34.852 | 439 | 240 | 10 | 29 | 440 | 241 | 660 | 2.07e-78 | 257 |
| MS.gene91159.t1 | MTR_4g083030 | 34.396 | 439 | 229 | 13 | 29 | 443 | 191 | 594 | 7.79e-77 | 251 |
| MS.gene91159.t1 | MTR_1g022255 | 29.217 | 332 | 200 | 9 | 1 | 324 | 271 | 575 | 3.29e-41 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91159.t1 | AT2G43200 | 57.802 | 455 | 183 | 4 | 1 | 455 | 166 | 611 | 0.0 | 560 |
| MS.gene91159.t1 | AT2G43200 | 57.802 | 455 | 183 | 4 | 1 | 455 | 166 | 611 | 0.0 | 560 |
| MS.gene91159.t1 | AT4G10440 | 53.034 | 445 | 204 | 2 | 5 | 449 | 171 | 610 | 0.0 | 531 |
| MS.gene91159.t1 | AT1G33170 | 53.139 | 446 | 203 | 3 | 5 | 449 | 188 | 628 | 0.0 | 529 |
| MS.gene91159.t1 | AT4G00750 | 52.784 | 449 | 204 | 4 | 5 | 450 | 174 | 617 | 0.0 | 520 |
| MS.gene91159.t1 | AT1G26850 | 54.382 | 445 | 197 | 3 | 5 | 449 | 164 | 602 | 0.0 | 520 |
| MS.gene91159.t1 | AT1G26850 | 54.382 | 445 | 197 | 3 | 5 | 449 | 164 | 602 | 0.0 | 520 |
| MS.gene91159.t1 | AT2G45750 | 54.734 | 433 | 189 | 4 | 5 | 432 | 165 | 595 | 5.55e-180 | 518 |
| MS.gene91159.t1 | AT4G18030 | 49.333 | 450 | 216 | 5 | 1 | 449 | 159 | 597 | 8.01e-157 | 458 |
| MS.gene91159.t1 | AT4G19120 | 48.718 | 429 | 204 | 9 | 5 | 427 | 148 | 566 | 1.63e-140 | 416 |
| MS.gene91159.t1 | AT4G19120 | 48.718 | 429 | 204 | 9 | 5 | 427 | 148 | 566 | 1.63e-140 | 416 |
| MS.gene91159.t1 | AT1G31850 | 48.009 | 427 | 210 | 8 | 5 | 427 | 154 | 572 | 2.62e-139 | 412 |
| MS.gene91159.t1 | AT1G31850 | 48.009 | 427 | 210 | 8 | 5 | 427 | 154 | 572 | 2.62e-139 | 412 |
| MS.gene91159.t1 | AT1G31850 | 48.009 | 427 | 210 | 8 | 5 | 427 | 154 | 572 | 2.62e-139 | 412 |
| MS.gene91159.t1 | AT1G31850 | 48.009 | 427 | 210 | 8 | 5 | 427 | 154 | 572 | 2.62e-139 | 412 |
| MS.gene91159.t1 | AT1G26850 | 53.026 | 347 | 160 | 2 | 1 | 347 | 160 | 503 | 1.16e-135 | 400 |
| MS.gene91159.t1 | AT4G00740 | 43.074 | 462 | 229 | 12 | 1 | 453 | 155 | 591 | 3.15e-124 | 374 |
| MS.gene91159.t1 | AT4G00740 | 43.074 | 462 | 229 | 12 | 1 | 453 | 155 | 591 | 3.15e-124 | 374 |
| MS.gene91159.t1 | AT5G06050 | 43.973 | 448 | 229 | 9 | 1 | 443 | 225 | 655 | 3.61e-122 | 371 |
| MS.gene91159.t1 | AT2G39750 | 42.411 | 448 | 236 | 9 | 1 | 443 | 253 | 683 | 1.21e-118 | 362 |
| MS.gene91159.t1 | AT1G77260 | 42.411 | 448 | 236 | 9 | 1 | 443 | 217 | 647 | 1.21e-117 | 358 |
| MS.gene91159.t1 | AT2G40280 | 43.182 | 440 | 215 | 11 | 1 | 431 | 155 | 568 | 4.13e-117 | 355 |
| MS.gene91159.t1 | AT4G14360 | 44.495 | 436 | 217 | 12 | 1 | 428 | 154 | 572 | 7.48e-117 | 355 |
| MS.gene91159.t1 | AT4G14360 | 44.495 | 436 | 217 | 12 | 1 | 428 | 154 | 572 | 7.48e-117 | 355 |
| MS.gene91159.t1 | AT1G04430 | 44.568 | 451 | 220 | 12 | 1 | 442 | 162 | 591 | 2.69e-116 | 354 |
| MS.gene91159.t1 | AT1G04430 | 44.568 | 451 | 220 | 12 | 1 | 442 | 162 | 591 | 2.69e-116 | 354 |
| MS.gene91159.t1 | AT1G04430 | 44.568 | 451 | 220 | 12 | 1 | 442 | 162 | 591 | 2.69e-116 | 354 |
| MS.gene91159.t1 | AT4G19120 | 48.895 | 362 | 169 | 9 | 5 | 360 | 148 | 499 | 1.28e-114 | 346 |
| MS.gene91159.t1 | AT3G23300 | 42.013 | 457 | 240 | 12 | 1 | 449 | 157 | 596 | 2.39e-114 | 349 |
| MS.gene91159.t1 | AT3G23300 | 42.013 | 457 | 240 | 12 | 1 | 449 | 157 | 596 | 2.39e-114 | 349 |
| MS.gene91159.t1 | AT3G56080 | 41.419 | 437 | 230 | 10 | 1 | 431 | 179 | 595 | 5.44e-114 | 348 |
| MS.gene91159.t1 | AT5G64030 | 42.334 | 437 | 230 | 7 | 1 | 428 | 373 | 796 | 2.19e-113 | 352 |
| MS.gene91159.t1 | AT5G14430 | 45.287 | 435 | 215 | 10 | 1 | 428 | 158 | 576 | 7.49e-112 | 342 |
| MS.gene91159.t1 | AT5G14430 | 45.287 | 435 | 215 | 10 | 1 | 428 | 158 | 576 | 9.00e-112 | 342 |
| MS.gene91159.t1 | AT2G34300 | 41.242 | 451 | 234 | 10 | 1 | 438 | 315 | 747 | 3.49e-110 | 343 |
| MS.gene91159.t1 | AT2G34300 | 41.242 | 451 | 234 | 10 | 1 | 438 | 315 | 747 | 3.49e-110 | 343 |
| MS.gene91159.t1 | AT2G34300 | 41.242 | 451 | 234 | 10 | 1 | 438 | 315 | 747 | 3.49e-110 | 343 |
| MS.gene91159.t1 | AT1G29470 | 41.913 | 439 | 226 | 10 | 1 | 427 | 315 | 736 | 1.33e-108 | 338 |
| MS.gene91159.t1 | AT1G29470 | 41.913 | 439 | 226 | 10 | 1 | 427 | 315 | 736 | 1.33e-108 | 338 |
| MS.gene91159.t1 | AT5G04060 | 40.611 | 458 | 234 | 13 | 1 | 448 | 161 | 590 | 9.44e-105 | 324 |
| MS.gene91159.t1 | AT3G51070 | 39.954 | 438 | 239 | 8 | 1 | 428 | 446 | 869 | 5.44e-103 | 327 |
| MS.gene91159.t1 | AT3G10200 | 40.319 | 439 | 226 | 11 | 1 | 428 | 150 | 563 | 4.06e-101 | 314 |
| MS.gene91159.t1 | AT3G56080 | 42.894 | 387 | 195 | 10 | 1 | 381 | 179 | 545 | 4.07e-101 | 313 |
| MS.gene91159.t1 | AT3G10200 | 40.580 | 414 | 210 | 11 | 1 | 403 | 150 | 538 | 6.75e-94 | 296 |
| MS.gene91159.t1 | AT3G51070 | 41.432 | 391 | 205 | 8 | 1 | 381 | 446 | 822 | 3.99e-91 | 294 |
| MS.gene91159.t1 | AT1G19430 | 34.899 | 447 | 254 | 11 | 1 | 438 | 294 | 712 | 3.40e-81 | 265 |
| MS.gene91159.t1 | AT1G19430 | 34.899 | 447 | 254 | 11 | 1 | 438 | 294 | 712 | 3.40e-81 | 265 |
| MS.gene91159.t1 | AT1G78240 | 36.080 | 449 | 235 | 13 | 29 | 449 | 249 | 673 | 6.01e-80 | 261 |
| MS.gene91159.t1 | AT1G78240 | 36.080 | 449 | 235 | 13 | 29 | 449 | 249 | 673 | 6.01e-80 | 261 |
| MS.gene91159.t1 | AT1G13860 | 33.257 | 439 | 244 | 13 | 29 | 440 | 19 | 435 | 1.74e-77 | 248 |
| MS.gene91159.t1 | AT1G13860 | 33.257 | 439 | 244 | 13 | 29 | 440 | 175 | 591 | 1.00e-75 | 248 |
| MS.gene91159.t1 | AT1G13860 | 33.257 | 439 | 244 | 13 | 29 | 440 | 175 | 591 | 1.00e-75 | 248 |
| MS.gene91159.t1 | AT1G13860 | 33.257 | 439 | 244 | 13 | 29 | 440 | 175 | 591 | 1.00e-75 | 248 |
| MS.gene91159.t1 | AT1G13860 | 33.257 | 439 | 244 | 13 | 29 | 440 | 175 | 591 | 1.00e-75 | 248 |
| MS.gene91159.t1 | AT2G03480 | 32.184 | 435 | 230 | 10 | 29 | 440 | 191 | 583 | 3.08e-72 | 239 |
| MS.gene91159.t1 | AT2G03480 | 32.184 | 435 | 241 | 11 | 29 | 440 | 191 | 594 | 4.95e-70 | 233 |
| MS.gene91159.t1 | AT1G19430 | 30.699 | 329 | 193 | 9 | 1 | 321 | 294 | 595 | 8.46e-42 | 157 |
| MS.gene91159.t1 | AT2G03480 | 33.645 | 214 | 130 | 5 | 29 | 238 | 191 | 396 | 2.58e-34 | 133 |
Find 92 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGAACCATAATCATTTC+TGG | 0.166933 | 7.2:-92582817 | None:intergenic |
| GAAGCTTCTTCCTGTGAATT+TGG | 0.175630 | 7.2:+92574588 | MS.gene91159:CDS |
| TATTGCGTCCTGGTGGATTT+TGG | 0.196604 | 7.2:+92580797 | MS.gene91159:CDS |
| CTTCCTGTGAATTTGGAGTC+TGG | 0.252938 | 7.2:+92574595 | MS.gene91159:CDS |
| CCCTTCAAAATCATTTGATA+TGG | 0.266363 | 7.2:+92575554 | MS.gene91159:CDS |
| TAGTTAACCCTCCAGTTTAT+AGG | 0.271919 | 7.2:-92580835 | None:intergenic |
| TCATCGATGTCTTTCACTTC+TGG | 0.275668 | 7.2:-92581332 | None:intergenic |
| TTCTCGCCCAGAAATGATTA+TGG | 0.315884 | 7.2:+92582810 | MS.gene91159:CDS |
| AAACCTATAGTGAAGATAAT+AGG | 0.330407 | 7.2:+92581447 | MS.gene91159:CDS |
| GGTGAATCATTCAATCTTAT+AGG | 0.330952 | 7.2:-92581383 | None:intergenic |
| TATCCTATTATCTTCACTAT+AGG | 0.342075 | 7.2:-92581450 | None:intergenic |
| TTCCTGTGAATTTGGAGTCT+GGG | 0.359094 | 7.2:+92574596 | MS.gene91159:CDS |
| TCAGATGAATTGCAAAACTT+TGG | 0.372469 | 7.2:-92581027 | None:intergenic |
| CAATGGTGGAATATCCAGTT+TGG | 0.376904 | 7.2:+92581579 | MS.gene91159:CDS |
| TATGACTTGATACATGCTTA+TGG | 0.378779 | 7.2:+92582472 | MS.gene91159:CDS |
| CTAATAATAACAGTTCCTTC+TGG | 0.382335 | 7.2:-92582691 | None:intergenic |
| ACAACATTCATAACCCAAAC+TGG | 0.384154 | 7.2:-92581593 | None:intergenic |
| TGTTCTTGGGTAAGTTGAAA+AGG | 0.390698 | 7.2:-92582449 | None:intergenic |
| ATTTATGAAAGAGGCCTCAT+AGG | 0.392033 | 7.2:+92581650 | MS.gene91159:CDS |
| ATAGTGAAGATAATAGGATA+TGG | 0.398371 | 7.2:+92581453 | MS.gene91159:CDS |
| TTTCTGGACCACCTATAAAC+TGG | 0.402233 | 7.2:+92580824 | MS.gene91159:CDS |
| TGGTAAATATAGAAATGTTA+TGG | 0.402597 | 7.2:+92581523 | MS.gene91159:CDS |
| TGTATCAAGTCATATGTTCT+TGG | 0.405750 | 7.2:-92582463 | None:intergenic |
| ATGGATATGAATGCTGGCTT+TGG | 0.406035 | 7.2:+92581542 | MS.gene91159:CDS |
| TAATTGAAGGTAGCAAGCTT+TGG | 0.406799 | 7.2:+92575396 | MS.gene91159:intron |
| GCTCTAGATGCCTTGTCCCT+TGG | 0.411319 | 7.2:+92575583 | MS.gene91159:CDS |
| ATTAGAACTGTTCTTGATGT+TGG | 0.413977 | 7.2:+92574622 | MS.gene91159:CDS |
| TGTCAATATACATACTGAAT+AGG | 0.421085 | 7.2:-92582495 | None:intergenic |
| CTTGGCATTATTTATGAAAG+AGG | 0.422782 | 7.2:+92581641 | MS.gene91159:CDS |
| TGAGAACCATAATCATTTCT+GGG | 0.424182 | 7.2:-92582816 | None:intergenic |
| AGGGAGGACAAATTGCTATA+TGG | 0.430166 | 7.2:+92580950 | MS.gene91159:CDS |
| CTTGTCCCTTGGACTGCTAA+TGG | 0.434823 | 7.2:+92575594 | MS.gene91159:CDS |
| CCGGCGGTGTTCTTGAGAAA+TGG | 0.435372 | 7.2:+92581360 | MS.gene91159:CDS |
| GATATGAATGCTGGCTTTGG+TGG | 0.443506 | 7.2:+92581545 | MS.gene91159:CDS |
| ACATAACCCTTTACACCATC+AGG | 0.447571 | 7.2:-92574553 | None:intergenic |
| ATGTCTTTCACTTCTGGAAG+AGG | 0.457490 | 7.2:-92581326 | None:intergenic |
| AATAACAGATAGAATGAGAT+GGG | 0.458438 | 7.2:+92582747 | MS.gene91159:CDS |
| AATTCATCTGATTCTGATGC+TGG | 0.458877 | 7.2:+92581039 | MS.gene91159:CDS |
| AGCAAAATGAATTTACTACT+TGG | 0.459844 | 7.2:-92582848 | None:intergenic |
| ATGCTCAAATCACTCTCATC+TGG | 0.459974 | 7.2:+92581503 | MS.gene91159:CDS |
| TTGGAGTATTCAGCACTCAT+AGG | 0.463802 | 7.2:+92575523 | MS.gene91159:CDS |
| TATACCTAAAAGAGATTGAC+AGG | 0.464641 | 7.2:+92580773 | MS.gene91159:CDS |
| TTGAGAAAAGAGAATGATGA+TGG | 0.465341 | 7.2:+92581413 | MS.gene91159:CDS |
| AATGGTGGAATATCCAGTTT+GGG | 0.469487 | 7.2:+92581580 | MS.gene91159:CDS |
| GTATCAAGTCATATGTTCTT+GGG | 0.478299 | 7.2:-92582462 | None:intergenic |
| GTGATGTTTGCACTTGAAAG+AGG | 0.484883 | 7.2:+92575486 | MS.gene91159:CDS |
| ACTGTTCTTGATGTTGGATG+TGG | 0.485077 | 7.2:+92574628 | MS.gene91159:CDS |
| TGGTGGATTTGCAGCTGCAA+TGG | 0.488218 | 7.2:+92581562 | MS.gene91159:CDS |
| AAAGGAACAGAACAGTTTAG+AGG | 0.493506 | 7.2:+92580891 | MS.gene91159:CDS |
| GTTCTTGGGTAAGTTGAAAA+GGG | 0.494722 | 7.2:-92582448 | None:intergenic |
| AAAAGTCACAGAATTGGATA+AGG | 0.502761 | 7.2:+92574485 | MS.gene91159:CDS |
| AGAGGACTTCCTGCTATGCT+TGG | 0.504822 | 7.2:+92575504 | MS.gene91159:CDS |
| TCATAGGAACTTACATGGAT+TGG | 0.511002 | 7.2:+92581666 | MS.gene91159:CDS |
| GTCACAGAATTGGATAAGGT+TGG | 0.515335 | 7.2:+92574489 | MS.gene91159:CDS |
| AAGCTTTGGATCAGCTATGA+TGG | 0.521435 | 7.2:+92575410 | MS.gene91159:CDS |
| CTGAATACTCCAAGCATAGC+AGG | 0.524451 | 7.2:-92575513 | None:intergenic |
| ACAGATAGAATGAGATGGGA+AGG | 0.525765 | 7.2:+92582751 | MS.gene91159:CDS |
| GATAGAATGAGATGGGAAGG+AGG | 0.526208 | 7.2:+92582754 | MS.gene91159:CDS |
| AGAGCCAACAGTGTTGGAAA+AGG | 0.527030 | 7.2:+92580873 | MS.gene91159:CDS |
| TGAGCATCATGTTCATCACT+TGG | 0.541880 | 7.2:-92575462 | None:intergenic |
| CTCCCAGACTCCAAATTCAC+AGG | 0.544163 | 7.2:-92574598 | None:intergenic |
| AACTTGCAATGCAAATGTGT+TGG | 0.549154 | 7.2:+92580914 | MS.gene91159:CDS |
| AAATAACAGATAGAATGAGA+TGG | 0.551015 | 7.2:+92582746 | MS.gene91159:CDS |
| CTGTGAATTTGGAGTCTGGG+AGG | 0.554896 | 7.2:+92574599 | MS.gene91159:CDS |
| GCAAACAGAGCCAACAGTGT+TGG | 0.557287 | 7.2:+92580867 | MS.gene91159:CDS |
| AATTTACCATTAGCAGTCCA+AGG | 0.558982 | 7.2:-92575600 | None:intergenic |
| CAGAATTGGATAAGGTTGGT+TGG | 0.561187 | 7.2:+92574493 | MS.gene91159:CDS |
| ATATTGTTATTGAGATGCAT+CGG | 0.562461 | 7.2:+92582659 | MS.gene91159:CDS |
| AGGCCTCATAGGAACTTACA+TGG | 0.568438 | 7.2:+92581661 | MS.gene91159:CDS |
| CTGTTCTTGATGTTGGATGT+GGG | 0.573901 | 7.2:+92574629 | MS.gene91159:CDS |
| AATGTTATGGATATGAATGC+TGG | 0.574824 | 7.2:+92581536 | MS.gene91159:CDS |
| CATCGGATTCTTCGTCCAGA+AGG | 0.581866 | 7.2:+92582676 | MS.gene91159:CDS |
| CACCACCAGGAAACACAAAA+CGG | 0.582482 | 7.2:-92574519 | None:intergenic |
| AATCCATGTAAGTTCCTATG+AGG | 0.584131 | 7.2:-92581664 | None:intergenic |
| CATTAGCAGTCCAAGGGACA+AGG | 0.591170 | 7.2:-92575593 | None:intergenic |
| AGGAGGAATAGTAGTAGTTG+CGG | 0.594680 | 7.2:+92582771 | MS.gene91159:CDS |
| TGGATTTGCAGCTGCAATGG+TGG | 0.596525 | 7.2:+92581565 | MS.gene91159:CDS |
| CCATTTCTCAAGAACACCGC+CGG | 0.608620 | 7.2:-92581360 | None:intergenic |
| CTGGACCACCTATAAACTGG+AGG | 0.610529 | 7.2:+92580827 | MS.gene91159:CDS |
| CATCTGATTCTGATGCTGGA+TGG | 0.614125 | 7.2:+92581043 | MS.gene91159:CDS |
| ATTTACCATTAGCAGTCCAA+GGG | 0.620327 | 7.2:-92575599 | None:intergenic |
| ATTGACAGGATATTGCGTCC+TGG | 0.629408 | 7.2:+92580787 | MS.gene91159:CDS |
| AAAGACATCGATGAAATCGC+CGG | 0.630243 | 7.2:+92581341 | MS.gene91159:CDS |
| TTAACCCTCCAGTTTATAGG+TGG | 0.632189 | 7.2:-92580832 | None:intergenic |
| GGAGGGTTAACTATAAAGCA+TGG | 0.632607 | 7.2:+92580845 | MS.gene91159:CDS |
| TGGACCACCTATAAACTGGA+GGG | 0.642876 | 7.2:+92580828 | MS.gene91159:CDS |
| GACAGGATATTGCGTCCTGG+TGG | 0.647190 | 7.2:+92580790 | MS.gene91159:CDS |
| GGAAAAGAAGTACCACCACC+AGG | 0.648807 | 7.2:-92574532 | None:intergenic |
| TGTTCTTGATGTTGGATGTG+GGG | 0.648977 | 7.2:+92574630 | MS.gene91159:CDS |
| GAAAGTACCCAAAATCCACC+AGG | 0.676473 | 7.2:-92580805 | None:intergenic |
| GATTGAATGATTCACCACCA+AGG | 0.701587 | 7.2:+92581390 | MS.gene91159:CDS |
| GACATCGATGAAATCGCCGG+CGG | 0.750790 | 7.2:+92581344 | MS.gene91159:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 92574472 | 92582855 | 92574472 | ID=MS.gene91159 |
| chr7.2 | mRNA | 92574472 | 92582855 | 92574472 | ID=MS.gene91159.t1;Parent=MS.gene91159 |
| chr7.2 | exon | 92574472 | 92574651 | 92574472 | ID=MS.gene91159.t1.exon1;Parent=MS.gene91159.t1 |
| chr7.2 | CDS | 92574472 | 92574651 | 92574472 | ID=cds.MS.gene91159.t1;Parent=MS.gene91159.t1 |
| chr7.2 | exon | 92575405 | 92575615 | 92575405 | ID=MS.gene91159.t1.exon2;Parent=MS.gene91159.t1 |
| chr7.2 | CDS | 92575405 | 92575615 | 92575405 | ID=cds.MS.gene91159.t1;Parent=MS.gene91159.t1 |
| chr7.2 | exon | 92580767 | 92581064 | 92580767 | ID=MS.gene91159.t1.exon3;Parent=MS.gene91159.t1 |
| chr7.2 | CDS | 92580767 | 92581064 | 92580767 | ID=cds.MS.gene91159.t1;Parent=MS.gene91159.t1 |
| chr7.2 | exon | 92581298 | 92581687 | 92581298 | ID=MS.gene91159.t1.exon4;Parent=MS.gene91159.t1 |
| chr7.2 | CDS | 92581298 | 92581687 | 92581298 | ID=cds.MS.gene91159.t1;Parent=MS.gene91159.t1 |
| chr7.2 | exon | 92582441 | 92582518 | 92582441 | ID=MS.gene91159.t1.exon5;Parent=MS.gene91159.t1 |
| chr7.2 | CDS | 92582441 | 92582518 | 92582441 | ID=cds.MS.gene91159.t1;Parent=MS.gene91159.t1 |
| chr7.2 | exon | 92582645 | 92582855 | 92582645 | ID=MS.gene91159.t1.exon6;Parent=MS.gene91159.t1 |
| chr7.2 | CDS | 92582645 | 92582855 | 92582645 | ID=cds.MS.gene91159.t1;Parent=MS.gene91159.t1 |
| Gene Sequence |
| Protein sequence |
