AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27640.t1 MTR_7g076150 97.963 589 12 0 1 589 1 589 0.0 1208
MS.gene27640.t1 MTR_8g432620 78.347 605 112 3 1 589 1 602 0.0 967
MS.gene27640.t1 MTR_7g076150 97.758 446 10 0 144 589 1 446 0.0 910
MS.gene27640.t1 MTR_8g100075 45.591 533 264 8 73 587 96 620 6.25e-170 497
MS.gene27640.t1 MTR_1g101370 40.843 617 327 10 2 587 8 617 3.12e-168 493
MS.gene27640.t1 MTR_7g076170 46.415 530 256 9 78 587 104 625 3.30e-165 485
MS.gene27640.t1 MTR_8g055840 45.203 542 269 8 62 587 71 600 6.17e-165 484
MS.gene27640.t1 MTR_8g432680 44.991 529 266 7 78 587 108 630 1.21e-164 484
MS.gene27640.t1 MTR_5g040360 44.465 542 272 8 62 587 71 599 9.53e-163 478
MS.gene27640.t1 MTR_0019s0120 43.750 528 270 7 78 587 108 626 5.42e-161 474
MS.gene27640.t1 MTR_4g098890 45.946 555 259 12 54 586 67 602 8.25e-158 491
MS.gene27640.t1 MTR_8g071280 43.454 527 270 8 78 587 73 588 1.84e-155 459
MS.gene27640.t1 MTR_7g006060 43.470 536 269 10 75 585 43 569 1.55e-153 453
MS.gene27640.t1 MTR_3g040370 43.691 531 267 8 73 587 83 597 4.77e-151 448
MS.gene27640.t1 MTR_5g026930 43.503 531 274 9 74 588 71 591 2.75e-147 438
MS.gene27640.t1 MTR_5g080720 41.772 553 293 11 50 586 100 639 8.87e-147 438
MS.gene27640.t1 MTR_1g442840 40.669 568 308 9 42 587 55 615 2.31e-145 434
MS.gene27640.t1 MTR_1g442840 43.912 501 259 8 101 587 10 502 3.05e-145 430
MS.gene27640.t1 MTR_1g069785 38.648 577 328 9 29 587 17 585 1.93e-143 428
MS.gene27640.t1 MTR_3g096480 41.468 545 283 12 65 588 248 777 4.10e-143 433
MS.gene27640.t1 MTR_1g075900 41.296 540 292 9 66 587 82 614 8.61e-141 422
MS.gene27640.t1 MTR_5g083150 41.811 519 270 11 83 588 100 599 1.15e-140 421
MS.gene27640.t1 MTR_8g093880 41.667 528 267 14 84 588 298 807 2.17e-139 425
MS.gene27640.t1 MTR_3g088790 41.431 531 273 14 80 588 229 743 3.91e-139 422
MS.gene27640.t1 MTR_3g068990 42.155 529 279 11 73 586 151 667 1.24e-136 413
MS.gene27640.t1 MTR_5g021100 41.603 524 271 12 83 588 328 834 1.50e-136 418
MS.gene27640.t1 MTR_3g071530 40.561 535 288 8 63 588 134 647 9.95e-136 410
MS.gene27640.t1 MTR_1g051055 40.189 530 292 9 75 589 86 605 7.68e-135 406
MS.gene27640.t1 MTR_8g076650 41.731 520 275 9 83 588 386 891 3.65e-134 413
MS.gene27640.t1 MTR_1g029730 41.040 519 277 11 83 584 150 656 3.86e-130 396
MS.gene27640.t1 MTR_0019s0120 43.256 430 223 6 78 489 108 534 7.22e-128 386
MS.gene27640.t1 MTR_5g080720 42.500 480 253 10 50 513 100 572 1.77e-127 386
MS.gene27640.t1 MTR_5g026930 44.186 430 225 6 74 489 71 499 5.01e-121 367
MS.gene27640.t1 MTR_5g064080 33.092 553 324 12 65 588 136 671 2.33e-97 311
MS.gene27640.t1 MTR_4g083030 31.886 599 367 13 17 588 21 605 1.22e-93 300
MS.gene27640.t1 MTR_3g074780 32.605 549 326 14 73 588 152 689 1.34e-90 294
MS.gene27640.t1 MTR_1g022255 33.843 523 303 15 81 588 206 700 5.72e-89 290
MS.gene27640.t1 MTR_1g022255 29.752 363 229 10 104 454 227 575 3.43e-46 172
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27640.t1 AT4G00740 72.483 596 156 2 1 589 1 595 0.0 937
MS.gene27640.t1 AT4G00740 72.483 596 156 2 1 589 1 595 0.0 937
MS.gene27640.t1 AT4G00750 45.810 537 259 7 74 587 95 622 1.08e-166 489
MS.gene27640.t1 AT4G10440 44.404 545 274 9 63 587 81 616 4.39e-166 487
MS.gene27640.t1 AT1G33170 43.088 557 289 8 50 587 87 634 3.40e-164 483
MS.gene27640.t1 AT2G45750 44.527 539 269 8 74 589 86 617 9.11e-163 479
MS.gene27640.t1 AT1G31850 41.864 590 306 11 25 587 17 596 6.29e-161 473
MS.gene27640.t1 AT1G31850 41.864 590 306 11 25 587 17 596 6.29e-161 473
MS.gene27640.t1 AT1G31850 41.864 590 306 11 25 587 17 596 6.29e-161 473
MS.gene27640.t1 AT1G31850 41.864 590 306 11 25 587 17 596 6.29e-161 473
MS.gene27640.t1 AT1G26850 45.047 535 264 10 73 587 84 608 1.73e-159 470
MS.gene27640.t1 AT1G26850 45.047 535 264 10 73 587 84 608 1.73e-159 470
MS.gene27640.t1 AT4G19120 43.962 530 273 8 74 587 69 590 1.48e-158 467
MS.gene27640.t1 AT4G19120 43.962 530 273 8 74 587 69 590 1.48e-158 467
MS.gene27640.t1 AT4G18030 45.386 531 262 9 74 587 84 603 3.29e-157 464
MS.gene27640.t1 AT2G43200 43.429 525 273 9 78 586 94 610 6.95e-151 447
MS.gene27640.t1 AT2G43200 43.429 525 273 9 78 586 94 610 6.95e-151 447
MS.gene27640.t1 AT3G23300 41.989 543 288 9 65 587 66 601 5.60e-147 437
MS.gene27640.t1 AT3G23300 41.989 543 288 9 65 587 66 601 5.60e-147 437
MS.gene27640.t1 AT4G14360 43.676 506 263 7 73 563 74 572 3.16e-145 433
MS.gene27640.t1 AT4G14360 43.676 506 263 7 73 563 74 572 3.16e-145 433
MS.gene27640.t1 AT1G04430 37.851 605 331 9 22 587 15 613 2.70e-144 431
MS.gene27640.t1 AT1G04430 37.851 605 331 9 22 587 15 613 2.70e-144 431
MS.gene27640.t1 AT1G04430 37.851 605 331 9 22 587 15 613 2.70e-144 431
MS.gene27640.t1 AT2G34300 43.074 527 260 14 84 588 250 758 4.30e-143 433
MS.gene27640.t1 AT2G34300 43.074 527 260 14 84 588 250 758 4.30e-143 433
MS.gene27640.t1 AT2G34300 43.074 527 260 14 84 588 250 758 4.30e-143 433
MS.gene27640.t1 AT5G64030 42.803 528 261 13 84 588 308 817 5.37e-142 432
MS.gene27640.t1 AT1G29470 42.125 527 265 12 84 588 250 758 2.45e-140 426
MS.gene27640.t1 AT1G29470 42.125 527 265 12 84 588 250 758 2.45e-140 426
MS.gene27640.t1 AT2G39750 40.789 532 282 13 73 586 175 691 5.62e-137 415
MS.gene27640.t1 AT5G06050 40.530 528 285 11 73 584 147 661 1.11e-136 414
MS.gene27640.t1 AT1G77260 40.038 532 284 13 73 586 141 655 1.58e-136 412
MS.gene27640.t1 AT3G10200 41.026 546 289 11 60 589 62 590 5.66e-136 409
MS.gene27640.t1 AT3G51070 39.894 564 303 12 46 588 342 890 9.39e-134 412
MS.gene27640.t1 AT2G40280 40.000 560 288 16 46 588 54 582 1.14e-133 403
MS.gene27640.t1 AT5G14430 41.091 550 300 8 58 589 63 606 3.23e-133 402
MS.gene27640.t1 AT5G04060 39.338 544 299 9 60 589 73 599 8.14e-132 398
MS.gene27640.t1 AT3G56080 41.313 518 269 13 84 588 114 609 1.71e-131 398
MS.gene27640.t1 AT4G19120 44.907 432 221 5 74 489 69 499 2.13e-131 394
MS.gene27640.t1 AT5G14430 40.727 550 302 8 58 589 63 606 3.68e-131 397
MS.gene27640.t1 AT3G10200 42.596 493 253 9 60 538 62 538 9.85e-128 388
MS.gene27640.t1 AT3G51070 40.900 489 263 10 46 513 342 825 5.42e-120 375
MS.gene27640.t1 AT1G26850 44.928 414 205 8 73 467 84 493 6.77e-119 362
MS.gene27640.t1 AT3G56080 43.119 436 227 11 84 506 114 541 4.32e-117 358
MS.gene27640.t1 AT1G19430 35.000 520 302 12 81 588 228 723 1.01e-95 308
MS.gene27640.t1 AT1G19430 35.000 520 302 12 81 588 228 723 1.01e-95 308
MS.gene27640.t1 AT1G78240 33.396 533 320 12 73 576 144 670 1.27e-92 299
MS.gene27640.t1 AT1G78240 33.396 533 320 12 73 576 144 670 1.27e-92 299
MS.gene27640.t1 AT1G13860 32.370 519 298 11 106 588 101 602 2.69e-87 283
MS.gene27640.t1 AT1G13860 32.370 519 298 11 106 588 101 602 2.69e-87 283
MS.gene27640.t1 AT1G13860 32.370 519 298 11 106 588 101 602 2.69e-87 283
MS.gene27640.t1 AT1G13860 32.370 519 298 11 106 588 101 602 2.69e-87 283
MS.gene27640.t1 AT2G03480 30.839 548 310 11 73 588 84 594 3.59e-84 275
MS.gene27640.t1 AT2G03480 31.009 545 324 12 73 588 84 605 3.33e-82 270
MS.gene27640.t1 AT1G13860 32.538 461 265 9 159 588 1 446 1.62e-77 253
MS.gene27640.t1 AT1G19430 31.937 382 235 9 81 451 228 595 2.71e-54 194
MS.gene27640.t1 AT2G03480 28.750 320 211 5 73 377 84 401 4.16e-44 163

Find 179 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAGAACACCTCCATTTA+TGG 0.152108 7.2:-29659272 None:intergenic
AGACTTCCATTTCCTGCTTT+TGG 0.176323 7.2:+29659553 MS.gene27640:CDS
CACACCTTATGCATGCTTTC+AGG 0.213467 7.2:-29657337 None:intergenic
GAGAAAGAGTAATGAGAAAA+AGG 0.217310 7.2:-29657017 None:intergenic
TTACTTCAGGTTGCTAGTTT+TGG 0.217337 7.2:+29659406 MS.gene27640:intron
ATTGAGGAAGGGATGTTAAA+TGG 0.234055 7.2:+29657133 MS.gene27640:CDS
ATCTTTGACAGAGGACTTAT+TGG 0.248824 7.2:+29660448 MS.gene27640:CDS
CTTGAATTATGTGATGATTC+TGG 0.250630 7.2:+29659936 MS.gene27640:CDS
ATGGACATGAATGCATTATA+TGG 0.268695 7.2:+29660343 MS.gene27640:CDS
GTTCGAGGGTATGTTGAAAA+AGG 0.289047 7.2:-29660964 None:intergenic
AGTCAATACATTCCCATAAA+TGG 0.293619 7.2:+29659259 MS.gene27640:CDS
TCCTGTTCGGTGGGCTAAAC+AGG 0.305359 7.2:+29659782 MS.gene27640:CDS
GTCAGGTTCTTTATCATAAA+TGG 0.310121 7.2:-29661783 None:intergenic
GCCTAATGGGTATCGGGTTC+CGG 0.340054 7.2:+29657306 MS.gene27640:CDS
CCTGTCAGCAATCTTGTTGT+GGG 0.348589 7.2:-29659134 None:intergenic
TTGACTTGGTTCATTGTTCT+CGG 0.348912 7.2:+29659578 MS.gene27640:CDS
GTAGAGAGATGAATTACTAT+AGG 0.350347 7.2:+29657233 MS.gene27640:CDS
CCTTGGTCGCCGCCGTGTGC+TGG 0.360888 7.2:+29657063 MS.gene27640:CDS
CTTCCTAATGGAAATGAGTT+TGG 0.361568 7.2:+29659912 MS.gene27640:CDS
TAGAGAGATGAATTACTATA+GGG 0.363989 7.2:+29657234 MS.gene27640:CDS
GTTTGATTCCACCGCCTAAT+GGG 0.364461 7.2:+29657293 MS.gene27640:CDS
GGAGAGACATTGTCCTTTGC+CGG 0.366173 7.2:+29657255 MS.gene27640:CDS
ATGTAATATTGTTGATTTGA+TGG 0.368215 7.2:+29661652 MS.gene27640:CDS
TCCATAACGTTGCGTATTGA+TGG 0.372172 7.2:-29660325 None:intergenic
TGTTTGATTCCACCGCCTAA+TGG 0.375674 7.2:+29657292 MS.gene27640:CDS
GCTACTTTGTCAATTACTTC+GGG 0.378208 7.2:-29661728 None:intergenic
ATATGATCCACCTCACTTGC+AGG 0.378217 7.2:-29657175 None:intergenic
ATATATTGTTCTGCTCCATC+TGG 0.387453 7.2:-29659226 None:intergenic
CGCTACTTTGTCAATTACTT+CGG 0.388361 7.2:-29661729 None:intergenic
AGACCAAACTCATTTCCATT+AGG 0.395331 7.2:-29659915 None:intergenic
ATCAAAGGAGATTATGCTAT+TGG 0.396451 7.2:+29660151 MS.gene27640:CDS
TCCTGTCAGCAATCTTGTTG+TGG 0.396608 7.2:-29659135 None:intergenic
TTGAATTATGTGATGATTCT+GGG 0.400181 7.2:+29659937 MS.gene27640:CDS
TCCTGTTTAGCCCACCGAAC+AGG 0.405950 7.2:-29659783 None:intergenic
AATTCACTAAATATAAAGTT+GGG 0.410505 7.2:+29660298 MS.gene27640:CDS
TCCATCAATACGCAACGTTA+TGG 0.412610 7.2:+29660324 MS.gene27640:CDS
TCAAATCCAAAAGCAGGAAA+TGG 0.413279 7.2:-29659559 None:intergenic
TACATGAAAACACTGCAATC+TGG 0.414035 7.2:+29659865 MS.gene27640:CDS
CTCAGAACACCTCCATTTAT+GGG 0.417404 7.2:-29659271 None:intergenic
GCAGATTCGTGTCTTCCTAA+TGG 0.418281 7.2:+29659900 MS.gene27640:CDS
CCGTCTTGTGGTGGCTATTG+AGG 0.420421 7.2:+29657117 MS.gene27640:CDS
TTGAGGAAGGGATGTTAAAT+GGG 0.428861 7.2:+29657134 MS.gene27640:CDS
TGCAACTTATTTCATTGAAG+TGG 0.430659 7.2:+29659716 MS.gene27640:CDS
GGTGCGGCAGTTAGCCTCTC+TGG 0.433582 7.2:-29660190 None:intergenic
TGCTGACAGGAAAGGTCACC+AGG 0.435156 7.2:+29659147 MS.gene27640:CDS
TTCCACCGCCTAATGGGTAT+CGG 0.445816 7.2:+29657299 MS.gene27640:CDS
AAATTTACCAAGCTTGACTT+AGG 0.450311 7.2:-29659962 None:intergenic
TGGACATGAATGCATTATAT+GGG 0.450687 7.2:+29660344 MS.gene27640:CDS
TGCGATTTATGTGAATCTCT+TGG 0.452077 7.2:-29659472 None:intergenic
ATCGCAGATACAATTTGCCT+TGG 0.452382 7.2:+29659489 MS.gene27640:CDS
AGTTAGCCTCTCTGGCCACT+TGG 0.453186 7.2:-29660182 None:intergenic
CGTGTGTTGGTGCGTTTCCA+TGG 0.459289 7.2:-29656962 None:intergenic
TGCCTTGGAAAGAGGAATAC+CGG 0.462056 7.2:+29659504 MS.gene27640:CDS
GAATTCACTAAATATAAAGT+TGG 0.462143 7.2:+29660297 MS.gene27640:CDS
AACTTACTGTAGGCTGTAAA+CGG 0.470172 7.2:-29659610 None:intergenic
CCAGCACACGGCGGCGACCA+AGG 0.472017 7.2:-29657063 None:intergenic
TTAGAGCTTCCATAAGGTCT+TGG 0.472115 7.2:-29661837 None:intergenic
GGCTAACTGCCGCACCTTCG+AGG 0.477419 7.2:+29660197 MS.gene27640:CDS
TCATCTCCGGTCCTCCTGTT+CGG 0.477553 7.2:+29659769 MS.gene27640:CDS
ACTGCACTTGACATGGGATG+TGG 0.486235 7.2:+29659295 MS.gene27640:CDS
TTATTGGTGTCTATCATGAT+TGG 0.487456 7.2:+29660464 MS.gene27640:CDS
CTCCGGTCCTCCTGTTCGGT+GGG 0.487962 7.2:+29659773 MS.gene27640:CDS
AGGTCCCCTCTCCTGAAAAC+CGG 0.489154 7.2:+29660217 MS.gene27640:CDS
AAAAGAATGGTCAGATCTCC+AGG 0.491502 7.2:+29659806 MS.gene27640:CDS
TCTCCGGTCCTCCTGTTCGG+TGG 0.493729 7.2:+29659772 MS.gene27640:CDS
AAACAAACCGCAGTCTCCTC+CGG 0.498274 7.2:-29657274 None:intergenic
ATACAATTTGCCTTGGAAAG+AGG 0.505244 7.2:+29659496 MS.gene27640:CDS
ACAAGGCCTTTGCCACAGCC+TGG 0.506176 7.2:-29659824 None:intergenic
CTTATAAAAGATCCAGCTAC+TGG 0.507119 7.2:+29661021 MS.gene27640:CDS
TGGAAACATCGTACCACCAC+CGG 0.508503 7.2:-29659206 None:intergenic
TCCACCGCCTAATGGGTATC+GGG 0.510810 7.2:+29657300 MS.gene27640:CDS
CTTCTCGTTTCATCCACCCC+TGG 0.511990 7.2:-29659165 None:intergenic
CTTGTGGTGGCTATTGAGGA+AGG 0.519378 7.2:+29657121 MS.gene27640:CDS
ACAAGACGGTTGCGCTGTTG+TGG 0.521805 7.2:-29657103 None:intergenic
CTGTCAGCAATCTTGTTGTG+GGG 0.522422 7.2:-29659133 None:intergenic
GTTAGCCTCTCTGGCCACTT+GGG 0.524844 7.2:-29660181 None:intergenic
ACCAAGTCAAATCCAAAAGC+AGG 0.525653 7.2:-29659565 None:intergenic
AACGCACCAACACACGTCAA+TGG 0.527589 7.2:+29656969 MS.gene27640:CDS
AGATCTCCAGGCTGTGGCAA+AGG 0.528686 7.2:+29659818 MS.gene27640:CDS
GGTATCGGGTTCCGGTGAGG+TGG 0.533757 7.2:+29657314 MS.gene27640:CDS
CACTAAGCTGTGGGTACGGA+GGG 0.534730 7.2:+29660261 MS.gene27640:CDS
CAGCACACGGCGGCGACCAA+GGG 0.536436 7.2:-29657062 None:intergenic
GCGGCCGGAGGGAACTGTTG+TGG 0.538147 7.2:+29661694 MS.gene27640:CDS
CACTTTATATTCCCCGGTGG+TGG 0.538896 7.2:+29659193 MS.gene27640:CDS
GTTAAATGGGAAGAGTATTG+AGG 0.539727 7.2:+29657147 MS.gene27640:CDS
GGAAGACACGAATCTGCTGC+TGG 0.540770 7.2:-29659894 None:intergenic
TCTGAGGACTGCACTTGACA+TGG 0.541511 7.2:+29659288 MS.gene27640:CDS
CCAAGCATAGCAACAAAAGC+CGG 0.542023 7.2:-29659523 None:intergenic
ACCGCAGTCTCCTCCGGCAA+AGG 0.543088 7.2:-29657268 None:intergenic
AACCGGTGTTGATGTATATG+AGG 0.547717 7.2:+29660234 MS.gene27640:CDS
CTGGGGACCTAAGTCAAGCT+TGG 0.550202 7.2:+29659955 MS.gene27640:CDS
TAATATTGTTGATTTGATGG+TGG 0.554493 7.2:+29661655 MS.gene27640:CDS
AGCCGGTATTCCTCTTTCCA+AGG 0.555587 7.2:-29659506 None:intergenic
TGTTGGTGCGTTTCCATGGT+GGG 0.555874 7.2:-29656958 None:intergenic
CTTGATGCGATCTTTGACAG+AGG 0.556268 7.2:+29660439 MS.gene27640:CDS
GGTGGATATCTAGTCATCTC+CGG 0.556504 7.2:+29659756 MS.gene27640:CDS
TCCTTTGCCGGAGGAGACTG+CGG 0.558889 7.2:+29657267 MS.gene27640:CDS
ACAGGAAAGGTCACCAGGGG+TGG 0.559143 7.2:+29659152 MS.gene27640:CDS
CTGCACTTGACATGGGATGT+GGG 0.561100 7.2:+29659296 MS.gene27640:CDS
GGTCAACACTTTATATTCCC+CGG 0.564775 7.2:+29659187 MS.gene27640:CDS
AGCCCACCGAACAGGAGGAC+CGG 0.567603 7.2:-29659775 None:intergenic
GGTTCTTTATCATAAATGGT+CGG 0.570849 7.2:-29661779 None:intergenic
CTCAACTGACTATTCCTCCT+CGG 0.571473 7.2:-29657211 None:intergenic
ATGCTTTCAGGCCACCTCAC+CGG 0.571571 7.2:-29657325 None:intergenic
TGAGAGTTAGAGCTTCCATA+AGG 0.571739 7.2:-29661843 None:intergenic
GTGATTCAATGCTGGCCACA+TGG 0.572073 7.2:-29660999 None:intergenic
GGACATGAATGCATTATATG+GGG 0.573009 7.2:+29660345 MS.gene27640:CDS
GTGGATAGATTACTTCGCCC+TGG 0.574350 7.2:+29659735 MS.gene27640:CDS
ACCGGAACCCGATACCCATT+AGG 0.575177 7.2:-29657307 None:intergenic
GGAAACATCGTACCACCACC+GGG 0.575600 7.2:-29659205 None:intergenic
ACCCGATACCCATTAGGCGG+TGG 0.581597 7.2:-29657301 None:intergenic
CCTTAAAATCTGATCCTGTG+TGG 0.585740 7.2:+29660380 MS.gene27640:CDS
ATGGTCAGATCTCCAGGCTG+TGG 0.585744 7.2:+29659812 MS.gene27640:CDS
GAGAGGGGACCTCGAAGGTG+CGG 0.587301 7.2:-29660206 None:intergenic
TCAAAGATCGCATCAAGAGT+TGG 0.587538 7.2:-29660433 None:intergenic
TGTTGTGGATCAACGGTGGA+CGG 0.588409 7.2:-29657088 None:intergenic
TGCACTTGACATGGGATGTG+GGG 0.590574 7.2:+29659297 MS.gene27640:CDS
GGCTTGTCCTGCAAGTGAGG+TGG 0.591375 7.2:+29657168 MS.gene27640:CDS
GTGGCCTGAAAGCATGCATA+AGG 0.591970 7.2:+29657333 MS.gene27640:CDS
CGGTGGACGGAGCCAGCACA+CGG 0.592440 7.2:-29657075 None:intergenic
CTGACACTAAGCTGTGGGTA+CGG 0.592971 7.2:+29660257 MS.gene27640:CDS
AGTAGTACGTCGTCTATCAA+AGG 0.594144 7.2:+29660136 MS.gene27640:CDS
CTTAAAATCTGATCCTGTGT+GGG 0.595912 7.2:+29660381 MS.gene27640:CDS
CACACGGCGGCGACCAAGGG+TGG 0.596889 7.2:-29657059 None:intergenic
TTCCTCCTCGGATCCTCACA+CGG 0.597488 7.2:-29657199 None:intergenic
ACAACAGCGCAACCGTCTTG+TGG 0.602780 7.2:+29657105 MS.gene27640:CDS
GAATTTCTCATGCGGTGAGG+TGG 0.604415 7.2:+29661753 MS.gene27640:CDS
ATGGGTATCGGGTTCCGGTG+AGG 0.605394 7.2:+29657311 MS.gene27640:CDS
CTGAGGACTGCACTTGACAT+GGG 0.607454 7.2:+29659289 MS.gene27640:CDS
CCATAAATGGAGGTGTTCTG+AGG 0.608336 7.2:+29659272 MS.gene27640:CDS
GTTGCGCTGTTGTGGATCAA+CGG 0.608776 7.2:-29657095 None:intergenic
TTCAGGAGAGGGGACCTCGA+AGG 0.611046 7.2:-29660211 None:intergenic
ATATGCCGTGTGAGGATCCG+AGG 0.611947 7.2:+29657194 MS.gene27640:CDS
AACAAGATTGCTGACAGGAA+AGG 0.612391 7.2:+29659139 MS.gene27640:CDS
TGAGGCTTGTCCTGCAAGTG+AGG 0.612584 7.2:+29657165 MS.gene27640:CDS
CGCGAATTTCTCATGCGGTG+AGG 0.618831 7.2:+29661750 MS.gene27640:CDS
CCCACAACAAGATTGCTGAC+AGG 0.621138 7.2:+29659134 MS.gene27640:CDS
GGTGGTACGATGTTTCCAGA+TGG 0.623372 7.2:+29659211 MS.gene27640:CDS
GGATCAGATCATAAGTTCGA+GGG 0.623475 7.2:-29660978 None:intergenic
TGGATCAGATCATAAGTTCG+AGG 0.626818 7.2:-29660979 None:intergenic
GAGACATTGTCCTTTGCCGG+AGG 0.627674 7.2:+29657258 MS.gene27640:CDS
GACATGAATGCATTATATGG+GGG 0.628349 7.2:+29660346 MS.gene27640:CDS
ATGAGGCTGACACTAAGCTG+TGG 0.628841 7.2:+29660251 MS.gene27640:CDS
TGAATTATGTGATGATTCTG+GGG 0.629160 7.2:+29659938 MS.gene27640:CDS
GAGATGACTAGATATCCACC+AGG 0.630917 7.2:-29659753 None:intergenic
ATCTCTTGGAGCAAAAGACA+TGG 0.632314 7.2:-29659458 None:intergenic
CAATTCCCAAGTGGCCAGAG+AGG 0.633346 7.2:+29660176 MS.gene27640:CDS
ATTCACTAAATATAAAGTTG+GGG 0.633734 7.2:+29660299 MS.gene27640:CDS
GTGTTGGTGCGTTTCCATGG+TGG 0.634028 7.2:-29656959 None:intergenic
TGTTTAGCCCACCGAACAGG+AGG 0.634614 7.2:-29659780 None:intergenic
AAGATCGCATCAAGAGTTGG+TGG 0.642391 7.2:-29660430 None:intergenic
ACACTAAGCTGTGGGTACGG+AGG 0.649184 7.2:+29660260 MS.gene27640:CDS
GATAAAGAACCTGACTCACA+CGG 0.649646 7.2:+29661791 MS.gene27640:CDS
CAGGGGTGGATGAAACGAGA+AGG 0.650186 7.2:+29659166 MS.gene27640:CDS
TGAGGCTGACACTAAGCTGT+GGG 0.651463 7.2:+29660252 MS.gene27640:CDS
ACTACATTCATCACCCACAC+AGG 0.651770 7.2:-29660394 None:intergenic
CAATACATTCCCATAAATGG+AGG 0.655075 7.2:+29659262 MS.gene27640:CDS
GAGACGCCATTGACGTGTGT+TGG 0.655246 7.2:-29656975 None:intergenic
CTTACCACAACAGTTCCCTC+CGG 0.657553 7.2:-29661698 None:intergenic
ACAGCGCAACCGTCTTGTGG+TGG 0.669047 7.2:+29657108 MS.gene27640:CDS
GATAGATTACTTCGCCCTGG+TGG 0.672552 7.2:+29659738 MS.gene27640:CDS
CCTCAATAGCCACCACAAGA+CGG 0.672916 7.2:-29657117 None:intergenic
AGTTATCTGTTCATAACACA+AGG 0.678842 7.2:-29659841 None:intergenic
TTGTGGTGGCTATTGAGGAA+GGG 0.680797 7.2:+29657122 MS.gene27640:CDS
AACTTATGATCTGATCCATG+TGG 0.684133 7.2:+29660984 MS.gene27640:CDS
GTCACTCAAATTTCCCACCA+TGG 0.691297 7.2:+29656945 MS.gene27640:CDS
GGTGGATCATATGCCGTGTG+AGG 0.693101 7.2:+29657186 MS.gene27640:CDS
TGCCGTGTGAGGATCCGAGG+AGG 0.694563 7.2:+29657197 MS.gene27640:CDS
AGCCTCATATACATCAACAC+CGG 0.699420 7.2:-29660236 None:intergenic
GCTGACAGGAAAGGTCACCA+GGG 0.706997 7.2:+29659148 MS.gene27640:CDS
CTGACAGGAAAGGTCACCAG+GGG 0.710989 7.2:+29659149 MS.gene27640:CDS
GGAACCCGATACCCATTAGG+CGG 0.712447 7.2:-29657304 None:intergenic
GCGCTGTTGTGGATCAACGG+TGG 0.717072 7.2:-29657092 None:intergenic
CAACACTTTATATTCCCCGG+TGG 0.727815 7.2:+29659190 MS.gene27640:CDS
CTATTGGAACAATTCCCAAG+TGG 0.728324 7.2:+29660167 MS.gene27640:CDS
AGTAGCGCGAATTTCTCATG+CGG 0.745124 7.2:+29661745 MS.gene27640:CDS
AGATGACTAGATATCCACCA+GGG 0.765962 7.2:-29659752 None:intergenic
GAAACATCGTACCACCACCG+GGG 0.777476 7.2:-29659204 None:intergenic
TGGACGGAGCCAGCACACGG+CGG 0.777606 7.2:-29657072 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGATATTAAATTGATAA+TGG + chr7.2:29658145-29658164 MS.gene27640:intron 10.0%
!! CTTTATAAATGTAAAAAATA+TGG + chr7.2:29661409-29661428 MS.gene27640:intron 10.0%
!!! TGTATTTTTAATTTTTAATC+TGG + chr7.2:29660813-29660832 MS.gene27640:intron 10.0%
!! AAATTAGTAGTATTAATTAG+GGG + chr7.2:29658774-29658793 MS.gene27640:intron 15.0%
!! AATTCACTAAATATAAAGTT+GGG + chr7.2:29660298-29660317 MS.gene27640:CDS 15.0%
!! ACAAATTAGTAGTATTAATT+AGG + chr7.2:29658772-29658791 MS.gene27640:intron 15.0%
!! CAAATTAGTAGTATTAATTA+GGG + chr7.2:29658773-29658792 MS.gene27640:intron 15.0%
!!! TGATTTTAAAATAAGATATG+TGG + chr7.2:29660614-29660633 MS.gene27640:intron 15.0%
!! AAACTATAAGAGAAACTATT+AGG + chr7.2:29657925-29657944 MS.gene27640:intron 20.0%
!! AAATTTAAAAACTGTTGTGT+AGG + chr7.2:29658070-29658089 MS.gene27640:intron 20.0%
!! AACAGTATTTAAAGATGATA+TGG - chr7.2:29657619-29657638 None:intergenic 20.0%
!! AATTTAAAAACTGTTGTGTA+GGG + chr7.2:29658071-29658090 MS.gene27640:intron 20.0%
!! ATAAGGTTTAAAAAGTAAAG+AGG - chr7.2:29659336-29659355 None:intergenic 20.0%
!! ATTCACTAAATATAAAGTTG+GGG + chr7.2:29660299-29660318 MS.gene27640:CDS 20.0%
!! GAAAATACCTCTAAATTTAA+AGG - chr7.2:29658301-29658320 None:intergenic 20.0%
!! GAATTCACTAAATATAAAGT+TGG + chr7.2:29660297-29660316 MS.gene27640:CDS 20.0%
!! GGACAAAAATAAAATCAAAT+GGG + chr7.2:29658856-29658875 MS.gene27640:intron 20.0%
!! TGAAATTCTACAATATTTCT+TGG + chr7.2:29661282-29661301 MS.gene27640:intron 20.0%
!! TTTATTACACATACAAACAA+AGG - chr7.2:29658731-29658750 None:intergenic 20.0%
!!! AAATACTGTTTATTTGAGAT+CGG + chr7.2:29657629-29657648 MS.gene27640:intron 20.0%
!!! AATGAAAATTTTAATCTCCA+TGG - chr7.2:29658128-29658147 None:intergenic 20.0%
!!! ATGTAATATTGTTGATTTGA+TGG + chr7.2:29661652-29661671 MS.gene27640:CDS 20.0%
!!! ATTATTTTCCAGAAACATTA+GGG + chr7.2:29660527-29660546 MS.gene27640:intron 20.0%
!!! GGATTTTTTTTGTTTAGAAT+GGG + chr7.2:29658559-29658578 MS.gene27640:intron 20.0%
!!! TGGATTTTTTTTGTTTAGAA+TGG + chr7.2:29658558-29658577 MS.gene27640:intron 20.0%
!!! TTAGTAGAGTTTTTCAATTT+AGG - chr7.2:29661189-29661208 None:intergenic 20.0%
!!! TTTAATTTTTAATCTGGATG+CGG + chr7.2:29660819-29660838 MS.gene27640:intron 20.0%
!!! TTTTAAAATAAGATATGTGG+TGG + chr7.2:29660617-29660636 MS.gene27640:intron 20.0%
! AAACATCAATGATTAAAGCA+AGG - chr7.2:29661594-29661613 None:intergenic 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG - chr7.2:29658649-29658668 None:intergenic 25.0%
! AATACCATTCTCAAAACATA+AGG + chr7.2:29658192-29658211 MS.gene27640:intron 25.0%
! AATGAAATTGTGAAGAAATC+AGG - chr7.2:29661628-29661647 None:intergenic 25.0%
! ACAAGTACCTTTAAATTTAG+AGG + chr7.2:29658291-29658310 MS.gene27640:intron 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG - chr7.2:29658648-29658667 None:intergenic 25.0%
! AGAAATTACAACATTAGAGA+GGG + chr7.2:29657753-29657772 MS.gene27640:intron 25.0%
! AGATTTAGAGATTAATGAGT+TGG + chr7.2:29657950-29657969 MS.gene27640:intron 25.0%
! ATATATATCATGTGAATGTG+TGG + chr7.2:29660745-29660764 MS.gene27640:intron 25.0%
! ATTTAAAAACTGTTGTGTAG+GGG + chr7.2:29658072-29658091 MS.gene27640:intron 25.0%
! CATTTCTTAAGAAAAGTTGT+CGG + chr7.2:29658661-29658680 MS.gene27640:intron 25.0%
! CTACAAATTGAATCCTAATT+TGG - chr7.2:29658951-29658970 None:intergenic 25.0%
! GAAATTAATATAGAGGTGAT+AGG + chr7.2:29658977-29658996 MS.gene27640:intron 25.0%
! GGGACAAAAATAAAATCAAA+TGG + chr7.2:29658855-29658874 MS.gene27640:intron 25.0%
! GTGCAATGAAATTAATATAG+AGG + chr7.2:29658970-29658989 MS.gene27640:intron 25.0%
! TAACCAATTATAAAATGCCA+TGG + chr7.2:29658108-29658127 MS.gene27640:intron 25.0%
! TAGAAATTACAACATTAGAG+AGG + chr7.2:29657752-29657771 MS.gene27640:intron 25.0%
! TAGAGAGATGAATTACTATA+GGG + chr7.2:29657234-29657253 MS.gene27640:CDS 25.0%
! TATATCCATTTGTATCGTAA+TGG + chr7.2:29660890-29660909 MS.gene27640:intron 25.0%
! TGAAAAGGAGTTTACATTTA+GGG + chr7.2:29658835-29658854 MS.gene27640:intron 25.0%
! TGAAGTAAAATGGAGTAAAA+TGG - chr7.2:29659394-29659413 None:intergenic 25.0%
! TTGAAAAGGAGTTTACATTT+AGG + chr7.2:29658834-29658853 MS.gene27640:intron 25.0%
! TTGAATTATGTGATGATTCT+GGG + chr7.2:29659937-29659956 MS.gene27640:CDS 25.0%
! TTTGCCAAGTATTAAGATAT+AGG - chr7.2:29660567-29660586 None:intergenic 25.0%
!! ATTTTACTCCATTTTACTTC+AGG + chr7.2:29659393-29659412 MS.gene27640:intron 25.0%
!! CATAGTAAATTTTCTGCATA+AGG - chr7.2:29659692-29659711 None:intergenic 25.0%
!! GATTATTTTCCAGAAACATT+AGG + chr7.2:29660526-29660545 MS.gene27640:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr7.2:29657921-29657940 None:intergenic 25.0%
!! TAATATGTTTTGTGCAGATA+TGG + chr7.2:29659098-29659117 MS.gene27640:intron 25.0%
!! TATTAATTAGGGGTATGTTT+AGG + chr7.2:29658784-29658803 MS.gene27640:intron 25.0%
!! TTGTCTTATTGTTGCTATTA+TGG + chr7.2:29658465-29658484 MS.gene27640:intron 25.0%
!! TTTTATAAGTGATTCAATGC+TGG - chr7.2:29661010-29661029 None:intergenic 25.0%
!!! ATGCATCTAGTATTTTGAAA+AGG + chr7.2:29658820-29658839 MS.gene27640:intron 25.0%
!!! ATTTTAAAATCATGTCTGCA+AGG - chr7.2:29660606-29660625 None:intergenic 25.0%
!!! TAAATTTAGAGGTATTTTCC+AGG + chr7.2:29658302-29658321 MS.gene27640:intron 25.0%
!!! TAATATTGTTGATTTGATGG+TGG + chr7.2:29661655-29661674 MS.gene27640:CDS 25.0%
AAAATAGACTTAGGTGGTTT+GGG + chr7.2:29657811-29657830 MS.gene27640:intron 30.0%
AAATGTGAAAAAAGCAAAGG+GGG - chr7.2:29658646-29658665 None:intergenic 30.0%
AAATTTACCAAGCTTGACTT+AGG - chr7.2:29659965-29659984 None:intergenic 30.0%
AATCGATAGAATAACAGCTT+AGG - chr7.2:29661103-29661122 None:intergenic 30.0%
AGAGATGCAAAGATAATCAA+AGG - chr7.2:29659988-29660007 None:intergenic 30.0%
AGTCAATACATTCCCATAAA+TGG + chr7.2:29659259-29659278 MS.gene27640:CDS 30.0%
AGTTATCTGTTCATAACACA+AGG - chr7.2:29659844-29659863 None:intergenic 30.0%
ATAAGATTGATCTTCAATCC+TGG - chr7.2:29658323-29658342 None:intergenic 30.0%
ATCAAAGGAGATTATGCTAT+TGG + chr7.2:29660151-29660170 MS.gene27640:CDS 30.0%
ATGGACATGAATGCATTATA+TGG + chr7.2:29660343-29660362 MS.gene27640:CDS 30.0%
ATGGCCTATATCTTAATACT+TGG + chr7.2:29660560-29660579 MS.gene27640:intron 30.0%
CAAATGGGTGTTTAGATATA+GGG + chr7.2:29658871-29658890 MS.gene27640:intron 30.0%
CAAATTGTCGAGATCTATAA+AGG - chr7.2:29661158-29661177 None:intergenic 30.0%
CAGTGATCAATTCTAGTATA+AGG - chr7.2:29659353-29659372 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG - chr7.2:29658722-29658741 None:intergenic 30.0%
CTTGAATTATGTGATGATTC+TGG + chr7.2:29659936-29659955 MS.gene27640:CDS 30.0%
GAAATGTGAAAAAAGCAAAG+GGG - chr7.2:29658647-29658666 None:intergenic 30.0%
GAGAAAGAGTAATGAGAAAA+AGG - chr7.2:29657020-29657039 None:intergenic 30.0%
GGTTCTTTATCATAAATGGT+CGG - chr7.2:29661782-29661801 None:intergenic 30.0%
GTAGAGAGATGAATTACTAT+AGG + chr7.2:29657233-29657252 MS.gene27640:CDS 30.0%
GTCAGGTTCTTTATCATAAA+TGG - chr7.2:29661786-29661805 None:intergenic 30.0%
TACATCCATTACGATACAAA+TGG - chr7.2:29660898-29660917 None:intergenic 30.0%
TATGTTGCAGACTTCATATA+TGG + chr7.2:29658426-29658445 MS.gene27640:intron 30.0%
TCAAATGGGTGTTTAGATAT+AGG + chr7.2:29658870-29658889 MS.gene27640:intron 30.0%
TGAATTATGTGATGATTCTG+GGG + chr7.2:29659938-29659957 MS.gene27640:CDS 30.0%
TGCAACTTATTTCATTGAAG+TGG + chr7.2:29659716-29659735 MS.gene27640:CDS 30.0%
TGGACATGAATGCATTATAT+GGG + chr7.2:29660344-29660363 MS.gene27640:CDS 30.0%
TTACCAAAAACAATTGATGC+AGG - chr7.2:29657560-29657579 None:intergenic 30.0%
TTCATGCATCTTCTCTTAAA+GGG + chr7.2:29660504-29660523 MS.gene27640:intron 30.0%
TTTGACATGAATCTAATAGG+AGG - chr7.2:29661521-29661540 None:intergenic 30.0%
! AACTAAGATGATCATTTTGC+AGG + chr7.2:29660089-29660108 MS.gene27640:intron 30.0%
! AGTTGCTTTCATGATACTTA+CGG + chr7.2:29660676-29660695 MS.gene27640:intron 30.0%
! TAAAATTTGCTTTAGCCTAG+AGG - chr7.2:29661563-29661582 None:intergenic 30.0%
! TATTGTTGCTATTATGGTTG+TGG + chr7.2:29658471-29658490 MS.gene27640:intron 30.0%
! TCTCCATGGCATTTTATAAT+TGG - chr7.2:29658114-29658133 None:intergenic 30.0%
! TGGAAATTGATCGAATTTTG+CGG + chr7.2:29661675-29661694 MS.gene27640:CDS 30.0%
! TTACCTGCATCAATTGTTTT+TGG + chr7.2:29657554-29657573 MS.gene27640:intron 30.0%
! TTATTGGTGTCTATCATGAT+TGG + chr7.2:29660464-29660483 MS.gene27640:CDS 30.0%
!! TATGGTTTACTTTTGCTATG+AGG + chr7.2:29661427-29661446 MS.gene27640:intron 30.0%
!! TATGTTTGGGTTGTATTTAC+TGG + chr7.2:29658591-29658610 MS.gene27640:intron 30.0%
!!! GTATCCTTATGTTTTGAGAA+TGG - chr7.2:29658199-29658218 None:intergenic 30.0%
!!! TCGTAATGGATGTATTTTCT+TGG + chr7.2:29660904-29660923 MS.gene27640:intron 30.0%
AACTTACTGTAGGCTGTAAA+CGG - chr7.2:29659613-29659632 None:intergenic 35.0%
AACTTATGATCTGATCCATG+TGG + chr7.2:29660984-29661003 MS.gene27640:CDS 35.0%
AATGTGAAAAAAGCAAAGGG+GGG - chr7.2:29658645-29658664 None:intergenic 35.0%
ACATTAGGGTTGTGATCTTA+TGG + chr7.2:29660541-29660560 MS.gene27640:intron 35.0%
ACTAGCAACCTGAAGTAAAA+TGG - chr7.2:29659404-29659423 None:intergenic 35.0%
AGAAAAAGGCAATGGAAATG+AGG - chr7.2:29657006-29657025 None:intergenic 35.0%
AGACCAAACTCATTTCCATT+AGG - chr7.2:29659918-29659937 None:intergenic 35.0%
AGTGTGATGAAATTGAGATG+AGG + chr7.2:29658912-29658931 MS.gene27640:intron 35.0%
ATACAATTTGCCTTGGAAAG+AGG + chr7.2:29659496-29659515 MS.gene27640:CDS 35.0%
ATATATTGTTCTGCTCCATC+TGG - chr7.2:29659229-29659248 None:intergenic 35.0%
ATCATGTCTGCAAGGAAAAA+TGG - chr7.2:29660598-29660617 None:intergenic 35.0%
ATCCAGCTACTGGTAAAAAA+AGG + chr7.2:29661031-29661050 MS.gene27640:CDS 35.0%
ATCTTTGACAGAGGACTTAT+TGG + chr7.2:29660448-29660467 MS.gene27640:CDS 35.0%
ATTGAGGAAGGGATGTTAAA+TGG + chr7.2:29657133-29657152 MS.gene27640:CDS 35.0%
ATTTCTAATTCCCTCCCAAA+TGG - chr7.2:29657739-29657758 None:intergenic 35.0%
CAATACATTCCCATAAATGG+AGG + chr7.2:29659262-29659281 MS.gene27640:CDS 35.0%
CGGTTTGACATGAATCTAAT+AGG - chr7.2:29661524-29661543 None:intergenic 35.0%
CTTAAAATCTGATCCTGTGT+GGG + chr7.2:29660381-29660400 MS.gene27640:CDS 35.0%
CTTATAAAAGATCCAGCTAC+TGG + chr7.2:29661021-29661040 MS.gene27640:CDS 35.0%
CTTCCTAATGGAAATGAGTT+TGG + chr7.2:29659912-29659931 MS.gene27640:CDS 35.0%
GAAAATAGACTTAGGTGGTT+TGG + chr7.2:29657810-29657829 MS.gene27640:intron 35.0%
GACATGAATGCATTATATGG+GGG + chr7.2:29660346-29660365 MS.gene27640:CDS 35.0%
GAGTAATGAGAAAAAGGCAA+TGG - chr7.2:29657014-29657033 None:intergenic 35.0%
GATGTATGGTAAGACCATTT+GGG + chr7.2:29657722-29657741 MS.gene27640:intron 35.0%
GGACATGAATGCATTATATG+GGG + chr7.2:29660345-29660364 MS.gene27640:CDS 35.0%
GTTCATGCATCTTCTCTTAA+AGG + chr7.2:29660503-29660522 MS.gene27640:intron 35.0%
TAATCTGATGTCACATCTCT+AGG + chr7.2:29661074-29661093 MS.gene27640:intron 35.0%
TACATGAAAACACTGCAATC+TGG + chr7.2:29659865-29659884 MS.gene27640:CDS 35.0%
TCAAATCCAAAAGCAGGAAA+TGG - chr7.2:29659562-29659581 None:intergenic 35.0%
TGAGAATGTGAAGCCAAATT+AGG + chr7.2:29658935-29658954 MS.gene27640:intron 35.0%
TGCGATTTATGTGAATCTCT+TGG - chr7.2:29659475-29659494 None:intergenic 35.0%
TGGTAGACATGATGCATTAT+TGG + chr7.2:29658385-29658404 MS.gene27640:intron 35.0%
TTGAGGAAGGGATGTTAAAT+GGG + chr7.2:29657134-29657153 MS.gene27640:CDS 35.0%
! ATTGTGAAGAAATCAGGTTG+AGG - chr7.2:29661622-29661641 None:intergenic 35.0%
! CATGTACTTAAAAGCGTGTT+TGG + chr7.2:29657448-29657467 MS.gene27640:intron 35.0%
! CGCTACTTTGTCAATTACTT+CGG - chr7.2:29661732-29661751 None:intergenic 35.0%
! GCAAGGTATTTGATGTTCAA+TGG + chr7.2:29661492-29661511 MS.gene27640:intron 35.0%
! GCTACTTTGTCAATTACTTC+GGG - chr7.2:29661731-29661750 None:intergenic 35.0%
! GGAGTTATTGTGTTTTGTGA+AGG + chr7.2:29658516-29658535 MS.gene27640:intron 35.0%
! TAATGAGTTGGATGCAAATG+TGG + chr7.2:29657962-29657981 MS.gene27640:intron 35.0%
! TTGTGTTTTGTGAAGGACTT+AGG + chr7.2:29658523-29658542 MS.gene27640:intron 35.0%
! TTTTTAATCTGGATGCGGTT+CGG + chr7.2:29660824-29660843 MS.gene27640:intron 35.0%
!! ACGTGTGGTTTTTCAAATCA+AGG - chr7.2:29657534-29657553 None:intergenic 35.0%
!! AGATGGTGGAAAATAGACTT+AGG + chr7.2:29657802-29657821 MS.gene27640:intron 35.0%
!! CGTGTGGTTTTTCAAATCAA+GGG - chr7.2:29657533-29657552 None:intergenic 35.0%
!! GTTAAATGGGAAGAGTATTG+AGG + chr7.2:29657147-29657166 MS.gene27640:CDS 35.0%
!! TCAATAAAGTGTTGCAGTAG+CGG + chr7.2:29657662-29657681 MS.gene27640:intron 35.0%
!! TTGACTTGGTTCATTGTTCT+CGG + chr7.2:29659578-29659597 MS.gene27640:CDS 35.0%
!!! GGTGTAGTTTTTTGGAAAGT+TGG + chr7.2:29657359-29657378 MS.gene27640:intron 35.0%
!!! TAAGGTGTGGTGTAGTTTTT+TGG + chr7.2:29657351-29657370 MS.gene27640:intron 35.0%
!!! TACCTTTTTTTACCAGTAGC+TGG - chr7.2:29661036-29661055 None:intergenic 35.0%
!!! TAGTTTTGACCAAGACCTTA+TGG + chr7.2:29661828-29661847 MS.gene27640:CDS 35.0%
!!! TTACTTCAGGTTGCTAGTTT+TGG + chr7.2:29659406-29659425 MS.gene27640:intron 35.0%
AAAAGAATGGTCAGATCTCC+AGG + chr7.2:29659806-29659825 MS.gene27640:CDS 40.0%
AACAAGATTGCTGACAGGAA+AGG + chr7.2:29659139-29659158 MS.gene27640:CDS 40.0%
AATTGATGCAGGTAAACGTG+TGG - chr7.2:29657549-29657568 None:intergenic 40.0%
ACCAAGTCAAATCCAAAAGC+AGG - chr7.2:29659568-29659587 None:intergenic 40.0%
ACCTTGAGTAGAAAAGATGG+TGG + chr7.2:29657788-29657807 MS.gene27640:intron 40.0%
AGATGACTAGATATCCACCA+GGG - chr7.2:29659755-29659774 None:intergenic 40.0%
AGCACCTTGAGTAGAAAAGA+TGG + chr7.2:29657785-29657804 MS.gene27640:intron 40.0%
AGCCTCATATACATCAACAC+CGG - chr7.2:29660239-29660258 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + chr7.2:29657863-29657882 MS.gene27640:intron 40.0%
AGTAGTACGTCGTCTATCAA+AGG + chr7.2:29660136-29660155 MS.gene27640:CDS 40.0%
AGTCAAATCACTAGAGGTAG+AGG + chr7.2:29657891-29657910 MS.gene27640:intron 40.0%
ATATAGAGGTGATAGGCTGA+TGG + chr7.2:29658984-29659003 MS.gene27640:intron 40.0%
ATCGCAGATACAATTTGCCT+TGG + chr7.2:29659489-29659508 MS.gene27640:CDS 40.0%
ATCTCTTGGAGCAAAAGACA+TGG - chr7.2:29659461-29659480 None:intergenic 40.0%
ATGATGTTGCCTTGGATGTA+TGG + chr7.2:29657708-29657727 MS.gene27640:intron 40.0%
ATGGGATAGTGCTGTATGTT+TGG + chr7.2:29658577-29658596 MS.gene27640:intron 40.0%
ATGTTTCAAAGAAGCAGCAC+AGG - chr7.2:29661316-29661335 None:intergenic 40.0%
CATGATGCATTATTGGACAC+TGG + chr7.2:29658392-29658411 MS.gene27640:intron 40.0%
CCTTAAAATCTGATCCTGTG+TGG + chr7.2:29660380-29660399 MS.gene27640:CDS 40.0%
CGGCTACATGGATCAAATTA+CGG - chr7.2:29658007-29658026 None:intergenic 40.0%
CTATTGGAACAATTCCCAAG+TGG + chr7.2:29660167-29660186 MS.gene27640:CDS 40.0%
CTCAGAACACCTCCATTTAT+GGG - chr7.2:29659274-29659293 None:intergenic 40.0%
CTCCTTACTACACAATCTAC+AGG - chr7.2:29657852-29657871 None:intergenic 40.0%
GACCTGTAGATTGTGTAGTA+AGG + chr7.2:29657847-29657866 MS.gene27640:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG + chr7.2:29657885-29657904 MS.gene27640:intron 40.0%
GATAAAGAACCTGACTCACA+CGG + chr7.2:29661791-29661810 MS.gene27640:CDS 40.0%
GATCACAACCCTAATGTTTC+TGG - chr7.2:29660538-29660557 None:intergenic 40.0%
GGAGAATAAAGTAAGCGTAG+CGG + chr7.2:29657683-29657702 MS.gene27640:intron 40.0%
GGATCAGATCATAAGTTCGA+GGG - chr7.2:29660981-29661000 None:intergenic 40.0%
GGATGTATGGTAAGACCATT+TGG + chr7.2:29657721-29657740 MS.gene27640:intron 40.0%
GGGCTAAACAGGAAAAAGAA+TGG + chr7.2:29659793-29659812 MS.gene27640:CDS 40.0%
GGTCAACACTTTATATTCCC+CGG + chr7.2:29659187-29659206 MS.gene27640:CDS 40.0%
GTAGAGTTTGAATCAGTGCA+AGG + chr7.2:29661475-29661494 MS.gene27640:intron 40.0%
GTTGAAAAAGGTTCACACCT+GGG - chr7.2:29660955-29660974 None:intergenic 40.0%
TACAACATTAGAGAGGGAGT+TGG + chr7.2:29657759-29657778 MS.gene27640:intron 40.0%
TATGGTAAGACCATTTGGGA+GGG + chr7.2:29657726-29657745 MS.gene27640:intron 40.0%
TCAAAGATCGCATCAAGAGT+TGG - chr7.2:29660436-29660455 None:intergenic 40.0%
TCCATAACGTTGCGTATTGA+TGG - chr7.2:29660328-29660347 None:intergenic 40.0%
TCCATCAATACGCAACGTTA+TGG + chr7.2:29660324-29660343 MS.gene27640:CDS 40.0%
TCCCTCCAAGTTACATAACA+AGG - chr7.2:29658499-29658518 None:intergenic 40.0%
TGAGGGCAAGATAGTGAAAA+TGG + chr7.2:29658365-29658384 MS.gene27640:intron 40.0%
TGCAATGCAGAACTTACTGT+AGG - chr7.2:29659623-29659642 None:intergenic 40.0%
TGGATCAGATCATAAGTTCG+AGG - chr7.2:29660982-29661001 None:intergenic 40.0%
TGGGATAGTGCTGTATGTTT+GGG + chr7.2:29658578-29658597 MS.gene27640:intron 40.0%
TGGGTGTTTAGATATAGGGA+CGG + chr7.2:29658875-29658894 MS.gene27640:intron 40.0%
TGGTGGAAAATAGACTTAGG+TGG + chr7.2:29657805-29657824 MS.gene27640:intron 40.0%
TGTTGAAAAAGGTTCACACC+TGG - chr7.2:29660956-29660975 None:intergenic 40.0%
TGTTTAGATATAGGGACGGA+GGG + chr7.2:29658879-29658898 MS.gene27640:intron 40.0%
TTAGAGCTTCCATAAGGTCT+TGG - chr7.2:29661840-29661859 None:intergenic 40.0%
! AATTGATCGAATTTTGCGGC+CGG + chr7.2:29661679-29661698 MS.gene27640:CDS 40.0%
! AGACTTCCATTTCCTGCTTT+TGG + chr7.2:29659553-29659572 MS.gene27640:CDS 40.0%
! ATGGTCTTACCATACATCCA+AGG - chr7.2:29657720-29657739 None:intergenic 40.0%
! CCACACAGGATCAGATTTTA+AGG - chr7.2:29660383-29660402 None:intergenic 40.0%
! GCCTTGTTATGTAACTTGGA+GGG + chr7.2:29658495-29658514 MS.gene27640:intron 40.0%
! GTTCGAGGGTATGTTGAAAA+AGG - chr7.2:29660967-29660986 None:intergenic 40.0%
! TCCACCATCTTTTCTACTCA+AGG - chr7.2:29657792-29657811 None:intergenic 40.0%
! TCGATTGATTCATCTGCTCT+TGG + chr7.2:29659027-29659046 MS.gene27640:intron 40.0%
! TGCCTTGTTATGTAACTTGG+AGG + chr7.2:29658494-29658513 MS.gene27640:intron 40.0%
! TGGTGCCTTGTTATGTAACT+TGG + chr7.2:29658491-29658510 MS.gene27640:intron 40.0%
!! AACCGGTGTTGATGTATATG+AGG + chr7.2:29660234-29660253 MS.gene27640:CDS 40.0%
!! TCCTGCTTTTGGATTTGACT+TGG + chr7.2:29659564-29659583 MS.gene27640:CDS 40.0%
!!! ATACATCAACACCGGTTTTC+AGG - chr7.2:29660231-29660250 None:intergenic 40.0%
!!! GACTTAGGAGCTTGTTTTTG+TGG + chr7.2:29658538-29658557 MS.gene27640:intron 40.0%
AACTTACAGCAACAGCCTCT+AGG + chr7.2:29661545-29661564 MS.gene27640:intron 45.0%
AAGATCGCATCAAGAGTTGG+TGG - chr7.2:29660433-29660452 None:intergenic 45.0%
AAGGAGAGTAGATCAGATGG+AGG + chr7.2:29657866-29657885 MS.gene27640:intron 45.0%
ACTACATTCATCACCCACAC+AGG - chr7.2:29660397-29660416 None:intergenic 45.0%
ACTGAGAAGCTACTGCAATG+AGG + chr7.2:29658347-29658366 MS.gene27640:intron 45.0%
AGCAAAGGGGGGTTACATTA+AGG - chr7.2:29658634-29658653 None:intergenic 45.0%
AGTAGCGCGAATTTCTCATG+CGG + chr7.2:29661745-29661764 MS.gene27640:CDS 45.0%
ATATGATCCACCTCACTTGC+AGG - chr7.2:29657178-29657197 None:intergenic 45.0%
CAACACTTTATATTCCCCGG+TGG + chr7.2:29659190-29659209 MS.gene27640:CDS 45.0%
CACACCTTATGCATGCTTTC+AGG - chr7.2:29657340-29657359 None:intergenic 45.0%
CCAAGCATAGCAACAAAAGC+CGG - chr7.2:29659526-29659545 None:intergenic 45.0%
CCTCAGAACACCTCCATTTA+TGG - chr7.2:29659275-29659294 None:intergenic 45.0%
CTCAACTGACTATTCCTCCT+CGG - chr7.2:29657214-29657233 None:intergenic 45.0%
CTGAGAAGCTACTGCAATGA+GGG + chr7.2:29658348-29658367 MS.gene27640:intron 45.0%
CTTATCCCACTAAGTGGAGT+CGG - chr7.2:29658027-29658046 None:intergenic 45.0%
CTTGATGCGATCTTTGACAG+AGG + chr7.2:29660439-29660458 MS.gene27640:CDS 45.0%
GAGATGACTAGATATCCACC+AGG - chr7.2:29659756-29659775 None:intergenic 45.0%
GATGCATTATTGGACACTGG+TGG + chr7.2:29658395-29658414 MS.gene27640:intron 45.0%
GCAAAGGGGGGTTACATTAA+GGG - chr7.2:29658633-29658652 None:intergenic 45.0%
GCAGATTCGTGTCTTCCTAA+TGG + chr7.2:29659900-29659919 MS.gene27640:CDS 45.0%
GGTGGATATCTAGTCATCTC+CGG + chr7.2:29659756-29659775 MS.gene27640:CDS 45.0%
GTATGGTAAGACCATTTGGG+AGG + chr7.2:29657725-29657744 MS.gene27640:intron 45.0%
GTCACTCAAATTTCCCACCA+TGG + chr7.2:29656945-29656964 MS.gene27640:CDS 45.0%
GTGTTTAGATATAGGGACGG+AGG + chr7.2:29658878-29658897 MS.gene27640:intron 45.0%
GTTTGATTCCACCGCCTAAT+GGG + chr7.2:29657293-29657312 MS.gene27640:CDS 45.0%
TCCTGTCAGCAATCTTGTTG+TGG - chr7.2:29659138-29659157 None:intergenic 45.0%
TGCCTTGGAAAGAGGAATAC+CGG + chr7.2:29659504-29659523 MS.gene27640:CDS 45.0%
TGTTTGATTCCACCGCCTAA+TGG + chr7.2:29657292-29657311 MS.gene27640:CDS 45.0%
TTGTGGTGGCTATTGAGGAA+GGG + chr7.2:29657122-29657141 MS.gene27640:CDS 45.0%
! CCTGTCAGCAATCTTGTTGT+GGG - chr7.2:29659137-29659156 None:intergenic 45.0%
! CTGAAAGCATGCATAAGGTG+TGG + chr7.2:29657338-29657357 MS.gene27640:intron 45.0%
! CTGTCAGCAATCTTGTTGTG+GGG - chr7.2:29659136-29659155 None:intergenic 45.0%
! GTTCTCTTTTACACCACCCT+TGG + chr7.2:29657046-29657065 MS.gene27640:CDS 45.0%
!! CCATAAATGGAGGTGTTCTG+AGG + chr7.2:29659272-29659291 MS.gene27640:CDS 45.0%
!!! CTTCAGGTTGCTAGTTTTGG+AGG + chr7.2:29659409-29659428 MS.gene27640:intron 45.0%
!!! TTTTCTTTTTTTTTTTTTTT+TGG + chr7.2:29660710-29660729 MS.gene27640:intron 5.0%
AAACAAACCGCAGTCTCCTC+CGG - chr7.2:29657277-29657296 None:intergenic 50.0%
AACGCACCAACACACGTCAA+TGG + chr7.2:29656969-29656988 MS.gene27640:CDS 50.0%
ACTAAGTGGAGTCGGCTACA+TGG - chr7.2:29658019-29658038 None:intergenic 50.0%
ACTGCACTTGACATGGGATG+TGG + chr7.2:29659295-29659314 MS.gene27640:CDS 50.0%
AGCCGGTATTCCTCTTTCCA+AGG - chr7.2:29659509-29659528 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG - chr7.2:29658629-29658648 None:intergenic 50.0%
ATGAGGCTGACACTAAGCTG+TGG + chr7.2:29660251-29660270 MS.gene27640:CDS 50.0%
CACTTTATATTCCCCGGTGG+TGG + chr7.2:29659193-29659212 MS.gene27640:CDS 50.0%
CATAGTGACACTGACACACG+TGG + chr7.2:29657495-29657514 MS.gene27640:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7.2:29658030-29658049 MS.gene27640:intron 50.0%
CCCACAACAAGATTGCTGAC+AGG + chr7.2:29659134-29659153 MS.gene27640:CDS 50.0%
CCTCAATAGCCACCACAAGA+CGG - chr7.2:29657120-29657139 None:intergenic 50.0%
CGACTCCACTTAGTGGGATA+AGG + chr7.2:29658025-29658044 MS.gene27640:intron 50.0%
CTGACACTAAGCTGTGGGTA+CGG + chr7.2:29660257-29660276 MS.gene27640:CDS 50.0%
CTGAGGACTGCACTTGACAT+GGG + chr7.2:29659289-29659308 MS.gene27640:CDS 50.0%
CTGCACTTGACATGGGATGT+GGG + chr7.2:29659296-29659315 MS.gene27640:CDS 50.0%
CTTACCACAACAGTTCCCTC+CGG - chr7.2:29661701-29661720 None:intergenic 50.0%
CTTGTGGTGGCTATTGAGGA+AGG + chr7.2:29657121-29657140 MS.gene27640:CDS 50.0%
GAATTTCTCATGCGGTGAGG+TGG + chr7.2:29661753-29661772 MS.gene27640:CDS 50.0%
GAGGCTGTTGCTGTAAGTTG+CGG - chr7.2:29661544-29661563 None:intergenic 50.0%
GAGGTGATAGGCTGATGGAA+TGG + chr7.2:29658989-29659008 MS.gene27640:intron 50.0%
GATAGATTACTTCGCCCTGG+TGG + chr7.2:29659738-29659757 MS.gene27640:CDS 50.0%
GGAGAGACATTGTCCTTTGC+CGG + chr7.2:29657255-29657274 MS.gene27640:CDS 50.0%
GGGTTACATTAAGGGACGGA+GGG - chr7.2:29658625-29658644 None:intergenic 50.0%
GGTGGTACGATGTTTCCAGA+TGG + chr7.2:29659211-29659230 MS.gene27640:CDS 50.0%
GTGATTCAATGCTGGCCACA+TGG - chr7.2:29661002-29661021 None:intergenic 50.0%
GTGGATAGATTACTTCGCCC+TGG + chr7.2:29659735-29659754 MS.gene27640:CDS 50.0%
GTTGCGCTGTTGTGGATCAA+CGG - chr7.2:29657098-29657117 None:intergenic 50.0%
TAGCGGAGATGATGTTGCCT+TGG + chr7.2:29657700-29657719 MS.gene27640:intron 50.0%
TCTGAGGACTGCACTTGACA+TGG + chr7.2:29659288-29659307 MS.gene27640:CDS 50.0%
TGAGGCTGACACTAAGCTGT+GGG + chr7.2:29660252-29660271 MS.gene27640:CDS 50.0%
TGCACTTGACATGGGATGTG+GGG + chr7.2:29659297-29659316 MS.gene27640:CDS 50.0%
TGGAAACATCGTACCACCAC+CGG - chr7.2:29659209-29659228 None:intergenic 50.0%
TGTTGGTGCGTTTCCATGGT+GGG - chr7.2:29656961-29656980 None:intergenic 50.0%
TGTTGTGGATCAACGGTGGA+CGG - chr7.2:29657091-29657110 None:intergenic 50.0%
! ATGTAGCCGACTCCACTTAG+TGG + chr7.2:29658018-29658037 MS.gene27640:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7.2:29658033-29658052 None:intergenic 50.0%
! CCGGCTTTTGTTGCTATGCT+TGG + chr7.2:29659523-29659542 MS.gene27640:CDS 50.0%
! GTGGCCTGAAAGCATGCATA+AGG + chr7.2:29657333-29657352 MS.gene27640:CDS 50.0%
! TGTAGCCGACTCCACTTAGT+GGG + chr7.2:29658019-29658038 MS.gene27640:intron 50.0%
! TTCCACCGCCTAATGGGTAT+CGG + chr7.2:29657299-29657318 MS.gene27640:CDS 50.0%
! TTTTCTCTGCCGTGTGAGTC+AGG - chr7.2:29661803-29661822 None:intergenic 50.0%
!!! AACACCGGTTTTCAGGAGAG+GGG - chr7.2:29660224-29660243 None:intergenic 50.0%
!!! AGAGTTGGTGGCTTTTGAGC+TGG - chr7.2:29660421-29660440 None:intergenic 50.0%
!!! CAACACCGGTTTTCAGGAGA+GGG - chr7.2:29660225-29660244 None:intergenic 50.0%
!!! TCAACACCGGTTTTCAGGAG+AGG - chr7.2:29660226-29660245 None:intergenic 50.0%
ACAACAGCGCAACCGTCTTG+TGG + chr7.2:29657105-29657124 MS.gene27640:CDS 55.0%
ACAAGACGGTTGCGCTGTTG+TGG - chr7.2:29657106-29657125 None:intergenic 55.0%
ACACTAAGCTGTGGGTACGG+AGG + chr7.2:29660260-29660279 MS.gene27640:CDS 55.0%
ACCGGAACCCGATACCCATT+AGG - chr7.2:29657310-29657329 None:intergenic 55.0%
AGATCTCCAGGCTGTGGCAA+AGG + chr7.2:29659818-29659837 MS.gene27640:CDS 55.0%
AGGTCCCCTCTCCTGAAAAC+CGG + chr7.2:29660217-29660236 MS.gene27640:CDS 55.0%
ATATGCCGTGTGAGGATCCG+AGG + chr7.2:29657194-29657213 MS.gene27640:CDS 55.0%
ATGCTTTCAGGCCACCTCAC+CGG - chr7.2:29657328-29657347 None:intergenic 55.0%
ATGGTCAGATCTCCAGGCTG+TGG + chr7.2:29659812-29659831 MS.gene27640:CDS 55.0%
CAATTCCCAAGTGGCCAGAG+AGG + chr7.2:29660176-29660195 MS.gene27640:CDS 55.0%
CACTAAGCTGTGGGTACGGA+GGG + chr7.2:29660261-29660280 MS.gene27640:CDS 55.0%
CAGGGGTGGATGAAACGAGA+AGG + chr7.2:29659166-29659185 MS.gene27640:CDS 55.0%
CCGTCTTGTGGTGGCTATTG+AGG + chr7.2:29657117-29657136 MS.gene27640:CDS 55.0%
CGCGAATTTCTCATGCGGTG+AGG + chr7.2:29661750-29661769 MS.gene27640:CDS 55.0%
CTGACAGGAAAGGTCACCAG+GGG + chr7.2:29659149-29659168 MS.gene27640:CDS 55.0%
CTGGGGACCTAAGTCAAGCT+TGG + chr7.2:29659955-29659974 MS.gene27640:CDS 55.0%
CTTCTCGTTTCATCCACCCC+TGG - chr7.2:29659168-29659187 None:intergenic 55.0%
GAAACATCGTACCACCACCG+GGG - chr7.2:29659207-29659226 None:intergenic 55.0%
GAGACATTGTCCTTTGCCGG+AGG + chr7.2:29657258-29657277 MS.gene27640:CDS 55.0%
GAGACGCCATTGACGTGTGT+TGG - chr7.2:29656978-29656997 None:intergenic 55.0%
GCTGACAGGAAAGGTCACCA+GGG + chr7.2:29659148-29659167 MS.gene27640:CDS 55.0%
GGAAACATCGTACCACCACC+GGG - chr7.2:29659208-29659227 None:intergenic 55.0%
GGAACCCGATACCCATTAGG+CGG - chr7.2:29657307-29657326 None:intergenic 55.0%
GGAAGACACGAATCTGCTGC+TGG - chr7.2:29659897-29659916 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG - chr7.2:29658626-29658645 None:intergenic 55.0%
GGTGGATCATATGCCGTGTG+AGG + chr7.2:29657186-29657205 MS.gene27640:CDS 55.0%
TCATCTCCGGTCCTCCTGTT+CGG + chr7.2:29659769-29659788 MS.gene27640:CDS 55.0%
TCCTGTTTAGCCCACCGAAC+AGG - chr7.2:29659786-29659805 None:intergenic 55.0%
TGAGGCTTGTCCTGCAAGTG+AGG + chr7.2:29657165-29657184 MS.gene27640:CDS 55.0%
TGCTGACAGGAAAGGTCACC+AGG + chr7.2:29659147-29659166 MS.gene27640:CDS 55.0%
TGTTTAGCCCACCGAACAGG+AGG - chr7.2:29659783-29659802 None:intergenic 55.0%
TTCCTCCTCGGATCCTCACA+CGG - chr7.2:29657202-29657221 None:intergenic 55.0%
! AGTTAGCCTCTCTGGCCACT+TGG - chr7.2:29660185-29660204 None:intergenic 55.0%
! CGTGTGTTGGTGCGTTTCCA+TGG - chr7.2:29656965-29656984 None:intergenic 55.0%
! GATCGAATTTTGCGGCCGGA+GGG + chr7.2:29661683-29661702 MS.gene27640:CDS 55.0%
! GTGTTGGTGCGTTTCCATGG+TGG - chr7.2:29656962-29656981 None:intergenic 55.0%
! GTTAGCCTCTCTGGCCACTT+GGG - chr7.2:29660184-29660203 None:intergenic 55.0%
! TCCACCGCCTAATGGGTATC+GGG + chr7.2:29657300-29657319 MS.gene27640:CDS 55.0%
! TGATCGAATTTTGCGGCCGG+AGG + chr7.2:29661682-29661701 MS.gene27640:CDS 55.0%
!! GCCTAATGGGTATCGGGTTC+CGG + chr7.2:29657306-29657325 MS.gene27640:CDS 55.0%
!! TCCTGTTCGGTGGGCTAAAC+AGG + chr7.2:29659782-29659801 MS.gene27640:CDS 55.0%
ACAAGGCCTTTGCCACAGCC+TGG - chr7.2:29659827-29659846 None:intergenic 60.0%
ACAGCGCAACCGTCTTGTGG+TGG + chr7.2:29657108-29657127 MS.gene27640:CDS 60.0%
ACAGGAAAGGTCACCAGGGG+TGG + chr7.2:29659152-29659171 MS.gene27640:CDS 60.0%
ACCCGATACCCATTAGGCGG+TGG - chr7.2:29657304-29657323 None:intergenic 60.0%
CATGGGATGTGGGGTAAGCG+AGG + chr7.2:29659306-29659325 MS.gene27640:intron 60.0%
GCGCTGTTGTGGATCAACGG+TGG - chr7.2:29657095-29657114 None:intergenic 60.0%
GGCTTGTCCTGCAAGTGAGG+TGG + chr7.2:29657168-29657187 MS.gene27640:CDS 60.0%
TCCTTTGCCGGAGGAGACTG+CGG + chr7.2:29657267-29657286 MS.gene27640:CDS 60.0%
TTCAGGAGAGGGGACCTCGA+AGG - chr7.2:29660214-29660233 None:intergenic 60.0%
!! ATGGGTATCGGGTTCCGGTG+AGG + chr7.2:29657311-29657330 MS.gene27640:CDS 60.0%
ACCGCAGTCTCCTCCGGCAA+AGG - chr7.2:29657271-29657290 None:intergenic 65.0%
AGCCCACCGAACAGGAGGAC+CGG - chr7.2:29659778-29659797 None:intergenic 65.0%
CTCCGGTCCTCCTGTTCGGT+GGG + chr7.2:29659773-29659792 MS.gene27640:CDS 65.0%
GAGAGGGGACCTCGAAGGTG+CGG - chr7.2:29660209-29660228 None:intergenic 65.0%
GGCTAACTGCCGCACCTTCG+AGG + chr7.2:29660197-29660216 MS.gene27640:CDS 65.0%
TCTCCGGTCCTCCTGTTCGG+TGG + chr7.2:29659772-29659791 MS.gene27640:CDS 65.0%
TGCCGTGTGAGGATCCGAGG+AGG + chr7.2:29657197-29657216 MS.gene27640:CDS 65.0%
! GGTATCGGGTTCCGGTGAGG+TGG + chr7.2:29657314-29657333 MS.gene27640:CDS 65.0%
! GGTGCGGCAGTTAGCCTCTC+TGG - chr7.2:29660193-29660212 None:intergenic 65.0%
CAGCACACGGCGGCGACCAA+GGG - chr7.2:29657065-29657084 None:intergenic 70.0%
CGGTGGACGGAGCCAGCACA+CGG - chr7.2:29657078-29657097 None:intergenic 70.0%
GCGGCCGGAGGGAACTGTTG+TGG + chr7.2:29661694-29661713 MS.gene27640:CDS 70.0%
TGGACGGAGCCAGCACACGG+CGG - chr7.2:29657075-29657094 None:intergenic 70.0%
CACACGGCGGCGACCAAGGG+TGG - chr7.2:29657062-29657081 None:intergenic 75.0%
CCAGCACACGGCGGCGACCA+AGG - chr7.2:29657066-29657085 None:intergenic 75.0%
CCTTGGTCGCCGCCGTGTGC+TGG + chr7.2:29657063-29657082 MS.gene27640:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 29656941 29661859 29656941 ID=MS.gene27640
chr7.2 mRNA 29656941 29661859 29656941 ID=MS.gene27640.t1;Parent=MS.gene27640
chr7.2 exon 29656941 29657354 29656941 ID=MS.gene27640.t1.exon1;Parent=MS.gene27640.t1
chr7.2 CDS 29656941 29657354 29656941 ID=cds.MS.gene27640.t1;Parent=MS.gene27640.t1
chr7.2 exon 29659115 29659318 29659115 ID=MS.gene27640.t1.exon2;Parent=MS.gene27640.t1
chr7.2 CDS 29659115 29659318 29659115 ID=cds.MS.gene27640.t1;Parent=MS.gene27640.t1
chr7.2 exon 29659415 29659625 29659415 ID=MS.gene27640.t1.exon3;Parent=MS.gene27640.t1
chr7.2 CDS 29659415 29659625 29659415 ID=cds.MS.gene27640.t1;Parent=MS.gene27640.t1
chr7.2 exon 29659715 29659976 29659715 ID=MS.gene27640.t1.exon4;Parent=MS.gene27640.t1
chr7.2 CDS 29659715 29659976 29659715 ID=cds.MS.gene27640.t1;Parent=MS.gene27640.t1
chr7.2 exon 29660111 29660485 29660111 ID=MS.gene27640.t1.exon5;Parent=MS.gene27640.t1
chr7.2 CDS 29660111 29660485 29660111 ID=cds.MS.gene27640.t1;Parent=MS.gene27640.t1
chr7.2 exon 29660957 29661052 29660957 ID=MS.gene27640.t1.exon6;Parent=MS.gene27640.t1
chr7.2 CDS 29660957 29661052 29660957 ID=cds.MS.gene27640.t1;Parent=MS.gene27640.t1
chr7.2 exon 29661652 29661859 29661652 ID=MS.gene27640.t1.exon7;Parent=MS.gene27640.t1
chr7.2 CDS 29661652 29661859 29661652 ID=cds.MS.gene27640.t1;Parent=MS.gene27640.t1
Gene Sequence

>MS.gene27640

ATGCGTCACTCAAATTTCCCACCATGGAAACGCACCAACACACGTCAATGGCGTCTCATCGACCTCATTTCCATTGCCTTTTTCTCATTACTCTTTCTCTTCTTTGTTCTCTTTTACACCACCCTTGGTCGCCGCCGTGTGCTGGCTCCGTCCACCGTTGATCCACAACAGCGCAACCGTCTTGTGGTGGCTATTGAGGAAGGGATGTTAAATGGGAAGAGTATTGAGGCTTGTCCTGCAAGTGAGGTGGATCATATGCCGTGTGAGGATCCGAGGAGGAATAGTCAGTTGAGTAGAGAGATGAATTACTATAGGGAGAGACATTGTCCTTTGCCGGAGGAGACTGCGGTTTGTTTGATTCCACCGCCTAATGGGTATCGGGTTCCGGTGAGGTGGCCTGAAAGCATGCATAAGGTGTGGTGTAGTTTTTTGGAAAGTTGGTTAATGTTTAGTTGCTTGTTTTAACTTTTAATTTTAACTGTAATACTTTGTTATCTACGTAGCACTCATGTACTTAAAAGCGTGTTTGGTGTCTGACACATGTGAGTGTCTGACATAGTGACACTGACACACGTGGTTACATGCAATTCCCTTGATTTGAAAAACCACACGTTTACCTGCATCAATTGTTTTTGGTAATCGATTTGACATCAGTTGACTCACATTACACGTTTGCCATATCATCTTTAAATACTGTTTATTTGAGATCGGACGACAAAGATCAATAAAGTGTTGCAGTAGCGGAGAATAAAGTAAGCGTAGCGGAGATGATGTTGCCTTGGATGTATGGTAAGACCATTTGGGAGGGAATTAGAAATTACAACATTAGAGAGGGAGTTGGAGTAGCACCTTGAGTAGAAAAGATGGTGGAAAATAGACTTAGGTGGTTTGGGAGTGTAAAGAGAAGACCTGTAGATTGTGTAGTAAGGAGAGTAGATCAGATGGAGGATAGTCAAATCACTAGAGGTAGAGGAAGACCTAGAAAAACTATAAGAGAAACTATTAGGAAAGATTTAGAGATTAATGAGTTGGATGCAAATGTGGTTTATGATAGAACATTATGCCGTAATTTGATCCATGTAGCCGACTCCACTTAGTGGGATAAGGCTTGGTTGTTGTTGAAAGAACAAAATTTAAAAACTGTTGTGTAGGGGTTGTTTATACTGTTAACCAATTATAAAATGCCATGGAGATTAAAATTTTCATTTGATATTAAATTGATAATGGTCATATTTATACTGTTGAATATATAATACCATTCTCAAAACATAAGGATACACATCTAAGTTTTGTTTAAGTAGAAACTAGATTGTCTCAATTTTTTCAGAAGCTCTCACATTTATCTCGCGTACAAGTACCTTTAAATTTAGAGGTATTTTCCAGGATTGAAGATCAATCTTATTTTAACTGAGAAGCTACTGCAATGAGGGCAAGATAGTGAAAATGGTAGACATGATGCATTATTGGACACTGGTGGTTTTGATTTATGTTGCAGACTTCATATATGGAAGAAGAATTCAGCTGTTGTCTTATTGTTGCTATTATGGTTGTGGTGCCTTGTTATGTAACTTGGAGGGAGTTATTGTGTTTTGTGAAGGACTTAGGAGCTTGTTTTTGTGGATTTTTTTTGTTTAGAATGGGATAGTGCTGTATGTTTGGGTTGTATTTACTGGCATCTACTCCCTCCGTCCCTTAATGTAACCCCCCTTTGCTTTTTTCACATTTCTTAAGAAAAGTTGTCGGTGTAATTAATGTGTCTGTTTTGTGTATTAATATTACCAAATTGTCCTTTGTTTGTATGTGTAATAAATTTGATTGTTCATATTTCAAGACAAATTAGTAGTATTAATTAGGGGTATGTTTAGGAAAAAAGTAATAAATGCATCTAGTATTTTGAAAAGGAGTTTACATTTAGGGACAAAAATAAAATCAAATGGGTGTTTAGATATAGGGACGGAGGGAGTAGTTTACAGTGTGATGAAATTGAGATGAGGTGAGAATGTGAAGCCAAATTAGGATTCAATTTGTAGTGCAATGAAATTAATATAGAGGTGATAGGCTGATGGAATGGCAAGAGAGACATTAATCGATTGATTCATCTGCTCTTGGAATGTTGATATTTGTACTCTTTTATTTATCTGTCTTAATGCATTAATATAATATGTTTTGTGCAGATATGGCATAGCAACATGCCCCACAACAAGATTGCTGACAGGAAAGGTCACCAGGGGTGGATGAAACGAGAAGGTCAACACTTTATATTCCCCGGTGGTGGTACGATGTTTCCAGATGGAGCAGAACAATATATCAAAAAACTTAGTCAATACATTCCCATAAATGGAGGTGTTCTGAGGACTGCACTTGACATGGGATGTGGGGTAAGCGAGGTTTTCCTCTTTACTTTTTAAACCTTATACTAGAATTGATCACTGTTTAACATTCAAATACATCCATTTTACTCCATTTTACTTCAGGTTGCTAGTTTTGGAGGATATTTACTAGCTCAAGATATTTTAACCATGTCTTTTGCTCCAAGAGATTCACATAAATCGCAGATACAATTTGCCTTGGAAAGAGGAATACCGGCTTTTGTTGCTATGCTTGGCACTCAAAGACTTCCATTTCCTGCTTTTGGATTTGACTTGGTTCATTGTTCTCGGTGTTTGATACCGTTTACAGCCTACAGTAAGTTCTGCATTGCAGATCGCTACTGCATATTTTCAAATATTCTATATATGCTTGTCACTTCCTTATGCAGAAAATTTACTATGCAGATGCAACTTATTTCATTGAAGTGGATAGATTACTTCGCCCTGGTGGATATCTAGTCATCTCCGGTCCTCCTGTTCGGTGGGCTAAACAGGAAAAAGAATGGTCAGATCTCCAGGCTGTGGCAAAGGCCTTGTGTTATGAACAGATAACTGTACATGAAAACACTGCAATCTGGAAGAAGCCAGCAGCAGATTCGTGTCTTCCTAATGGAAATGAGTTTGGTCTTGAATTATGTGATGATTCTGGGGACCTAAGTCAAGCTTGGTAAATTTCCTTTGATTATCTTTGCATCTCTTCTTGTCTTGTATAGTTGTTTAACACTTCAATGAATGCTGAGATTGTGAAAATATCTCTTATTAATTACTTAAAATTGCAAAACTAAGATGATCATTTTGCAGGTACTTTAAATTGAAGAGATGTGTAAGTAGTACGTCGTCTATCAAAGGAGATTATGCTATTGGAACAATTCCCAAGTGGCCAGAGAGGCTAACTGCCGCACCTTCGAGGTCCCCTCTCCTGAAAACCGGTGTTGATGTATATGAGGCTGACACTAAGCTGTGGGTACGGAGGGTTGCACATTATAAGAATTCACTAAATATAAAGTTGGGGACTCCATCAATACGCAACGTTATGGACATGAATGCATTATATGGGGGTTTTGCAGCTGCCTTAAAATCTGATCCTGTGTGGGTGATGAATGTAGTTCCAGCTCAAAAGCCACCAACTCTTGATGCGATCTTTGACAGAGGACTTATTGGTGTCTATCATGATTGGTGAGTTTTTGCTGAAAGTTCATGCATCTTCTCTTAAAGGGATTATTTTCCAGAAACATTAGGGTTGTGATCTTATGGCCTATATCTTAATACTTGGCAAAGCAAACTTCCATTTTTCCTTGCAGACATGATTTTAAAATAAGATATGTGGTGGAAAATTTGTGTATTGCATGTAATGATAATTGTCTTGAGTTGCTTTCATGATACTTACGGCTTTACTTTACTTTTCTTTTTTTTTTTTTTTTGGCAATTACAACTCATATATATCATGTGAATGTGTGGTAGATGTTCTTGTAAGTGAAAAGTAATGAACTTATGCTCTCAGATTGTATTTTTAATTTTTAATCTGGATGCGGTTCGGATATTTGTCAATTTTATTTATTTATTTAGTGCATTTGAACTTGTATATCCATTTGTATCGTAATGGATGTATTTTCTTGGAGAATCTAAGTTGTATGGTTTTGTTCCCAGGTGTGAACCTTTTTCAACATACCCTCGAACTTATGATCTGATCCATGTGGCCAGCATTGAATCACTTATAAAAGATCCAGCTACTGGTAAAAAAAGGTATTTTTCTTGTTAAACTGCTAATCTGATGTCACATCTCTAGGTTACCTAAGCTGTTATTCTATCGATTTAAGAGATCTTTTTTATCGTAACAAGACTTGACCTTTATAGATCTCGACAATTTGATTGAATTCCTAAATTGAAAAACTCTACTAATTTTTTTTTTACAGATATTTGAGAGATTGCTGCTTGAACTAAGTTGCACATATTAATTTTCTAAATTTGTAGTTGAAATTCTACAATATTTCTTGGAAGTTTTGCCTGTGCTGCTTCTTTGAAACATTAATTCACTATGATTAACTTTTTAATGTGAAAATGAATGTTTATATCGTTAACTTGAATTTAAATGTCTGAAACTTTATAAATGTAAAAAATATGGTTTACTTTTGCTATGAGGTTACATTATTCTAAATAGTGAGTATGTAGAGTTTGAATCAGTGCAAGGTATTTGATGTTCAATGGTTTCCTCCTATTAGATTCATGTCAAACCGCAACTTACAGCAACAGCCTCTAGGCTAAAGCAAATTTTATTTTTTTACCTTGCTTTAATCATTGATGTTTTGTGTCCTCAACCTGATTTCTTCACAATTTCATTGTAGATGTAATATTGTTGATTTGATGGTGGAAATTGATCGAATTTTGCGGCCGGAGGGAACTGTTGTGGTAAGAGATGCTCCCGAAGTAATTGACAAAGTAGCGCGAATTTCTCATGCGGTGAGGTGGAAGCCGACCATTTATGATAAAGAACCTGACTCACACGGCAGAGAAAAAATTCTAGTTTTGACCAAGACCTTATGGAAGCTCTAA
Protein sequence

>MS.gene27640.t1

MRHSNFPPWKRTNTRQWRLIDLISIAFFSLLFLFFVLFYTTLGRRRVLAPSTVDPQQRNRLVVAIEEGMLNGKSIEACPASEVDHMPCEDPRRNSQLSREMNYYRERHCPLPEETAVCLIPPPNGYRVPVRWPESMHKIWHSNMPHNKIADRKGHQGWMKREGQHFIFPGGGTMFPDGAEQYIKKLSQYIPINGGVLRTALDMGCGVASFGGYLLAQDILTMSFAPRDSHKSQIQFALERGIPAFVAMLGTQRLPFPAFGFDLVHCSRCLIPFTAYNATYFIEVDRLLRPGGYLVISGPPVRWAKQEKEWSDLQAVAKALCYEQITVHENTAIWKKPAADSCLPNGNEFGLELCDDSGDLSQAWYFKLKRCVSSTSSIKGDYAIGTIPKWPERLTAAPSRSPLLKTGVDVYEADTKLWVRRVAHYKNSLNIKLGTPSIRNVMDMNALYGGFAAALKSDPVWVMNVVPAQKPPTLDAIFDRGLIGVYHDWCEPFSTYPRTYDLIHVASIESLIKDPATGKKRCNIVDLMVEIDRILRPEGTVVVRDAPEVIDKVARISHAVRWKPTIYDKEPDSHGREKILVLTKTLWKL