Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061967.t1 | XP_013451575.1 | 94.6 | 334 | 17 | 1 | 11 | 343 | 8 | 341 | 7.60E-185 | 656.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061967.t1 | Q9FK51 | 64.0 | 331 | 115 | 3 | 15 | 343 | 22 | 350 | 1.9e-128 | 460.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061967.t1 | A0A072U914 | 94.6 | 334 | 17 | 1 | 11 | 343 | 8 | 341 | 5.5e-185 | 656.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049350 | MS.gene061967 | -0.804374 | 2.23E-49 | -1.69E-46 |
MS.gene049850 | MS.gene061967 | -0.808949 | 2.41E-50 | -1.69E-46 |
MS.gene051744 | MS.gene061967 | -0.823895 | 1.08E-53 | -1.69E-46 |
MS.gene051848 | MS.gene061967 | 0.802112 | 6.55E-49 | -1.69E-46 |
MS.gene052519 | MS.gene061967 | -0.830147 | 3.46E-55 | -1.69E-46 |
MS.gene05423 | MS.gene061967 | -0.810844 | 9.42E-51 | -1.69E-46 |
MS.gene054651 | MS.gene061967 | -0.824776 | 6.72E-54 | -1.69E-46 |
MS.gene055589 | MS.gene061967 | -0.803714 | 3.06E-49 | -1.69E-46 |
MS.gene055818 | MS.gene061967 | -0.803415 | 3.52E-49 | -1.69E-46 |
MS.gene056699 | MS.gene061967 | -0.800691 | 1.28E-48 | -1.69E-46 |
MS.gene057102 | MS.gene061967 | -0.809246 | 2.08E-50 | -1.69E-46 |
MS.gene057208 | MS.gene061967 | -0.808279 | 3.35E-50 | -1.69E-46 |
MS.gene058159 | MS.gene061967 | -0.810517 | 1.11E-50 | -1.69E-46 |
MS.gene05985 | MS.gene061967 | 0.80953 | 1.81E-50 | -1.69E-46 |
MS.gene060777 | MS.gene061967 | -0.804665 | 1.94E-49 | -1.69E-46 |
MS.gene061188 | MS.gene061967 | -0.800524 | 1.38E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061967.t1 | MTR_6g029470 | 95.588 | 340 | 14 | 1 | 5 | 343 | 2 | 341 | 0.0 | 664 |
MS.gene061967.t1 | MTR_6g029470 | 94.574 | 258 | 13 | 1 | 5 | 261 | 2 | 259 | 7.57e-178 | 493 |
MS.gene061967.t1 | MTR_6g029530 | 63.112 | 347 | 126 | 1 | 4 | 350 | 142 | 486 | 9.20e-157 | 456 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061967.t1 | AT5G18200 | 63.095 | 336 | 120 | 3 | 10 | 343 | 17 | 350 | 4.77e-164 | 462 |
Find 87 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTGCTCATTTCCATGAAT+TGG | 0.232171 | 6.2:+20822275 | MS.gene061967:CDS |
AATGCGCACCCGAGATATTT+CGG | 0.252180 | 6.2:+20820116 | MS.gene061967:CDS |
AGTTCGGTGTTGGATGGGTT+TGG | 0.297896 | 6.2:+20820241 | MS.gene061967:CDS |
TACGAAGCTGTGGTGAGTTT+TGG | 0.306156 | 6.2:-20819955 | None:intergenic |
TTCCAGTTCGGATTATTATC+TGG | 0.319831 | 6.2:-20820142 | None:intergenic |
GTTCGGTGTTGGATGGGTTT+GGG | 0.323185 | 6.2:+20820242 | MS.gene061967:CDS |
CAGATAGTGCCTCAACTAAT+TGG | 0.326472 | 6.2:+20823600 | MS.gene061967:CDS |
CAGAATTGGCATACAATCAT+TGG | 0.328541 | 6.2:+20823571 | MS.gene061967:CDS |
GCAGCATCCTCAGGGAAAAC+TGG | 0.337155 | 6.2:-20823663 | None:intergenic |
TGATGTGGTGTTGTCTGATT+TGG | 0.356261 | 6.2:+20820297 | MS.gene061967:CDS |
ATGCGCACCCGAGATATTTC+GGG | 0.359923 | 6.2:+20820117 | MS.gene061967:CDS |
ATAATCCGAACTGGAAGATT+CGG | 0.378938 | 6.2:+20820149 | MS.gene061967:CDS |
ACAGACCCCGTTTCATCAAC+CGG | 0.379743 | 6.2:-20820217 | None:intergenic |
CCATGAATTGGATGCTGAAA+AGG | 0.387668 | 6.2:+20822287 | MS.gene061967:CDS |
TCTGTAAGTTCGGTGTTGGA+TGG | 0.389513 | 6.2:+20820235 | MS.gene061967:CDS |
AGAATCTTTGCAGCATCCTC+AGG | 0.393557 | 6.2:-20823672 | None:intergenic |
GCGGGTTTCGAGCTCGCAAC+TGG | 0.404379 | 6.2:+20823627 | MS.gene061967:CDS |
GCAGACCCGGTTGATGAAAC+GGG | 0.404547 | 6.2:+20820211 | MS.gene061967:CDS |
TGATGATTTGGATTTGAAAT+CGG | 0.408535 | 6.2:-20820035 | None:intergenic |
GTTCGTTGCCCTTTCTGTAT+CGG | 0.415234 | 6.2:+20820082 | MS.gene061967:CDS |
ATGTTACAGGCAGTTGATCT+TGG | 0.417966 | 6.2:+20823450 | MS.gene061967:intron |
TGTCTGATTTGGAGAGGGAG+GGG | 0.419011 | 6.2:+20820308 | MS.gene061967:CDS |
AAACTCTATCAAATATGTTC+AGG | 0.420894 | 6.2:+20820384 | MS.gene061967:CDS |
CCAAGACGGGCTGAAACATT+AGG | 0.431537 | 6.2:-20822099 | None:intergenic |
TGCAGACCCGGTTGATGAAA+CGG | 0.436349 | 6.2:+20820210 | MS.gene061967:CDS |
GTGATAGGATTCGTGAGCTT+GGG | 0.442215 | 6.2:+20820356 | MS.gene061967:CDS |
GCATGGCGATGAGTCAGAAT+TGG | 0.451891 | 6.2:+20823557 | MS.gene061967:CDS |
TGTGATAGGATTCGTGAGCT+TGG | 0.455222 | 6.2:+20820355 | MS.gene061967:CDS |
TAATCCGAACTGGAAGATTC+GGG | 0.459200 | 6.2:+20820150 | MS.gene061967:CDS |
ATCTGGCACCCGAAATATCT+CGG | 0.460463 | 6.2:-20820125 | None:intergenic |
GGAACAATCCATATCTCAAA+AGG | 0.462175 | 6.2:-20822243 | None:intergenic |
CTGTAAGTTCGGTGTTGGAT+GGG | 0.462541 | 6.2:+20820236 | MS.gene061967:CDS |
GCAACGAACACCAGTGGGAT+TGG | 0.472736 | 6.2:-20820068 | None:intergenic |
TTGTCTGATTTGGAGAGGGA+GGG | 0.478640 | 6.2:+20820307 | MS.gene061967:CDS |
AGCCCGTCTTGGAAGTATGA+AGG | 0.481150 | 6.2:+20822110 | MS.gene061967:CDS |
GATTTGGAGAGGGAGGGGAT+TGG | 0.483449 | 6.2:+20820313 | MS.gene061967:CDS |
TGCCAGATAATAATCCGAAC+TGG | 0.487552 | 6.2:+20820140 | MS.gene061967:CDS |
CCTAATGTTTCAGCCCGTCT+TGG | 0.487742 | 6.2:+20822099 | MS.gene061967:CDS |
GTTGTCTGATTTGGAGAGGG+AGG | 0.487874 | 6.2:+20820306 | MS.gene061967:CDS |
AAAGGAAATGAAGCGGCATA+AGG | 0.490064 | 6.2:-20822225 | None:intergenic |
TGATGTTGTTATTGAAACTC+CGG | 0.499632 | 6.2:+20820270 | MS.gene061967:CDS |
TGAAACGGGGTCTGTAAGTT+CGG | 0.506441 | 6.2:+20820225 | MS.gene061967:CDS |
GAAACATTAGGTGGAATAAC+GGG | 0.507381 | 6.2:-20822087 | None:intergenic |
ATAACCCGAATCTTCCAGTT+CGG | 0.507418 | 6.2:-20820154 | None:intergenic |
TGAAACATTAGGTGGAATAA+CGG | 0.515108 | 6.2:-20822088 | None:intergenic |
ATCCTTCATACTTCCAAGAC+GGG | 0.518956 | 6.2:-20822112 | None:intergenic |
TTACAGGCAGTTGATCTTGG+AGG | 0.526027 | 6.2:+20823453 | MS.gene061967:intron |
TGTTCGTTGCCGATACAGAA+AGG | 0.529073 | 6.2:-20820091 | None:intergenic |
GACAACACCACATCATGATC+CGG | 0.530034 | 6.2:-20820289 | None:intergenic |
ATCACGCGAACTTGCAGACC+CGG | 0.531989 | 6.2:+20820198 | MS.gene061967:CDS |
AAGACACAATCTTCAACCGT+TGG | 0.537507 | 6.2:+20819978 | MS.gene061967:CDS |
GGAGAGGGAGGGGATTGGTG+AGG | 0.538006 | 6.2:+20820318 | MS.gene061967:CDS |
GTTTGTTGAAACAAATGCTA+AGG | 0.542952 | 6.2:+20823475 | MS.gene061967:CDS |
GCAAGTTCGCGTGATAGAGC+AGG | 0.548770 | 6.2:-20820190 | None:intergenic |
GGGGTCTGTAAGTTCGGTGT+TGG | 0.549390 | 6.2:+20820231 | MS.gene061967:CDS |
CATTAGGTGGAATAACGGGC+AGG | 0.552079 | 6.2:-20822083 | None:intergenic |
ATGCACCAGCTGCAGCGCCA+TGG | 0.552085 | 6.2:-20822029 | None:intergenic |
CCTCAACTAATTGGTACAGC+GGG | 0.556856 | 6.2:+20823609 | MS.gene061967:CDS |
TGGTGTTGTCTGATTTGGAG+AGG | 0.557175 | 6.2:+20820302 | MS.gene061967:CDS |
TCTGGCACCCGAAATATCTC+GGG | 0.564075 | 6.2:-20820124 | None:intergenic |
AAGGATTATTTCGATCAGAC+CGG | 0.566785 | 6.2:+20822129 | MS.gene061967:CDS |
GGTGTTGTCTGATTTGGAGA+GGG | 0.570255 | 6.2:+20820303 | MS.gene061967:CDS |
GTTCGTTGCCGATACAGAAA+GGG | 0.571106 | 6.2:-20820090 | None:intergenic |
TATTTGTGAAATTCAACGTG+AGG | 0.580301 | 6.2:+20822161 | MS.gene061967:CDS |
TGATTTGGATTTGAAATCGG+AGG | 0.586303 | 6.2:-20820032 | None:intergenic |
AATCCTTCATACTTCCAAGA+CGG | 0.586376 | 6.2:-20822113 | None:intergenic |
TCTGACTCATCGCCATGCAG+TGG | 0.591121 | 6.2:-20823552 | None:intergenic |
AGAAGTGAATGTTCCAGAGT+CGG | 0.601184 | 6.2:+20823698 | MS.gene061967:CDS |
GATTTGGATTTGAAATCGGA+GGG | 0.602181 | 6.2:-20820031 | None:intergenic |
CAGACCCCGTTTCATCAACC+GGG | 0.602311 | 6.2:-20820216 | None:intergenic |
GAATCTTTGCAGCATCCTCA+GGG | 0.604054 | 6.2:-20823671 | None:intergenic |
TCATCATCATCCAATCCCAC+TGG | 0.604692 | 6.2:+20820058 | MS.gene061967:CDS |
GTGTGAATCATAAAGTTGAA+CGG | 0.626973 | 6.2:-20823525 | None:intergenic |
ATTAGGTGGAATAACGGGCA+GGG | 0.632534 | 6.2:-20822082 | None:intergenic |
GAAAGGGCAACGAACACCAG+TGG | 0.640523 | 6.2:-20820074 | None:intergenic |
AAAGGGCAACGAACACCAGT+GGG | 0.646174 | 6.2:-20820073 | None:intergenic |
AGACGGGCTGAAACATTAGG+TGG | 0.656037 | 6.2:-20822096 | None:intergenic |
GCCTCAACTAATTGGTACAG+CGG | 0.656139 | 6.2:+20823608 | MS.gene061967:CDS |
CCCGCTGTACCAATTAGTTG+AGG | 0.663084 | 6.2:-20823609 | None:intergenic |
TATCTCAAAAGGAAATGAAG+CGG | 0.665656 | 6.2:-20822232 | None:intergenic |
ATTCACACAAGTCCACTGCA+TGG | 0.668804 | 6.2:+20823540 | MS.gene061967:CDS |
AAATGAGCAGAGTGATATCG+AGG | 0.670405 | 6.2:-20822264 | None:intergenic |
ATTGTGTCTTTACGAAGCTG+TGG | 0.677891 | 6.2:-20819965 | None:intergenic |
CAGACCCGGTTGATGAAACG+GGG | 0.683416 | 6.2:+20820212 | MS.gene061967:CDS |
TGAAACTCCGGATCATGATG+TGG | 0.686786 | 6.2:+20820282 | MS.gene061967:CDS |
CTGGTGAGAAGATAATCCAA+CGG | 0.693199 | 6.2:-20819994 | None:intergenic |
TGAATCATAAAGTTGAACGG+CGG | 0.737571 | 6.2:-20823522 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATAGAATGAAGTATATT+AGG | + | chr6.2:20822997-20823016 | MS.gene061967:intron | 15.0% |
!! | ATATAGAATGAAGTATATTA+GGG | + | chr6.2:20822998-20823017 | MS.gene061967:intron | 15.0% |
!! | AAAAATGAATGAAAACTGTA+TGG | + | chr6.2:20820483-20820502 | MS.gene061967:intron | 20.0% |
!! | AAAATACTAAGCTTGAAATT+TGG | + | chr6.2:20821117-20821136 | MS.gene061967:intron | 20.0% |
!! | GACTTAACAAAATATATTTC+TGG | + | chr6.2:20821514-20821533 | MS.gene061967:intron | 20.0% |
!! | TATAAAATGTTGTCAAATAG+CGG | + | chr6.2:20821833-20821852 | MS.gene061967:intron | 20.0% |
!! | TTTGTTTAATCTATATCCAA+CGG | - | chr6.2:20821061-20821080 | None:intergenic | 20.0% |
!!! | AAATTTCAAGCTTAGTATTT+TGG | - | chr6.2:20821118-20821137 | None:intergenic | 20.0% |
!!! | AGATTTTCAGTTCTTAAAAT+TGG | + | chr6.2:20821452-20821471 | MS.gene061967:intron | 20.0% |
!!! | CTGAAAATCTTATATTTTCA+AGG | - | chr6.2:20821442-20821461 | None:intergenic | 20.0% |
!!! | GAATATAGTTGTAATGATTT+TGG | + | chr6.2:20820416-20820435 | MS.gene061967:intron | 20.0% |
!!! | TAATTTTAGTGTGGTAATTT+TGG | + | chr6.2:20821382-20821401 | MS.gene061967:intron | 20.0% |
!!! | TGTAGTTTTTTTATGCTATT+TGG | + | chr6.2:20820557-20820576 | MS.gene061967:intron | 20.0% |
! | AAACTCTATCAAATATGTTC+AGG | + | chr6.2:20820384-20820403 | MS.gene061967:CDS | 25.0% |
! | AGAAATAATAAGAGCTAGAA+AGG | - | chr6.2:20822592-20822611 | None:intergenic | 25.0% |
! | AGAATTCTGAATAATACAGA+GGG | - | chr6.2:20823034-20823053 | None:intergenic | 25.0% |
! | ATAGACATTCGGTAATAAAA+AGG | - | chr6.2:20823240-20823259 | None:intergenic | 25.0% |
! | ATGGAGTATATACATATTAG+TGG | + | chr6.2:20820926-20820945 | MS.gene061967:intron | 25.0% |
! | CTATGATTATGATAGACATT+CGG | - | chr6.2:20823251-20823270 | None:intergenic | 25.0% |
! | CTTTGCATTTAAGCATTAAT+AGG | - | chr6.2:20822341-20822360 | None:intergenic | 25.0% |
! | TAGACATTCGGTAATAAAAA+GGG | - | chr6.2:20823239-20823258 | None:intergenic | 25.0% |
! | TATTGAATTGAAAGGATGTT+TGG | + | chr6.2:20820758-20820777 | MS.gene061967:intron | 25.0% |
! | TGCTCAATTTGAATATTGTA+AGG | + | chr6.2:20820529-20820548 | MS.gene061967:intron | 25.0% |
! | TTAAGCATTAATAGGACTTT+GGG | - | chr6.2:20822333-20822352 | None:intergenic | 25.0% |
! | TTGAATACTTAGATCTGAAA+TGG | + | chr6.2:20822501-20822520 | MS.gene061967:intron | 25.0% |
! | TTGAGTTCATTAATCTTTGA+AGG | + | chr6.2:20821996-20822015 | MS.gene061967:intron | 25.0% |
! | TTTAAGCATTAATAGGACTT+TGG | - | chr6.2:20822334-20822353 | None:intergenic | 25.0% |
!! | AAATCAAGATTCTTTGAAGA+TGG | - | chr6.2:20821203-20821222 | None:intergenic | 25.0% |
!! | AATCAAGATTCTTTGAAGAT+GGG | - | chr6.2:20821202-20821221 | None:intergenic | 25.0% |
!! | TATAGTTGTAATGATTTTGG+TGG | + | chr6.2:20820419-20820438 | MS.gene061967:intron | 25.0% |
!! | TATTATTTCTCTACATAGCT+CGG | + | chr6.2:20822602-20822621 | MS.gene061967:intron | 25.0% |
!! | TGATGATTTGGATTTGAAAT+CGG | - | chr6.2:20820038-20820057 | None:intergenic | 25.0% |
!! | TGCATTGATATTGAATTGAA+AGG | + | chr6.2:20820750-20820769 | MS.gene061967:intron | 25.0% |
!! | TTCACAAATAGAACATTTTC+CGG | - | chr6.2:20822151-20822170 | None:intergenic | 25.0% |
!!! | AATATATTTCTGGTATGAGA+TGG | + | chr6.2:20821524-20821543 | MS.gene061967:intron | 25.0% |
!!! | CACTATACATAATTTTAGTG+TGG | + | chr6.2:20821373-20821392 | MS.gene061967:intron | 25.0% |
!!! | TTTTTGTTGCTTATTGTGAT+AGG | + | chr6.2:20820341-20820360 | MS.gene061967:CDS | 25.0% |
AAAAAAAGACCTAGCATCTA+AGG | - | chr6.2:20822469-20822488 | None:intergenic | 30.0% | |
AAAAAAGACCTAGCATCTAA+GGG | - | chr6.2:20822468-20822487 | None:intergenic | 30.0% | |
AATAAAAAGGGATCTATGCA+AGG | - | chr6.2:20823227-20823246 | None:intergenic | 30.0% | |
ACATAATGATGACTTGAAAC+AGG | - | chr6.2:20821970-20821989 | None:intergenic | 30.0% | |
AGTACAACTGTTATCAGATA+AGG | - | chr6.2:20822897-20822916 | None:intergenic | 30.0% | |
ATAAAAAGGGATCTATGCAA+GGG | - | chr6.2:20823226-20823245 | None:intergenic | 30.0% | |
CCAGAACTACTATAAATATG+GGG | - | chr6.2:20822714-20822733 | None:intergenic | 30.0% | |
CCCAGAACTACTATAAATAT+GGG | - | chr6.2:20822715-20822734 | None:intergenic | 30.0% | |
CCCATATTTATAGTAGTTCT+GGG | + | chr6.2:20822712-20822731 | MS.gene061967:intron | 30.0% | |
GAATTCTGAATAATACAGAG+GGG | - | chr6.2:20823033-20823052 | None:intergenic | 30.0% | |
GAGAATTCTGAATAATACAG+AGG | - | chr6.2:20823035-20823054 | None:intergenic | 30.0% | |
GCTATAACACTATTGTATAG+TGG | + | chr6.2:20821855-20821874 | MS.gene061967:intron | 30.0% | |
GTACACGTTCAATATTATTG+TGG | + | chr6.2:20821406-20821425 | MS.gene061967:intron | 30.0% | |
GTATTCCTTCTTTGATTACA+CGG | - | chr6.2:20823062-20823081 | None:intergenic | 30.0% | |
GTGTAATCAAAGAAGGAATA+CGG | + | chr6.2:20823061-20823080 | MS.gene061967:intron | 30.0% | |
GTGTGAATCATAAAGTTGAA+CGG | - | chr6.2:20823528-20823547 | None:intergenic | 30.0% | |
TAATCATAGTAGATTGCTAC+AGG | + | chr6.2:20823262-20823281 | MS.gene061967:intron | 30.0% | |
TATCTCAAAAGGAAATGAAG+CGG | - | chr6.2:20822235-20822254 | None:intergenic | 30.0% | |
TATTCTGAATCACATCTAAG+AGG | - | chr6.2:20821680-20821699 | None:intergenic | 30.0% | |
TATTTGTGAAATTCAACGTG+AGG | + | chr6.2:20822161-20822180 | MS.gene061967:CDS | 30.0% | |
TCCCAGAACTACTATAAATA+TGG | - | chr6.2:20822716-20822735 | None:intergenic | 30.0% | |
TGAAACATTAGGTGGAATAA+CGG | - | chr6.2:20822091-20822110 | None:intergenic | 30.0% | |
TGGATACTATATATTGCACA+TGG | - | chr6.2:20820882-20820901 | None:intergenic | 30.0% | |
TGTGGATCTTGGAATTATTA+TGG | + | chr6.2:20821702-20821721 | MS.gene061967:intron | 30.0% | |
! | ATCGACATACTTCTTTTCAT+TGG | + | chr6.2:20822200-20822219 | MS.gene061967:CDS | 30.0% |
! | ATGACAAAATGTGCAGATTT+TGG | + | chr6.2:20821080-20821099 | MS.gene061967:intron | 30.0% |
! | GAAGATGAGTGTTATGATTT+TGG | + | chr6.2:20822439-20822458 | MS.gene061967:intron | 30.0% |
! | GCATTAGTGTTGTTAAATAG+CGG | + | chr6.2:20821753-20821772 | MS.gene061967:intron | 30.0% |
! | GCTATTCTTTTGACAAAGAA+CGG | - | chr6.2:20822551-20822570 | None:intergenic | 30.0% |
! | GTTTGTTGAAACAAATGCTA+AGG | + | chr6.2:20823475-20823494 | MS.gene061967:CDS | 30.0% |
! | TGATGTTGTTATTGAAACTC+CGG | + | chr6.2:20820270-20820289 | MS.gene061967:CDS | 30.0% |
!! | AACAGAAGCATAAAAGTATC+AGG | - | chr6.2:20823149-20823168 | None:intergenic | 30.0% |
!! | TTGAAGGTGTTTAAAAACCA+TGG | + | chr6.2:20822012-20822031 | MS.gene061967:intron | 30.0% |
!!! | AATGTGCAGATTTTGGTTTT+TGG | + | chr6.2:20821087-20821106 | MS.gene061967:intron | 30.0% |
!!! | AGATGCTAGGTCTTTTTTTA+GGG | + | chr6.2:20822470-20822489 | MS.gene061967:intron | 30.0% |
!!! | CTTCATTTCCTTTTGAGATA+TGG | + | chr6.2:20822235-20822254 | MS.gene061967:CDS | 30.0% |
!!! | GAAAGTTTTATTCTCTTGGA+TGG | - | chr6.2:20821592-20821611 | None:intergenic | 30.0% |
!!! | TAGATGCTAGGTCTTTTTTT+AGG | + | chr6.2:20822469-20822488 | MS.gene061967:intron | 30.0% |
AAGGATTATTTCGATCAGAC+CGG | + | chr6.2:20822129-20822148 | MS.gene061967:CDS | 35.0% | |
AATCCTTCATACTTCCAAGA+CGG | - | chr6.2:20822116-20822135 | None:intergenic | 35.0% | |
AATTCAAGATGTCTGTGCAT+TGG | + | chr6.2:20821032-20821051 | MS.gene061967:intron | 35.0% | |
ACTCCATATCTATTGAACAC+CGG | - | chr6.2:20820913-20820932 | None:intergenic | 35.0% | |
AGAGTTCTCCAATAAATGTG+AGG | + | chr6.2:20822635-20822654 | MS.gene061967:intron | 35.0% | |
ATAACGACATGTTCAAACTC+AGG | - | chr6.2:20822795-20822814 | None:intergenic | 35.0% | |
ATAATCCGAACTGGAAGATT+CGG | + | chr6.2:20820149-20820168 | MS.gene061967:CDS | 35.0% | |
ATCAGATAAGGAGAACTCAA+AGG | - | chr6.2:20822885-20822904 | None:intergenic | 35.0% | |
CACAATACATGGGTAAACAT+TGG | - | chr6.2:20821159-20821178 | None:intergenic | 35.0% | |
CAGAATTGGCATACAATCAT+TGG | + | chr6.2:20823571-20823590 | MS.gene061967:CDS | 35.0% | |
CCCCATATTTATAGTAGTTC+TGG | + | chr6.2:20822711-20822730 | MS.gene061967:intron | 35.0% | |
GAAACATTAGGTGGAATAAC+GGG | - | chr6.2:20822090-20822109 | None:intergenic | 35.0% | |
GAGTTCTCCAATAAATGTGA+GGG | + | chr6.2:20822636-20822655 | MS.gene061967:intron | 35.0% | |
GATGTGATTCAGAATAGTTG+TGG | + | chr6.2:20821684-20821703 | MS.gene061967:intron | 35.0% | |
GGAACAATCCATATCTCAAA+AGG | - | chr6.2:20822246-20822265 | None:intergenic | 35.0% | |
TAAGAGCTAGAAAGGAGAAA+AGG | - | chr6.2:20822584-20822603 | None:intergenic | 35.0% | |
TATAGTATCCATGTTTGTGC+CGG | + | chr6.2:20820891-20820910 | MS.gene061967:intron | 35.0% | |
TATCCTATAGCAATACCAGA+AGG | - | chr6.2:20823334-20823353 | None:intergenic | 35.0% | |
TATCTCGACATCTATGTTAC+AGG | + | chr6.2:20823437-20823456 | MS.gene061967:intron | 35.0% | |
TCAAAGGTGAAACCATAACT+CGG | - | chr6.2:20822869-20822888 | None:intergenic | 35.0% | |
TCAACCATAGCATTCTTCTT+CGG | - | chr6.2:20822740-20822759 | None:intergenic | 35.0% | |
TGAATCATAAAGTTGAACGG+CGG | - | chr6.2:20823525-20823544 | None:intergenic | 35.0% | |
TGTGCATATAAATGAAGCAC+AGG | - | chr6.2:20821355-20821374 | None:intergenic | 35.0% | |
TTAACAACACTAATGCGCAA+TGG | - | chr6.2:20821749-20821768 | None:intergenic | 35.0% | |
TTAATGAAACCACGTATGTC+CGG | - | chr6.2:20821251-20821270 | None:intergenic | 35.0% | |
TTCAGAATAGTTGTGGATCT+TGG | + | chr6.2:20821691-20821710 | MS.gene061967:intron | 35.0% | |
TTCCAGTTCGGATTATTATC+TGG | - | chr6.2:20820145-20820164 | None:intergenic | 35.0% | |
TTGCAGATCACAGAAAATAG+CGG | - | chr6.2:20821893-20821912 | None:intergenic | 35.0% | |
TTGTTAAGCTTGACACTGTT+TGG | + | chr6.2:20821483-20821502 | MS.gene061967:intron | 35.0% | |
! | ACTTAGATCTGAAATGGTGT+TGG | + | chr6.2:20822507-20822526 | MS.gene061967:intron | 35.0% |
! | GATTTGGATTTGAAATCGGA+GGG | - | chr6.2:20820034-20820053 | None:intergenic | 35.0% |
! | GGATGATGATGATGATGATT+TGG | - | chr6.2:20820050-20820069 | None:intergenic | 35.0% |
! | TATGGTTGAAGCATTCTGAT+TGG | + | chr6.2:20822751-20822770 | MS.gene061967:intron | 35.0% |
! | TGATTTGGATTTGAAATCGG+AGG | - | chr6.2:20820035-20820054 | None:intergenic | 35.0% |
! | TTCTGGTTAGGAGAGAAAAA+GGG | - | chr6.2:20823104-20823123 | None:intergenic | 35.0% |
!! | AGAAGCATAAAAGTATCAGG+AGG | - | chr6.2:20823146-20823165 | None:intergenic | 35.0% |
!! | GTCATTTTGAGTGTCATATC+CGG | + | chr6.2:20821321-20821340 | MS.gene061967:intron | 35.0% |
!! | TTTCTGGTTAGGAGAGAAAA+AGG | - | chr6.2:20823105-20823124 | None:intergenic | 35.0% |
!!! | GATGCTAGGTCTTTTTTTAG+GGG | + | chr6.2:20822471-20822490 | MS.gene061967:intron | 35.0% |
!!! | GGGAGAAAGTTTTATTCTCT+TGG | - | chr6.2:20821596-20821615 | None:intergenic | 35.0% |
!!! | TGGTGAGTTTTGGTTTTTTG+AGG | - | chr6.2:20819948-20819967 | None:intergenic | 35.0% |
AAAGGAAATGAAGCGGCATA+AGG | - | chr6.2:20822228-20822247 | None:intergenic | 40.0% | |
AAATATGGGGAAAAACTCCC+AGG | - | chr6.2:20822701-20822720 | None:intergenic | 40.0% | |
AAATGAGCAGAGTGATATCG+AGG | - | chr6.2:20822267-20822286 | None:intergenic | 40.0% | |
AAGACACAATCTTCAACCGT+TGG | + | chr6.2:20819978-20819997 | MS.gene061967:CDS | 40.0% | |
AAGGAGAAAAGGAGGAAGAA+AGG | - | chr6.2:20822573-20822592 | None:intergenic | 40.0% | |
ACTCATGCAGTCACAATACA+TGG | - | chr6.2:20821170-20821189 | None:intergenic | 40.0% | |
AGAAGTGAATGTTCCAGAGT+CGG | + | chr6.2:20823698-20823717 | MS.gene061967:CDS | 40.0% | |
ATAACCCGAATCTTCCAGTT+CGG | - | chr6.2:20820157-20820176 | None:intergenic | 40.0% | |
ATCCTTCATACTTCCAAGAC+GGG | - | chr6.2:20822115-20822134 | None:intergenic | 40.0% | |
ATGATGACTTGAAACAGGTG+CGG | - | chr6.2:20821965-20821984 | None:intergenic | 40.0% | |
ATGTTACAGGCAGTTGATCT+TGG | + | chr6.2:20823450-20823469 | MS.gene061967:intron | 40.0% | |
ATTGTGACTGCATGAGTTCA+GGG | + | chr6.2:20821173-20821192 | MS.gene061967:intron | 40.0% | |
ATTGTGTCTTTACGAAGCTG+TGG | - | chr6.2:20819968-20819987 | None:intergenic | 40.0% | |
CAAAACTGGCACAGAAAAGA+AGG | + | chr6.2:20822970-20822989 | MS.gene061967:intron | 40.0% | |
CACTAATGCGCAATGGAAAT+AGG | - | chr6.2:20821742-20821761 | None:intergenic | 40.0% | |
CAGATAGTGCCTCAACTAAT+TGG | + | chr6.2:20823600-20823619 | MS.gene061967:CDS | 40.0% | |
CAGTTCGGTAGATTCAAAAC+TGG | + | chr6.2:20822956-20822975 | MS.gene061967:intron | 40.0% | |
CCATGAATTGGATGCTGAAA+AGG | + | chr6.2:20822287-20822306 | MS.gene061967:CDS | 40.0% | |
CCTTAATCTATGCGTGACAT+GGG | - | chr6.2:20822392-20822411 | None:intergenic | 40.0% | |
CTCATGCAGTCACAATACAT+GGG | - | chr6.2:20821169-20821188 | None:intergenic | 40.0% | |
CTCTGCTCATTTCCATGAAT+TGG | + | chr6.2:20822275-20822294 | MS.gene061967:CDS | 40.0% | |
CTGATCCGTGTAATCAAAGA+AGG | + | chr6.2:20823054-20823073 | MS.gene061967:intron | 40.0% | |
CTGGTGAGAAGATAATCCAA+CGG | - | chr6.2:20819997-20820016 | None:intergenic | 40.0% | |
GAACCTTCTGGTATTGCTAT+AGG | + | chr6.2:20823328-20823347 | MS.gene061967:intron | 40.0% | |
GCACAGACATCTTGAATTCA+GGG | - | chr6.2:20821030-20821049 | None:intergenic | 40.0% | |
GGTATCAACCCACATATCAA+GGG | - | chr6.2:20822848-20822867 | None:intergenic | 40.0% | |
GTATCAACCCACATATCAAG+GGG | - | chr6.2:20822847-20822866 | None:intergenic | 40.0% | |
TAATCCGAACTGGAAGATTC+GGG | + | chr6.2:20820150-20820169 | MS.gene061967:CDS | 40.0% | |
TAGTAGATTGCTACAGGTTG+TGG | + | chr6.2:20823268-20823287 | MS.gene061967:intron | 40.0% | |
TATTGTGACTGCATGAGTTC+AGG | + | chr6.2:20821172-20821191 | MS.gene061967:intron | 40.0% | |
TCCAATAAATGTGAGGGAGA+GGG | + | chr6.2:20822642-20822661 | MS.gene061967:intron | 40.0% | |
TGATCTGCAATTGACAACAC+TGG | + | chr6.2:20821903-20821922 | MS.gene061967:intron | 40.0% | |
TGCACAGACATCTTGAATTC+AGG | - | chr6.2:20821031-20821050 | None:intergenic | 40.0% | |
TGCCAGATAATAATCCGAAC+TGG | + | chr6.2:20820140-20820159 | MS.gene061967:CDS | 40.0% | |
TGTCTAACATGTATCTGTGC+CGG | + | chr6.2:20821229-20821248 | MS.gene061967:intron | 40.0% | |
TTCCAGAGTCGGAACAAAAA+AGG | + | chr6.2:20823709-20823728 | MS.gene061967:CDS | 40.0% | |
TTCGTCTTGAAGACGAATAG+TGG | + | chr6.2:20820984-20821003 | MS.gene061967:intron | 40.0% | |
TTGAATCTACCGAACTGTAC+CGG | - | chr6.2:20822953-20822972 | None:intergenic | 40.0% | |
! | ACACCTTTGCTCAAAAGTGT+AGG | - | chr6.2:20820604-20820623 | None:intergenic | 40.0% |
! | CAAGATTCTTTGAAGATGGG+AGG | - | chr6.2:20821199-20821218 | None:intergenic | 40.0% |
! | CATAAATCCAGTTTTCCCTG+AGG | + | chr6.2:20823656-20823675 | MS.gene061967:CDS | 40.0% |
! | CCTTTTCAGCATCCAATTCA+TGG | - | chr6.2:20822290-20822309 | None:intergenic | 40.0% |
! | TAGAGTGTCAGTGATAAGCT+GGG | - | chr6.2:20821616-20821635 | None:intergenic | 40.0% |
! | TGTGGATTTTGCAAAGCTCT+GGG | + | chr6.2:20823286-20823305 | MS.gene061967:intron | 40.0% |
! | TTAGAGTGTCAGTGATAAGC+TGG | - | chr6.2:20821617-20821636 | None:intergenic | 40.0% |
! | TTGTGGATTTTGCAAAGCTC+TGG | + | chr6.2:20823285-20823304 | MS.gene061967:intron | 40.0% |
!! | AAAAGTATCAGGAGGTAGCT+AGG | - | chr6.2:20823138-20823157 | None:intergenic | 40.0% |
!! | CTTTTGAGCAAAGGTGTGTT+TGG | + | chr6.2:20820607-20820626 | MS.gene061967:intron | 40.0% |
!! | GAACTCACTCATTTCTGGTT+AGG | - | chr6.2:20823116-20823135 | None:intergenic | 40.0% |
!! | GTTTGGTGTACGAAATGTGT+TGG | + | chr6.2:20820775-20820794 | MS.gene061967:intron | 40.0% |
!! | TGATGTGGTGTTGTCTGATT+TGG | + | chr6.2:20820297-20820316 | MS.gene061967:CDS | 40.0% |
!!! | TACCTTTTTTGTTCCGACTC+TGG | - | chr6.2:20823714-20823733 | None:intergenic | 40.0% |
AATGAGAGCTCCCTCTTATC+AGG | + | chr6.2:20822921-20822940 | MS.gene061967:intron | 45.0% | |
AATGCGCACCCGAGATATTT+CGG | + | chr6.2:20820116-20820135 | MS.gene061967:CDS | 45.0% | |
AGAATCTTTGCAGCATCCTC+AGG | - | chr6.2:20823675-20823694 | None:intergenic | 45.0% | |
AGCACTTTCCCCTTGATATG+TGG | + | chr6.2:20822836-20822855 | MS.gene061967:intron | 45.0% | |
ATCATCGTAGGCGAGTAGAA+GGG | - | chr6.2:20823203-20823222 | None:intergenic | 45.0% | |
ATCTGGCACCCGAAATATCT+CGG | - | chr6.2:20820128-20820147 | None:intergenic | 45.0% | |
ATTCACACAAGTCCACTGCA+TGG | + | chr6.2:20823540-20823559 | MS.gene061967:CDS | 45.0% | |
ATTGAACACCGGCACAAACA+TGG | - | chr6.2:20820902-20820921 | None:intergenic | 45.0% | |
CAATAAATGTGAGGGAGAGG+GGG | + | chr6.2:20822644-20822663 | MS.gene061967:intron | 45.0% | |
CCAATAAATGTGAGGGAGAG+GGG | + | chr6.2:20822643-20822662 | MS.gene061967:intron | 45.0% | |
CCCATGTCACGCATAGATTA+AGG | + | chr6.2:20822389-20822408 | MS.gene061967:intron | 45.0% | |
CCTCAACTAATTGGTACAGC+GGG | + | chr6.2:20823609-20823628 | MS.gene061967:CDS | 45.0% | |
CGGTATCAACCCACATATCA+AGG | - | chr6.2:20822849-20822868 | None:intergenic | 45.0% | |
CTCCAATAAATGTGAGGGAG+AGG | + | chr6.2:20822641-20822660 | MS.gene061967:intron | 45.0% | |
GAATCTTTGCAGCATCCTCA+GGG | - | chr6.2:20823674-20823693 | None:intergenic | 45.0% | |
GACAACACCACATCATGATC+CGG | - | chr6.2:20820292-20820311 | None:intergenic | 45.0% | |
GAGCTAGAAAGGAGAAAAGG+AGG | - | chr6.2:20822581-20822600 | None:intergenic | 45.0% | |
GCACTTTCCCCTTGATATGT+GGG | + | chr6.2:20822837-20822856 | MS.gene061967:intron | 45.0% | |
GCCTCAACTAATTGGTACAG+CGG | + | chr6.2:20823608-20823627 | MS.gene061967:CDS | 45.0% | |
GCCTTAATCTATGCGTGACA+TGG | - | chr6.2:20822393-20822412 | None:intergenic | 45.0% | |
GCTAGGAACTCACTCATTTC+TGG | - | chr6.2:20823121-20823140 | None:intergenic | 45.0% | |
GGATCCGAAGAAGAATGCTA+TGG | + | chr6.2:20822733-20822752 | MS.gene061967:intron | 45.0% | |
GTCACGCATAGATTAAGGCT+CGG | + | chr6.2:20822394-20822413 | MS.gene061967:intron | 45.0% | |
GTGATAGGATTCGTGAGCTT+GGG | + | chr6.2:20820356-20820375 | MS.gene061967:CDS | 45.0% | |
GTTCGTTGCCCTTTCTGTAT+CGG | + | chr6.2:20820082-20820101 | MS.gene061967:CDS | 45.0% | |
GTTCGTTGCCGATACAGAAA+GGG | - | chr6.2:20820093-20820112 | None:intergenic | 45.0% | |
TCATCATCATCCAATCCCAC+TGG | + | chr6.2:20820058-20820077 | MS.gene061967:CDS | 45.0% | |
TCGTCTTCAAGACGAAGTGT+CGG | - | chr6.2:20820980-20820999 | None:intergenic | 45.0% | |
TCTATGCAAGGGATCATCGT+AGG | - | chr6.2:20823215-20823234 | None:intergenic | 45.0% | |
TGAAACGGGGTCTGTAAGTT+CGG | + | chr6.2:20820225-20820244 | MS.gene061967:CDS | 45.0% | |
TGAAACTCCGGATCATGATG+TGG | + | chr6.2:20820282-20820301 | MS.gene061967:CDS | 45.0% | |
TGAATCTACCGAACTGTACC+GGG | - | chr6.2:20822952-20822971 | None:intergenic | 45.0% | |
TGATAAGAGGGAGCTCTCAT+TGG | - | chr6.2:20822922-20822941 | None:intergenic | 45.0% | |
TGTGATAGGATTCGTGAGCT+TGG | + | chr6.2:20820355-20820374 | MS.gene061967:CDS | 45.0% | |
TGTTCGTTGCCGATACAGAA+AGG | - | chr6.2:20820094-20820113 | None:intergenic | 45.0% | |
TTACAGGCAGTTGATCTTGG+AGG | + | chr6.2:20823453-20823472 | MS.gene061967:intron | 45.0% | |
TTTCTCCAATTCTGCGCTTC+TGG | + | chr6.2:20823395-20823414 | MS.gene061967:intron | 45.0% | |
TTTGGCAACCCTTAGATGCT+AGG | + | chr6.2:20822457-20822476 | MS.gene061967:intron | 45.0% | |
! | ATGAAGTGTCAGTCTGTACC+TGG | + | chr6.2:20822680-20822699 | MS.gene061967:intron | 45.0% |
! | GCACCTACACTTTTGAGCAA+AGG | + | chr6.2:20820598-20820617 | MS.gene061967:intron | 45.0% |
! | GTCGAGTCTGTTGTTTGTGT+CGG | + | chr6.2:20820672-20820691 | MS.gene061967:intron | 45.0% |
! | GTGCCGGTGTTCAATAGATA+TGG | + | chr6.2:20820907-20820926 | MS.gene061967:intron | 45.0% |
! | TACGAAGCTGTGGTGAGTTT+TGG | - | chr6.2:20819958-20819977 | None:intergenic | 45.0% |
! | TAGCATAGCACTGAACCTTC+TGG | + | chr6.2:20823316-20823335 | MS.gene061967:intron | 45.0% |
! | TGAAGTGTCAGTCTGTACCT+GGG | + | chr6.2:20822681-20822700 | MS.gene061967:intron | 45.0% |
! | TGTTTGTGTCGGTGCTTCAT+AGG | + | chr6.2:20820683-20820702 | MS.gene061967:intron | 45.0% |
!! | ATTAGGTGGAATAACGGGCA+GGG | - | chr6.2:20822085-20822104 | None:intergenic | 45.0% |
!! | CTGTAAGTTCGGTGTTGGAT+GGG | + | chr6.2:20820236-20820255 | MS.gene061967:CDS | 45.0% |
!! | GGTGTTGTCTGATTTGGAGA+GGG | + | chr6.2:20820303-20820322 | MS.gene061967:CDS | 45.0% |
!! | TCTGTAAGTTCGGTGTTGGA+TGG | + | chr6.2:20820235-20820254 | MS.gene061967:CDS | 45.0% |
!! | TGGTGTTGTCTGATTTGGAG+AGG | + | chr6.2:20820302-20820321 | MS.gene061967:CDS | 45.0% |
!! | TGTGGGTTGATACCGAGTTA+TGG | + | chr6.2:20822854-20822873 | MS.gene061967:intron | 45.0% |
!! | TTGTCTGATTTGGAGAGGGA+GGG | + | chr6.2:20820307-20820326 | MS.gene061967:CDS | 45.0% |
AAAGGGCAACGAACACCAGT+GGG | - | chr6.2:20820076-20820095 | None:intergenic | 50.0% | |
ACAGACCCCGTTTCATCAAC+CGG | - | chr6.2:20820220-20820239 | None:intergenic | 50.0% | |
ATGCGCACCCGAGATATTTC+GGG | + | chr6.2:20820117-20820136 | MS.gene061967:CDS | 50.0% | |
CCCCTCTCCCTCACATTTAT+TGG | - | chr6.2:20822646-20822665 | None:intergenic | 50.0% | |
CCCGCTGTACCAATTAGTTG+AGG | - | chr6.2:20823612-20823631 | None:intergenic | 50.0% | |
CCTAATGTTTCAGCCCGTCT+TGG | + | chr6.2:20822099-20822118 | MS.gene061967:CDS | 50.0% | |
GATCATCGTAGGCGAGTAGA+AGG | - | chr6.2:20823204-20823223 | None:intergenic | 50.0% | |
GCATGGCGATGAGTCAGAAT+TGG | + | chr6.2:20823557-20823576 | MS.gene061967:CDS | 50.0% | |
TCATCGTAGGCGAGTAGAAG+GGG | - | chr6.2:20823202-20823221 | None:intergenic | 50.0% | |
TCTGGCACCCGAAATATCTC+GGG | - | chr6.2:20820127-20820146 | None:intergenic | 50.0% | |
TGAAGCACAGGCACATACAC+CGG | - | chr6.2:20821343-20821362 | None:intergenic | 50.0% | |
! | AGCCCGTCTTGGAAGTATGA+AGG | + | chr6.2:20822110-20822129 | MS.gene061967:CDS | 50.0% |
! | TCAGACCAGAAGCGCAGAAT+TGG | - | chr6.2:20823403-20823422 | None:intergenic | 50.0% |
!! | AGACGGGCTGAAACATTAGG+TGG | - | chr6.2:20822099-20822118 | None:intergenic | 50.0% |
!! | AGTTCGGTGTTGGATGGGTT+TGG | + | chr6.2:20820241-20820260 | MS.gene061967:CDS | 50.0% |
!! | ATAGCGGTGCTATAGCGTTG+CGG | + | chr6.2:20821769-20821788 | MS.gene061967:intron | 50.0% |
!! | CATTAGGTGGAATAACGGGC+AGG | - | chr6.2:20822086-20822105 | None:intergenic | 50.0% |
!! | CCAAGACGGGCTGAAACATT+AGG | - | chr6.2:20822102-20822121 | None:intergenic | 50.0% |
!! | GAGGGTCGTTTTGATCTTGC+TGG | - | chr6.2:20820016-20820035 | None:intergenic | 50.0% |
!! | GTTCGGTGTTGGATGGGTTT+GGG | + | chr6.2:20820242-20820261 | MS.gene061967:CDS | 50.0% |
!! | GTTGTCTGATTTGGAGAGGG+AGG | + | chr6.2:20820306-20820325 | MS.gene061967:CDS | 50.0% |
!! | TGCAGACCCGGTTGATGAAA+CGG | + | chr6.2:20820210-20820229 | MS.gene061967:CDS | 50.0% |
!! | TGTCTGATTTGGAGAGGGAG+GGG | + | chr6.2:20820308-20820327 | MS.gene061967:CDS | 50.0% |
AAAAACCATGGCGCTGCAGC+TGG | + | chr6.2:20822024-20822043 | MS.gene061967:CDS | 55.0% | |
ACCGGGATGGACCTGATAAG+AGG | - | chr6.2:20822935-20822954 | None:intergenic | 55.0% | |
AGGTCCATCCCGGTACAGTT+CGG | + | chr6.2:20822941-20822960 | MS.gene061967:intron | 55.0% | |
ATCACGCGAACTTGCAGACC+CGG | + | chr6.2:20820198-20820217 | MS.gene061967:CDS | 55.0% | |
CAGACCCCGTTTCATCAACC+GGG | - | chr6.2:20820219-20820238 | None:intergenic | 55.0% | |
CATCGTAGGCGAGTAGAAGG+GGG | - | chr6.2:20823201-20823220 | None:intergenic | 55.0% | |
CCCTCTTATCAGGTCCATCC+CGG | + | chr6.2:20822931-20822950 | MS.gene061967:intron | 55.0% | |
CCGGGATGGACCTGATAAGA+GGG | - | chr6.2:20822934-20822953 | None:intergenic | 55.0% | |
GAAAGGGCAACGAACACCAG+TGG | - | chr6.2:20820077-20820096 | None:intergenic | 55.0% | |
GATTTGGAGAGGGAGGGGAT+TGG | + | chr6.2:20820313-20820332 | MS.gene061967:CDS | 55.0% | |
GCAACGAACACCAGTGGGAT+TGG | - | chr6.2:20820071-20820090 | None:intergenic | 55.0% | |
GCAAGTTCGCGTGATAGAGC+AGG | - | chr6.2:20820193-20820212 | None:intergenic | 55.0% | |
GCAGCATCCTCAGGGAAAAC+TGG | - | chr6.2:20823666-20823685 | None:intergenic | 55.0% | |
GTATCTGTGCCGGACATACG+TGG | + | chr6.2:20821239-20821258 | MS.gene061967:intron | 55.0% | |
TCTACCGAACTGTACCGGGA+TGG | - | chr6.2:20822948-20822967 | None:intergenic | 55.0% | |
TCTGACTCATCGCCATGCAG+TGG | - | chr6.2:20823555-20823574 | None:intergenic | 55.0% | |
! | GTCTGTGCATTGGTGACCGT+TGG | + | chr6.2:20821042-20821061 | MS.gene061967:intron | 55.0% |
!! | CAGACCCGGTTGATGAAACG+GGG | + | chr6.2:20820212-20820231 | MS.gene061967:CDS | 55.0% |
!! | GCAGACCCGGTTGATGAAAC+GGG | + | chr6.2:20820211-20820230 | MS.gene061967:CDS | 55.0% |
!! | GGGGTCTGTAAGTTCGGTGT+TGG | + | chr6.2:20820231-20820250 | MS.gene061967:CDS | 55.0% |
ATGCACCAGCTGCAGCGCCA+TGG | - | chr6.2:20822032-20822051 | None:intergenic | 65.0% | |
GCGGGTTTCGAGCTCGCAAC+TGG | + | chr6.2:20823627-20823646 | MS.gene061967:CDS | 65.0% | |
! | GGAGAGGGAGGGGATTGGTG+AGG | + | chr6.2:20820318-20820337 | MS.gene061967:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 20819920 | 20823734 | 20819920 | ID=MS.gene061967 |
chr6.2 | mRNA | 20819920 | 20823734 | 20819920 | ID=MS.gene061967.t1;Parent=MS.gene061967 |
chr6.2 | exon | 20819920 | 20820405 | 20819920 | ID=MS.gene061967.t1.exon1;Parent=MS.gene061967.t1 |
chr6.2 | CDS | 20819920 | 20820405 | 20819920 | ID=cds.MS.gene061967.t1;Parent=MS.gene061967.t1 |
chr6.2 | exon | 20822018 | 20822308 | 20822018 | ID=MS.gene061967.t1.exon2;Parent=MS.gene061967.t1 |
chr6.2 | CDS | 20822018 | 20822308 | 20822018 | ID=cds.MS.gene061967.t1;Parent=MS.gene061967.t1 |
chr6.2 | exon | 20823459 | 20823734 | 20823459 | ID=MS.gene061967.t1.exon3;Parent=MS.gene061967.t1 |
chr6.2 | CDS | 20823459 | 20823734 | 20823459 | ID=cds.MS.gene061967.t1;Parent=MS.gene061967.t1 |
Gene Sequence |
Protein sequence |