Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06205.t1 | XP_003630601.2 | 92 | 440 | 29 | 3 | 3 | 442 | 2 | 435 | 3.60E-232 | 813.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06205.t1 | B0SC03 | 28.7 | 296 | 164 | 5 | 136 | 431 | 3 | 251 | 1.3e-17 | 92.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06205.t1 | G7LIU9 | 92.0 | 440 | 29 | 3 | 3 | 442 | 2 | 435 | 2.6e-232 | 813.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050226 | MS.gene06205 | 0.807066 | 6.06E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene06205 | 0.81504 | 1.13E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene06205 | 0.802612 | 5.16E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene06205 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene06205 | 0.820554 | 6.45E-53 | -1.69E-46 |
| MS.gene050820 | MS.gene06205 | 0.816896 | 4.37E-52 | -1.69E-46 |
| MS.gene051265 | MS.gene06205 | 0.80982 | 1.57E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene06205 | 0.802733 | 4.88E-49 | -1.69E-46 |
| MS.gene052255 | MS.gene06205 | 0.808486 | 3.03E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene06205 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene056875 | MS.gene06205 | 0.821393 | 4.14E-53 | -1.69E-46 |
| MS.gene057750 | MS.gene06205 | 0.818836 | 1.59E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06205.t1 | MTR_8g101250 | 92.727 | 440 | 26 | 3 | 3 | 442 | 2 | 435 | 0.0 | 820 |
| MS.gene06205.t1 | MTR_8g101250 | 90.504 | 337 | 25 | 4 | 1 | 337 | 1 | 330 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06205.t1 | AT5G35400 | 59.666 | 419 | 138 | 5 | 47 | 439 | 6 | 419 | 2.49e-162 | 464 |
| MS.gene06205.t1 | AT5G35400 | 53.404 | 470 | 137 | 7 | 47 | 439 | 6 | 470 | 6.07e-152 | 440 |
Find 95 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGGAGTTCCAGAAATTT+TGG | 0.144575 | 4.2:-3648021 | MS.gene06205:CDS |
| TCAGTATTATCCAAAATTTC+TGG | 0.163796 | 4.2:+3648011 | None:intergenic |
| TAAAAGTTACTCACAGTTAT+AGG | 0.196185 | 4.2:+3645814 | None:intergenic |
| ATTGCATCTTCAATTTCTTT+TGG | 0.271658 | 4.2:+3646684 | None:intergenic |
| ATATGCATTATTCTTCTATT+AGG | 0.273306 | 4.2:-3648515 | MS.gene06205:CDS |
| ACTCACAGTTATAGGCAATT+TGG | 0.278122 | 4.2:+3645822 | None:intergenic |
| AGCGTTCCATCTAGCGTATT+TGG | 0.282194 | 4.2:+3648347 | None:intergenic |
| TGATGCCTTGTTAAAGCTTA+TGG | 0.285310 | 4.2:-3643297 | MS.gene06205:CDS |
| CCACTTCCCACTGCGATCTT+TGG | 0.311147 | 4.2:+3647968 | None:intergenic |
| CTGTGACATTGCTAGGAAAA+TGG | 0.311452 | 4.2:-3644024 | MS.gene06205:intron |
| GAAGGTTGTGCTGCTGTTGC+TGG | 0.345856 | 4.2:-3647703 | MS.gene06205:CDS |
| CTTTGAACAGTATTCAAGTT+TGG | 0.352375 | 4.2:+3647879 | None:intergenic |
| CCAAAGATCGCAGTGGGAAG+TGG | 0.368735 | 4.2:-3647968 | MS.gene06205:CDS |
| ATCCCTCCAAATACGCTAGA+TGG | 0.395430 | 4.2:-3648353 | MS.gene06205:CDS |
| AGCACCAAAGTGGCGGCAAT+GGG | 0.403358 | 4.2:-3646384 | MS.gene06205:CDS |
| CGGTGAGTGGGAAAATATAA+AGG | 0.408298 | 4.2:+3646419 | None:intergenic |
| AATTCATGTACGCAAGGCCT+TGG | 0.418528 | 4.2:-3648225 | MS.gene06205:CDS |
| TATTAGGAAGCACATGTTGA+TGG | 0.419877 | 4.2:-3648499 | MS.gene06205:CDS |
| GTTGCTGGTCGAACAGATAA+AGG | 0.423976 | 4.2:-3647688 | MS.gene06205:CDS |
| CTCCATTTGGCAGAGAAGTT+CGG | 0.434689 | 4.2:+3646448 | None:intergenic |
| ATCCGAACTTCTCTGCCAAA+TGG | 0.439098 | 4.2:-3646450 | MS.gene06205:CDS |
| TCAACTAGACATAGGCCATC+AGG | 0.443873 | 4.2:+3643236 | None:intergenic |
| ACTCCCCATTGCCGCCACTT+TGG | 0.457889 | 4.2:+3646380 | None:intergenic |
| CAACGCCGTGACCGTGATGA+AGG | 0.459020 | 4.2:+3648438 | None:intergenic |
| AAGCACCAAAGTGGCGGCAA+TGG | 0.461294 | 4.2:-3646385 | MS.gene06205:CDS |
| ATAAAGGTAACGCCTCCATT+TGG | 0.471217 | 4.2:+3646435 | None:intergenic |
| GCAATAAATGACGCAGCACC+AGG | 0.471729 | 4.2:-3646666 | MS.gene06205:CDS |
| TGGTTATGCAGAATTTGAAC+GGG | 0.476034 | 4.2:-3643210 | MS.gene06205:CDS |
| ATCTAGCGTATTTGGAGGGA+TGG | 0.476956 | 4.2:+3648355 | None:intergenic |
| CGTATTTGGAGGGATGGGTA+TGG | 0.479472 | 4.2:+3648361 | None:intergenic |
| AAAATTCTTCTTTCCTATCA+CGG | 0.480718 | 4.2:-3647930 | MS.gene06205:CDS |
| GATGACTATCTCTTTCACTT+TGG | 0.481377 | 4.2:+3648397 | None:intergenic |
| TGTGATTCTGACAGCAAGGA+TGG | 0.483744 | 4.2:-3646328 | MS.gene06205:CDS |
| TTTATCCTTCATCACGGTCA+CGG | 0.488995 | 4.2:-3648443 | MS.gene06205:CDS |
| TTTCCCACTCACCGATGGAC+AGG | 0.493266 | 4.2:-3646410 | MS.gene06205:CDS |
| GGCAGAGAAGTTCGGATGAA+AGG | 0.497782 | 4.2:+3646456 | None:intergenic |
| ATCAAAAGAAGCGCCGTGAT+AGG | 0.502047 | 4.2:+3647917 | None:intergenic |
| GAGGGCTGTATCTGTATATG+AGG | 0.504365 | 4.2:-3646637 | MS.gene06205:intron |
| AATCATATGTGTTCAGCGTA+AGG | 0.506719 | 4.2:-3646288 | MS.gene06205:CDS |
| CAACTAGACATAGGCCATCA+GGG | 0.514616 | 4.2:+3643237 | None:intergenic |
| CGCAGCACCAGGAAAATTGA+GGG | 0.519656 | 4.2:-3646655 | MS.gene06205:CDS |
| TCAGCGTAAGGAAGGTGAAC+CGG | 0.519816 | 4.2:-3646276 | MS.gene06205:CDS |
| GGCCTATGTCTAGTTGATGT+TGG | 0.520883 | 4.2:-3643230 | MS.gene06205:CDS |
| GTTCATTATGCACAGACACT+TGG | 0.523107 | 4.2:-3646722 | MS.gene06205:intron |
| ATCACGGGCAAACATCTTGT+AGG | 0.529576 | 4.2:+3646222 | None:intergenic |
| GGCTGCAGCTTCTCTAATTG+TGG | 0.529621 | 4.2:+3643331 | None:intergenic |
| TGTTCACCATGCTCGAGCTA+TGG | 0.531630 | 4.2:-3645848 | MS.gene06205:CDS |
| AAAAGAACAAACTTGTTGAA+GGG | 0.533238 | 4.2:+3647657 | None:intergenic |
| ATTAGGAAGCACATGTTGAT+GGG | 0.533644 | 4.2:-3648498 | MS.gene06205:CDS |
| TTGGTTATGCAGAATTTGAA+CGG | 0.537032 | 4.2:-3643211 | MS.gene06205:CDS |
| ACGCAGCACCAGGAAAATTG+AGG | 0.539419 | 4.2:-3646656 | MS.gene06205:CDS |
| ATGCACAGACACTTGGAAGA+AGG | 0.552624 | 4.2:-3646715 | MS.gene06205:intron |
| TTGGTGCTTATCCTGTCCAT+CGG | 0.554439 | 4.2:+3646399 | None:intergenic |
| GACAAAGGTTTGCCTATCGA+AGG | 0.558005 | 4.2:-3647721 | MS.gene06205:CDS |
| CAAAGATCGCAGTGGGAAGT+GGG | 0.569166 | 4.2:-3647967 | MS.gene06205:CDS |
| AAACAAAGCTCAACTGCTCA+AGG | 0.573407 | 4.2:-3647743 | MS.gene06205:CDS |
| AAATCATTGACTCGTTGCCA+AGG | 0.574577 | 4.2:+3648208 | None:intergenic |
| CAAGGCATCATCTTCAGCAC+CGG | 0.575344 | 4.2:+3643310 | None:intergenic |
| TGGCTTCCATAGCTCGAGCA+TGG | 0.584068 | 4.2:+3645842 | None:intergenic |
| GTTCCATCTAGCGTATTTGG+AGG | 0.584981 | 4.2:+3648350 | None:intergenic |
| TTTCTCTTTATCCTTCATCA+CGG | 0.588427 | 4.2:-3648449 | MS.gene06205:CDS |
| GTGATTCTGACAGCAAGGAT+GGG | 0.588694 | 4.2:-3646327 | MS.gene06205:CDS |
| GCAGATGGTTAGAGTGCTTG+TGG | 0.588706 | 4.2:-3643357 | MS.gene06205:intron |
| TATCCTGTCCATCGGTGAGT+GGG | 0.593687 | 4.2:+3646407 | None:intergenic |
| ATATGTGTTCAGCGTAAGGA+AGG | 0.595166 | 4.2:-3646284 | MS.gene06205:CDS |
| TTCCATCTAGCGTATTTGGA+GGG | 0.595576 | 4.2:+3648351 | None:intergenic |
| ACAATTAGAGAAGCTGCAGC+CGG | 0.599406 | 4.2:-3643329 | MS.gene06205:CDS |
| ACGGCGTTGTAATTATTCGA+TGG | 0.601058 | 4.2:-3648424 | MS.gene06205:CDS |
| TGAACAAAACACTCTGTTGG+TGG | 0.601474 | 4.2:+3645865 | None:intergenic |
| CGAACTTCTCTGCCAAATGG+AGG | 0.604545 | 4.2:-3646447 | MS.gene06205:CDS |
| GAGGCAAAGAGAAGTTGCCA+CGG | 0.605797 | 4.2:+3648170 | None:intergenic |
| AATACTGAGTTCGAAAGTGA+TGG | 0.606706 | 4.2:-3647996 | MS.gene06205:CDS |
| TTATCCTGTCCATCGGTGAG+TGG | 0.607517 | 4.2:+3646406 | None:intergenic |
| GCTCAACTGCTCAAGGACAA+AGG | 0.612470 | 4.2:-3647736 | MS.gene06205:CDS |
| TCTAGCGTATTTGGAGGGAT+GGG | 0.615798 | 4.2:+3648356 | None:intergenic |
| CAAACTTGAATACTGTTCAA+AGG | 0.617373 | 4.2:-3647878 | MS.gene06205:intron |
| GTGTATCCAAAGATCGCAGT+GGG | 0.622172 | 4.2:-3647974 | MS.gene06205:CDS |
| GCTTCGAATTCATGTACGCA+AGG | 0.624809 | 4.2:-3648231 | MS.gene06205:CDS |
| AACTAGACATAGGCCATCAG+GGG | 0.624908 | 4.2:+3643238 | None:intergenic |
| AATACGCTAGATGGAACGCT+AGG | 0.637091 | 4.2:-3648344 | MS.gene06205:intron |
| ACAGCAGCACAACCTTCGAT+AGG | 0.641899 | 4.2:+3647709 | None:intergenic |
| AGCTTATGGATGCTACGTGT+AGG | 0.642304 | 4.2:-3643283 | MS.gene06205:CDS |
| CAGGATAAGCACCAAAGTGG+CGG | 0.647562 | 4.2:-3646391 | MS.gene06205:CDS |
| AACCAACATCAACTAGACAT+AGG | 0.649817 | 4.2:+3643228 | None:intergenic |
| AGCATTGTAGAAGTGTCACT+TGG | 0.651614 | 4.2:-3647781 | MS.gene06205:CDS |
| AGCATCCATAAGCTTTAACA+AGG | 0.652057 | 4.2:+3643292 | None:intergenic |
| AGGAAAATGGAGAAGAAACG+AGG | 0.662727 | 4.2:-3644011 | MS.gene06205:CDS |
| GGACAGGATAAGCACCAAAG+TGG | 0.670924 | 4.2:-3646394 | MS.gene06205:CDS |
| AATTTGTGATTCTGACAGCA+AGG | 0.676048 | 4.2:-3646332 | MS.gene06205:CDS |
| GTTGTTGTGTCTGAACAAGA+AGG | 0.682813 | 4.2:+3648473 | None:intergenic |
| GCACCAAAGTGGCGGCAATG+GGG | 0.683256 | 4.2:-3646383 | MS.gene06205:CDS |
| TGGTGAACAAAACACTCTGT+TGG | 0.686678 | 4.2:+3645862 | None:intergenic |
| GGTGTATCCAAAGATCGCAG+TGG | 0.708490 | 4.2:-3647975 | MS.gene06205:CDS |
| GGAAAATGGAGAAGAAACGA+GGG | 0.714555 | 4.2:-3644010 | MS.gene06205:CDS |
| ACTAGACATAGGCCATCAGG+GGG | 0.716575 | 4.2:+3643239 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTGTTATGGATAAATA+AGG | - | chr4.2:3644768-3644787 | MS.gene06205:intron | 15.0% |
| !! | AAATTATAGTCATATTCATT+AGG | - | chr4.2:3646319-3646338 | MS.gene06205:CDS | 15.0% |
| !! | AACAATAATAATGTGAATTA+TGG | - | chr4.2:3645205-3645224 | MS.gene06205:intron | 15.0% |
| !! | AACCCATATATATATATATA+TGG | + | chr4.2:3644379-3644398 | None:intergenic | 15.0% |
| !! | ATTTATGAATGACAAATATA+TGG | - | chr4.2:3646673-3646692 | MS.gene06205:CDS | 15.0% |
| !! | GTCCATATATATATATATAT+GGG | - | chr4.2:3644374-3644393 | MS.gene06205:intron | 15.0% |
| !! | TACATTTCTCAAAAAAAAAA+TGG | + | chr4.2:3646593-3646612 | None:intergenic | 15.0% |
| !! | TCTTAATATTAGAAAGATAA+CGG | + | chr4.2:3648077-3648096 | None:intergenic | 15.0% |
| !!! | AAACAAATGAATCATTTTAA+AGG | - | chr4.2:3648111-3648130 | MS.gene06205:intron | 15.0% |
| !!! | ATTCTTTTTCTTTATATTCA+TGG | + | chr4.2:3645144-3645163 | None:intergenic | 15.0% |
| !!! | GAATTTAGAATAACAATATT+GGG | + | chr4.2:3645972-3645991 | None:intergenic | 15.0% |
| !!! | TATATTTTATCCATTTGTAA+TGG | - | chr4.2:3648158-3648177 | MS.gene06205:CDS | 15.0% |
| !!! | TCATTTTATTTTACATTACA+GGG | - | chr4.2:3643440-3643459 | MS.gene06205:intron | 15.0% |
| !!! | TGTATACTGTTTTTTTTTTT+GGG | - | chr4.2:3646778-3646797 | MS.gene06205:intron | 15.0% |
| !!! | TTCATTTTATTTTACATTAC+AGG | - | chr4.2:3643439-3643458 | MS.gene06205:intron | 15.0% |
| !! | AAATTTCTGAATCATACATT+AGG | - | chr4.2:3647040-3647059 | MS.gene06205:intron | 20.0% |
| !! | AAGACATTGATATTAAGAAT+AGG | + | chr4.2:3644079-3644098 | None:intergenic | 20.0% |
| !! | AATTGAAATGTAGTTAGTTA+GGG | + | chr4.2:3643577-3643596 | None:intergenic | 20.0% |
| !! | AGAAAAAGAATCAGAAAAAA+TGG | - | chr4.2:3645153-3645172 | MS.gene06205:intron | 20.0% |
| !! | AGAAAGAGAGAAAAAAATAA+AGG | - | chr4.2:3644801-3644820 | MS.gene06205:intron | 20.0% |
| !! | AGAAGAACAAAAAAAACTAT+GGG | + | chr4.2:3648193-3648212 | None:intergenic | 20.0% |
| !! | AGACATTGATATTAAGAATA+GGG | + | chr4.2:3644078-3644097 | None:intergenic | 20.0% |
| !! | ATAATAATGTGAATTATGGT+AGG | - | chr4.2:3645209-3645228 | MS.gene06205:intron | 20.0% |
| !! | ATATGTTATGTCTAACAATA+TGG | - | chr4.2:3644178-3644197 | MS.gene06205:intron | 20.0% |
| !! | ATATTGTTAGACATAACATA+TGG | + | chr4.2:3644179-3644198 | None:intergenic | 20.0% |
| !! | ATTTCTCAAAAAAAAAATGG+AGG | + | chr4.2:3646590-3646609 | None:intergenic | 20.0% |
| !! | CAATGTGTATGTAAAAAAAA+AGG | + | chr4.2:3646948-3646967 | None:intergenic | 20.0% |
| !! | GAATCAAATCTTAAATTGTA+TGG | - | chr4.2:3645628-3645647 | MS.gene06205:intron | 20.0% |
| !! | GGTCCATATATATATATATA+TGG | - | chr4.2:3644373-3644392 | MS.gene06205:intron | 20.0% |
| !! | TAATTGAAATGTAGTTAGTT+AGG | + | chr4.2:3643578-3643597 | None:intergenic | 20.0% |
| !! | TAGAAAGTGAATAATTAAGA+AGG | + | chr4.2:3643629-3643648 | None:intergenic | 20.0% |
| !! | TTTCTCAAAAAAAAAATGGA+GGG | + | chr4.2:3646589-3646608 | None:intergenic | 20.0% |
| !!! | AACAATTTTACCATCAAATT+AGG | + | chr4.2:3644757-3644776 | None:intergenic | 20.0% |
| !!! | AAGACCTATATTTTTAGAAA+TGG | - | chr4.2:3646512-3646531 | MS.gene06205:intron | 20.0% |
| !!! | ATTTGATGGTAAAATTGTTA+TGG | - | chr4.2:3644758-3644777 | MS.gene06205:intron | 20.0% |
| !!! | CGAATTTAGAATAACAATAT+TGG | + | chr4.2:3645973-3645992 | None:intergenic | 20.0% |
| !!! | GTATACTGTTTTTTTTTTTG+GGG | - | chr4.2:3646779-3646798 | MS.gene06205:intron | 20.0% |
| !!! | GTGTATACTGTTTTTTTTTT+TGG | - | chr4.2:3646777-3646796 | MS.gene06205:intron | 20.0% |
| !!! | TATACTGTTTTTTTTTTTGG+GGG | - | chr4.2:3646780-3646799 | MS.gene06205:intron | 20.0% |
| !!! | TATGTTATTTTTTGTATGAC+AGG | - | chr4.2:3646970-3646989 | MS.gene06205:intron | 20.0% |
| !!! | TATGTTTTTTATTTCCTTAG+AGG | - | chr4.2:3647761-3647780 | MS.gene06205:CDS | 20.0% |
| !!! | TGTGACAGTTTTATATATAA+TGG | - | chr4.2:3645342-3645361 | MS.gene06205:intron | 20.0% |
| !!! | TTTTTTTTTGAGAAATGTAG+AGG | - | chr4.2:3646594-3646613 | MS.gene06205:intron | 20.0% |
| ! | AAAATTCTTCTTTCCTATCA+CGG | - | chr4.2:3643767-3643786 | MS.gene06205:intron | 25.0% |
| ! | AAGATAAGCTAGAAATAAAG+TGG | + | chr4.2:3646245-3646264 | None:intergenic | 25.0% |
| ! | AAGTGAATAATTAAGAAGGA+AGG | + | chr4.2:3643625-3643644 | None:intergenic | 25.0% |
| ! | AATTAAGAAGGAAGGATAAA+GGG | + | chr4.2:3643617-3643636 | None:intergenic | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | + | chr4.2:3644470-3644489 | None:intergenic | 25.0% |
| ! | ATTTGTTTGTGAAGATACAT+TGG | - | chr4.2:3646136-3646155 | MS.gene06205:intron | 25.0% |
| ! | CAAAAAACTCTATAAAACCA+AGG | + | chr4.2:3647618-3647637 | None:intergenic | 25.0% |
| ! | CAGAAGAACAAAAAAAACTA+TGG | + | chr4.2:3648194-3648213 | None:intergenic | 25.0% |
| ! | CATGTCGCATATTATTTAAA+AGG | + | chr4.2:3645092-3645111 | None:intergenic | 25.0% |
| ! | CTACACTGTTTAATTCATAT+TGG | - | chr4.2:3643866-3643885 | MS.gene06205:intron | 25.0% |
| ! | GCAAAGTTATAACTAAAAAG+TGG | - | chr4.2:3644496-3644515 | MS.gene06205:intron | 25.0% |
| ! | GGATATGTTTAGTGATTTAA+TGG | + | chr4.2:3646224-3646243 | None:intergenic | 25.0% |
| ! | GGTATAGTAAAATATTTCAG+AGG | + | chr4.2:3647445-3647464 | None:intergenic | 25.0% |
| ! | GTACATTTAACCTAATTTGA+TGG | - | chr4.2:3644744-3644763 | MS.gene06205:intron | 25.0% |
| ! | GTAGCAATTCATTTATAAGA+AGG | + | chr4.2:3644115-3644134 | None:intergenic | 25.0% |
| ! | TAAAAGTTACTCACAGTTAT+AGG | + | chr4.2:3645886-3645905 | None:intergenic | 25.0% |
| ! | TAATTAAGAAGGAAGGATAA+AGG | + | chr4.2:3643618-3643637 | None:intergenic | 25.0% |
| ! | TACTTGAATTTCTATCTTTG+TGG | - | chr4.2:3645530-3645549 | MS.gene06205:intron | 25.0% |
| ! | TCAGTATTATCCAAAATTTC+TGG | + | chr4.2:3643689-3643708 | None:intergenic | 25.0% |
| ! | TCATGTAACGACAAATATTA+TGG | + | chr4.2:3647348-3647367 | None:intergenic | 25.0% |
| ! | TGATATTAAGAATAGGGAAA+TGG | + | chr4.2:3644072-3644091 | None:intergenic | 25.0% |
| ! | TTACATGATTTATATGTCGT+TGG | - | chr4.2:3647360-3647379 | MS.gene06205:intron | 25.0% |
| ! | TTAGTGATTTAATGGAACTT+GGG | + | chr4.2:3646216-3646235 | None:intergenic | 25.0% |
| ! | TTATGGATAAATAAGGATTG+AGG | - | chr4.2:3644775-3644794 | MS.gene06205:intron | 25.0% |
| ! | TTCTGCTTAAATCATATGAA+AGG | + | chr4.2:3646277-3646296 | None:intergenic | 25.0% |
| ! | TTGTTTATGCGACTATTATT+TGG | - | chr4.2:3645606-3645625 | MS.gene06205:intron | 25.0% |
| ! | TTTAGTGATTTAATGGAACT+TGG | + | chr4.2:3646217-3646236 | None:intergenic | 25.0% |
| ! | TTTATACACTCAAACCATTA+TGG | - | chr4.2:3646561-3646580 | MS.gene06205:intron | 25.0% |
| ! | TTTGTTAGAAATGCTAGAAA+AGG | - | chr4.2:3647010-3647029 | MS.gene06205:intron | 25.0% |
| !! | AATAGCATAATTTGCATGTT+TGG | + | chr4.2:3647289-3647308 | None:intergenic | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | - | chr4.2:3644464-3644483 | MS.gene06205:intron | 25.0% |
| !! | ACCAAGAAATTTTCTATTGT+TGG | - | chr4.2:3647462-3647481 | MS.gene06205:intron | 25.0% |
| !! | ATACTTTCACATCATACTTT+TGG | - | chr4.2:3645565-3645584 | MS.gene06205:intron | 25.0% |
| !! | ATATGGAAGTTTGTTTATGA+TGG | - | chr4.2:3646690-3646709 | MS.gene06205:CDS | 25.0% |
| !! | ATGGTACTTTTGATGAAATA+GGG | + | chr4.2:3644578-3644597 | None:intergenic | 25.0% |
| !! | ATTGCATCTTCAATTTCTTT+TGG | + | chr4.2:3645016-3645035 | None:intergenic | 25.0% |
| !! | ATTTTATCCATTTGTAATGG+AGG | - | chr4.2:3648161-3648180 | MS.gene06205:CDS | 25.0% |
| !! | CCAAGAAATTTTCTATTGTT+GGG | - | chr4.2:3647463-3647482 | MS.gene06205:intron | 25.0% |
| !! | CTGAAAATACATTTTTGTCA+AGG | + | chr4.2:3647415-3647434 | None:intergenic | 25.0% |
| !! | GTCACCATTTCTAAAAATAT+AGG | + | chr4.2:3646519-3646538 | None:intergenic | 25.0% |
| !! | GTGTACAAAAATAAAAGTGT+TGG | + | chr4.2:3647846-3647865 | None:intergenic | 25.0% |
| !! | TACTTTCACATCATACTTTT+GGG | - | chr4.2:3645566-3645585 | MS.gene06205:intron | 25.0% |
| !! | TATGACTATAATTTGAAGCT+TGG | + | chr4.2:3646313-3646332 | None:intergenic | 25.0% |
| !! | TATGGAAGTTTGTTTATGAT+GGG | - | chr4.2:3646691-3646710 | MS.gene06205:CDS | 25.0% |
| !! | TATGGTACTTTTGATGAAAT+AGG | + | chr4.2:3644579-3644598 | None:intergenic | 25.0% |
| !! | TCTCTATTTCTCAAAAGAAT+GGG | - | chr4.2:3646458-3646477 | MS.gene06205:CDS | 25.0% |
| !!! | AAAAAGAACAAACTTGTTGA+AGG | + | chr4.2:3644044-3644063 | None:intergenic | 25.0% |
| !!! | AAAAGAACAAACTTGTTGAA+GGG | + | chr4.2:3644043-3644062 | None:intergenic | 25.0% |
| !!! | ATATTTTTAGAAATGGTGAC+AGG | - | chr4.2:3646519-3646538 | MS.gene06205:intron | 25.0% |
| !!! | TCTCTCTTTTAGAATGATAA+AGG | + | chr4.2:3648004-3648023 | None:intergenic | 25.0% |
| !!! | TTATTTTTGTACACTAACAC+TGG | - | chr4.2:3647852-3647871 | MS.gene06205:intron | 25.0% |
| !!! | TTTTATCCATTTGTAATGGA+GGG | - | chr4.2:3648162-3648181 | MS.gene06205:CDS | 25.0% |
| CAAACTTGAATACTGTTCAA+AGG | - | chr4.2:3643819-3643838 | MS.gene06205:intron | 30.0% | |
| CATAGACCATCTCTAATAAT+TGG | - | chr4.2:3648255-3648274 | MS.gene06205:intron | 30.0% | |
| CCCAACAATAGAAAATTTCT+TGG | + | chr4.2:3647466-3647485 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | + | chr4.2:3644415-3644434 | None:intergenic | 30.0% | |
| GTGCAATGTGAATTATATTG+AGG | + | chr4.2:3646751-3646770 | None:intergenic | 30.0% | |
| TAAATGGTCAAGATGTGTAA+TGG | + | chr4.2:3647207-3647226 | None:intergenic | 30.0% | |
| TCATATACAGACATAGAAGA+GGG | - | chr4.2:3644202-3644221 | MS.gene06205:intron | 30.0% | |
| TGATTTAAGCAGAACATTAC+TGG | - | chr4.2:3646283-3646302 | MS.gene06205:CDS | 30.0% | |
| TTAGACATAACATATGGTTG+TGG | + | chr4.2:3644173-3644192 | None:intergenic | 30.0% | |
| TTGGTTATGCAGAATTTGAA+CGG | - | chr4.2:3648486-3648505 | MS.gene06205:CDS | 30.0% | |
| TTTCCTTCAGCAACAAATAA+TGG | - | chr4.2:3647143-3647162 | MS.gene06205:intron | 30.0% | |
| TTTCTCTTTATCCTTCATCA+CGG | - | chr4.2:3643248-3643267 | MS.gene06205:CDS | 30.0% | |
| ! | AATCAGAAAAAATGGTTTGC+TGG | - | chr4.2:3645161-3645180 | MS.gene06205:intron | 30.0% |
| ! | ACTTTCACATCATACTTTTG+GGG | - | chr4.2:3645567-3645586 | MS.gene06205:intron | 30.0% |
| ! | ATAGTTTCTAGACAGCAAAA+CGG | - | chr4.2:3646840-3646859 | MS.gene06205:intron | 30.0% |
| ! | ATTCCATTATTTGTTGCTGA+AGG | + | chr4.2:3647149-3647168 | None:intergenic | 30.0% |
| ! | CAAATTATGCTATTTGTCCA+TGG | - | chr4.2:3647295-3647314 | MS.gene06205:intron | 30.0% |
| ! | CAGCTAGCATTTAAGATATA+TGG | - | chr4.2:3647101-3647120 | MS.gene06205:intron | 30.0% |
| ! | CTCTCTATTTCTCAAAAGAA+TGG | - | chr4.2:3646457-3646476 | MS.gene06205:CDS | 30.0% |
| ! | CTTTGAACAGTATTCAAGTT+TGG | + | chr4.2:3643821-3643840 | None:intergenic | 30.0% |
| ! | GCTAATCAAATTTTTGCAGA+TGG | - | chr4.2:3648325-3648344 | MS.gene06205:intron | 30.0% |
| ! | TTCTTGAAGCTTTTGTATCA+CGG | + | chr4.2:3645494-3645513 | None:intergenic | 30.0% |
| !! | CATTCTTTTGAGAAATAGAG+AGG | + | chr4.2:3646459-3646478 | None:intergenic | 30.0% |
| !! | TGCTGATACTACTTTTAAGA+GGG | - | chr4.2:3645751-3645770 | MS.gene06205:intron | 30.0% |
| !! | TGTTGCTAACACTCTAAAAT+TGG | + | chr4.2:3647817-3647836 | None:intergenic | 30.0% |
| !! | TTTGTTTATGATGGGTTTCT+TGG | - | chr4.2:3646699-3646718 | MS.gene06205:CDS | 30.0% |
| !!! | GTTCTTTTTTTGCACTTTGT+CGG | - | chr4.2:3644921-3644940 | MS.gene06205:intron | 30.0% |
| !!! | TTTTTTTTTGGGGGTACTTT+GGG | - | chr4.2:3646789-3646808 | MS.gene06205:intron | 30.0% |
| !!! | TTTTTTTTTTGGGGGTACTT+TGG | - | chr4.2:3646788-3646807 | MS.gene06205:intron | 30.0% |
| AAAAACAGATTCTCGTAAGC+AGG | - | chr4.2:3646109-3646128 | MS.gene06205:intron | 35.0% | |
| AAAACAGATTCTCGTAAGCA+GGG | - | chr4.2:3646110-3646129 | MS.gene06205:intron | 35.0% | |
| AAAGTGGAAATCACACCTTA+AGG | - | chr4.2:3644512-3644531 | MS.gene06205:intron | 35.0% | |
| AACCAACATCAACTAGACAT+AGG | + | chr4.2:3648472-3648491 | None:intergenic | 35.0% | |
| AATACTGAGTTCGAAAGTGA+TGG | - | chr4.2:3643701-3643720 | MS.gene06205:intron | 35.0% | |
| AATCATATGTGTTCAGCGTA+AGG | - | chr4.2:3645409-3645428 | MS.gene06205:intron | 35.0% | |
| AATTCCTATTGTCACTCAGA+AGG | + | chr4.2:3647563-3647582 | None:intergenic | 35.0% | |
| AATTTGCATGTTTGGTTGGT+AGG | + | chr4.2:3647281-3647300 | None:intergenic | 35.0% | |
| AATTTGTGATTCTGACAGCA+AGG | - | chr4.2:3645365-3645384 | MS.gene06205:intron | 35.0% | |
| ACATCTTTGTTCACACAGTT+CGG | + | chr4.2:3644646-3644665 | None:intergenic | 35.0% | |
| ACCTGAGATTGAAAAAGAAG+AGG | + | chr4.2:3643549-3643568 | None:intergenic | 35.0% | |
| ACGAAACTATAGCAACTCTA+TGG | - | chr4.2:3644598-3644617 | MS.gene06205:intron | 35.0% | |
| ACTCACAGTTATAGGCAATT+TGG | + | chr4.2:3645878-3645897 | None:intergenic | 35.0% | |
| AGAGTTGCTATAGTTTCGTA+TGG | + | chr4.2:3644597-3644616 | None:intergenic | 35.0% | |
| ATTGCTAAAAGACACCTTCA+TGG | - | chr4.2:3644540-3644559 | MS.gene06205:intron | 35.0% | |
| ATTGGAGAAGCAAAAACCTT+CGG | + | chr4.2:3647799-3647818 | None:intergenic | 35.0% | |
| CAATCCATTTCAATGCAGAT+TGG | + | chr4.2:3647232-3647251 | None:intergenic | 35.0% | |
| CACATGCCAATTATTAGAGA+TGG | + | chr4.2:3648264-3648283 | None:intergenic | 35.0% | |
| CATATACAGACATAGAAGAG+GGG | - | chr4.2:3644203-3644222 | MS.gene06205:intron | 35.0% | |
| CTCATATACAGACATAGAAG+AGG | - | chr4.2:3644201-3644220 | MS.gene06205:intron | 35.0% | |
| GATGACTATCTCTTTCACTT+TGG | + | chr4.2:3643303-3643322 | None:intergenic | 35.0% | |
| GCATAATGAACCCTAGATTA+GGG | + | chr4.2:3644966-3644985 | None:intergenic | 35.0% | |
| GCTTATCATCAGAATAGAGA+GGG | - | chr4.2:3646371-3646390 | MS.gene06205:CDS | 35.0% | |
| GGGCAACAAAAAAGAGATAA+AGG | + | chr4.2:3645952-3645971 | None:intergenic | 35.0% | |
| GTAGACAAAACAGAATCCAT+AGG | + | chr4.2:3646189-3646208 | None:intergenic | 35.0% | |
| GTCCAAGTAAACACTGAATA+GGG | - | chr4.2:3646401-3646420 | MS.gene06205:CDS | 35.0% | |
| TAAAAGTAGTATCAGCACCA+AGG | + | chr4.2:3645748-3645767 | None:intergenic | 35.0% | |
| TAAACGACTAAACTCAGTGA+AGG | + | chr4.2:3645784-3645803 | None:intergenic | 35.0% | |
| TAGAAATGCTAGAAAAGGAC+TGG | - | chr4.2:3647015-3647034 | MS.gene06205:intron | 35.0% | |
| TAGTCCAATCTGCATTGAAA+TGG | - | chr4.2:3647225-3647244 | MS.gene06205:intron | 35.0% | |
| TCAATGCAGATTGGACTAAA+TGG | + | chr4.2:3647223-3647242 | None:intergenic | 35.0% | |
| TCCAAGTAAACACTGAATAG+GGG | - | chr4.2:3646402-3646421 | MS.gene06205:CDS | 35.0% | |
| TCTGTTAATATCGAAGTCCA+TGG | + | chr4.2:3647315-3647334 | None:intergenic | 35.0% | |
| TGCATAATGAACCCTAGATT+AGG | + | chr4.2:3644967-3644986 | None:intergenic | 35.0% | |
| TGCTTATCATCAGAATAGAG+AGG | - | chr4.2:3646370-3646389 | MS.gene06205:CDS | 35.0% | |
| TGGTTATGCAGAATTTGAAC+GGG | - | chr4.2:3648487-3648506 | MS.gene06205:CDS | 35.0% | |
| TGTCCAAGTAAACACTGAAT+AGG | - | chr4.2:3646400-3646419 | MS.gene06205:CDS | 35.0% | |
| TTACTGTCATTCTGTTTCAG+TGG | - | chr4.2:3645808-3645827 | MS.gene06205:intron | 35.0% | |
| TTGCTAAAAGACACCTTCAT+GGG | - | chr4.2:3644541-3644560 | MS.gene06205:intron | 35.0% | |
| ! | AATGATGATGATGATGAGGA+TGG | + | chr4.2:3643658-3643677 | None:intergenic | 35.0% |
| ! | AGCATCCATAAGCTTTAACA+AGG | + | chr4.2:3648408-3648427 | None:intergenic | 35.0% |
| ! | ATGATGATGATGATGAGGAT+GGG | + | chr4.2:3643657-3643676 | None:intergenic | 35.0% |
| ! | ATTAGGAAGCACATGTTGAT+GGG | - | chr4.2:3643199-3643218 | MS.gene06205:CDS | 35.0% |
| ! | CTTCCAATTTTTGCAAAAGC+CGG | + | chr4.2:3645443-3645462 | None:intergenic | 35.0% |
| ! | GCATAATTTGCATGTTTGGT+TGG | + | chr4.2:3647285-3647304 | None:intergenic | 35.0% |
| ! | TAGATCTCACCGTTTTATGT+GGG | + | chr4.2:3647916-3647935 | None:intergenic | 35.0% |
| ! | TATTAGGAAGCACATGTTGA+TGG | - | chr4.2:3643198-3643217 | MS.gene06205:CDS | 35.0% |
| ! | TCTTGAAGCTTTTGTATCAC+GGG | + | chr4.2:3645493-3645512 | None:intergenic | 35.0% |
| ! | TGATGCCTTGTTAAAGCTTA+TGG | - | chr4.2:3648400-3648419 | MS.gene06205:CDS | 35.0% |
| ! | TTTTAGCAATCCACACCTTA+AGG | + | chr4.2:3644530-3644549 | None:intergenic | 35.0% |
| !! | GCTGATACTACTTTTAAGAG+GGG | - | chr4.2:3645752-3645771 | MS.gene06205:intron | 35.0% |
| !! | GTGCTGATACTACTTTTAAG+AGG | - | chr4.2:3645750-3645769 | MS.gene06205:intron | 35.0% |
| !! | TTTATGTTTTGCTGTGCTTG+TGG | - | chr4.2:3646017-3646036 | MS.gene06205:intron | 35.0% |
| !!! | TTCTGGAGTTCCAGAAATTT+TGG | - | chr4.2:3643676-3643695 | MS.gene06205:intron | 35.0% |
| AAAAATGGAGGGCTCCATAA+TGG | + | chr4.2:3646578-3646597 | None:intergenic | 40.0% | |
| AAACAAAGCTCAACTGCTCA+AGG | - | chr4.2:3643954-3643973 | MS.gene06205:intron | 40.0% | |
| AATGAACCCTAGATTAGGGA+CGG | + | chr4.2:3644962-3644981 | None:intergenic | 40.0% | |
| ACGGCGTTGTAATTATTCGA+TGG | - | chr4.2:3643273-3643292 | MS.gene06205:CDS | 40.0% | |
| AGAACAGGTCCCACATAAAA+CGG | - | chr4.2:3647904-3647923 | MS.gene06205:CDS | 40.0% | |
| AGGAAAATGGAGAAGAAACG+AGG | - | chr4.2:3647686-3647705 | MS.gene06205:CDS | 40.0% | |
| AGTAAACACTGAATAGGGGA+AGG | - | chr4.2:3646406-3646425 | MS.gene06205:CDS | 40.0% | |
| ATAAAGGTAACGCCTCCATT+TGG | + | chr4.2:3645265-3645284 | None:intergenic | 40.0% | |
| ATATGTGTTCAGCGTAAGGA+AGG | - | chr4.2:3645413-3645432 | MS.gene06205:intron | 40.0% | |
| ATTTCACCTGTGACATTGCT+AGG | - | chr4.2:3647666-3647685 | MS.gene06205:CDS | 40.0% | |
| CCTCATCATCATCATCATTC+TGG | - | chr4.2:3643659-3643678 | MS.gene06205:intron | 40.0% | |
| CGGTGAGTGGGAAAATATAA+AGG | + | chr4.2:3645281-3645300 | None:intergenic | 40.0% | |
| CTAGACAGCAAAACGGAAAA+AGG | - | chr4.2:3646847-3646866 | MS.gene06205:intron | 40.0% | |
| CTGTGACATTGCTAGGAAAA+TGG | - | chr4.2:3647673-3647692 | MS.gene06205:CDS | 40.0% | |
| GCAAAAACCTTCGGAGAATA+TGG | + | chr4.2:3647790-3647809 | None:intergenic | 40.0% | |
| GCATAACCCTCCATTACAAA+TGG | + | chr4.2:3648171-3648190 | None:intergenic | 40.0% | |
| GGAAAATGGAGAAGAAACGA+GGG | - | chr4.2:3647687-3647706 | MS.gene06205:CDS | 40.0% | |
| GGAGAATATGGTTTCCTCTA+AGG | + | chr4.2:3647778-3647797 | None:intergenic | 40.0% | |
| GTCTGTGCATTCTTCAGAAA+AGG | + | chr4.2:3646627-3646646 | None:intergenic | 40.0% | |
| GTTCATTATGCACAGACACT+TGG | - | chr4.2:3644975-3644994 | MS.gene06205:intron | 40.0% | |
| GTTGTTGTGTCTGAACAAGA+AGG | + | chr4.2:3643227-3643246 | None:intergenic | 40.0% | |
| TACGCCAGAAACTTTAGTGA+TGG | + | chr4.2:3646490-3646509 | None:intergenic | 40.0% | |
| TAGCAATGTCACAGGTGAAA+TGG | + | chr4.2:3647667-3647686 | None:intergenic | 40.0% | |
| TATGACTAACCAACTGACAG+AGG | - | chr4.2:3644886-3644905 | MS.gene06205:intron | 40.0% | |
| TCAGCACCAAGGAAATATGA+AGG | + | chr4.2:3645737-3645756 | None:intergenic | 40.0% | |
| TCCCCTATTCAGTGTTTACT+TGG | + | chr4.2:3646406-3646425 | None:intergenic | 40.0% | |
| TGAACAAAACACTCTGTTGG+TGG | + | chr4.2:3645835-3645854 | None:intergenic | 40.0% | |
| TGACAGGTGTTTCGTATTAC+TGG | - | chr4.2:3646535-3646554 | MS.gene06205:intron | 40.0% | |
| TGCTCCATCACTAAAGTTTC+TGG | - | chr4.2:3646483-3646502 | MS.gene06205:intron | 40.0% | |
| TGGTGAACAAAACACTCTGT+TGG | + | chr4.2:3645838-3645857 | None:intergenic | 40.0% | |
| TTCCATCTAGCGTATTTGGA+GGG | + | chr4.2:3643349-3643368 | None:intergenic | 40.0% | |
| TTGTCCTTCTGAGTGACAAT+AGG | - | chr4.2:3647556-3647575 | MS.gene06205:intron | 40.0% | |
| TTGTGGAATGCAGAGACATA+TGG | + | chr4.2:3644156-3644175 | None:intergenic | 40.0% | |
| TTTATCCTTCATCACGGTCA+CGG | - | chr4.2:3643254-3643273 | MS.gene06205:CDS | 40.0% | |
| ! | CATTTTCCTAGCAATGTCAC+AGG | + | chr4.2:3647675-3647694 | None:intergenic | 40.0% |
| ! | CCAGAATGATGATGATGATG+AGG | + | chr4.2:3643662-3643681 | None:intergenic | 40.0% |
| ! | CGAGAAGACACCTTTTATGA+AGG | - | chr4.2:3644402-3644421 | MS.gene06205:intron | 40.0% |
| ! | CGGCTTTTGCAAAAATTGGA+AGG | - | chr4.2:3645441-3645460 | MS.gene06205:intron | 40.0% |
| ! | GTAGATCTCACCGTTTTATG+TGG | + | chr4.2:3647917-3647936 | None:intergenic | 40.0% |
| ! | TATATTTTCCCACTCACCGA+TGG | - | chr4.2:3645282-3645301 | MS.gene06205:intron | 40.0% |
| ! | TTTTACTTGAACACTGTCCG+TGG | - | chr4.2:3643510-3643529 | MS.gene06205:intron | 40.0% |
| !! | AAATCATTGACTCGTTGCCA+AGG | + | chr4.2:3643492-3643511 | None:intergenic | 40.0% |
| !! | AGCATTGTAGAAGTGTCACT+TGG | - | chr4.2:3643916-3643935 | MS.gene06205:intron | 40.0% |
| !! | GAACCGGCTTTTGCAAAAAT+TGG | - | chr4.2:3645437-3645456 | MS.gene06205:intron | 40.0% |
| !! | TGCTTGTTTTCATCCTAGCA+CGG | - | chr4.2:3647071-3647090 | MS.gene06205:intron | 40.0% |
| !! | TGTTTGGTTGGTAGGCTAAT+TGG | + | chr4.2:3647273-3647292 | None:intergenic | 40.0% |
| !! | TTATGATGGGTTTCTTGGAC+CGG | - | chr4.2:3646704-3646723 | MS.gene06205:CDS | 40.0% |
| !! | TTCACATATTGACTCGACTG+AGG | - | chr4.2:3648303-3648322 | MS.gene06205:intron | 40.0% |
| !! | TTTTTGTTTGACAGCACTCG+AGG | - | chr4.2:3645698-3645717 | MS.gene06205:intron | 40.0% |
| !!! | GCCTCTTCTTTTTCAATCTC+AGG | - | chr4.2:3643545-3643564 | MS.gene06205:intron | 40.0% |
| !!! | TGCTAATCGCTTTTTACGCA+AGG | - | chr4.2:3647729-3647748 | MS.gene06205:CDS | 40.0% |
| AACACTGAATAGGGGAAGGA+AGG | - | chr4.2:3646410-3646429 | MS.gene06205:CDS | 45.0% | |
| AACCTTCCGTCCCTAATCTA+GGG | - | chr4.2:3644953-3644972 | MS.gene06205:intron | 45.0% | |
| AACTAGACATAGGCCATCAG+GGG | + | chr4.2:3648462-3648481 | None:intergenic | 45.0% | |
| AATACGCTAGATGGAACGCT+AGG | - | chr4.2:3643353-3643372 | MS.gene06205:CDS | 45.0% | |
| AATTCATGTACGCAAGGCCT+TGG | - | chr4.2:3643472-3643491 | MS.gene06205:intron | 45.0% | |
| ACAATTAGAGAAGCTGCAGC+CGG | - | chr4.2:3648368-3648387 | MS.gene06205:CDS | 45.0% | |
| ACACTGAATAGGGGAAGGAA+GGG | - | chr4.2:3646411-3646430 | MS.gene06205:CDS | 45.0% | |
| ACAGACATAGAAGAGGGGTA+AGG | - | chr4.2:3644208-3644227 | MS.gene06205:intron | 45.0% | |
| ACAGCACTCGAGGAATAGAT+GGG | - | chr4.2:3645708-3645727 | MS.gene06205:intron | 45.0% | |
| AGACATAGAAGAGGGGTAAG+GGG | - | chr4.2:3644210-3644229 | MS.gene06205:intron | 45.0% | |
| AGCGTTCCATCTAGCGTATT+TGG | + | chr4.2:3643353-3643372 | None:intergenic | 45.0% | |
| AGCTTATGGATGCTACGTGT+AGG | - | chr4.2:3648414-3648433 | MS.gene06205:CDS | 45.0% | |
| ATCACGGGCAAACATCTTGT+AGG | + | chr4.2:3645478-3645497 | None:intergenic | 45.0% | |
| ATCCCTCCAAATACGCTAGA+TGG | - | chr4.2:3643344-3643363 | MS.gene06205:CDS | 45.0% | |
| ATCCGAACTTCTCTGCCAAA+TGG | - | chr4.2:3645247-3645266 | MS.gene06205:intron | 45.0% | |
| ATCTAGCGTATTTGGAGGGA+TGG | + | chr4.2:3643345-3643364 | None:intergenic | 45.0% | |
| ATGCACAGACACTTGGAAGA+AGG | - | chr4.2:3644982-3645001 | MS.gene06205:intron | 45.0% | |
| ATGCTTTAACTCAGACGCCT+TGG | - | chr4.2:3647598-3647617 | MS.gene06205:intron | 45.0% | |
| CAACTAGACATAGGCCATCA+GGG | + | chr4.2:3648463-3648482 | None:intergenic | 45.0% | |
| CAGACATAGAAGAGGGGTAA+GGG | - | chr4.2:3644209-3644228 | MS.gene06205:intron | 45.0% | |
| CCTGATTGTGCAAATGCCAT+GGG | - | chr4.2:3648218-3648237 | MS.gene06205:CDS | 45.0% | |
| CTCCATTTGGCAGAGAAGTT+CGG | + | chr4.2:3645252-3645271 | None:intergenic | 45.0% | |
| CTGTCTATACCTCTGTCAGT+TGG | + | chr4.2:3644898-3644917 | None:intergenic | 45.0% | |
| GAAGGAAGGGCAATTTCTGA+AGG | - | chr4.2:3646424-3646443 | MS.gene06205:CDS | 45.0% | |
| GACAAAGGTTTGCCTATCGA+AGG | - | chr4.2:3643976-3643995 | MS.gene06205:CDS | 45.0% | |
| GAGGAAACCATATTCTCCGA+AGG | - | chr4.2:3647780-3647799 | MS.gene06205:CDS | 45.0% | |
| GAGGGCTGTATCTGTATATG+AGG | - | chr4.2:3645060-3645079 | MS.gene06205:intron | 45.0% | |
| GCACCAAGGAAATATGAAGG+TGG | + | chr4.2:3645734-3645753 | None:intergenic | 45.0% | |
| GCTCTCTACTCTAAGCTTCT+AGG | - | chr4.2:3646078-3646097 | MS.gene06205:intron | 45.0% | |
| GCTTCGAATTCATGTACGCA+AGG | - | chr4.2:3643466-3643485 | MS.gene06205:intron | 45.0% | |
| GGAAATCACACCTTAAGGTG+TGG | - | chr4.2:3644517-3644536 | MS.gene06205:intron | 45.0% | |
| GGACCTGTTCTCAAAATGGT+GGG | + | chr4.2:3647895-3647914 | None:intergenic | 45.0% | |
| GTGATTCTGACAGCAAGGAT+GGG | - | chr4.2:3645370-3645389 | MS.gene06205:intron | 45.0% | |
| GTGTATCCAAAGATCGCAGT+GGG | - | chr4.2:3643723-3643742 | MS.gene06205:intron | 45.0% | |
| GTTCCATCTAGCGTATTTGG+AGG | + | chr4.2:3643350-3643369 | None:intergenic | 45.0% | |
| GTTGCTGGTCGAACAGATAA+AGG | - | chr4.2:3644009-3644028 | MS.gene06205:CDS | 45.0% | |
| TAGCAACTCTATGGTCGTAG+AGG | - | chr4.2:3644607-3644626 | MS.gene06205:intron | 45.0% | |
| TCAACTAGACATAGGCCATC+AGG | + | chr4.2:3648464-3648483 | None:intergenic | 45.0% | |
| TCCTGATTGTGCAAATGCCA+TGG | - | chr4.2:3648217-3648236 | MS.gene06205:CDS | 45.0% | |
| TCTAGCGTATTTGGAGGGAT+GGG | + | chr4.2:3643344-3643363 | None:intergenic | 45.0% | |
| TGTGATTCTGACAGCAAGGA+TGG | - | chr4.2:3645369-3645388 | MS.gene06205:intron | 45.0% | |
| TGTGGGACCTGTTCTCAAAA+TGG | + | chr4.2:3647899-3647918 | None:intergenic | 45.0% | |
| TGTTAGGCCCAATTGTCGTT+GGG | - | chr4.2:3644288-3644307 | MS.gene06205:intron | 45.0% | |
| ! | ACTGACAGAGGTATAGACAG+TGG | - | chr4.2:3644898-3644917 | MS.gene06205:intron | 45.0% |
| ! | CATTGGTTGATCCAGAGACA+TGG | - | chr4.2:3646153-3646172 | MS.gene06205:intron | 45.0% |
| ! | CTGACAGAGGTATAGACAGT+GGG | - | chr4.2:3644899-3644918 | MS.gene06205:intron | 45.0% |
| ! | GATACAGCCCTCAATTTTCC+TGG | + | chr4.2:3645052-3645071 | None:intergenic | 45.0% |
| ! | GGCCTATGTCTAGTTGATGT+TGG | - | chr4.2:3648467-3648486 | MS.gene06205:CDS | 45.0% |
| ! | GGGCAATTTCTGAAGGAGTA+AGG | - | chr4.2:3646431-3646450 | MS.gene06205:CDS | 45.0% |
| ! | GGTTTTGCTAGAACCCATGA+AGG | + | chr4.2:3644557-3644576 | None:intergenic | 45.0% |
| ! | TATCACGGCGCTTCTTTTGA+TGG | - | chr4.2:3643782-3643801 | MS.gene06205:intron | 45.0% |
| ! | TCGTGGGTATTGTCGTAATC+TGG | - | chr4.2:3644352-3644371 | MS.gene06205:intron | 45.0% |
| ! | TTGGTGCTTATCCTGTCCAT+CGG | + | chr4.2:3645301-3645320 | None:intergenic | 45.0% |
| !! | ATCAAAAGAAGCGCCGTGAT+AGG | + | chr4.2:3643783-3643802 | None:intergenic | 45.0% |
| !! | CTTGTTTTCATCCTAGCACG+GGG | - | chr4.2:3647073-3647092 | MS.gene06205:intron | 45.0% |
| !! | GCTTGTTTTCATCCTAGCAC+GGG | - | chr4.2:3647072-3647091 | MS.gene06205:intron | 45.0% |
| !! | TGTCCCACCATTTTGAGAAC+AGG | - | chr4.2:3647889-3647908 | MS.gene06205:CDS | 45.0% |
| !! | TAATAAATAAAAAAATATAC+TGG | + | chr4.2:3647523-3647542 | None:intergenic | 5.0% |
| AACCCTAGATTAGGGACGGA+AGG | + | chr4.2:3644958-3644977 | None:intergenic | 50.0% | |
| ACAGCAGCACAACCTTCGAT+AGG | + | chr4.2:3643991-3644010 | None:intergenic | 50.0% | |
| ACGCAGCACCAGGAAAATTG+AGG | - | chr4.2:3645041-3645060 | MS.gene06205:intron | 50.0% | |
| ACTAGACATAGGCCATCAGG+GGG | + | chr4.2:3648461-3648480 | None:intergenic | 50.0% | |
| AGGCTGCGACTAATGTCAAG+TGG | + | chr4.2:3646928-3646947 | None:intergenic | 50.0% | |
| CAAAGATCGCAGTGGGAAGT+GGG | - | chr4.2:3643730-3643749 | MS.gene06205:intron | 50.0% | |
| CAGAATCCATAGGCCAGTAG+TGG | + | chr4.2:3646179-3646198 | None:intergenic | 50.0% | |
| CAGGATAAGCACCAAAGTGG+CGG | - | chr4.2:3645306-3645325 | MS.gene06205:intron | 50.0% | |
| CCCATGGCATTTGCACAATC+AGG | + | chr4.2:3648221-3648240 | None:intergenic | 50.0% | |
| CGAACTTCTCTGCCAAATGG+AGG | - | chr4.2:3645250-3645269 | MS.gene06205:intron | 50.0% | |
| CGCAGCACCAGGAAAATTGA+GGG | - | chr4.2:3645042-3645061 | MS.gene06205:intron | 50.0% | |
| CGTATTTGGAGGGATGGGTA+TGG | + | chr4.2:3643339-3643358 | None:intergenic | 50.0% | |
| GAACCTTCCGTCCCTAATCT+AGG | - | chr4.2:3644952-3644971 | MS.gene06205:intron | 50.0% | |
| GACAGCACTCGAGGAATAGA+TGG | - | chr4.2:3645707-3645726 | MS.gene06205:intron | 50.0% | |
| GAGGCAAAGAGAAGTTGCCA+CGG | + | chr4.2:3643530-3643549 | None:intergenic | 50.0% | |
| GCAATAAATGACGCAGCACC+AGG | - | chr4.2:3645031-3645050 | MS.gene06205:intron | 50.0% | |
| GCTCAACTGCTCAAGGACAA+AGG | - | chr4.2:3643961-3643980 | MS.gene06205:intron | 50.0% | |
| GGACAGGATAAGCACCAAAG+TGG | - | chr4.2:3645303-3645322 | MS.gene06205:intron | 50.0% | |
| GGCAGAGAAGTTCGGATGAA+AGG | + | chr4.2:3645244-3645263 | None:intergenic | 50.0% | |
| GGCTGCAGCTTCTCTAATTG+TGG | + | chr4.2:3648369-3648388 | None:intergenic | 50.0% | |
| GGGACCTGTTCTCAAAATGG+TGG | + | chr4.2:3647896-3647915 | None:intergenic | 50.0% | |
| GGGCCACCTTCATATTTCCT+TGG | - | chr4.2:3645728-3645747 | MS.gene06205:intron | 50.0% | |
| GGTGTATCCAAAGATCGCAG+TGG | - | chr4.2:3643722-3643741 | MS.gene06205:intron | 50.0% | |
| GTGTTAGGCCCAATTGTCGT+TGG | - | chr4.2:3644287-3644306 | MS.gene06205:intron | 50.0% | |
| GTTAGGCCCAATTGTCGTTG+GGG | - | chr4.2:3644289-3644308 | MS.gene06205:intron | 50.0% | |
| TATCCTGTCCATCGGTGAGT+GGG | + | chr4.2:3645293-3645312 | None:intergenic | 50.0% | |
| TCAGCGTAAGGAAGGTGAAC+CGG | - | chr4.2:3645421-3645440 | MS.gene06205:intron | 50.0% | |
| TGTTCACCATGCTCGAGCTA+TGG | - | chr4.2:3645849-3645868 | MS.gene06205:CDS | 50.0% | |
| TTAGGCCCAATTGTCGTTGG+GGG | - | chr4.2:3644290-3644309 | MS.gene06205:intron | 50.0% | |
| TTATCCTGTCCATCGGTGAG+TGG | + | chr4.2:3645294-3645313 | None:intergenic | 50.0% | |
| ! | CAAGGCATCATCTTCAGCAC+CGG | + | chr4.2:3648390-3648409 | None:intergenic | 50.0% |
| ! | GCAGATGGTTAGAGTGCTTG+TGG | - | chr4.2:3648340-3648359 | MS.gene06205:intron | 50.0% |
| !! | TGGATGTGACTTGCTCCAAC+TGG | - | chr4.2:3646037-3646056 | MS.gene06205:intron | 50.0% |
| AAGCACCAAAGTGGCGGCAA+TGG | - | chr4.2:3645312-3645331 | MS.gene06205:intron | 55.0% | |
| AATTGTCGTTGGGGGAGACG+GGG | - | chr4.2:3644298-3644317 | MS.gene06205:intron | 55.0% | |
| AGCACCAAAGTGGCGGCAAT+GGG | - | chr4.2:3645313-3645332 | MS.gene06205:intron | 55.0% | |
| ATACCCACGAACCATGACCG+CGG | + | chr4.2:3644342-3644361 | None:intergenic | 55.0% | |
| CAATTGTCGTTGGGGGAGAC+GGG | - | chr4.2:3644297-3644316 | MS.gene06205:intron | 55.0% | |
| CATAGAAGAGGGGTAAGGGG+CGG | - | chr4.2:3644213-3644232 | MS.gene06205:intron | 55.0% | |
| CCAAAGATCGCAGTGGGAAG+TGG | - | chr4.2:3643729-3643748 | MS.gene06205:intron | 55.0% | |
| CCAATTGTCGTTGGGGGAGA+CGG | - | chr4.2:3644296-3644315 | MS.gene06205:intron | 55.0% | |
| CCACTTCCCACTGCGATCTT+TGG | + | chr4.2:3643732-3643751 | None:intergenic | 55.0% | |
| CGTCTCCCCCAACGACAATT+GGG | + | chr4.2:3644298-3644317 | None:intergenic | 55.0% | |
| TAGCTGAAGAACCCCGTGCT+AGG | + | chr4.2:3647087-3647106 | None:intergenic | 55.0% | |
| TCCAGAGACATGGCCACTAC+TGG | - | chr4.2:3646163-3646182 | MS.gene06205:intron | 55.0% | |
| TGGCTTCCATAGCTCGAGCA+TGG | + | chr4.2:3645858-3645877 | None:intergenic | 55.0% | |
| TGGGCCTAACACACGCGTTT+GGG | + | chr4.2:3644279-3644298 | None:intergenic | 55.0% | |
| TTGGCCCAAACGCGTGTGTT+AGG | - | chr4.2:3644272-3644291 | MS.gene06205:intron | 55.0% | |
| TTGGGCCTAACACACGCGTT+TGG | + | chr4.2:3644280-3644299 | None:intergenic | 55.0% | |
| TTTCCCACTCACCGATGGAC+AGG | - | chr4.2:3645287-3645306 | MS.gene06205:intron | 55.0% | |
| ! | ACATGGCCACTACTGGCCTA+TGG | - | chr4.2:3646170-3646189 | MS.gene06205:intron | 55.0% |
| ! | GAAGGTTGTGCTGCTGTTGC+TGG | - | chr4.2:3643994-3644013 | MS.gene06205:CDS | 55.0% |
| !! | ACGGCGCTTCTTTTGATGGC+TGG | - | chr4.2:3643786-3643805 | MS.gene06205:intron | 55.0% |
| !! | TGATGGGTTTCTTGGACCGG+TGG | - | chr4.2:3646707-3646726 | MS.gene06205:CDS | 55.0% |
| AATGCCATGGGCGTGCAGTC+TGG | - | chr4.2:3648230-3648249 | MS.gene06205:CDS | 60.0% | |
| ACGCGTTTGGGCCAAACCCA+AGG | + | chr4.2:3644267-3644286 | None:intergenic | 60.0% | |
| ACTCCCCATTGCCGCCACTT+TGG | + | chr4.2:3645320-3645339 | None:intergenic | 60.0% | |
| AGCGTGCACACTCTGCCAGT+TGG | + | chr4.2:3646055-3646074 | None:intergenic | 60.0% | |
| ATTGTCGTTGGGGGAGACGG+GGG | - | chr4.2:3644299-3644318 | MS.gene06205:intron | 60.0% | |
| CAACGCCGTGACCGTGATGA+AGG | + | chr4.2:3643262-3643281 | None:intergenic | 60.0% | |
| CCGTCTCCCCCAACGACAAT+TGG | + | chr4.2:3644299-3644318 | None:intergenic | 60.0% | |
| CGCGTTTGGGCCAAACCCAA+GGG | + | chr4.2:3644266-3644285 | None:intergenic | 60.0% | |
| GATGACCCAGCTCAAGCCAC+CGG | + | chr4.2:3646726-3646745 | None:intergenic | 60.0% | |
| GCACCAAAGTGGCGGCAATG+GGG | - | chr4.2:3645314-3645333 | MS.gene06205:intron | 60.0% | |
| GCCAGTAGTGGCCATGTCTC+TGG | + | chr4.2:3646167-3646186 | None:intergenic | 60.0% | |
| TGTACCAGACTGCACGCCCA+TGG | + | chr4.2:3648237-3648256 | None:intergenic | 60.0% | |
| TTGGACCGGTGGCTTGAGCT+GGG | - | chr4.2:3646718-3646737 | MS.gene06205:intron | 60.0% | |
| TTGGGCCAAACCCAAGGGCA+GGG | + | chr4.2:3644261-3644280 | None:intergenic | 60.0% | |
| TTTGGGCCAAACCCAAGGGC+AGG | + | chr4.2:3644262-3644281 | None:intergenic | 60.0% | |
| ! | GAACCATGACCGCGGTGCTA+TGG | + | chr4.2:3644334-3644353 | None:intergenic | 60.0% |
| AAACCCAAGGGCAGGGGTGG+AGG | + | chr4.2:3644254-3644273 | None:intergenic | 65.0% | |
| AACCCAAGGGCAGGGGTGGA+GGG | + | chr4.2:3644253-3644272 | None:intergenic | 65.0% | |
| AGCACCGCGGTCATGGTTCG+TGG | - | chr4.2:3644335-3644354 | MS.gene06205:intron | 65.0% | |
| CTTGGACCGGTGGCTTGAGC+TGG | - | chr4.2:3646717-3646736 | MS.gene06205:intron | 65.0% | |
| GCACCGCGGTCATGGTTCGT+GGG | - | chr4.2:3644336-3644355 | MS.gene06205:intron | 65.0% | |
| GGACCATAGCACCGCGGTCA+TGG | - | chr4.2:3644328-3644347 | MS.gene06205:intron | 65.0% | |
| TCCACCCCTGCCCTTGGGTT+TGG | - | chr4.2:3644253-3644272 | MS.gene06205:intron | 65.0% | |
| TGGGCCAAACCCAAGGGCAG+GGG | + | chr4.2:3644260-3644279 | None:intergenic | 65.0% | |
| ! | CATAGGCCATCAGGGGGTGC+TGG | + | chr4.2:3648455-3648474 | None:intergenic | 65.0% |
| CTCCCTCCACCCCTGCCCTT+GGG | - | chr4.2:3644248-3644267 | MS.gene06205:intron | 70.0% | |
| GCCAAACCCAAGGGCAGGGG+TGG | + | chr4.2:3644257-3644276 | None:intergenic | 70.0% | |
| GCTCCTCCAGCACCCCCTGA+TGG | - | chr4.2:3648446-3648465 | MS.gene06205:CDS | 70.0% | |
| TGCGGGGGACCATAGCACCG+CGG | - | chr4.2:3644322-3644341 | MS.gene06205:intron | 70.0% | |
| !! | AGGCCATCAGGGGGTGCTGG+AGG | + | chr4.2:3648452-3648471 | None:intergenic | 70.0% |
| !! | AGGGGGTGCTGGAGGAGCAG+TGG | + | chr4.2:3648444-3648463 | None:intergenic | 70.0% |
| CGTTGGGGGAGACGGGGGTG+CGG | - | chr4.2:3644304-3644323 | MS.gene06205:intron | 75.0% | |
| GCTCCCTCCACCCCTGCCCT+TGG | - | chr4.2:3644247-3644266 | MS.gene06205:intron | 75.0% | |
| ! | GTTGGGGGAGACGGGGGTGC+GGG | - | chr4.2:3644305-3644324 | MS.gene06205:intron | 75.0% |
| ! | TTGGGGGAGACGGGGGTGCG+GGG | - | chr4.2:3644306-3644325 | MS.gene06205:intron | 75.0% |
| !! | TGGGGGAGACGGGGGTGCGG+GGG | - | chr4.2:3644307-3644326 | MS.gene06205:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 3643184 | 3648535 | 3643184 | ID=MS.gene06205 |
| chr4.2 | mRNA | 3643184 | 3648535 | 3643184 | ID=MS.gene06205.t1;Parent=MS.gene06205 |
| chr4.2 | exon | 3648345 | 3648535 | 3648345 | ID=MS.gene06205.t1.exon1;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3648345 | 3648535 | 3648345 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3648153 | 3648258 | 3648153 | ID=MS.gene06205.t1.exon2;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3648153 | 3648258 | 3648153 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3647879 | 3648066 | 3647879 | ID=MS.gene06205.t1.exon3;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3647879 | 3648066 | 3647879 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3647656 | 3647801 | 3647656 | ID=MS.gene06205.t1.exon4;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3647656 | 3647801 | 3647656 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3646638 | 3646729 | 3646638 | ID=MS.gene06205.t1.exon5;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3646638 | 3646729 | 3646638 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3646202 | 3646488 | 3646202 | ID=MS.gene06205.t1.exon6;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3646202 | 3646488 | 3646202 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3645828 | 3645891 | 3645828 | ID=MS.gene06205.t1.exon7;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3645828 | 3645891 | 3645828 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3643969 | 3644031 | 3643969 | ID=MS.gene06205.t1.exon8;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3643969 | 3644031 | 3643969 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| chr4.2 | exon | 3643184 | 3643375 | 3643184 | ID=MS.gene06205.t1.exon9;Parent=MS.gene06205.t1 |
| chr4.2 | CDS | 3643184 | 3643375 | 3643184 | ID=cds.MS.gene06205.t1;Parent=MS.gene06205.t1 |
| Gene Sequence |
| Protein sequence |
