Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063197.t1 | XP_004497988.1 | 92.4 | 302 | 20 | 2 | 1 | 302 | 114 | 412 | 4.50E-69 | 271.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063197.t1 | Q8W4K5 | 57.0 | 309 | 120 | 6 | 2 | 302 | 119 | 422 | 2.5e-44 | 180.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063197.t1 | A0A1S2Y1R8 | 92.4 | 302 | 20 | 2 | 1 | 302 | 114 | 412 | 3.3e-69 | 271.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050478 | MS.gene063197 | 0.806405 | 8.36E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene063197 | 0.827361 | 1.63E-54 | -1.69E-46 |
| MS.gene053331 | MS.gene063197 | 0.842209 | 2.97E-58 | -1.69E-46 |
| MS.gene053332 | MS.gene063197 | 0.929989 | 3.14E-93 | -1.69E-46 |
| MS.gene054473 | MS.gene063197 | 0.849485 | 3.14E-60 | -1.69E-46 |
| MS.gene055356 | MS.gene063197 | 0.842054 | 3.27E-58 | -1.69E-46 |
| MS.gene055358 | MS.gene063197 | 0.849352 | 3.42E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063197.t1 | MTR_1g041395 | 93.377 | 302 | 18 | 1 | 1 | 302 | 100 | 399 | 3.55e-133 | 386 |
| MS.gene063197.t1 | MTR_1g041395 | 93.377 | 302 | 18 | 1 | 1 | 302 | 106 | 405 | 8.45e-133 | 385 |
| MS.gene063197.t1 | MTR_1g041395 | 93.355 | 301 | 18 | 1 | 2 | 302 | 100 | 398 | 4.03e-132 | 384 |
| MS.gene063197.t1 | MTR_1g041395 | 92.593 | 270 | 18 | 1 | 33 | 302 | 1 | 268 | 4.22e-107 | 315 |
| MS.gene063197.t1 | MTR_1g102980 | 76.689 | 296 | 49 | 5 | 3 | 297 | 104 | 380 | 1.27e-98 | 298 |
| MS.gene063197.t1 | MTR_1g071450 | 69.872 | 312 | 76 | 8 | 1 | 302 | 111 | 414 | 7.14e-93 | 284 |
| MS.gene063197.t1 | MTR_7g095500 | 67.419 | 310 | 86 | 6 | 1 | 302 | 102 | 404 | 1.21e-92 | 286 |
| MS.gene063197.t1 | MTR_1g102980 | 82.018 | 228 | 33 | 2 | 71 | 297 | 35 | 255 | 2.46e-80 | 246 |
| MS.gene063197.t1 | MTR_4g039910 | 49.573 | 234 | 90 | 4 | 70 | 302 | 99 | 305 | 2.80e-42 | 149 |
| MS.gene063197.t1 | MTR_3g110182 | 50.215 | 233 | 88 | 4 | 70 | 301 | 139 | 344 | 9.11e-42 | 148 |
| MS.gene063197.t1 | MTR_3g110182 | 50.215 | 233 | 88 | 4 | 70 | 301 | 141 | 346 | 3.17e-41 | 147 |
| MS.gene063197.t1 | MTR_5g012870 | 37.500 | 240 | 110 | 4 | 72 | 302 | 113 | 321 | 1.00e-31 | 122 |
| MS.gene063197.t1 | MTR_4g129510 | 37.946 | 224 | 103 | 3 | 72 | 293 | 118 | 307 | 1.81e-12 | 67.4 |
| MS.gene063197.t1 | MTR_4g129510 | 38.739 | 222 | 104 | 3 | 72 | 293 | 87 | 276 | 3.77e-12 | 66.6 |
| MS.gene063197.t1 | MTR_4g129510 | 39.048 | 210 | 92 | 3 | 72 | 279 | 118 | 293 | 1.17e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063197.t1 | AT4G14740 | 74.675 | 308 | 66 | 5 | 1 | 302 | 105 | 406 | 8.63e-133 | 383 |
| MS.gene063197.t1 | AT4G14740 | 74.675 | 308 | 66 | 5 | 1 | 302 | 105 | 406 | 3.26e-131 | 381 |
| MS.gene063197.t1 | AT4G14740 | 74.675 | 308 | 66 | 5 | 1 | 302 | 105 | 406 | 3.26e-131 | 381 |
| MS.gene063197.t1 | AT3G22810 | 73.871 | 310 | 61 | 5 | 1 | 302 | 104 | 401 | 7.72e-129 | 373 |
| MS.gene063197.t1 | AT3G22810 | 73.871 | 310 | 61 | 5 | 1 | 302 | 104 | 401 | 2.33e-127 | 371 |
| MS.gene063197.t1 | AT5G43870 | 69.767 | 301 | 61 | 5 | 4 | 302 | 112 | 384 | 1.87e-108 | 320 |
| MS.gene063197.t1 | AT4G14740 | 74.427 | 262 | 60 | 3 | 46 | 302 | 8 | 267 | 7.45e-107 | 314 |
| MS.gene063197.t1 | AT5G43870 | 69.767 | 301 | 61 | 5 | 4 | 302 | 112 | 384 | 1.47e-106 | 318 |
| MS.gene063197.t1 | AT3G22810 | 75.194 | 258 | 54 | 3 | 52 | 302 | 9 | 263 | 1.86e-102 | 303 |
| MS.gene063197.t1 | AT3G63300 | 67.742 | 310 | 85 | 7 | 2 | 302 | 119 | 422 | 1.24e-87 | 271 |
| MS.gene063197.t1 | AT3G63300 | 72.428 | 243 | 60 | 3 | 61 | 302 | 28 | 264 | 2.79e-71 | 224 |
| MS.gene063197.t1 | AT4G16670 | 39.749 | 239 | 116 | 4 | 72 | 302 | 132 | 350 | 6.25e-32 | 122 |
| MS.gene063197.t1 | AT4G16670 | 39.749 | 239 | 116 | 4 | 72 | 302 | 132 | 350 | 1.92e-31 | 122 |
| MS.gene063197.t1 | AT4G17350 | 39.419 | 241 | 107 | 6 | 72 | 302 | 115 | 326 | 1.32e-29 | 116 |
| MS.gene063197.t1 | AT4G16670 | 35.448 | 268 | 116 | 5 | 72 | 302 | 132 | 379 | 6.02e-26 | 106 |
| MS.gene063197.t1 | AT5G47440 | 37.668 | 223 | 112 | 2 | 80 | 302 | 131 | 326 | 2.10e-25 | 105 |
| MS.gene063197.t1 | AT4G32780 | 46.781 | 233 | 97 | 3 | 70 | 302 | 149 | 354 | 3.02e-21 | 93.6 |
| MS.gene063197.t1 | AT4G32780 | 46.781 | 233 | 97 | 3 | 70 | 302 | 130 | 335 | 3.46e-21 | 93.2 |
| MS.gene063197.t1 | AT5G57770 | 36.177 | 293 | 137 | 8 | 24 | 296 | 63 | 325 | 1.41e-20 | 90.9 |
| MS.gene063197.t1 | AT5G57770 | 36.177 | 293 | 137 | 8 | 24 | 296 | 63 | 325 | 8.27e-20 | 89.4 |
Find 97 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATATTCCAAACTTCTTTA+AGG | 0.144092 | 1.4:+25886993 | None:intergenic |
| CATGCTGCAGTTTCGGTTGC+TGG | 0.221538 | 1.4:-25887557 | MS.gene063197:CDS |
| TGCACCTGAAGAAAATTTCT+TGG | 0.293086 | 1.4:-25886864 | MS.gene063197:CDS |
| AATATTCCAAACTTCTTTAA+GGG | 0.302087 | 1.4:+25886994 | None:intergenic |
| AATTCCTGTGGAGAAGAATT+TGG | 0.302301 | 1.4:-25886963 | MS.gene063197:CDS |
| GGAGAGGAAGGAAAAGAAAA+AGG | 0.308251 | 1.4:-25887609 | MS.gene063197:CDS |
| GATAGTCTTCCTGATGTTCT+TGG | 0.310186 | 1.4:+25889044 | None:intergenic |
| GCCGCAACTGCTGCTTCGTC+AGG | 0.322180 | 1.4:-25887506 | MS.gene063197:CDS |
| CAAGGGCCCTTAAAGAAGTT+TGG | 0.334393 | 1.4:-25887000 | MS.gene063197:CDS |
| GCCACCGGCGGTGGCGGAGG+CGG | 0.357360 | 1.4:-25887659 | MS.gene063197:CDS |
| TCAGCTCCATGCTGCAGTTT+CGG | 0.359795 | 1.4:-25887564 | MS.gene063197:CDS |
| GAGGGAAGACGGTGGGGAGG+TGG | 0.359935 | 1.4:-25887637 | MS.gene063197:CDS |
| GCCGTGAATGTGAGGTCTGC+CGG | 0.362149 | 1.4:-25887347 | MS.gene063197:CDS |
| ACCAGTTTCACCTTCTGAAA+TGG | 0.365421 | 1.4:-25888979 | MS.gene063197:CDS |
| TGTTGAGGCTGCTGAGGCTA+TGG | 0.367362 | 1.4:-25887408 | MS.gene063197:CDS |
| ACCGGCGGTGGCGGAGGCGG+AGG | 0.377516 | 1.4:-25887656 | MS.gene063197:CDS |
| GTCTCTGCCACCGGCGGTGG+CGG | 0.378739 | 1.4:-25887665 | MS.gene063197:CDS |
| TTCTGAAATGGATGATTTCA+AGG | 0.395872 | 1.4:-25888967 | MS.gene063197:intron |
| AGCATGGAGCTGAGCATTGT+GGG | 0.402854 | 1.4:+25887574 | None:intergenic |
| TCCATTTCAGAAGGTGAAAC+TGG | 0.405672 | 1.4:+25888978 | None:intergenic |
| TTCGCCACTGAAGCTACTAT+TGG | 0.406875 | 1.4:+25886889 | None:intergenic |
| GGTAGCGTCGGCTGCCACAT+TGG | 0.419914 | 1.4:-25887444 | MS.gene063197:CDS |
| GCACCTGAAGAAAATTTCTT+GGG | 0.433850 | 1.4:-25886863 | MS.gene063197:CDS |
| ATGGTAATGGTAATGGTGGT+GGG | 0.434293 | 1.4:-25886934 | MS.gene063197:CDS |
| GTTGAGGCTGCTGAGGCTAT+GGG | 0.435850 | 1.4:-25887407 | MS.gene063197:CDS |
| AATGGTAATGGTAATGGTGG+TGG | 0.445582 | 1.4:-25886935 | MS.gene063197:CDS |
| TGCTTTCAGGTGAACTCCAT+TGG | 0.445858 | 1.4:-25886202 | MS.gene063197:intron |
| TCTGCCACCGGCGGTGGCGG+AGG | 0.450077 | 1.4:-25887662 | MS.gene063197:CDS |
| GCGGAGGGAAGACGGTGGGG+AGG | 0.464521 | 1.4:-25887640 | MS.gene063197:CDS |
| CCCTCCGCCTCCGCCACCGC+CGG | 0.464687 | 1.4:+25887655 | None:intergenic |
| GAGGTGGCTGAAGGAGAGGA+AGG | 0.465983 | 1.4:-25887621 | MS.gene063197:CDS |
| CCGTGAATGTGAGGTCTGCC+GGG | 0.466362 | 1.4:-25887346 | MS.gene063197:CDS |
| TTTAAGAAGCTCACAACCTC+TGG | 0.469999 | 1.4:+25886817 | None:intergenic |
| GAGAAGAATTTGGTAGGTAA+TGG | 0.471793 | 1.4:-25886953 | MS.gene063197:CDS |
| CCGGCGGTGGCGGAGGCGGA+GGG | 0.476107 | 1.4:-25887655 | MS.gene063197:CDS |
| GAGGTATCTCCAAGAACATC+AGG | 0.477235 | 1.4:-25889053 | MS.gene063197:CDS |
| TGGCGGAGGCGGAGGGAAGA+CGG | 0.479655 | 1.4:-25887648 | MS.gene063197:CDS |
| TTGACGGCTGCTGCTGCGAC+AGG | 0.482568 | 1.4:-25887311 | MS.gene063197:intron |
| ATGAAGAGTAGACATGTTGC+TGG | 0.483425 | 1.4:-25885880 | MS.gene063197:CDS |
| GTAGGTAATGGTAATGGTAA+TGG | 0.484250 | 1.4:-25886941 | MS.gene063197:CDS |
| TGAGCGTGATCACCTTGCTT+CGG | 0.492692 | 1.4:-25887381 | MS.gene063197:CDS |
| GAGGCGGAGGGAAGACGGTG+GGG | 0.498373 | 1.4:-25887643 | MS.gene063197:CDS |
| AGAGTCTCTGCCACCGGCGG+TGG | 0.498489 | 1.4:-25887668 | MS.gene063197:CDS |
| TTGAATTCGTAGCATTGCGT+GGG | 0.502451 | 1.4:-25887039 | MS.gene063197:intron |
| CCCGGCAGACCTCACATTCA+CGG | 0.504849 | 1.4:+25887346 | None:intergenic |
| TCCGCCTCCGCCACCGCCGG+TGG | 0.505322 | 1.4:+25887658 | None:intergenic |
| TTTGAATTCGTAGCATTGCG+TGG | 0.505388 | 1.4:-25887040 | MS.gene063197:intron |
| GCGTGGGGCTGCAACATTGA+AGG | 0.507167 | 1.4:-25887023 | MS.gene063197:CDS |
| CGGAGGCGGAGGGAAGACGG+TGG | 0.509388 | 1.4:-25887645 | MS.gene063197:CDS |
| TTGAGGCTGCTGAGGCTATG+GGG | 0.510751 | 1.4:-25887406 | MS.gene063197:CDS |
| TGGGGAGGTGGCTGAAGGAG+AGG | 0.513502 | 1.4:-25887625 | MS.gene063197:CDS |
| GACAGACATGGCGGTAGCGT+CGG | 0.513746 | 1.4:-25887456 | MS.gene063197:CDS |
| CACAGCAGTGGACCTCTGAA+TGG | 0.517311 | 1.4:-25889020 | MS.gene063197:CDS |
| GACGGTGGGGAGGTGGCTGA+AGG | 0.519611 | 1.4:-25887630 | MS.gene063197:CDS |
| GGAGGCGGAGGGAAGACGGT+GGG | 0.523154 | 1.4:-25887644 | MS.gene063197:CDS |
| GTCGGCTGCCACATTGGTGG+CGG | 0.524542 | 1.4:-25887438 | MS.gene063197:CDS |
| CCTACCAAATTCTTCTCCAC+AGG | 0.525363 | 1.4:+25886959 | None:intergenic |
| CTTCTTAAACGCACTCGCAC+AGG | 0.525523 | 1.4:-25886803 | MS.gene063197:intron |
| TGTTGTGATTGTTGCTTGAA+CGG | 0.529425 | 1.4:+25887726 | None:intergenic |
| GGGCTGCAACATTGAAGGCA+AGG | 0.533544 | 1.4:-25887018 | MS.gene063197:CDS |
| CGGGGATATTACAACGTTGA+CGG | 0.533765 | 1.4:-25887327 | MS.gene063197:CDS |
| TGAGGCTGCTGAGGCTATGG+GGG | 0.541052 | 1.4:-25887405 | MS.gene063197:CDS |
| AGCGTCGGCTGCCACATTGG+TGG | 0.546806 | 1.4:-25887441 | MS.gene063197:CDS |
| CAGCATGGAGCTGAGCATTG+TGG | 0.557047 | 1.4:+25887573 | None:intergenic |
| GGCTGCAATAGCCGCAACAG+CGG | 0.560843 | 1.4:+25887526 | None:intergenic |
| TTGAAATCATCCATTTCAGA+AGG | 0.569576 | 1.4:+25888969 | None:intergenic |
| ACCTGACGAAGCAGCAGTTG+CGG | 0.576149 | 1.4:+25887505 | None:intergenic |
| GGTAATGGTAATGGTGGTGG+GGG | 0.586229 | 1.4:-25886932 | MS.gene063197:CDS |
| GGCTGCAACATTGAAGGCAA+GGG | 0.588562 | 1.4:-25887017 | MS.gene063197:CDS |
| TGCTCGTAAAGACGAGCAGA+TGG | 0.589082 | 1.4:-25887483 | MS.gene063197:CDS |
| CCTGTGGAGAAGAATTTGGT+AGG | 0.590190 | 1.4:-25886959 | MS.gene063197:CDS |
| AATTTGGTAGGTAATGGTAA+TGG | 0.595486 | 1.4:-25886947 | MS.gene063197:CDS |
| CGTCAACGTTGTAATATCCC+CGG | 0.596809 | 1.4:+25887328 | None:intergenic |
| TTAGCTCTGCCGTGAATGTG+AGG | 0.602071 | 1.4:-25887355 | MS.gene063197:CDS |
| CGGTGGCAGAGACTCTGTAA+TGG | 0.602908 | 1.4:+25887675 | None:intergenic |
| TACAGAGTCTCTGCCACCGG+CGG | 0.605030 | 1.4:-25887671 | MS.gene063197:CDS |
| CATTACAGAGTCTCTGCCAC+CGG | 0.605075 | 1.4:-25887674 | MS.gene063197:CDS |
| TGGAGTTGCAGCCGCTGTTG+CGG | 0.611144 | 1.4:-25887537 | MS.gene063197:CDS |
| TGGTAATGGTAATGGTGGTG+GGG | 0.612875 | 1.4:-25886933 | MS.gene063197:CDS |
| CAGAGCTAACGACCGAAGCA+AGG | 0.613746 | 1.4:+25887369 | None:intergenic |
| GGTAATGGTAATGGTAATGG+TGG | 0.614443 | 1.4:-25886938 | MS.gene063197:CDS |
| AGCTCCAATAGTAGCTTCAG+TGG | 0.618065 | 1.4:-25886893 | MS.gene063197:CDS |
| TCAATGTGTTGAGGCTGCTG+AGG | 0.620073 | 1.4:-25887414 | MS.gene063197:CDS |
| AGTAGAGAATTGCTTGCCAG+AGG | 0.621265 | 1.4:-25886833 | MS.gene063197:CDS |
| CAGCAACCGAAACTGCAGCA+TGG | 0.627948 | 1.4:+25887558 | None:intergenic |
| TGAAGAGTAGACATGTTGCT+GGG | 0.634135 | 1.4:-25885879 | MS.gene063197:CDS |
| ATTTCAGAAGGTGAAACTGG+TGG | 0.639220 | 1.4:+25888981 | None:intergenic |
| TATTGCTGCTGTAATTCCTG+TGG | 0.643534 | 1.4:-25886975 | MS.gene063197:CDS |
| TTATATAAACAGAATGAACC+AGG | 0.647298 | 1.4:-25886165 | MS.gene063197:intron |
| TCTGTTAAAGATCCATTCAG+AGG | 0.654153 | 1.4:+25889008 | None:intergenic |
| GCAGATGGCGAAGACAGACA+TGG | 0.655202 | 1.4:-25887468 | MS.gene063197:CDS |
| TGAATTCGTAGCATTGCGTG+GGG | 0.663115 | 1.4:-25887038 | MS.gene063197:intron |
| GGAAGACTATCACACAGCAG+TGG | 0.682507 | 1.4:-25889032 | MS.gene063197:CDS |
| CGTGAATGTGAGGTCTGCCG+GGG | 0.682902 | 1.4:-25887345 | MS.gene063197:CDS |
| GGTGGCGGCTCAATGTGTTG+AGG | 0.700934 | 1.4:-25887423 | MS.gene063197:CDS |
| ACATTGAGCCGCCACCAATG+TGG | 0.704591 | 1.4:+25887430 | None:intergenic |
| GATGGCGAAGACAGACATGG+CGG | 0.768845 | 1.4:-25887465 | MS.gene063197:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACATACATAATTTATTAA+TGG | - | chr1.4:25887133-25887152 | MS.gene063197:intron | 10.0% |
| !! | TTTAGTAAAATTATAATCAA+TGG | + | chr1.4:25886337-25886356 | None:intergenic | 10.0% |
| !! | ATAATTGAAATGAAAAGAAA+AGG | + | chr1.4:25888795-25888814 | None:intergenic | 15.0% |
| !! | ATTAAAACTCTTATAATTGA+TGG | + | chr1.4:25888858-25888877 | None:intergenic | 15.0% |
| !! | CATGAAATTAATCATAAAAA+AGG | - | chr1.4:25887668-25887687 | MS.gene063197:CDS | 15.0% |
| !! | TCAATATATATAACAATATG+TGG | + | chr1.4:25886467-25886486 | None:intergenic | 15.0% |
| !!! | TATAGTTGTTGATTAATTTA+TGG | - | chr1.4:25887841-25887860 | MS.gene063197:intron | 15.0% |
| !!! | TTAAATTTTTGTTTTTCAGT+TGG | - | chr1.4:25888562-25888581 | MS.gene063197:intron | 15.0% |
| !!! | TTGAAATTTTTCACTTTTAA+AGG | + | chr1.4:25886680-25886699 | None:intergenic | 15.0% |
| !!! | TTTAAAATTCAAGTTATGTT+TGG | + | chr1.4:25886245-25886264 | None:intergenic | 15.0% |
| !! | AATATTCCAAACTTCTTTAA+GGG | + | chr1.4:25887922-25887941 | None:intergenic | 20.0% |
| !! | AATTCTCAAATATATATACC+TGG | + | chr1.4:25888769-25888788 | None:intergenic | 20.0% |
| !! | ACTATAATTACACATAAAAG+AGG | + | chr1.4:25886710-25886729 | None:intergenic | 20.0% |
| !! | AGAAAGGAAAAAAAAAACAA+TGG | - | chr1.4:25887804-25887823 | MS.gene063197:intron | 20.0% |
| !! | CACTTTAATTAAAGCTAATT+TGG | + | chr1.4:25886398-25886417 | None:intergenic | 20.0% |
| !! | CTATAATTACACATAAAAGA+GGG | + | chr1.4:25886709-25886728 | None:intergenic | 20.0% |
| !! | TACATCTTTCTTAATTTCAT+AGG | - | chr1.4:25885973-25885992 | MS.gene063197:intron | 20.0% |
| !! | TGTAAACAATCACAAATAAA+AGG | + | chr1.4:25887650-25887669 | None:intergenic | 20.0% |
| !!! | AAAAGCATAGAGTATATAAT+GGG | + | chr1.4:25888596-25888615 | None:intergenic | 20.0% |
| !!! | ATTGTTTCTTAAGTTATTAC+CGG | - | chr1.4:25888471-25888490 | MS.gene063197:intron | 20.0% |
| !!! | GCATTTTTTGTGATATATAT+TGG | + | chr1.4:25887062-25887081 | None:intergenic | 20.0% |
| !!! | GCTGTTTTATTTTTTGTAAA+GGG | + | chr1.4:25886735-25886754 | None:intergenic | 20.0% |
| !!! | GTGTTTCTTTTTATGTTTAA+AGG | - | chr1.4:25888663-25888682 | MS.gene063197:intron | 20.0% |
| !!! | TCTAATTTGAAACTAGAATT+CGG | + | chr1.4:25888263-25888282 | None:intergenic | 20.0% |
| !!! | TGCTGTTTTATTTTTTGTAA+AGG | + | chr1.4:25886736-25886755 | None:intergenic | 20.0% |
| !!! | TGTTTTTCTCAAAACTTTTT+GGG | - | chr1.4:25886055-25886074 | MS.gene063197:intron | 20.0% |
| !!! | TTGTTTTTCTCAAAACTTTT+TGG | - | chr1.4:25886054-25886073 | MS.gene063197:intron | 20.0% |
| !!! | TTTTTGTGATATATATTGGT+GGG | + | chr1.4:25887058-25887077 | None:intergenic | 20.0% |
| !!! | TTTTTTGTGATATATATTGG+TGG | + | chr1.4:25887059-25887078 | None:intergenic | 20.0% |
| ! | AAAAACCATGTTTATCCATA+AGG | + | chr1.4:25886929-25886948 | None:intergenic | 25.0% |
| ! | AAAACCATGTTTATCCATAA+GGG | + | chr1.4:25886928-25886947 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAAAAACAATGG+TGG | - | chr1.4:25887807-25887826 | MS.gene063197:intron | 25.0% |
| ! | ACTACAATTTGTAGATTTCT+AGG | + | chr1.4:25888973-25888992 | None:intergenic | 25.0% |
| ! | AGCAATAACAAACTTTGTAT+TGG | + | chr1.4:25886963-25886982 | None:intergenic | 25.0% |
| ! | AGGCTAAAATTCAATTATAG+AGG | - | chr1.4:25888229-25888248 | MS.gene063197:intron | 25.0% |
| ! | AGTGCTAAAAACAAAAACTT+TGG | + | chr1.4:25886312-25886331 | None:intergenic | 25.0% |
| ! | ATCTTTCTTAATTTCATAGG+TGG | - | chr1.4:25885976-25885995 | MS.gene063197:intron | 25.0% |
| ! | ATGACAACATTGATAAATGT+TGG | + | chr1.4:25888427-25888446 | None:intergenic | 25.0% |
| ! | CAATATTCCAAACTTCTTTA+AGG | + | chr1.4:25887923-25887942 | None:intergenic | 25.0% |
| ! | CATAGACTTAAGTCTATAAT+TGG | + | chr1.4:25888367-25888386 | None:intergenic | 25.0% |
| ! | CTTAACCATTTGATTCTTAA+AGG | + | chr1.4:25886613-25886632 | None:intergenic | 25.0% |
| ! | GGTAATAACTTAAGAAACAA+TGG | + | chr1.4:25888472-25888491 | None:intergenic | 25.0% |
| ! | TGATTAATTTATGGTGTTTG+TGG | - | chr1.4:25887850-25887869 | MS.gene063197:intron | 25.0% |
| ! | TGTTACCAACAAACATAAAT+TGG | - | chr1.4:25886154-25886173 | MS.gene063197:intron | 25.0% |
| ! | TTATATAAACAGAATGAACC+AGG | - | chr1.4:25888748-25888767 | MS.gene063197:intron | 25.0% |
| !! | AGTTACCTTTAAGAATCAAA+TGG | - | chr1.4:25886605-25886624 | MS.gene063197:intron | 25.0% |
| !! | ATAATTGATGGCCAAATAAT+TGG | + | chr1.4:25888846-25888865 | None:intergenic | 25.0% |
| !! | CAAAAGCATAGAGTATATAA+TGG | + | chr1.4:25888597-25888616 | None:intergenic | 25.0% |
| !! | CTTCAAATTTAAAGTGTGTT+TGG | - | chr1.4:25888398-25888417 | MS.gene063197:intron | 25.0% |
| !! | CTTCTCAGTATATGTTTTAT+TGG | - | chr1.4:25888530-25888549 | MS.gene063197:intron | 25.0% |
| !! | TCATTGTTTCTTATGAAACA+TGG | + | chr1.4:25886548-25886567 | None:intergenic | 25.0% |
| !! | TGACTGACTTAAATAAAGAA+AGG | - | chr1.4:25887788-25887807 | MS.gene063197:intron | 25.0% |
| !! | TTGATTTGATAATTGCTTTC+AGG | - | chr1.4:25888698-25888717 | MS.gene063197:intron | 25.0% |
| !! | TTGTATGTGGATTAAAGAAA+AGG | - | chr1.4:25888614-25888633 | MS.gene063197:intron | 25.0% |
| !!! | AAAGTTGATTTTGACATCTT+TGG | + | chr1.4:25888325-25888344 | None:intergenic | 25.0% |
| AAAAACCAAACAAACCAACA+TGG | + | chr1.4:25886035-25886054 | None:intergenic | 30.0% | |
| AAAAGAAAAAGGAGGAAACA+AGG | - | chr1.4:25887315-25887334 | MS.gene063197:CDS | 30.0% | |
| AAACCATGTTTATCCATAAG+GGG | + | chr1.4:25886927-25886946 | None:intergenic | 30.0% | |
| AAAGAAAAAGGAGGAAACAA+GGG | - | chr1.4:25887316-25887335 | MS.gene063197:CDS | 30.0% | |
| AAAGTGAACTGAATGTAAAG+TGG | - | chr1.4:25888178-25888197 | MS.gene063197:intron | 30.0% | |
| AGTCACAGCTTCATTAAAAT+TGG | - | chr1.4:25886789-25886808 | MS.gene063197:intron | 30.0% | |
| ATCAACTTTGCTTCTTTCAA+TGG | - | chr1.4:25888336-25888355 | MS.gene063197:intron | 30.0% | |
| ATGGCTAAATAAGGAATCAA+AGG | + | chr1.4:25886838-25886857 | None:intergenic | 30.0% | |
| CTTGACTATGACCAATTATT+TGG | - | chr1.4:25888832-25888851 | MS.gene063197:intron | 30.0% | |
| GAATGTAAAGTGGTTTAAAG+TGG | - | chr1.4:25888188-25888207 | MS.gene063197:intron | 30.0% | |
| GATGAATAAGAATCTGATAG+TGG | - | chr1.4:25888878-25888897 | MS.gene063197:intron | 30.0% | |
| GCAATTGCATTTATTGCTAA+TGG | - | chr1.4:25886900-25886919 | MS.gene063197:CDS | 30.0% | |
| GTCATCCAATTTATGTTTGT+TGG | + | chr1.4:25886162-25886181 | None:intergenic | 30.0% | |
| TGGCTAAATAAGGAATCAAA+GGG | + | chr1.4:25886837-25886856 | None:intergenic | 30.0% | |
| TTGAAATCATCCATTTCAGA+AGG | + | chr1.4:25885947-25885966 | None:intergenic | 30.0% | |
| TTGTTAGCTGTTACAACTAT+AGG | + | chr1.4:25887004-25887023 | None:intergenic | 30.0% | |
| ! | AAACTGACACAATTTTCCAA+TGG | + | chr1.4:25888730-25888749 | None:intergenic | 30.0% |
| ! | AAGGAATCAAAGGGTAATTT+TGG | + | chr1.4:25886828-25886847 | None:intergenic | 30.0% |
| ! | AATTTGGTAGGTAATGGTAA+TGG | - | chr1.4:25887966-25887985 | MS.gene063197:intron | 30.0% |
| ! | ATACTCTATGCTTTTGTATG+TGG | - | chr1.4:25888601-25888620 | MS.gene063197:intron | 30.0% |
| ! | ATTAGCATTTTCAGTCTCAT+TGG | - | chr1.4:25887735-25887754 | MS.gene063197:intron | 30.0% |
| ! | TAAAGTGGTTTAAAGTGGTT+TGG | - | chr1.4:25888193-25888212 | MS.gene063197:intron | 30.0% |
| ! | TACTGATTATTACTGTCTCT+GGG | + | chr1.4:25886186-25886205 | None:intergenic | 30.0% |
| ! | TTACTGATTATTACTGTCTC+TGG | + | chr1.4:25886187-25886206 | None:intergenic | 30.0% |
| !! | AATCAAAGGGTAATTTTGGT+TGG | + | chr1.4:25886824-25886843 | None:intergenic | 30.0% |
| !! | TTAGATCCTCTTTTTGTTTC+AGG | - | chr1.4:25888999-25889018 | MS.gene063197:CDS | 30.0% |
| !! | TTCTGAAATGGATGATTTCA+AGG | - | chr1.4:25885946-25885965 | MS.gene063197:intron | 30.0% |
| !!! | AGCTTTTTTTGTTTCCTTGA+TGG | + | chr1.4:25886857-25886876 | None:intergenic | 30.0% |
| AACTTTGCTTCTTTCAATGG+TGG | - | chr1.4:25888339-25888358 | MS.gene063197:intron | 35.0% | |
| AATTCCTGTGGAGAAGAATT+TGG | - | chr1.4:25887950-25887969 | MS.gene063197:intron | 35.0% | |
| ACCTTAACAAACAACCATGT+TGG | - | chr1.4:25886018-25886037 | MS.gene063197:intron | 35.0% | |
| GAAAGAAGTGACTAAAGTGA+GGG | - | chr1.4:25888900-25888919 | MS.gene063197:intron | 35.0% | |
| GAGAAGAATTTGGTAGGTAA+TGG | - | chr1.4:25887960-25887979 | MS.gene063197:intron | 35.0% | |
| GCACCTGAAGAAAATTTCTT+GGG | - | chr1.4:25888050-25888069 | MS.gene063197:intron | 35.0% | |
| GCATAACCTGAAACAAAAAG+AGG | + | chr1.4:25889008-25889027 | None:intergenic | 35.0% | |
| GTAACAGAGAAAGCTGAAAT+TGG | + | chr1.4:25886140-25886159 | None:intergenic | 35.0% | |
| TCTGTTAAAGATCCATTCAG+AGG | + | chr1.4:25885908-25885927 | None:intergenic | 35.0% | |
| TGCACCTGAAGAAAATTTCT+TGG | - | chr1.4:25888049-25888068 | MS.gene063197:intron | 35.0% | |
| TTTCAGTCTCATTGGAATGT+TGG | - | chr1.4:25887743-25887762 | MS.gene063197:intron | 35.0% | |
| ! | ACCAACATGGTTGTTTGTTA+AGG | + | chr1.4:25886022-25886041 | None:intergenic | 35.0% |
| ! | AGAACGATGTGATGATGTTA+AGG | - | chr1.4:25888928-25888947 | MS.gene063197:intron | 35.0% |
| ! | ATGCCCAAGAAATTTTCTTC+AGG | + | chr1.4:25888056-25888075 | None:intergenic | 35.0% |
| ! | ATTGCTTTGTTCAGAATCTC+AGG | - | chr1.4:25886977-25886996 | MS.gene063197:CDS | 35.0% |
| ! | GAACGATGTGATGATGTTAA+GGG | - | chr1.4:25888929-25888948 | MS.gene063197:intron | 35.0% |
| ! | GATTCCTTATTTAGCCATCA+AGG | - | chr1.4:25886840-25886859 | MS.gene063197:CDS | 35.0% |
| ! | GTTTCCTTGATGGCTAAATA+AGG | + | chr1.4:25886847-25886866 | None:intergenic | 35.0% |
| ! | TGTTGTGATTGTTGCTTGAA+CGG | + | chr1.4:25887190-25887209 | None:intergenic | 35.0% |
| !! | AACAACCATGTTGGTTTGTT+TGG | - | chr1.4:25886027-25886046 | MS.gene063197:intron | 35.0% |
| !! | GTAGGTAATGGTAATGGTAA+TGG | - | chr1.4:25887972-25887991 | MS.gene063197:intron | 35.0% |
| ATGAAGAGTAGACATGTTGC+TGG | - | chr1.4:25889033-25889052 | MS.gene063197:CDS | 40.0% | |
| ATTTCAGAAGGTGAAACTGG+TGG | + | chr1.4:25885935-25885954 | None:intergenic | 40.0% | |
| GAGGAAGGAAAAGAAAAAGG+AGG | - | chr1.4:25887307-25887326 | MS.gene063197:intron | 40.0% | |
| GATAGTCTTCCTGATGTTCT+TGG | + | chr1.4:25885872-25885891 | None:intergenic | 40.0% | |
| GCTGAAATTGGTACTACTAG+TGG | + | chr1.4:25886128-25886147 | None:intergenic | 40.0% | |
| GGAAAGAAGTGACTAAAGTG+AGG | - | chr1.4:25888899-25888918 | MS.gene063197:intron | 40.0% | |
| GGAGAGGAAGGAAAAGAAAA+AGG | - | chr1.4:25887304-25887323 | MS.gene063197:intron | 40.0% | |
| TAACAGTACACTGTACAGTG+AGG | + | chr1.4:25886101-25886120 | None:intergenic | 40.0% | |
| TATTGCTGCTGTAATTCCTG+TGG | - | chr1.4:25887938-25887957 | MS.gene063197:intron | 40.0% | |
| TCCATTTCAGAAGGTGAAAC+TGG | + | chr1.4:25885938-25885957 | None:intergenic | 40.0% | |
| TGAAGAGTAGACATGTTGCT+GGG | - | chr1.4:25889034-25889053 | MS.gene063197:CDS | 40.0% | |
| TGGCTGTTTGCATTGAAGAA+AGG | + | chr1.4:25886225-25886244 | None:intergenic | 40.0% | |
| TTACGTCTGAGTGTCATGTT+CGG | - | chr1.4:25888497-25888516 | MS.gene063197:intron | 40.0% | |
| TTGAATTCGTAGCATTGCGT+GGG | - | chr1.4:25887874-25887893 | MS.gene063197:intron | 40.0% | |
| TTTAAGAAGCTCACAACCTC+TGG | + | chr1.4:25888099-25888118 | None:intergenic | 40.0% | |
| TTTGAATTCGTAGCATTGCG+TGG | - | chr1.4:25887873-25887892 | MS.gene063197:intron | 40.0% | |
| ! | ACCAGTTTCACCTTCTGAAA+TGG | - | chr1.4:25885934-25885953 | MS.gene063197:intron | 40.0% |
| ! | TATTGCTAATGGACCCCTTA+TGG | - | chr1.4:25886911-25886930 | MS.gene063197:CDS | 40.0% |
| !! | AATGGTAATGGTAATGGTGG+TGG | - | chr1.4:25887978-25887997 | MS.gene063197:intron | 40.0% |
| !! | ATGGTAATGGTAATGGTGGT+GGG | - | chr1.4:25887979-25887998 | MS.gene063197:intron | 40.0% |
| !! | GGTAATGGTAATGGTAATGG+TGG | - | chr1.4:25887975-25887994 | MS.gene063197:intron | 40.0% |
| AGCTCCAATAGTAGCTTCAG+TGG | - | chr1.4:25888020-25888039 | MS.gene063197:intron | 45.0% | |
| AGTAGAGAATTGCTTGCCAG+AGG | - | chr1.4:25888080-25888099 | MS.gene063197:intron | 45.0% | |
| CAAGGGCCCTTAAAGAAGTT+TGG | - | chr1.4:25887913-25887932 | MS.gene063197:intron | 45.0% | |
| CCTACCAAATTCTTCTCCAC+AGG | + | chr1.4:25887957-25887976 | None:intergenic | 45.0% | |
| CCTGTGGAGAAGAATTTGGT+AGG | - | chr1.4:25887954-25887973 | MS.gene063197:intron | 45.0% | |
| CGGGGATATTACAACGTTGA+CGG | - | chr1.4:25887586-25887605 | MS.gene063197:CDS | 45.0% | |
| CGTCAACGTTGTAATATCCC+CGG | + | chr1.4:25887588-25887607 | None:intergenic | 45.0% | |
| GGACCCCTTATGGATAAACA+TGG | - | chr1.4:25886921-25886940 | MS.gene063197:CDS | 45.0% | |
| GGTTTGGATCGCTAAACACA+AGG | - | chr1.4:25888209-25888228 | MS.gene063197:intron | 45.0% | |
| TGAATTCGTAGCATTGCGTG+GGG | - | chr1.4:25887875-25887894 | MS.gene063197:intron | 45.0% | |
| TGACACTCAGACGTAAACAC+CGG | + | chr1.4:25888493-25888512 | None:intergenic | 45.0% | |
| TTCGCCACTGAAGCTACTAT+TGG | + | chr1.4:25888027-25888046 | None:intergenic | 45.0% | |
| ! | GAGGTATCTCCAAGAACATC+AGG | - | chr1.4:25885860-25885879 | MS.gene063197:CDS | 45.0% |
| ! | TGCTTTCAGGTGAACTCCAT+TGG | - | chr1.4:25888711-25888730 | MS.gene063197:intron | 45.0% |
| !! | ACATTGACTCGTGTGAGACA+TGG | + | chr1.4:25886435-25886454 | None:intergenic | 45.0% |
| !! | TGGTAATGGTAATGGTGGTG+GGG | - | chr1.4:25887980-25887999 | MS.gene063197:intron | 45.0% |
| ACGTCGACGTTTCAGTGTTC+AGG | - | chr1.4:25886515-25886534 | MS.gene063197:intron | 50.0% | |
| CATTACAGAGTCTCTGCCAC+CGG | - | chr1.4:25887239-25887258 | MS.gene063197:intron | 50.0% | |
| CTTCTTAAACGCACTCGCAC+AGG | - | chr1.4:25888110-25888129 | MS.gene063197:intron | 50.0% | |
| GGAAGACTATCACACAGCAG+TGG | - | chr1.4:25885881-25885900 | MS.gene063197:CDS | 50.0% | |
| GGCTGCAACATTGAAGGCAA+GGG | - | chr1.4:25887896-25887915 | MS.gene063197:intron | 50.0% | |
| TCAATGTGTTGAGGCTGCTG+AGG | - | chr1.4:25887499-25887518 | MS.gene063197:CDS | 50.0% | |
| TCAGCTCCATGCTGCAGTTT+CGG | - | chr1.4:25887349-25887368 | MS.gene063197:CDS | 50.0% | |
| TGAGCGTGATCACCTTGCTT+CGG | - | chr1.4:25887532-25887551 | MS.gene063197:CDS | 50.0% | |
| TGCTCGTAAAGACGAGCAGA+TGG | - | chr1.4:25887430-25887449 | MS.gene063197:CDS | 50.0% | |
| ! | AGCATGGAGCTGAGCATTGT+GGG | + | chr1.4:25887342-25887361 | None:intergenic | 50.0% |
| !! | GGTAATGGTAATGGTGGTGG+GGG | - | chr1.4:25887981-25888000 | MS.gene063197:intron | 50.0% |
| !! | TTAGCTCTGCCGTGAATGTG+AGG | - | chr1.4:25887558-25887577 | MS.gene063197:CDS | 50.0% |
| ACATTGAGCCGCCACCAATG+TGG | + | chr1.4:25887486-25887505 | None:intergenic | 55.0% | |
| ACCTGACGAAGCAGCAGTTG+CGG | + | chr1.4:25887411-25887430 | None:intergenic | 55.0% | |
| CACAGCAGTGGACCTCTGAA+TGG | - | chr1.4:25885893-25885912 | MS.gene063197:CDS | 55.0% | |
| CAGAGCTAACGACCGAAGCA+AGG | + | chr1.4:25887547-25887566 | None:intergenic | 55.0% | |
| CAGCAACCGAAACTGCAGCA+TGG | + | chr1.4:25887358-25887377 | None:intergenic | 55.0% | |
| CATGCTGCAGTTTCGGTTGC+TGG | - | chr1.4:25887356-25887375 | MS.gene063197:CDS | 55.0% | |
| CGGTGGCAGAGACTCTGTAA+TGG | + | chr1.4:25887241-25887260 | None:intergenic | 55.0% | |
| GATGGCGAAGACAGACATGG+CGG | - | chr1.4:25887448-25887467 | MS.gene063197:CDS | 55.0% | |
| GCAGATGGCGAAGACAGACA+TGG | - | chr1.4:25887445-25887464 | MS.gene063197:CDS | 55.0% | |
| GGGCTGCAACATTGAAGGCA+AGG | - | chr1.4:25887895-25887914 | MS.gene063197:intron | 55.0% | |
| GTTGAGGCTGCTGAGGCTAT+GGG | - | chr1.4:25887506-25887525 | MS.gene063197:CDS | 55.0% | |
| TGTTGAGGCTGCTGAGGCTA+TGG | - | chr1.4:25887505-25887524 | MS.gene063197:CDS | 55.0% | |
| TTGAGGCTGCTGAGGCTATG+GGG | - | chr1.4:25887507-25887526 | MS.gene063197:CDS | 55.0% | |
| ! | CAGCATGGAGCTGAGCATTG+TGG | + | chr1.4:25887343-25887362 | None:intergenic | 55.0% |
| CCCGGCAGACCTCACATTCA+CGG | + | chr1.4:25887570-25887589 | None:intergenic | 60.0% | |
| CCGTGAATGTGAGGTCTGCC+GGG | - | chr1.4:25887567-25887586 | MS.gene063197:CDS | 60.0% | |
| CGTGAATGTGAGGTCTGCCG+GGG | - | chr1.4:25887568-25887587 | MS.gene063197:CDS | 60.0% | |
| CTGCTGCTGCGACAGGTATG+CGG | - | chr1.4:25887609-25887628 | MS.gene063197:CDS | 60.0% | |
| GACAGACATGGCGGTAGCGT+CGG | - | chr1.4:25887457-25887476 | MS.gene063197:CDS | 60.0% | |
| GAGGTGGCTGAAGGAGAGGA+AGG | - | chr1.4:25887292-25887311 | MS.gene063197:intron | 60.0% | |
| GCCGTGAATGTGAGGTCTGC+CGG | - | chr1.4:25887566-25887585 | MS.gene063197:CDS | 60.0% | |
| GCGTGGGGCTGCAACATTGA+AGG | - | chr1.4:25887890-25887909 | MS.gene063197:intron | 60.0% | |
| GGCTGCAATAGCCGCAACAG+CGG | + | chr1.4:25887390-25887409 | None:intergenic | 60.0% | |
| GGTGGGGGCAGTGGTAGTAA+TGG | - | chr1.4:25887996-25888015 | MS.gene063197:intron | 60.0% | |
| TACAGAGTCTCTGCCACCGG+CGG | - | chr1.4:25887242-25887261 | MS.gene063197:intron | 60.0% | |
| TGAGGCTGCTGAGGCTATGG+GGG | - | chr1.4:25887508-25887527 | MS.gene063197:CDS | 60.0% | |
| TGGAGTTGCAGCCGCTGTTG+CGG | - | chr1.4:25887376-25887395 | MS.gene063197:CDS | 60.0% | |
| ! | GGTGGCGGCTCAATGTGTTG+AGG | - | chr1.4:25887490-25887509 | MS.gene063197:CDS | 60.0% |
| GTCGGCTGCCACATTGGTGG+CGG | - | chr1.4:25887475-25887494 | MS.gene063197:CDS | 65.0% | |
| TGGGGAGGTGGCTGAAGGAG+AGG | - | chr1.4:25887288-25887307 | MS.gene063197:intron | 65.0% | |
| TTGACGGCTGCTGCTGCGAC+AGG | - | chr1.4:25887602-25887621 | MS.gene063197:CDS | 65.0% | |
| ! | GCCGCAACTGCTGCTTCGTC+AGG | - | chr1.4:25887407-25887426 | MS.gene063197:CDS | 65.0% |
| !! | AGCGTCGGCTGCCACATTGG+TGG | - | chr1.4:25887472-25887491 | MS.gene063197:CDS | 65.0% |
| !! | GGTAATGGTGGTGGGGGCAG+TGG | - | chr1.4:25887987-25888006 | MS.gene063197:intron | 65.0% |
| !! | GGTAGCGTCGGCTGCCACAT+TGG | - | chr1.4:25887469-25887488 | MS.gene063197:CDS | 65.0% |
| AGAGTCTCTGCCACCGGCGG+TGG | - | chr1.4:25887245-25887264 | MS.gene063197:intron | 70.0% | |
| GACGGTGGGGAGGTGGCTGA+AGG | - | chr1.4:25887283-25887302 | MS.gene063197:intron | 70.0% | |
| GAGGCGGAGGGAAGACGGTG+GGG | - | chr1.4:25887270-25887289 | MS.gene063197:intron | 70.0% | |
| GAGGGAAGACGGTGGGGAGG+TGG | - | chr1.4:25887276-25887295 | MS.gene063197:intron | 70.0% | |
| GGAGGCGGAGGGAAGACGGT+GGG | - | chr1.4:25887269-25887288 | MS.gene063197:intron | 70.0% | |
| TGGCGGAGGCGGAGGGAAGA+CGG | - | chr1.4:25887265-25887284 | MS.gene063197:intron | 70.0% | |
| CGGAGGCGGAGGGAAGACGG+TGG | - | chr1.4:25887268-25887287 | MS.gene063197:intron | 75.0% | |
| GCGGAGGGAAGACGGTGGGG+AGG | - | chr1.4:25887273-25887292 | MS.gene063197:intron | 75.0% | |
| GTCTCTGCCACCGGCGGTGG+CGG | - | chr1.4:25887248-25887267 | MS.gene063197:intron | 75.0% | |
| !! | TCTGCCACCGGCGGTGGCGG+AGG | - | chr1.4:25887251-25887270 | MS.gene063197:intron | 80.0% |
| ! | CCCTCCGCCTCCGCCACCGC+CGG | + | chr1.4:25887261-25887280 | None:intergenic | 85.0% |
| ! | TCCGCCTCCGCCACCGCCGG+TGG | + | chr1.4:25887258-25887277 | None:intergenic | 85.0% |
| !!! | ACCGGCGGTGGCGGAGGCGG+AGG | - | chr1.4:25887257-25887276 | MS.gene063197:intron | 85.0% |
| !!! | CCGGCGGTGGCGGAGGCGGA+GGG | - | chr1.4:25887258-25887277 | MS.gene063197:intron | 85.0% |
| !!! | GCCACCGGCGGTGGCGGAGG+CGG | - | chr1.4:25887254-25887273 | MS.gene063197:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 25885857 | 25889078 | 25885857 | ID=MS.gene063197 |
| chr1.4 | mRNA | 25885857 | 25889078 | 25885857 | ID=MS.gene063197.t1;Parent=MS.gene063197 |
| chr1.4 | exon | 25888968 | 25889078 | 25888968 | ID=MS.gene063197.t1.exon1;Parent=MS.gene063197.t1 |
| chr1.4 | CDS | 25888968 | 25889078 | 25888968 | ID=cds.MS.gene063197.t1;Parent=MS.gene063197.t1 |
| chr1.4 | exon | 25887312 | 25887753 | 25887312 | ID=MS.gene063197.t1.exon2;Parent=MS.gene063197.t1 |
| chr1.4 | CDS | 25887312 | 25887753 | 25887312 | ID=cds.MS.gene063197.t1;Parent=MS.gene063197.t1 |
| chr1.4 | exon | 25886804 | 25887049 | 25886804 | ID=MS.gene063197.t1.exon3;Parent=MS.gene063197.t1 |
| chr1.4 | CDS | 25886804 | 25887049 | 25886804 | ID=cds.MS.gene063197.t1;Parent=MS.gene063197.t1 |
| chr1.4 | exon | 25886166 | 25886215 | 25886166 | ID=MS.gene063197.t1.exon4;Parent=MS.gene063197.t1 |
| chr1.4 | CDS | 25886166 | 25886215 | 25886166 | ID=cds.MS.gene063197.t1;Parent=MS.gene063197.t1 |
| chr1.4 | exon | 25885857 | 25885914 | 25885857 | ID=MS.gene063197.t1.exon5;Parent=MS.gene063197.t1 |
| chr1.4 | CDS | 25885857 | 25885914 | 25885857 | ID=cds.MS.gene063197.t1;Parent=MS.gene063197.t1 |
| Gene Sequence |
| Protein sequence |
