Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063536.t1 | 6NIB_A | 98.3 | 344 | 6 | 0 | 1 | 344 | 24 | 367 | 2.50E-204 | 721.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063536.t1 | Q8GWW7 | 73.8 | 343 | 90 | 0 | 1 | 343 | 31 | 373 | 1.1e-155 | 550.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063536.t1 | G7JT50 | 98.3 | 344 | 6 | 0 | 1 | 344 | 31 | 374 | 1.8e-204 | 721.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051525 | MS.gene063536 | 0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene051588 | MS.gene063536 | 0.811983 | 5.33E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene063536 | 0.812765 | 3.60E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene063536 | 0.818001 | 2.46E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene063536 | 0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene063536 | 0.806336 | 8.64E-50 | -1.69E-46 |
| MS.gene056346 | MS.gene063536 | 0.804859 | 1.76E-49 | -1.69E-46 |
| MS.gene056514 | MS.gene063536 | 0.819555 | 1.09E-52 | -1.69E-46 |
| MS.gene057476 | MS.gene063536 | 0.805065 | 1.60E-49 | -1.69E-46 |
| MS.gene058529 | MS.gene063536 | 0.819982 | 8.72E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene063536 | 0.814234 | 1.71E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene063536 | 0.80256 | 5.29E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene063536 | 0.80524 | 1.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063536.t1 | MTR_4g112810 | 98.256 | 344 | 6 | 0 | 1 | 344 | 31 | 374 | 0.0 | 703 |
| MS.gene063536.t1 | MTR_4g110140 | 61.517 | 356 | 90 | 5 | 1 | 322 | 31 | 373 | 4.32e-142 | 409 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063536.t1 | AT5G08170 | 73.761 | 343 | 90 | 0 | 1 | 343 | 25 | 367 | 0.0 | 541 |
| MS.gene063536.t1 | AT5G08170 | 73.761 | 343 | 90 | 0 | 1 | 343 | 31 | 373 | 0.0 | 538 |
| MS.gene063536.t1 | AT5G08170 | 74.048 | 289 | 75 | 0 | 55 | 343 | 1 | 289 | 5.77e-165 | 462 |
| MS.gene063536.t1 | AT5G08170 | 74.048 | 289 | 75 | 0 | 55 | 343 | 1 | 289 | 5.77e-165 | 462 |
| MS.gene063536.t1 | AT5G08170 | 74.048 | 289 | 75 | 0 | 55 | 343 | 1 | 289 | 5.77e-165 | 462 |
Find 84 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATCATTGCTCCACAATT+TGG | 0.199735 | 8.1:+15346701 | MS.gene063536:CDS |
| CCTTAAGTTCATCCTCTATT+TGG | 0.200717 | 8.1:-15344469 | None:intergenic |
| AGATTAGCTCCAACGATTCT+TGG | 0.296878 | 8.1:+15343540 | MS.gene063536:CDS |
| CATGATCCGGTAGCTGATTC+CGG | 0.299009 | 8.1:-15343505 | None:intergenic |
| GTTGAGAGAATATTTCTAAA+TGG | 0.323501 | 8.1:-15347377 | None:intergenic |
| TGGTTGCCTCATGGATTATA+TGG | 0.334289 | 8.1:+15344518 | MS.gene063536:CDS |
| TTGGAGTTAGGAAGGTTATA+TGG | 0.342843 | 8.1:+15344498 | MS.gene063536:CDS |
| TTGTGGGAATTGAAGGTTCC+AGG | 0.350594 | 8.1:+15347302 | MS.gene063536:CDS |
| TTAAGGCATATCTTGGAGTT+AGG | 0.360625 | 8.1:+15344486 | MS.gene063536:CDS |
| GACAGGAACGCGCCGATAAT+TGG | 0.368550 | 8.1:+15343062 | None:intergenic |
| TGACTGGACTTTCAATAGTT+GGG | 0.371650 | 8.1:+15343738 | MS.gene063536:CDS |
| GGAGCCAAGCCAAGGCTTCC+TGG | 0.371687 | 8.1:+15346632 | MS.gene063536:CDS |
| TCTTTCTCAGTCATGTATAA+TGG | 0.381846 | 8.1:-15345616 | None:intergenic |
| TCCTAGGTTGTGGGAATTGA+AGG | 0.384816 | 8.1:+15347295 | MS.gene063536:intron |
| TTGACTGGACTTTCAATAGT+TGG | 0.389120 | 8.1:+15343737 | MS.gene063536:CDS |
| TCCCATTCTATGGTGCTTGA+AGG | 0.402654 | 8.1:+15344088 | MS.gene063536:CDS |
| GGAAGGTCTTAGACAGAATT+CGG | 0.404780 | 8.1:-15346751 | None:intergenic |
| AAGATGGATGTTACTGTGAT+TGG | 0.407228 | 8.1:+15343917 | MS.gene063536:CDS |
| CTTGTTCAATAGACACTCTT+CGG | 0.412003 | 8.1:-15344420 | None:intergenic |
| CTGGTGTGGTTCTTCTGTCT+TGG | 0.415700 | 8.1:+15345476 | MS.gene063536:CDS |
| ACCATAGAATGGGAAAATCT+AGG | 0.420979 | 8.1:-15344079 | None:intergenic |
| GGCACCGTCACGCCAATTAT+CGG | 0.422589 | 8.1:-15343074 | None:intergenic |
| GATGAACTTAAGGCATATCT+TGG | 0.425040 | 8.1:+15344479 | MS.gene063536:CDS |
| CGCCTTCAAGCACCATAGAA+TGG | 0.425702 | 8.1:-15344090 | None:intergenic |
| CCAAATAGAGGATGAACTTA+AGG | 0.428188 | 8.1:+15344469 | MS.gene063536:CDS |
| GATGCGGAGCATAGGATTGC+GGG | 0.431755 | 8.1:+15343712 | MS.gene063536:CDS |
| ATGATCCGGTAGCTGATTCC+GGG | 0.431760 | 8.1:-15343504 | None:intergenic |
| ATTTGGCTCTTACTCAAATG+TGG | 0.433728 | 8.1:-15344452 | None:intergenic |
| CTCAGTCATGTATAATGGAC+CGG | 0.444715 | 8.1:-15345611 | None:intergenic |
| GGCGGAAGCATCCATGTAGA+TGG | 0.446962 | 8.1:+15344109 | MS.gene063536:CDS |
| GTGATCAAACTCCATGTTCC+CGG | 0.448519 | 8.1:+15345592 | MS.gene063536:CDS |
| TCAAGTATAACTGATGCTAA+TGG | 0.454381 | 8.1:+15345556 | MS.gene063536:CDS |
| AGAGAATATTTCTAAATGGC+TGG | 0.455579 | 8.1:-15347373 | None:intergenic |
| AAATGTTTAGGTTTAGAAGA+TGG | 0.456598 | 8.1:+15343901 | MS.gene063536:intron |
| GCCTTCAAGCACCATAGAAT+GGG | 0.457536 | 8.1:-15344089 | None:intergenic |
| AGTGTCTATTGAACAAGAAC+AGG | 0.457681 | 8.1:+15344426 | MS.gene063536:CDS |
| CGTTTGTGCTAGTTCAGCTC+AGG | 0.468384 | 8.1:+15343159 | MS.gene063536:CDS |
| TTTGGCTCTTACTCAAATGT+GGG | 0.487275 | 8.1:-15344451 | None:intergenic |
| ATTATACATGACTGAGAAAG+AGG | 0.489453 | 8.1:+15345618 | MS.gene063536:CDS |
| AATCCTATGCTCCGCATCAT+CGG | 0.491261 | 8.1:-15343707 | None:intergenic |
| ATAGGATTGCGGGAATTGAC+TGG | 0.492124 | 8.1:+15343722 | MS.gene063536:CDS |
| TGTATAATGGACCGGGAACA+TGG | 0.510017 | 8.1:-15345603 | None:intergenic |
| AGAGATTGCAGCCGCCACTC+TGG | 0.511265 | 8.1:-15343119 | None:intergenic |
| CTGAGCTGAACTAGCACAAA+CGG | 0.515091 | 8.1:-15343158 | None:intergenic |
| AGTACCAGGAAGCCTTGGCT+TGG | 0.515607 | 8.1:-15346636 | None:intergenic |
| GGCATATCTTGGAGTTAGGA+AGG | 0.517285 | 8.1:+15344490 | MS.gene063536:CDS |
| TCAACGACTCTAACATGATC+CGG | 0.518148 | 8.1:-15343518 | None:intergenic |
| ATGACTGAGAAAGAGGCTGC+TGG | 0.520293 | 8.1:+15345625 | MS.gene063536:CDS |
| ACCTGACAAAACAATCTCCC+TGG | 0.521534 | 8.1:-15347320 | None:intergenic |
| TGACTGAGAAAGAGGCTGCT+GGG | 0.523464 | 8.1:+15345626 | MS.gene063536:CDS |
| AGTCTAGTACCAGGAAGCCT+TGG | 0.524063 | 8.1:-15346641 | None:intergenic |
| GACTGGACTTTCAATAGTTG+GGG | 0.526517 | 8.1:+15343739 | MS.gene063536:CDS |
| GTCACGAAACCAAGAATCGT+TGG | 0.536081 | 8.1:-15343549 | None:intergenic |
| GACTGAGAAAGAGGCTGCTG+GGG | 0.537133 | 8.1:+15345627 | MS.gene063536:CDS |
| AAACACAAGTTGAGCATGAA+CGG | 0.539621 | 8.1:-15343095 | None:intergenic |
| AAGGTTATATGGTTGCCTCA+TGG | 0.541390 | 8.1:+15344509 | MS.gene063536:CDS |
| TTTGAGTAAGAGCCAAATAG+AGG | 0.541729 | 8.1:+15344457 | MS.gene063536:CDS |
| ACAGGAGATGATGATACAAA+TGG | 0.542165 | 8.1:+15345421 | MS.gene063536:intron |
| GATTCTTGGTTTCGTGACAT+TGG | 0.542389 | 8.1:+15343554 | MS.gene063536:CDS |
| TGCAATGTAAAAGTTTACAT+AGG | 0.549734 | 8.1:-15346672 | None:intergenic |
| CGCGCCGATAATTGGCGTGA+CGG | 0.553368 | 8.1:+15343070 | MS.gene063536:CDS |
| TTTGTTGATTCCTAGGTTGT+GGG | 0.556323 | 8.1:+15347286 | MS.gene063536:intron |
| AAAATACTCACTTCATGATG+AGG | 0.559236 | 8.1:-15346773 | None:intergenic |
| TTGTTTAACAGTTTGTAGTG+AGG | 0.572818 | 8.1:+15343668 | MS.gene063536:intron |
| AATCCGATGATGCGGAGCAT+AGG | 0.574874 | 8.1:+15343704 | MS.gene063536:CDS |
| TCTCACCTTCTCCATCTACA+TGG | 0.576000 | 8.1:-15344120 | None:intergenic |
| TCTTCAGATCTTTCATACTG+AGG | 0.576852 | 8.1:-15345517 | None:intergenic |
| TGTGGGAATTGAAGGTTCCA+GGG | 0.582236 | 8.1:+15347303 | MS.gene063536:CDS |
| CATTCTATGGTGCTTGAAGG+CGG | 0.592030 | 8.1:+15344091 | MS.gene063536:CDS |
| AACATTGAAATCCGATGATG+CGG | 0.592828 | 8.1:+15343696 | MS.gene063536:CDS |
| GAATGCCCGGAATCAGCTAC+CGG | 0.593981 | 8.1:+15343499 | MS.gene063536:CDS |
| AAATACTCACTTCATGATGA+GGG | 0.594366 | 8.1:-15346772 | None:intergenic |
| TCAACTTGTGTTTGCCAGAG+TGG | 0.603974 | 8.1:+15343105 | MS.gene063536:CDS |
| GAAGCAGCAAGTCTAGTACC+AGG | 0.605026 | 8.1:-15346650 | None:intergenic |
| CAAGACAGAAGAACCACACC+AGG | 0.606639 | 8.1:-15345475 | None:intergenic |
| AGGATGATGGAGCCAAGCCA+AGG | 0.607977 | 8.1:+15346624 | MS.gene063536:intron |
| TGGACTTTCAATAGTTGGGG+AGG | 0.614804 | 8.1:+15343742 | MS.gene063536:CDS |
| AGCATCCATGTAGATGGAGA+AGG | 0.617041 | 8.1:+15344115 | MS.gene063536:CDS |
| TCAGTCATGTATAATGGACC+GGG | 0.622248 | 8.1:-15345610 | None:intergenic |
| ACTCACTTCATGATGAGGGA+AGG | 0.632244 | 8.1:-15346768 | None:intergenic |
| TGATGCGGAGCATAGGATTG+CGG | 0.633163 | 8.1:+15343711 | MS.gene063536:CDS |
| ACTTGTGTTTGCCAGAGTGG+CGG | 0.660221 | 8.1:+15343108 | MS.gene063536:CDS |
| GTTCAATAGACACTCTTCGG+TGG | 0.670209 | 8.1:-15344417 | None:intergenic |
| TACATACCATATAATCCATG+AGG | 0.692612 | 8.1:-15344524 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAATTTATTTTTTT+TGG | + | chr8.1:15346790-15346809 | MS.gene063536:intron | 0.0% |
| !! | ATAAATTAGATTTAGATATT+GGG | + | chr8.1:15346335-15346354 | MS.gene063536:intron | 10.0% |
| !! | AATTTCTGATTTATAAGTAT+TGG | - | chr8.1:15343233-15343252 | None:intergenic | 15.0% |
| !! | ACGATTTATAACAATTAAAA+TGG | - | chr8.1:15343201-15343220 | None:intergenic | 15.0% |
| !! | ATCTATAAAATCATGATAAA+TGG | - | chr8.1:15344639-15344658 | None:intergenic | 15.0% |
| !! | ATTTCTGATTTATAAGTATT+GGG | - | chr8.1:15343232-15343251 | None:intergenic | 15.0% |
| !! | CATAAATTAGATTTAGATAT+TGG | + | chr8.1:15346334-15346353 | MS.gene063536:intron | 15.0% |
| !! | TTCATGAAAAAATTACATTT+AGG | - | chr8.1:15344209-15344228 | None:intergenic | 15.0% |
| !!! | ATTTTAATTGTTATAAATCG+TGG | + | chr8.1:15343200-15343219 | MS.gene063536:intron | 15.0% |
| !!! | TCTACAATAATTTGATAATT+AGG | + | chr8.1:15346142-15346161 | MS.gene063536:intron | 15.0% |
| !!! | TTGAGTTTTATAAAATGTTT+AGG | + | chr8.1:15343889-15343908 | MS.gene063536:intron | 15.0% |
| !! | AAAAAGAAAGAAACACAATT+TGG | - | chr8.1:15345669-15345688 | None:intergenic | 20.0% |
| !! | AGCAATAATATCAATTCATA+GGG | - | chr8.1:15344582-15344601 | None:intergenic | 20.0% |
| !! | ATACTTCTTAATAACAACAT+AGG | - | chr8.1:15345391-15345410 | None:intergenic | 20.0% |
| !! | ATGAAAAAATTACATTTAGG+TGG | - | chr8.1:15344206-15344225 | None:intergenic | 20.0% |
| !! | CATTAAGAGTTAAATATAAC+TGG | - | chr8.1:15345692-15345711 | None:intergenic | 20.0% |
| !! | GTAGAATAAAAATACAATTG+AGG | - | chr8.1:15345056-15345075 | None:intergenic | 20.0% |
| !! | TAAATCAGAAATTATAACGA+TGG | + | chr8.1:15343240-15343259 | MS.gene063536:intron | 20.0% |
| !! | TAATAGGCAAATTCTAATAT+GGG | - | chr8.1:15343416-15343435 | None:intergenic | 20.0% |
| !! | TCAATTTGAAGACTAATTAA+TGG | + | chr8.1:15343805-15343824 | MS.gene063536:intron | 20.0% |
| !! | TTGAATTGATTATTATGTCT+TGG | + | chr8.1:15343847-15343866 | MS.gene063536:intron | 20.0% |
| !! | TTTAAATTGAACACTGTAAA+AGG | + | chr8.1:15346308-15346327 | MS.gene063536:intron | 20.0% |
| !! | TTTATTCTACAAATTGAATC+AGG | + | chr8.1:15345066-15345085 | MS.gene063536:intron | 20.0% |
| !!! | ATGTAATTTTTTCATGAATG+AGG | + | chr8.1:15344211-15344230 | MS.gene063536:intron | 20.0% |
| ! | AAAATCTACCAAACATGTAT+TGG | - | chr8.1:15344043-15344062 | None:intergenic | 25.0% |
| ! | AATAAGTATTTACCATGAAC+TGG | - | chr8.1:15344771-15344790 | None:intergenic | 25.0% |
| ! | AATAGGCAAATTCTAATATG+GGG | - | chr8.1:15343415-15343434 | None:intergenic | 25.0% |
| ! | ACAAATTATCAGAACGTAAT+AGG | - | chr8.1:15343432-15343451 | None:intergenic | 25.0% |
| ! | ACAATTTGGAGATAAAAAGT+GGG | + | chr8.1:15346715-15346734 | MS.gene063536:CDS | 25.0% |
| ! | ATCAATTCAATGAATCACAT+TGG | - | chr8.1:15343837-15343856 | None:intergenic | 25.0% |
| ! | ATGAATTGATATTATTGCTC+AGG | + | chr8.1:15344583-15344602 | MS.gene063536:intron | 25.0% |
| ! | ATTTGATGCTTTCAAATGAT+AGG | + | chr8.1:15345846-15345865 | MS.gene063536:intron | 25.0% |
| ! | GAGCAATAATATCAATTCAT+AGG | - | chr8.1:15344583-15344602 | None:intergenic | 25.0% |
| ! | GTAATAGGCAAATTCTAATA+TGG | - | chr8.1:15343417-15343436 | None:intergenic | 25.0% |
| ! | GTTTATGAACTGTAACATTT+AGG | + | chr8.1:15347218-15347237 | MS.gene063536:intron | 25.0% |
| ! | TAGTACTATAATGAAACTAC+TGG | - | chr8.1:15347163-15347182 | None:intergenic | 25.0% |
| ! | TATAATGAAACTACTGGATT+GGG | - | chr8.1:15347157-15347176 | None:intergenic | 25.0% |
| ! | TGCAATGTAAAAGTTTACAT+AGG | - | chr8.1:15346675-15346694 | None:intergenic | 25.0% |
| ! | TTAAAACGAAGTTTAAGCAT+TGG | + | chr8.1:15345880-15345899 | MS.gene063536:intron | 25.0% |
| !! | AAATGTTTAGGTTTAGAAGA+TGG | + | chr8.1:15343901-15343920 | MS.gene063536:intron | 25.0% |
| !! | AATACATGTTTGGTAGATTT+TGG | + | chr8.1:15344042-15344061 | MS.gene063536:intron | 25.0% |
| !! | GGTGTAATTCTATATTTTTC+AGG | + | chr8.1:15346604-15346623 | MS.gene063536:intron | 25.0% |
| !! | GTAAACTTTTACATTGCAAA+TGG | + | chr8.1:15346677-15346696 | MS.gene063536:CDS | 25.0% |
| !! | TAAAGGTCTAATCATTTTCA+CGG | - | chr8.1:15343332-15343351 | None:intergenic | 25.0% |
| !! | TCATATTGATTATCACAGAA+TGG | + | chr8.1:15344920-15344939 | MS.gene063536:intron | 25.0% |
| !! | TTTTCAAAAGCAATTCAGTA+AGG | - | chr8.1:15344343-15344362 | None:intergenic | 25.0% |
| !! | TTTTTCATATAATGAGTTGC+AGG | - | chr8.1:15346454-15346473 | None:intergenic | 25.0% |
| !!! | ACTGAATATTTGTTTTTGGT+TGG | + | chr8.1:15346008-15346027 | MS.gene063536:intron | 25.0% |
| !!! | ACTTCGTTTTAACCAATATA+AGG | - | chr8.1:15345872-15345891 | None:intergenic | 25.0% |
| !!! | AGAAGTATGTTGTTTTATAC+AGG | + | chr8.1:15345403-15345422 | MS.gene063536:intron | 25.0% |
| !!! | AGAGACTGAATATTTGTTTT+TGG | + | chr8.1:15346004-15346023 | MS.gene063536:intron | 25.0% |
| !!! | TAGTTGCATTTTTCAAGTAT+TGG | + | chr8.1:15346037-15346056 | MS.gene063536:intron | 25.0% |
| !!! | TATAATGTTTGTTGATTCCT+AGG | + | chr8.1:15347279-15347298 | MS.gene063536:intron | 25.0% |
| !!! | TGGCTATTTTTGAATTAAGA+TGG | - | chr8.1:15345004-15345023 | None:intergenic | 25.0% |
| !!! | TTCTATATTTTTCAGGATGA+TGG | + | chr8.1:15346611-15346630 | MS.gene063536:intron | 25.0% |
| !!! | TTCTTACAACTTTTTCTTTG+AGG | + | chr8.1:15345127-15345146 | MS.gene063536:intron | 25.0% |
| !!! | TTGTTTCTAATTATGTGCTT+TGG | + | chr8.1:15343448-15343467 | MS.gene063536:intron | 25.0% |
| !!! | TTTTAGAGTGAAACAAAGTA+TGG | + | chr8.1:15344958-15344977 | MS.gene063536:intron | 25.0% |
| AAAATACTCACTTCATGATG+AGG | - | chr8.1:15346776-15346795 | None:intergenic | 30.0% | |
| AAATACTCACTTCATGATGA+GGG | - | chr8.1:15346775-15346794 | None:intergenic | 30.0% | |
| AAGGATATCTAAGTTTCAAG+CGG | - | chr8.1:15344324-15344343 | None:intergenic | 30.0% | |
| AATTCAAAAATAGCCAAGTC+TGG | + | chr8.1:15345008-15345027 | MS.gene063536:intron | 30.0% | |
| ACAGAGACACTCTAATAAAT+GGG | + | chr8.1:15345322-15345341 | MS.gene063536:intron | 30.0% | |
| ATAAATGGGATACACGATTT+AGG | + | chr8.1:15345336-15345355 | MS.gene063536:intron | 30.0% | |
| ATCGCTTATTCATGATGATT+TGG | - | chr8.1:15347094-15347113 | None:intergenic | 30.0% | |
| ATCTGAGTAGTAAATGCAAT+AGG | - | chr8.1:15346253-15346272 | None:intergenic | 30.0% | |
| ATGTTATTAATACCCAGACT+TGG | - | chr8.1:15345024-15345043 | None:intergenic | 30.0% | |
| ATTATACATGACTGAGAAAG+AGG | + | chr8.1:15345618-15345637 | MS.gene063536:CDS | 30.0% | |
| ATTCAAAAATAGCCAAGTCT+GGG | + | chr8.1:15345009-15345028 | MS.gene063536:intron | 30.0% | |
| ATTGTAGAGATGCAATCATA+GGG | - | chr8.1:15346130-15346149 | None:intergenic | 30.0% | |
| CACAATTTGGAGATAAAAAG+TGG | + | chr8.1:15346714-15346733 | MS.gene063536:CDS | 30.0% | |
| CTATAATGAAACTACTGGAT+TGG | - | chr8.1:15347158-15347177 | None:intergenic | 30.0% | |
| GAGTTAATGCAGTGATTTAT+TGG | + | chr8.1:15344141-15344160 | MS.gene063536:intron | 30.0% | |
| GATATTACATCCTATCCTAT+TGG | - | chr8.1:15346204-15346223 | None:intergenic | 30.0% | |
| GATTATTATGTCTTGGTTGT+TGG | + | chr8.1:15343854-15343873 | MS.gene063536:intron | 30.0% | |
| TACAAATTGAATCAGGAAGT+TGG | + | chr8.1:15345073-15345092 | MS.gene063536:intron | 30.0% | |
| TACACAATATAAACCTCTAC+TGG | + | chr8.1:15346574-15346593 | MS.gene063536:intron | 30.0% | |
| TACATACCATATAATCCATG+AGG | - | chr8.1:15344527-15344546 | None:intergenic | 30.0% | |
| TATCCTATTGGAAACAAAAC+TGG | - | chr8.1:15346192-15346211 | None:intergenic | 30.0% | |
| TATTCATTCTTAACCATACC+AGG | - | chr8.1:15346511-15346530 | None:intergenic | 30.0% | |
| TATTGTAGAGATGCAATCAT+AGG | - | chr8.1:15346131-15346150 | None:intergenic | 30.0% | |
| TCAAGTATAACTGATGCTAA+TGG | + | chr8.1:15345556-15345575 | MS.gene063536:CDS | 30.0% | |
| TCTAATAAATATCCCAGCTT+GGG | - | chr8.1:15345295-15345314 | None:intergenic | 30.0% | |
| TCTAATTATGTGCTTTGGTT+TGG | + | chr8.1:15343453-15343472 | MS.gene063536:intron | 30.0% | |
| TCTTTCTCAGTCATGTATAA+TGG | - | chr8.1:15345619-15345638 | None:intergenic | 30.0% | |
| TGAACTAATTGAGTAAGATC+TGG | - | chr8.1:15344903-15344922 | None:intergenic | 30.0% | |
| TGGATGTAGTGTTTCTTTAA+TGG | + | chr8.1:15346057-15346076 | MS.gene063536:intron | 30.0% | |
| TGTTAAAAAGAAGGTTAGGT+TGG | + | chr8.1:15343954-15343973 | MS.gene063536:intron | 30.0% | |
| TTGTTTAACAGTTTGTAGTG+AGG | + | chr8.1:15343668-15343687 | MS.gene063536:intron | 30.0% | |
| ! | ACCTAACCTTCTTTTTAACA+AGG | - | chr8.1:15343954-15343973 | None:intergenic | 30.0% |
| ! | AGTTTTTCTGACCATTTTCA+GGG | + | chr8.1:15343587-15343606 | MS.gene063536:intron | 30.0% |
| ! | ATACACGATTTAGGTTCAAA+AGG | + | chr8.1:15345345-15345364 | MS.gene063536:intron | 30.0% |
| ! | TCAAATGATAGGCCTTATAT+TGG | + | chr8.1:15345857-15345876 | MS.gene063536:intron | 30.0% |
| ! | TTTTCATGAATGAGGATTAG+TGG | + | chr8.1:15344219-15344238 | MS.gene063536:intron | 30.0% |
| !! | AGTGTATCTTTGTTTCTGTA+TGG | + | chr8.1:15345767-15345786 | MS.gene063536:intron | 30.0% |
| !! | CACTTTTTATCTCCAAATTG+TGG | - | chr8.1:15346716-15346735 | None:intergenic | 30.0% |
| !! | CTTATTCATGATGATTTGGT+TGG | - | chr8.1:15347090-15347109 | None:intergenic | 30.0% |
| !! | CTTTGTTTCACTCTAAAATG+CGG | - | chr8.1:15344956-15344975 | None:intergenic | 30.0% |
| !! | TCTTGAACATTTTCAAGCAT+TGG | + | chr8.1:15343382-15343401 | MS.gene063536:intron | 30.0% |
| !! | TGATTTATAAGTATTGGGCT+GGG | - | chr8.1:15343227-15343246 | None:intergenic | 30.0% |
| !! | TTTGAAAGCATCAAATCATC+TGG | - | chr8.1:15345842-15345861 | None:intergenic | 30.0% |
| !!! | AGTTTTGTTTCCAATAGGAT+AGG | + | chr8.1:15346191-15346210 | MS.gene063536:intron | 30.0% |
| !!! | CATTGGTTTTATGTTGACTT+CGG | - | chr8.1:15344703-15344722 | None:intergenic | 30.0% |
| !!! | GTATCACTTTTGAGTTGTTT+TGG | + | chr8.1:15347240-15347259 | MS.gene063536:intron | 30.0% |
| AACATTGAAATCCGATGATG+CGG | + | chr8.1:15343696-15343715 | MS.gene063536:CDS | 35.0% | |
| AAGATGGATGTTACTGTGAT+TGG | + | chr8.1:15343917-15343936 | MS.gene063536:CDS | 35.0% | |
| ACAGGAGATGATGATACAAA+TGG | + | chr8.1:15345421-15345440 | MS.gene063536:intron | 35.0% | |
| ACCATAGAATGGGAAAATCT+AGG | - | chr8.1:15344082-15344101 | None:intergenic | 35.0% | |
| AGATACACTCTGATGGTAAT+AGG | - | chr8.1:15345756-15345775 | None:intergenic | 35.0% | |
| AGATTGATTGATACCTGGTA+TGG | + | chr8.1:15346495-15346514 | MS.gene063536:intron | 35.0% | |
| AGTGGACAGCAAAAATTCTT+AGG | - | chr8.1:15345967-15345986 | None:intergenic | 35.0% | |
| AGTGTCTATTGAACAAGAAC+AGG | + | chr8.1:15344426-15344445 | MS.gene063536:CDS | 35.0% | |
| ATTTCGTCTCTCAGAAGTAA+AGG | - | chr8.1:15343349-15343368 | None:intergenic | 35.0% | |
| CACAGAGACACTCTAATAAA+TGG | + | chr8.1:15345321-15345340 | MS.gene063536:intron | 35.0% | |
| CCAAATAGAGGATGAACTTA+AGG | + | chr8.1:15344469-15344488 | MS.gene063536:CDS | 35.0% | |
| CCTTAAGTTCATCCTCTATT+TGG | - | chr8.1:15344472-15344491 | None:intergenic | 35.0% | |
| CGAAGTCAACATAAAACCAA+TGG | + | chr8.1:15344701-15344720 | MS.gene063536:intron | 35.0% | |
| CTTGTTCAATAGACACTCTT+CGG | - | chr8.1:15344423-15344442 | None:intergenic | 35.0% | |
| GAAACAAAGATACACTCTGA+TGG | - | chr8.1:15345763-15345782 | None:intergenic | 35.0% | |
| GATGAACTTAAGGCATATCT+TGG | + | chr8.1:15344479-15344498 | MS.gene063536:CDS | 35.0% | |
| GTCTAATAAATATCCCAGCT+TGG | - | chr8.1:15345296-15345315 | None:intergenic | 35.0% | |
| TAATACATGTTCCTGAAGGA+AGG | - | chr8.1:15344397-15344416 | None:intergenic | 35.0% | |
| TAGCAAGATTGATTGATACC+TGG | + | chr8.1:15346490-15346509 | MS.gene063536:intron | 35.0% | |
| TCAAAGAATTGCCCTGAAAA+TGG | - | chr8.1:15343601-15343620 | None:intergenic | 35.0% | |
| TCTTCAGATCTTTCATACTG+AGG | - | chr8.1:15345520-15345539 | None:intergenic | 35.0% | |
| TGACACTACCAATACATGTT+TGG | + | chr8.1:15344032-15344051 | MS.gene063536:intron | 35.0% | |
| TGACTGGACTTTCAATAGTT+GGG | + | chr8.1:15343738-15343757 | MS.gene063536:CDS | 35.0% | |
| TGATGTTTAATCACAAGAGC+TGG | - | chr8.1:15344179-15344198 | None:intergenic | 35.0% | |
| TGGCAAGAGAATAACTTATG+TGG | + | chr8.1:15344842-15344861 | MS.gene063536:intron | 35.0% | |
| TGGTTAAATGGTAACCTCAA+AGG | + | chr8.1:15346093-15346112 | MS.gene063536:intron | 35.0% | |
| TGTTTCTTTAATGGAGTCTC+TGG | + | chr8.1:15346066-15346085 | MS.gene063536:intron | 35.0% | |
| TTAAGGCATATCTTGGAGTT+AGG | + | chr8.1:15344486-15344505 | MS.gene063536:CDS | 35.0% | |
| TTATATAGCTGCATCTGCAA+TGG | - | chr8.1:15344736-15344755 | None:intergenic | 35.0% | |
| TTCATCTGAATCCTTCAAAG+TGG | - | chr8.1:15345985-15346004 | None:intergenic | 35.0% | |
| TTGACTGGACTTTCAATAGT+TGG | + | chr8.1:15343737-15343756 | MS.gene063536:CDS | 35.0% | |
| TTGGAGTTAGGAAGGTTATA+TGG | + | chr8.1:15344498-15344517 | MS.gene063536:CDS | 35.0% | |
| TTTCCAAGTGATGAAGTTTG+TGG | + | chr8.1:15346950-15346969 | MS.gene063536:intron | 35.0% | |
| TTTGAGTAAGAGCCAAATAG+AGG | + | chr8.1:15344457-15344476 | MS.gene063536:CDS | 35.0% | |
| ! | AAACACAAGTTGAGCATGAA+CGG | - | chr8.1:15343098-15343117 | None:intergenic | 35.0% |
| ! | AATGAGGATTAGTGGCAATT+AGG | + | chr8.1:15344227-15344246 | MS.gene063536:intron | 35.0% |
| ! | AGTTTAAGATGTCATGTTCG+CGG | + | chr8.1:15345801-15345820 | MS.gene063536:intron | 35.0% |
| ! | ATTTATTCACGTTCTAGCTG+TGG | + | chr8.1:15343992-15344011 | MS.gene063536:intron | 35.0% |
| ! | CATTTATTAGAGTGTCTCTG+TGG | - | chr8.1:15345323-15345342 | None:intergenic | 35.0% |
| ! | GAGTTTTTCTGACCATTTTC+AGG | + | chr8.1:15343586-15343605 | MS.gene063536:intron | 35.0% |
| ! | GCCTTGTTAAAAAGAAGGTT+AGG | + | chr8.1:15343950-15343969 | MS.gene063536:intron | 35.0% |
| ! | GGTCTATATAGTTTTCCATG+TGG | - | chr8.1:15345946-15345965 | None:intergenic | 35.0% |
| ! | TAGCAATTTTTCCTTCCTTC+AGG | + | chr8.1:15344383-15344402 | MS.gene063536:intron | 35.0% |
| ! | TCCTAGATTTTCCCATTCTA+TGG | + | chr8.1:15344078-15344097 | MS.gene063536:CDS | 35.0% |
| !! | ATTTGGCTCTTACTCAAATG+TGG | - | chr8.1:15344455-15344474 | None:intergenic | 35.0% |
| !! | ATTTTTGCTGTCCACTTTGA+AGG | + | chr8.1:15345971-15345990 | MS.gene063536:intron | 35.0% |
| !! | CTGATTTATAAGTATTGGGC+TGG | - | chr8.1:15343228-15343247 | None:intergenic | 35.0% |
| !! | GTTCGGTTCATGATTTTAGT+GGG | + | chr8.1:15343475-15343494 | MS.gene063536:intron | 35.0% |
| !! | TTATGTGCTTTGGTTTGGTT+CGG | + | chr8.1:15343458-15343477 | MS.gene063536:intron | 35.0% |
| !! | TTTGGCTCTTACTCAAATGT+GGG | - | chr8.1:15344454-15344473 | None:intergenic | 35.0% |
| !! | TTTGTTGATTCCTAGGTTGT+GGG | + | chr8.1:15347286-15347305 | MS.gene063536:intron | 35.0% |
| !!! | AAGCCAGTTTTGTTTCCAAT+AGG | + | chr8.1:15346186-15346205 | MS.gene063536:intron | 35.0% |
| !!! | ATAACATGTGCTGTTTTGTG+AGG | + | chr8.1:15345452-15345471 | MS.gene063536:CDS | 35.0% |
| AAGGTTATATGGTTGCCTCA+TGG | + | chr8.1:15344509-15344528 | MS.gene063536:CDS | 40.0% | |
| AAGTTATTCTCTTGCCAGAG+TGG | - | chr8.1:15344839-15344858 | None:intergenic | 40.0% | |
| ATGGTCAGAAAAACTCACAG+TGG | - | chr8.1:15343582-15343601 | None:intergenic | 40.0% | |
| ATTCAAAGAAGTTCCCAAGC+TGG | + | chr8.1:15345279-15345298 | MS.gene063536:intron | 40.0% | |
| CAAATTCTAATATGGGGCCA+TGG | - | chr8.1:15343409-15343428 | None:intergenic | 40.0% | |
| CACTAACTACTGCAGTTATG+TGG | + | chr8.1:15346899-15346918 | MS.gene063536:intron | 40.0% | |
| CCTGAAGACAAAAGAGTAGA+CGG | - | chr8.1:15344287-15344306 | None:intergenic | 40.0% | |
| CGAAACACATATCATTGGAC+GGG | + | chr8.1:15345917-15345936 | MS.gene063536:intron | 40.0% | |
| GACTGGACTTTCAATAGTTG+GGG | + | chr8.1:15343739-15343758 | MS.gene063536:CDS | 40.0% | |
| GATATTGGGCATGCAATCTT+TGG | + | chr8.1:15346349-15346368 | MS.gene063536:intron | 40.0% | |
| GATTCAACACAAGAACAGAC+AGG | - | chr8.1:15344817-15344836 | None:intergenic | 40.0% | |
| GATTCTTGGTTTCGTGACAT+TGG | + | chr8.1:15343554-15343573 | MS.gene063536:CDS | 40.0% | |
| GCAATGGTTCATTACTCCAT+TGG | - | chr8.1:15344720-15344739 | None:intergenic | 40.0% | |
| GCGAAACACATATCATTGGA+CGG | + | chr8.1:15345916-15345935 | MS.gene063536:intron | 40.0% | |
| GCTATCACCATGTACTTATG+AGG | + | chr8.1:15344875-15344894 | MS.gene063536:intron | 40.0% | |
| GCTATCATTGCTCCACAATT+TGG | + | chr8.1:15346701-15346720 | MS.gene063536:CDS | 40.0% | |
| GGAAGGTCTTAGACAGAATT+CGG | - | chr8.1:15346754-15346773 | None:intergenic | 40.0% | |
| GTGGTAATACATGTTCCTGA+AGG | - | chr8.1:15344401-15344420 | None:intergenic | 40.0% | |
| TAAACCTCTACTGGATGTTC+TGG | + | chr8.1:15346583-15346602 | MS.gene063536:intron | 40.0% | |
| TAGTTTGAGCCACAGATCTT+CGG | - | chr8.1:15346976-15346995 | None:intergenic | 40.0% | |
| TCAACGACTCTAACATGATC+CGG | - | chr8.1:15343521-15343540 | None:intergenic | 40.0% | |
| TGCAGGATAGTCTCATCATT+AGG | - | chr8.1:15346437-15346456 | None:intergenic | 40.0% | |
| TGGGAACTTCTTTGAATGTG+TGG | - | chr8.1:15345276-15345295 | None:intergenic | 40.0% | |
| TGGTCAGAAAAACTCACAGT+GGG | - | chr8.1:15343581-15343600 | None:intergenic | 40.0% | |
| TGTCGCGAAACACATATCAT+TGG | + | chr8.1:15345912-15345931 | MS.gene063536:intron | 40.0% | |
| TTCAAAGAAGTTCCCAAGCT+GGG | + | chr8.1:15345280-15345299 | MS.gene063536:intron | 40.0% | |
| TTCTTGTGTTGAATCCACTC+TGG | + | chr8.1:15344822-15344841 | MS.gene063536:intron | 40.0% | |
| ! | AGATTAGCTCCAACGATTCT+TGG | + | chr8.1:15343540-15343559 | MS.gene063536:CDS | 40.0% |
| ! | ATCATTTTCACGGTTGAGAC+AGG | - | chr8.1:15343322-15343341 | None:intergenic | 40.0% |
| ! | GATTTGGTTGGATGAGAACA+TGG | - | chr8.1:15347078-15347097 | None:intergenic | 40.0% |
| ! | GGTAGATTTTGGATGTTGAG+AGG | + | chr8.1:15344053-15344072 | MS.gene063536:intron | 40.0% |
| ! | TCTGGAACCTCATAAGTACA+TGG | - | chr8.1:15344885-15344904 | None:intergenic | 40.0% |
| ! | TGGTTGCCTCATGGATTATA+TGG | + | chr8.1:15344518-15344537 | MS.gene063536:CDS | 40.0% |
| !! | CGACAGCCTTGTTAAAAAGA+AGG | + | chr8.1:15343945-15343964 | MS.gene063536:CDS | 40.0% |
| !! | CTCAGTCATGTATAATGGAC+CGG | - | chr8.1:15345614-15345633 | None:intergenic | 40.0% |
| !! | GGTTCGGTTCATGATTTTAG+TGG | + | chr8.1:15343474-15343493 | MS.gene063536:intron | 40.0% |
| !! | GTTTGTTGATTCCTAGGTTG+TGG | + | chr8.1:15347285-15347304 | MS.gene063536:intron | 40.0% |
| !! | TCAGTCATGTATAATGGACC+GGG | - | chr8.1:15345613-15345632 | None:intergenic | 40.0% |
| !! | TTGAATCAGGAAGTTGGTAG+TGG | + | chr8.1:15345079-15345098 | MS.gene063536:intron | 40.0% |
| !!! | CATTTTCAAGCATTGGTCCA+TGG | + | chr8.1:15343389-15343408 | MS.gene063536:intron | 40.0% |
| AATCCTATGCTCCGCATCAT+CGG | - | chr8.1:15343710-15343729 | None:intergenic | 45.0% | |
| ACCTGACAAAACAATCTCCC+TGG | - | chr8.1:15347323-15347342 | None:intergenic | 45.0% | |
| ACCTTCAATTCCCACAACCT+AGG | - | chr8.1:15347299-15347318 | None:intergenic | 45.0% | |
| ACTCACTTCATGATGAGGGA+AGG | - | chr8.1:15346771-15346790 | None:intergenic | 45.0% | |
| AGCATCCATGTAGATGGAGA+AGG | + | chr8.1:15344115-15344134 | MS.gene063536:CDS | 45.0% | |
| ATAGGATTGCGGGAATTGAC+TGG | + | chr8.1:15343722-15343741 | MS.gene063536:CDS | 45.0% | |
| CAAGTTGCTCAACCAGTTCA+TGG | + | chr8.1:15344756-15344775 | MS.gene063536:intron | 45.0% | |
| CATTCTATGGTGCTTGAAGG+CGG | + | chr8.1:15344091-15344110 | MS.gene063536:CDS | 45.0% | |
| CTGAGCTGAACTAGCACAAA+CGG | - | chr8.1:15343161-15343180 | None:intergenic | 45.0% | |
| GAATGCTGGTAGTTAGCAGT+CGG | + | chr8.1:15346371-15346390 | MS.gene063536:intron | 45.0% | |
| GCAATCATAGGGTTACCACT+GGG | - | chr8.1:15346119-15346138 | None:intergenic | 45.0% | |
| GCCTTCAAGCACCATAGAAT+GGG | - | chr8.1:15344092-15344111 | None:intergenic | 45.0% | |
| GCTGAGAGCAAAACAATGAG+AGG | - | chr8.1:15346285-15346304 | None:intergenic | 45.0% | |
| GGCATATCTTGGAGTTAGGA+AGG | + | chr8.1:15344490-15344509 | MS.gene063536:CDS | 45.0% | |
| GTCACGAAACCAAGAATCGT+TGG | - | chr8.1:15343552-15343571 | None:intergenic | 45.0% | |
| GTCTCTGGTGTCTGGTTAAA+TGG | + | chr8.1:15346081-15346100 | MS.gene063536:intron | 45.0% | |
| GTGATCAAACTCCATGTTCC+CGG | + | chr8.1:15345592-15345611 | MS.gene063536:CDS | 45.0% | |
| GTTCAATAGACACTCTTCGG+TGG | - | chr8.1:15344420-15344439 | None:intergenic | 45.0% | |
| TACACCAGAACATCCAGTAG+AGG | - | chr8.1:15346590-15346609 | None:intergenic | 45.0% | |
| TCAACTTGTGTTTGCCAGAG+TGG | + | chr8.1:15343105-15343124 | MS.gene063536:CDS | 45.0% | |
| TCCCATTCTATGGTGCTTGA+AGG | + | chr8.1:15344088-15344107 | MS.gene063536:CDS | 45.0% | |
| TCCTAGGTTGTGGGAATTGA+AGG | + | chr8.1:15347295-15347314 | MS.gene063536:intron | 45.0% | |
| TCTCACCTTCTCCATCTACA+TGG | - | chr8.1:15344123-15344142 | None:intergenic | 45.0% | |
| TGCAATCATAGGGTTACCAC+TGG | - | chr8.1:15346120-15346139 | None:intergenic | 45.0% | |
| TGGACTTTCAATAGTTGGGG+AGG | + | chr8.1:15343742-15343761 | MS.gene063536:CDS | 45.0% | |
| TGTGGGAATTGAAGGTTCCA+GGG | + | chr8.1:15347303-15347322 | MS.gene063536:CDS | 45.0% | |
| TTAATGGAGTCTCTGGTGTC+TGG | + | chr8.1:15346073-15346092 | MS.gene063536:intron | 45.0% | |
| TTGGGACATTTGCGAGTTTG+TGG | - | chr8.1:15347139-15347158 | None:intergenic | 45.0% | |
| TTGTGGGAATTGAAGGTTCC+AGG | + | chr8.1:15347302-15347321 | MS.gene063536:CDS | 45.0% | |
| ! | CCGTCTACTCTTTTGTCTTC+AGG | + | chr8.1:15344284-15344303 | MS.gene063536:intron | 45.0% |
| ! | GTTCGCGGTTTTCTTTTCTG+TGG | + | chr8.1:15345816-15345835 | MS.gene063536:intron | 45.0% |
| !! | AGGGAGATTGTTTTGTCAGG+TGG | + | chr8.1:15347322-15347341 | MS.gene063536:CDS | 45.0% |
| !! | GATTTTAGTGGGAGAATGCC+CGG | + | chr8.1:15343486-15343505 | MS.gene063536:intron | 45.0% |
| !! | GCATGCAATCTTTGGAATGC+TGG | + | chr8.1:15346357-15346376 | MS.gene063536:intron | 45.0% |
| !! | TCCAGGGAGATTGTTTTGTC+AGG | + | chr8.1:15347319-15347338 | MS.gene063536:CDS | 45.0% |
| !! | TGTATAATGGACCGGGAACA+TGG | - | chr8.1:15345606-15345625 | None:intergenic | 45.0% |
| !!! | TTTAATTTTAATTATAAAGT+CGG | - | chr8.1:15343299-15343318 | None:intergenic | 5.0% |
| !!! | TTTATAGATTTTTTTTTTTT+GGG | + | chr8.1:15344650-15344669 | MS.gene063536:intron | 5.0% |
| !!! | TTTTATAGATTTTTTTTTTT+TGG | + | chr8.1:15344649-15344668 | MS.gene063536:intron | 5.0% |
| AATCCGATGATGCGGAGCAT+AGG | + | chr8.1:15343704-15343723 | MS.gene063536:CDS | 50.0% | |
| ACTTGTGTTTGCCAGAGTGG+CGG | + | chr8.1:15343108-15343127 | MS.gene063536:CDS | 50.0% | |
| AGTCTAGTACCAGGAAGCCT+TGG | - | chr8.1:15346644-15346663 | None:intergenic | 50.0% | |
| AGTTTGTGGCCGAAGATCTG+TGG | + | chr8.1:15346964-15346983 | MS.gene063536:intron | 50.0% | |
| ATGACTGAGAAAGAGGCTGC+TGG | + | chr8.1:15345625-15345644 | MS.gene063536:CDS | 50.0% | |
| CAAGACAGAAGAACCACACC+AGG | - | chr8.1:15345478-15345497 | None:intergenic | 50.0% | |
| CGCCTTCAAGCACCATAGAA+TGG | - | chr8.1:15344093-15344112 | None:intergenic | 50.0% | |
| CGGCCACAAACTTCATCACT+TGG | - | chr8.1:15346956-15346975 | None:intergenic | 50.0% | |
| CGTTTGTGCTAGTTCAGCTC+AGG | + | chr8.1:15343159-15343178 | MS.gene063536:CDS | 50.0% | |
| CTGGTGTGGTTCTTCTGTCT+TGG | + | chr8.1:15345476-15345495 | MS.gene063536:CDS | 50.0% | |
| GAAGCAGCAAGTCTAGTACC+AGG | - | chr8.1:15346653-15346672 | None:intergenic | 50.0% | |
| TCATTGGACGGGATACCACA+TGG | + | chr8.1:15345928-15345947 | MS.gene063536:intron | 50.0% | |
| TGACTGAGAAAGAGGCTGCT+GGG | + | chr8.1:15345626-15345645 | MS.gene063536:CDS | 50.0% | |
| TGATGCGGAGCATAGGATTG+CGG | + | chr8.1:15343711-15343730 | MS.gene063536:CDS | 50.0% | |
| TGTGCTAGTTCAGCTCAGGT+TGG | + | chr8.1:15343163-15343182 | MS.gene063536:intron | 50.0% | |
| ! | ATGATCCGGTAGCTGATTCC+GGG | - | chr8.1:15343507-15343526 | None:intergenic | 50.0% |
| ! | CATGATCCGGTAGCTGATTC+CGG | - | chr8.1:15343508-15343527 | None:intergenic | 50.0% |
| !!! | ATGTGCTGTTTTGTGAGGCC+TGG | + | chr8.1:15345457-15345476 | MS.gene063536:CDS | 50.0% |
| AGTACCAGGAAGCCTTGGCT+TGG | - | chr8.1:15346639-15346658 | None:intergenic | 55.0% | |
| GAATGCCCGGAATCAGCTAC+CGG | + | chr8.1:15343499-15343518 | MS.gene063536:CDS | 55.0% | |
| GACTGAGAAAGAGGCTGCTG+GGG | + | chr8.1:15345627-15345646 | MS.gene063536:CDS | 55.0% | |
| GATGCGGAGCATAGGATTGC+GGG | + | chr8.1:15343712-15343731 | MS.gene063536:CDS | 55.0% | |
| GGCACCGTCACGCCAATTAT+CGG | - | chr8.1:15343077-15343096 | None:intergenic | 55.0% | |
| TGGTAACCTCAAAGGCCCAG+TGG | + | chr8.1:15346101-15346120 | MS.gene063536:intron | 55.0% | |
| ! | AGAGGCTGCTGGGGTTTTTC+AGG | + | chr8.1:15345636-15345655 | MS.gene063536:CDS | 55.0% |
| ! | CTGTTTTGTGAGGCCTGGTG+TGG | + | chr8.1:15345462-15345481 | MS.gene063536:CDS | 55.0% |
| !! | AGGATGATGGAGCCAAGCCA+AGG | + | chr8.1:15346624-15346643 | MS.gene063536:intron | 55.0% |
| !! | GGCGGAAGCATCCATGTAGA+TGG | + | chr8.1:15344109-15344128 | MS.gene063536:CDS | 55.0% |
| AGAGATTGCAGCCGCCACTC+TGG | - | chr8.1:15343122-15343141 | None:intergenic | 60.0% | |
| GGGTTACCACTGGGCCTTTG+AGG | - | chr8.1:15346110-15346129 | None:intergenic | 60.0% | |
| ! | CGCGCCGATAATTGGCGTGA+CGG | + | chr8.1:15343070-15343089 | MS.gene063536:CDS | 60.0% |
| GGAGCCAAGCCAAGGCTTCC+TGG | + | chr8.1:15346632-15346651 | MS.gene063536:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 15343067 | 15347384 | 15343067 | ID=MS.gene063536 |
| chr8.1 | mRNA | 15343067 | 15347384 | 15343067 | ID=MS.gene063536.t1;Parent=MS.gene063536 |
| chr8.1 | exon | 15343067 | 15343180 | 15343067 | ID=MS.gene063536.t1.exon1;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15343067 | 15343180 | 15343067 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15343494 | 15343583 | 15343494 | ID=MS.gene063536.t1.exon2;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15343494 | 15343583 | 15343494 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15343679 | 15343763 | 15343679 | ID=MS.gene063536.t1.exon3;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15343679 | 15343763 | 15343679 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15343911 | 15343966 | 15343911 | ID=MS.gene063536.t1.exon4;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15343911 | 15343966 | 15343911 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15344058 | 15344136 | 15344058 | ID=MS.gene063536.t1.exon5;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15344058 | 15344136 | 15344058 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15344405 | 15344539 | 15344405 | ID=MS.gene063536.t1.exon6;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15344405 | 15344539 | 15344405 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15345425 | 15345657 | 15345425 | ID=MS.gene063536.t1.exon7;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15345425 | 15345657 | 15345425 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15346626 | 15346784 | 15346626 | ID=MS.gene063536.t1.exon8;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15346626 | 15346784 | 15346626 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| chr8.1 | exon | 15347301 | 15347384 | 15347301 | ID=MS.gene063536.t1.exon9;Parent=MS.gene063536.t1 |
| chr8.1 | CDS | 15347301 | 15347384 | 15347301 | ID=cds.MS.gene063536.t1;Parent=MS.gene063536.t1 |
| Gene Sequence |
| Protein sequence |
