Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063679.t1 | AES95221.2 | 76.5 | 388 | 49 | 3 | 1 | 358 | 105 | 480 | 2.80E-97 | 365.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063679.t1 | Q05753 | 47.5 | 223 | 101 | 4 | 1 | 220 | 100 | 309 | 2.7e-48 | 194.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063679.t1 | G7JYS4 | 76.5 | 388 | 49 | 3 | 1 | 358 | 105 | 480 | 2.1e-97 | 365.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050426 | MS.gene063679 | -0.827224 | 1.76E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene063679 | -0.801494 | 8.77E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene063679 | 0.825575 | 4.35E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene063679 | 0.826373 | 2.81E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene063679 | 0.830855 | 2.32E-55 | -1.69E-46 |
| MS.gene052469 | MS.gene063679 | 0.835245 | 1.88E-56 | -1.69E-46 |
| MS.gene053330 | MS.gene063679 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene063679 | 0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene059420 | MS.gene063679 | 0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene063679 | 0.807665 | 4.52E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063679.t1 | MTR_5g023090 | 84.085 | 377 | 40 | 3 | 1 | 358 | 105 | 480 | 0.0 | 627 |
| MS.gene063679.t1 | MTR_5g022050 | 72.423 | 359 | 68 | 4 | 1 | 358 | 100 | 428 | 1.24e-175 | 495 |
| MS.gene063679.t1 | MTR_5g022050 | 72.862 | 269 | 60 | 3 | 1 | 268 | 110 | 366 | 6.56e-130 | 377 |
| MS.gene063679.t1 | MTR_2g048680 | 44.865 | 185 | 100 | 2 | 147 | 330 | 124 | 307 | 2.04e-51 | 174 |
| MS.gene063679.t1 | MTR_2g048680 | 41.379 | 203 | 117 | 2 | 128 | 330 | 27 | 227 | 1.74e-49 | 166 |
| MS.gene063679.t1 | MTR_5g043640 | 31.655 | 139 | 94 | 1 | 169 | 307 | 89 | 226 | 4.89e-15 | 74.3 |
| MS.gene063679.t1 | MTR_5g043640 | 32.353 | 136 | 90 | 1 | 174 | 307 | 58 | 193 | 1.75e-14 | 72.8 |
| MS.gene063679.t1 | MTR_5g026800 | 30.657 | 137 | 95 | 0 | 174 | 310 | 15 | 151 | 3.04e-14 | 72.4 |
| MS.gene063679.t1 | MTR_5g077770 | 37.179 | 156 | 89 | 4 | 173 | 327 | 591 | 738 | 2.49e-12 | 68.9 |
| MS.gene063679.t1 | MTR_2g096760 | 30.675 | 163 | 95 | 4 | 169 | 314 | 45 | 206 | 6.86e-12 | 67.0 |
| MS.gene063679.t1 | MTR_6g027840 | 26.172 | 256 | 175 | 6 | 82 | 325 | 111 | 364 | 1.88e-11 | 65.9 |
| MS.gene063679.t1 | MTR_3g491870 | 34.234 | 111 | 69 | 2 | 204 | 310 | 233 | 343 | 3.06e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063679.t1 | AT5G66055 | 56.156 | 333 | 130 | 4 | 1 | 330 | 100 | 419 | 3.09e-124 | 365 |
| MS.gene063679.t1 | AT5G66055 | 52.381 | 273 | 114 | 4 | 1 | 270 | 100 | 359 | 5.57e-88 | 270 |
| MS.gene063679.t1 | AT5G40160 | 46.277 | 188 | 99 | 2 | 147 | 333 | 128 | 314 | 3.27e-50 | 171 |
| MS.gene063679.t1 | AT5G40160 | 46.154 | 156 | 82 | 2 | 147 | 301 | 128 | 282 | 3.60e-40 | 144 |
| MS.gene063679.t1 | AT5G53470 | 36.000 | 100 | 62 | 1 | 213 | 310 | 225 | 324 | 2.19e-13 | 70.9 |
| MS.gene063679.t1 | AT4G27780 | 40.506 | 79 | 47 | 0 | 232 | 310 | 261 | 339 | 1.23e-12 | 68.9 |
| MS.gene063679.t1 | AT2G14255 | 32.450 | 151 | 98 | 3 | 162 | 309 | 83 | 232 | 7.16e-12 | 67.0 |
| MS.gene063679.t1 | AT2G25600 | 33.803 | 142 | 91 | 2 | 174 | 315 | 581 | 719 | 1.15e-11 | 67.0 |
| MS.gene063679.t1 | AT5G02620 | 28.251 | 223 | 148 | 8 | 154 | 369 | 108 | 325 | 3.97e-11 | 64.7 |
| MS.gene063679.t1 | AT5G02620 | 28.251 | 223 | 148 | 8 | 154 | 369 | 108 | 325 | 3.97e-11 | 64.7 |
| MS.gene063679.t1 | AT5G02620 | 28.251 | 223 | 148 | 8 | 154 | 369 | 108 | 325 | 3.97e-11 | 64.7 |
| MS.gene063679.t1 | AT2G03430 | 30.216 | 139 | 96 | 1 | 169 | 307 | 82 | 219 | 4.64e-11 | 62.8 |
| MS.gene063679.t1 | AT2G31820 | 26.778 | 239 | 157 | 8 | 103 | 328 | 182 | 415 | 9.99e-11 | 63.9 |
Find 68 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTATTTGTAGGATAAA+TGG | 0.172018 | 5.3:+13460527 | MS.gene063679:intron |
| AATCCTAGGTGGGCTGTTTA+TGG | 0.193086 | 5.3:+13458741 | MS.gene063679:CDS |
| ATAATCTTGTTCCTGATAAA+TGG | 0.227663 | 5.3:+13458418 | MS.gene063679:CDS |
| GTTGGTTCCTTTGAGGGATA+TGG | 0.236009 | 5.3:+13458572 | MS.gene063679:CDS |
| TGAACTTGTTTCCATTTATC+AGG | 0.246834 | 5.3:-13458429 | None:intergenic |
| GCTCTTTACAAAGCAATAAT+TGG | 0.250325 | 5.3:+13460741 | MS.gene063679:CDS |
| GACTCTGCTGCTAAGAAAAT+TGG | 0.257867 | 5.3:+13458810 | MS.gene063679:CDS |
| GTGGAGCTTCTGCTGATTAA+AGG | 0.288035 | 5.3:+13461558 | MS.gene063679:CDS |
| GCTGCAACAAAGTATCTAAA+AGG | 0.328401 | 5.3:-13460588 | None:intergenic |
| AGCTTATAAAGAAACTAAAT+TGG | 0.344627 | 5.3:+13458611 | MS.gene063679:CDS |
| GCTATTCTTCACTTCCTTGT+TGG | 0.353333 | 5.3:-13462746 | None:intergenic |
| TCAATCTCTTGAGCTTTCTT+AGG | 0.357792 | 5.3:-13458516 | None:intergenic |
| ATTGGCTCAGCTGACGCCTT+TGG | 0.365909 | 5.3:+13458629 | MS.gene063679:CDS |
| CCGTCGGGCGCGTCTATATA+AGG | 0.372189 | 5.3:-13462685 | None:intergenic |
| CAATGTGGATATAAATCTTC+GGG | 0.377195 | 5.3:+13461388 | MS.gene063679:CDS |
| CTCTCGGGCGCGTCTATATA+AGG | 0.380106 | 5.3:-13462636 | None:intergenic |
| ATCCTAGGTGGGCTGTTTAT+GGG | 0.393025 | 5.3:+13458742 | MS.gene063679:CDS |
| GACGCCTTTGGTTCTTGATA+AGG | 0.399997 | 5.3:+13458641 | MS.gene063679:CDS |
| AGCAGAAGCTCCACTATATC+AGG | 0.401672 | 5.3:-13461549 | None:intergenic |
| CAGAGTTTCTCACGAGAAGA+TGG | 0.403613 | 5.3:-13460782 | None:intergenic |
| CTCACATTATCTTGCACAAA+CGG | 0.408366 | 5.3:-13460810 | None:intergenic |
| TTTATCAGGAACAAGATTAT+CGG | 0.417473 | 5.3:-13458415 | None:intergenic |
| AAGAAGGTTGGTTCCTTTGA+GGG | 0.419078 | 5.3:+13458566 | MS.gene063679:CDS |
| ACAATGTGGATATAAATCTT+CGG | 0.421567 | 5.3:+13461387 | MS.gene063679:CDS |
| TTGCTCTGTCTTAGGATGGC+TGG | 0.424376 | 5.3:+13461493 | MS.gene063679:intron |
| GAAAGGGTTGGAGGATGTTA+AGG | 0.424735 | 5.3:+13458764 | MS.gene063679:CDS |
| AAAGAAGGTTGGTTCCTTTG+AGG | 0.431464 | 5.3:+13458565 | MS.gene063679:CDS |
| TGATATTAATGCTATGGATA+AGG | 0.439944 | 5.3:+13460621 | MS.gene063679:CDS |
| TCTCACGAGAAGATGGGTTA+TGG | 0.444360 | 5.3:-13460775 | None:intergenic |
| AGGTGGGCTGTTTATGGGAA+AGG | 0.444581 | 5.3:+13458747 | MS.gene063679:CDS |
| ACAAGAGTGCTTTAATTGCT+CGG | 0.449055 | 5.3:-13461361 | None:intergenic |
| CAACAAATCCCTCTCTTCCC+AGG | 0.458338 | 5.3:-13460166 | None:intergenic |
| GGCTGTTTATGGGAAAGGGT+TGG | 0.464497 | 5.3:+13458752 | MS.gene063679:CDS |
| CAAGAGTGCTTTAATTGCTC+GGG | 0.466031 | 5.3:-13461360 | None:intergenic |
| ATAGACGCGCCCGACGGAAG+TGG | 0.466914 | 5.3:+13462691 | MS.gene063679:CDS |
| GGGTAGAGGCTAGGAATCCT+AGG | 0.467709 | 5.3:+13458727 | MS.gene063679:CDS |
| TGTTTATGGGAAAGGGTTGG+AGG | 0.474904 | 5.3:+13458755 | MS.gene063679:CDS |
| GACTCAGAGACCTGATATAG+TGG | 0.487183 | 5.3:+13461539 | MS.gene063679:CDS |
| GAAGTAGCAACTGTCAAGTC+TGG | 0.492247 | 5.3:-13460201 | None:intergenic |
| AACTTGATTAACTCGTCTCT+CGG | 0.494680 | 5.3:-13462652 | None:intergenic |
| GGTGGGCTGTTTATGGGAAA+GGG | 0.497865 | 5.3:+13458748 | MS.gene063679:CDS |
| GTGAAGAGAGGGTAGAGGCT+AGG | 0.499732 | 5.3:+13458718 | MS.gene063679:CDS |
| CTCGACCTTTGCCTTTACTC+TGG | 0.500612 | 5.3:+13462567 | MS.gene063679:CDS |
| ACTTGATTAACTCGTCTCTC+GGG | 0.510011 | 5.3:-13462651 | None:intergenic |
| TAGATGGGTTGAGTGAAGAG+AGG | 0.516517 | 5.3:+13458706 | MS.gene063679:CDS |
| AGATGGGTTGAGTGAAGAGA+GGG | 0.518172 | 5.3:+13458707 | MS.gene063679:CDS |
| AAGTTATGAAGCTGAAAAGA+AGG | 0.520767 | 5.3:+13458550 | MS.gene063679:CDS |
| TGTTGTTGATATTAATGCTA+TGG | 0.523920 | 5.3:+13460615 | MS.gene063679:CDS |
| GTTGAGTGAAGAGAGGGTAG+AGG | 0.529804 | 5.3:+13458713 | MS.gene063679:CDS |
| TATGAAGCTGAAAAGAAGGT+TGG | 0.530164 | 5.3:+13458554 | MS.gene063679:CDS |
| TTTGTTTACCTGGGAAGAGA+GGG | 0.546480 | 5.3:+13460158 | MS.gene063679:CDS |
| GTCTGAACAGCAAGATGTAA+TGG | 0.552014 | 5.3:-13461519 | None:intergenic |
| TGCTGATTAAAGGCGCTGAT+CGG | 0.556487 | 5.3:+13461568 | MS.gene063679:CDS |
| AGAGTTTCTCACGAGAAGAT+GGG | 0.560384 | 5.3:-13460781 | None:intergenic |
| TCTGCTGCTAAGAAAATTGG+AGG | 0.583455 | 5.3:+13458813 | MS.gene063679:CDS |
| GAGTAAAGGCAAAGGTCGAG+TGG | 0.584489 | 5.3:-13462564 | None:intergenic |
| TTCAAATCCATATCCCTCAA+AGG | 0.588549 | 5.3:-13458579 | None:intergenic |
| TAAACATAACAAAGAAAGAA+CGG | 0.601565 | 5.3:+13458493 | MS.gene063679:CDS |
| AGAGGCTAGGAATCCTAGGT+GGG | 0.610369 | 5.3:+13458731 | MS.gene063679:CDS |
| CTCGCAGCAAAAGTGTGCAA+AGG | 0.613261 | 5.3:-13460553 | None:intergenic |
| TAGAGGCTAGGAATCCTAGG+TGG | 0.621675 | 5.3:+13458730 | MS.gene063679:CDS |
| TTTGAAGATCTGGACCAACA+AGG | 0.648499 | 5.3:+13462732 | MS.gene063679:CDS |
| TTGTACAGCATAGTGCATCA+AGG | 0.649508 | 5.3:-13461327 | None:intergenic |
| TTCCCATAAACAGCCCACCT+AGG | 0.650174 | 5.3:-13458744 | None:intergenic |
| TTTGACCAGAGTAAAGGCAA+AGG | 0.667685 | 5.3:-13462572 | None:intergenic |
| GGAACCTTATCAAGAACCAA+AGG | 0.680338 | 5.3:-13458645 | None:intergenic |
| CCTTATATAGACGCGCCCGA+CGG | 0.680984 | 5.3:+13462685 | MS.gene063679:CDS |
| TACAGCATAGTGCATCAAGG+TGG | 0.722597 | 5.3:-13461324 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATCAATGTAAAAGAAA+TGG | - | chr5.3:13462503-13462522 | None:intergenic | 15.0% |
| !! | AACTATATGTTAATAGATTA+AGG | - | chr5.3:13461224-13461243 | None:intergenic | 15.0% |
| !! | AATAATTTACAAAATAGAAG+CGG | + | chr5.3:13461708-13461727 | MS.gene063679:intron | 15.0% |
| !! | ACTATATGTTAATAGATTAA+GGG | - | chr5.3:13461223-13461242 | None:intergenic | 15.0% |
| !! | ATTATATATTGAACTGTTAT+TGG | + | chr5.3:13460275-13460294 | MS.gene063679:intron | 15.0% |
| !! | GTTAGTTAAAACAAATTTAT+GGG | + | chr5.3:13459432-13459451 | MS.gene063679:intron | 15.0% |
| !! | TGAAATTGATAGATTAATAT+AGG | - | chr5.3:13461627-13461646 | None:intergenic | 15.0% |
| !! | TGTTAGTTAAAACAAATTTA+TGG | + | chr5.3:13459431-13459450 | MS.gene063679:intron | 15.0% |
| !!! | AAAACTTTCAATTGTTATTT+AGG | + | chr5.3:13462092-13462111 | MS.gene063679:intron | 15.0% |
| !!! | CTCTATATTTATGTTTTTAA+TGG | + | chr5.3:13460498-13460517 | MS.gene063679:intron | 15.0% |
| !!! | TATATATGGTTTTTAAATGT+TGG | + | chr5.3:13460088-13460107 | MS.gene063679:intron | 15.0% |
| !! | AAAAATGCTTATAAGTTTAC+CGG | + | chr5.3:13459456-13459475 | MS.gene063679:intron | 20.0% |
| !! | AACAAAATATTCATCAATCA+CGG | - | chr5.3:13462314-13462333 | None:intergenic | 20.0% |
| !! | AAGAAATATGAAAAAAGCAA+TGG | + | chr5.3:13459836-13459855 | MS.gene063679:intron | 20.0% |
| !! | AAGATAGTAGTATTAATTAG+GGG | - | chr5.3:13459711-13459730 | None:intergenic | 20.0% |
| !! | AATATGTTGAAAACAACTTA+TGG | + | chr5.3:13461105-13461124 | MS.gene063679:intron | 20.0% |
| !! | AATCACAATAGTTTAAATAG+AGG | - | chr5.3:13460692-13460711 | None:intergenic | 20.0% |
| !! | ACAAGATAGTAGTATTAATT+AGG | - | chr5.3:13459713-13459732 | None:intergenic | 20.0% |
| !! | AGAAATATGAAAAAAGCAAT+GGG | + | chr5.3:13459837-13459856 | MS.gene063679:intron | 20.0% |
| !! | AGCTTATAAAGAAACTAAAT+TGG | + | chr5.3:13458611-13458630 | MS.gene063679:CDS | 20.0% |
| !! | AGTTATCTGATTTAAATGAA+AGG | + | chr5.3:13461976-13461995 | MS.gene063679:intron | 20.0% |
| !! | ATAATTTACAAAATAGAAGC+GGG | + | chr5.3:13461709-13461728 | MS.gene063679:intron | 20.0% |
| !! | ATATAGAGATTATTAACCAA+AGG | - | chr5.3:13460486-13460505 | None:intergenic | 20.0% |
| !! | ATGTATCTAGTAATTTGAAA+AGG | - | chr5.3:13459665-13459684 | None:intergenic | 20.0% |
| !! | CAAGATAGTAGTATTAATTA+GGG | - | chr5.3:13459712-13459731 | None:intergenic | 20.0% |
| !! | GCTTCATATATTATTGTTTA+GGG | + | chr5.3:13459158-13459177 | MS.gene063679:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | - | chr5.3:13459629-13459648 | None:intergenic | 20.0% |
| !! | TAAACATAACAAAGAAAGAA+CGG | + | chr5.3:13458493-13458512 | MS.gene063679:CDS | 20.0% |
| !! | TCTATTGTATTAAAAACTCA+CGG | + | chr5.3:13459554-13459573 | MS.gene063679:intron | 20.0% |
| !! | TGCTTCATATATTATTGTTT+AGG | + | chr5.3:13459157-13459176 | MS.gene063679:intron | 20.0% |
| !! | TGTATCTAGTAATTTGAAAA+GGG | - | chr5.3:13459664-13459683 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | + | chr5.3:13459754-13459773 | MS.gene063679:intron | 20.0% |
| !!! | AAATAAAACTTTTGAAGATC+TGG | + | chr5.3:13462722-13462741 | MS.gene063679:CDS | 20.0% |
| !!! | AAATGGATCATTTTATTCAT+TGG | + | chr5.3:13460010-13460029 | MS.gene063679:intron | 20.0% |
| !!! | GACATTTTAAAAAATAAGTG+TGG | + | chr5.3:13459379-13459398 | MS.gene063679:intron | 20.0% |
| !!! | TGAATATAGATGCTTTTAAT+GGG | + | chr5.3:13461733-13461752 | MS.gene063679:intron | 20.0% |
| !!! | TGATTTGTTTTACTTTTTCA+AGG | + | chr5.3:13460707-13460726 | MS.gene063679:intron | 20.0% |
| !!! | TGCATTTGCTTTTAATTTAT+GGG | + | chr5.3:13459404-13459423 | MS.gene063679:intron | 20.0% |
| !!! | TTGCATTTGCTTTTAATTTA+TGG | + | chr5.3:13459403-13459422 | MS.gene063679:intron | 20.0% |
| !!! | TTTGTATTTACAATCTGTTT+TGG | + | chr5.3:13458839-13458858 | MS.gene063679:intron | 20.0% |
| ! | ACAATGTGGATATAAATCTT+CGG | + | chr5.3:13461387-13461406 | MS.gene063679:CDS | 25.0% |
| ! | ATAATCTTGTTCCTGATAAA+TGG | + | chr5.3:13458418-13458437 | MS.gene063679:CDS | 25.0% |
| ! | ATGAAAAAGTTGAGATATAG+AGG | + | chr5.3:13459509-13459528 | MS.gene063679:intron | 25.0% |
| ! | CTCATTATTTGTAGGATAAA+TGG | + | chr5.3:13460527-13460546 | MS.gene063679:intron | 25.0% |
| ! | GAAATTTGATTGCGATAAAA+TGG | + | chr5.3:13459993-13460012 | MS.gene063679:intron | 25.0% |
| ! | GCTAATTAGATTATTGTGTT+GGG | + | chr5.3:13459041-13459060 | MS.gene063679:intron | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | chr5.3:13459630-13459649 | None:intergenic | 25.0% |
| ! | GTAAGAAAATCAACAGATAA+AGG | - | chr5.3:13460877-13460896 | None:intergenic | 25.0% |
| ! | GTATCTAGTAATTTGAAAAG+GGG | - | chr5.3:13459663-13459682 | None:intergenic | 25.0% |
| ! | TCTCATTGTTTGCATATATA+TGG | + | chr5.3:13460074-13460093 | MS.gene063679:intron | 25.0% |
| ! | TGATATTAATGCTATGGATA+AGG | + | chr5.3:13460621-13460640 | MS.gene063679:CDS | 25.0% |
| ! | TGCTAATTAGATTATTGTGT+TGG | + | chr5.3:13459040-13459059 | MS.gene063679:intron | 25.0% |
| ! | TGTTGTTGATATTAATGCTA+TGG | + | chr5.3:13460615-13460634 | MS.gene063679:CDS | 25.0% |
| ! | TTATATGTAACCTCATGTAT+TGG | + | chr5.3:13461867-13461886 | MS.gene063679:intron | 25.0% |
| ! | TTTATCAGGAACAAGATTAT+CGG | - | chr5.3:13458418-13458437 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCTTCAACTGAT+AGG | - | chr5.3:13462080-13462099 | None:intergenic | 25.0% |
| !! | AATCAGATAACTAGTTCTTA+AGG | - | chr5.3:13461968-13461987 | None:intergenic | 25.0% |
| !! | ATCTTCATTTTATCCGATTT+TGG | + | chr5.3:13460050-13460069 | MS.gene063679:intron | 25.0% |
| !! | CTGAATATAGATGCTTTTAA+TGG | + | chr5.3:13461732-13461751 | MS.gene063679:intron | 25.0% |
| !! | GTTTTTAAATGTTGGCATTT+TGG | + | chr5.3:13460096-13460115 | MS.gene063679:intron | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | chr5.3:13459701-13459720 | None:intergenic | 25.0% |
| !! | TCTCTTTAGATAAGTGTTTT+TGG | + | chr5.3:13459889-13459908 | MS.gene063679:intron | 25.0% |
| !! | TGAATTTTGTTCTCAAACAT+CGG | - | chr5.3:13461472-13461491 | None:intergenic | 25.0% |
| !! | TGATCAATTTTTCCAATACT+TGG | + | chr5.3:13461419-13461438 | MS.gene063679:intron | 25.0% |
| !!! | AGTTGCATTTTTTTCAATGT+TGG | + | chr5.3:13460414-13460433 | MS.gene063679:intron | 25.0% |
| !!! | TAATTTTTTGATCCAAGCAT+AGG | - | chr5.3:13462180-13462199 | None:intergenic | 25.0% |
| !!! | TTGTTTTACTTTTTCAAGGA+TGG | + | chr5.3:13460711-13460730 | MS.gene063679:intron | 25.0% |
| AAAATGTCAATACATCACCA+AGG | - | chr5.3:13459367-13459386 | None:intergenic | 30.0% | |
| AAATTCATTTGCTCTGTCTT+AGG | + | chr5.3:13461485-13461504 | MS.gene063679:intron | 30.0% | |
| AAGAAGGAAAAAGAAGTAGA+TGG | + | chr5.3:13458690-13458709 | MS.gene063679:CDS | 30.0% | |
| AAGTTATGAAGCTGAAAAGA+AGG | + | chr5.3:13458550-13458569 | MS.gene063679:CDS | 30.0% | |
| ACACAGAAGATTATAATGTG+TGG | + | chr5.3:13460663-13460682 | MS.gene063679:intron | 30.0% | |
| AGAAGGAAAAAGAAGTAGAT+GGG | + | chr5.3:13458691-13458710 | MS.gene063679:CDS | 30.0% | |
| AGCGATACAGATAAATATAC+CGG | - | chr5.3:13459138-13459157 | None:intergenic | 30.0% | |
| CAAACAATGAGAACCAAAAT+CGG | - | chr5.3:13460066-13460085 | None:intergenic | 30.0% | |
| CAATGTGGATATAAATCTTC+GGG | + | chr5.3:13461388-13461407 | MS.gene063679:CDS | 30.0% | |
| CGTTGTTATCATTACATCTT+AGG | + | chr5.3:13460950-13460969 | MS.gene063679:intron | 30.0% | |
| CTAAGATTACTCAACATCAA+CGG | - | chr5.3:13460358-13460377 | None:intergenic | 30.0% | |
| GAGACTAGAAGTTATTACAT+AGG | - | chr5.3:13458905-13458924 | None:intergenic | 30.0% | |
| GCTCTTTACAAAGCAATAAT+TGG | + | chr5.3:13460741-13460760 | MS.gene063679:CDS | 30.0% | |
| TAAACAACAAAGCAAATGCA+TGG | - | chr5.3:13461283-13461302 | None:intergenic | 30.0% | |
| TACGTTTGGTATATATGTGT+CGG | + | chr5.3:13458987-13459006 | MS.gene063679:intron | 30.0% | |
| TGAAAAGGGGTTTACATTTA+GGG | - | chr5.3:13459650-13459669 | None:intergenic | 30.0% | |
| TGATCGGACATTAAAAAACA+AGG | + | chr5.3:13461584-13461603 | MS.gene063679:CDS | 30.0% | |
| TTACTTCAACATCAAAACGA+AGG | - | chr5.3:13460323-13460342 | None:intergenic | 30.0% | |
| TTATATCCTTAGTTAGCTGT+TGG | + | chr5.3:13461245-13461264 | MS.gene063679:intron | 30.0% | |
| TTCTCAGCAAAACAAAAACT+CGG | - | chr5.3:13458669-13458688 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | - | chr5.3:13459651-13459670 | None:intergenic | 30.0% | |
| TTTAATGACTCTGACAACTT+TGG | - | chr5.3:13462055-13462074 | None:intergenic | 30.0% | |
| ! | ACTGTTTTCATTAGCTATTC+TGG | + | chr5.3:13461071-13461090 | MS.gene063679:intron | 30.0% |
| ! | AGATAACTAGTTCTTAAGGA+CGG | - | chr5.3:13461964-13461983 | None:intergenic | 30.0% |
| ! | ATCTACCTCTTATTCTTTTG+TGG | + | chr5.3:13461445-13461464 | MS.gene063679:intron | 30.0% |
| ! | ATTTATCTCTTGTTTGTCTC+AGG | + | chr5.3:13462530-13462549 | MS.gene063679:intron | 30.0% |
| ! | CTGTTTTCATTAGCTATTCT+GGG | + | chr5.3:13461072-13461091 | MS.gene063679:intron | 30.0% |
| ! | TAATAGATTAAGGGCATGTT+TGG | - | chr5.3:13461214-13461233 | None:intergenic | 30.0% |
| ! | TGAACTTGTTTCCATTTATC+AGG | - | chr5.3:13458432-13458451 | None:intergenic | 30.0% |
| ! | TGGATCATTTTATTCATTGG+CGG | + | chr5.3:13460013-13460032 | MS.gene063679:intron | 30.0% |
| ! | TTCTGCTTGTTAGATAACTT+TGG | + | chr5.3:13459303-13459322 | MS.gene063679:intron | 30.0% |
| !! | TACTAGAGTATTGTTCAACT+CGG | + | chr5.3:13462364-13462383 | MS.gene063679:intron | 30.0% |
| !! | TTGTTTTGCTGAGAAAAAGA+AGG | + | chr5.3:13458674-13458693 | MS.gene063679:CDS | 30.0% |
| !! | TTTAACTTTTCAATAAGCGC+CGG | - | chr5.3:13459478-13459497 | None:intergenic | 30.0% |
| !!! | TCTTCCTTTTTTGTTTACCT+GGG | + | chr5.3:13460149-13460168 | MS.gene063679:CDS | 30.0% |
| !!! | TTAGATAAGTGTTTTTGGAG+AGG | + | chr5.3:13459894-13459913 | MS.gene063679:intron | 30.0% |
| AACTTGATTAACTCGTCTCT+CGG | - | chr5.3:13462655-13462674 | None:intergenic | 35.0% | |
| AAGCAAATGCATGGAATATC+AGG | - | chr5.3:13461274-13461293 | None:intergenic | 35.0% | |
| AGACTATTCAGAAGAGCTTA+TGG | - | chr5.3:13461150-13461169 | None:intergenic | 35.0% | |
| ATCCAAAATGGCTCTTAAGT+TGG | + | chr5.3:13459920-13459939 | MS.gene063679:intron | 35.0% | |
| CAAAAAAGGAAGACCTATTC+AGG | - | chr5.3:13460142-13460161 | None:intergenic | 35.0% | |
| CAAATGGGTGCTTAGATATA+GGG | - | chr5.3:13459614-13459633 | None:intergenic | 35.0% | |
| CATACACATGTAGTTACCTT+TGG | + | chr5.3:13459090-13459109 | MS.gene063679:intron | 35.0% | |
| CATCATCCATTAAGTACCAA+AGG | - | chr5.3:13459959-13459978 | None:intergenic | 35.0% | |
| CTATGTGTCAATGTCATATC+CGG | + | chr5.3:13459244-13459263 | MS.gene063679:intron | 35.0% | |
| CTCACATTATCTTGCACAAA+CGG | - | chr5.3:13460813-13460832 | None:intergenic | 35.0% | |
| GGCTAACACTCATTATTTGT+AGG | + | chr5.3:13460519-13460538 | MS.gene063679:intron | 35.0% | |
| GGTAAAATATCAGTTGTCAC+TGG | + | chr5.3:13461761-13461780 | MS.gene063679:intron | 35.0% | |
| GTAGTGAAAATCAACTTCCT+TGG | + | chr5.3:13459347-13459366 | MS.gene063679:intron | 35.0% | |
| GTTGTCTAGCAGATTAATAC+TGG | + | chr5.3:13462477-13462496 | MS.gene063679:intron | 35.0% | |
| TATGAAGCTGAAAAGAAGGT+TGG | + | chr5.3:13458554-13458573 | MS.gene063679:CDS | 35.0% | |
| TCAAATGGGTGCTTAGATAT+AGG | - | chr5.3:13459615-13459634 | None:intergenic | 35.0% | |
| TCAACAAAGAAGCAAGTGAT+TGG | - | chr5.3:13462133-13462152 | None:intergenic | 35.0% | |
| TCAATCTCTTGAGCTTTCTT+AGG | - | chr5.3:13458519-13458538 | None:intergenic | 35.0% | |
| TCACAACCTTTGGTACTTAA+TGG | + | chr5.3:13459950-13459969 | MS.gene063679:intron | 35.0% | |
| TCTTCCCAGGTAAACAAAAA+AGG | - | chr5.3:13460156-13460175 | None:intergenic | 35.0% | |
| TCTTTCATACTTGCCTGAAT+AGG | + | chr5.3:13460126-13460145 | MS.gene063679:intron | 35.0% | |
| TGAGTAATCTTAGTAGCTGT+TGG | + | chr5.3:13460365-13460384 | MS.gene063679:intron | 35.0% | |
| TTCAAATCCATATCCCTCAA+AGG | - | chr5.3:13458582-13458601 | None:intergenic | 35.0% | |
| TTGGAGAGGTTTATCCAAAA+TGG | + | chr5.3:13459908-13459927 | MS.gene063679:intron | 35.0% | |
| TTGTGTCTGACACAAATACT+TGG | - | chr5.3:13459201-13459220 | None:intergenic | 35.0% | |
| TTTGTTAATGTACGTTGTCG+AGG | + | chr5.3:13458869-13458888 | MS.gene063679:intron | 35.0% | |
| ! | AATCATGATAGAAGTGTAGG+AGG | + | chr5.3:13460437-13460456 | MS.gene063679:intron | 35.0% |
| ! | ATGCATTCAATCTGAAGTGT+TGG | + | chr5.3:13461910-13461929 | MS.gene063679:intron | 35.0% |
| ! | ATTCACTTGTTTGTTGCCTT+TGG | + | chr5.3:13460467-13460486 | MS.gene063679:intron | 35.0% |
| ! | CTTTGGTACTTAATGGATGA+TGG | + | chr5.3:13459957-13459976 | MS.gene063679:intron | 35.0% |
| ! | GATAACTAGTTCTTAAGGAC+GGG | - | chr5.3:13461963-13461982 | None:intergenic | 35.0% |
| ! | GCTGCAACAAAGTATCTAAA+AGG | - | chr5.3:13460591-13460610 | None:intergenic | 35.0% |
| ! | TGGAATCATGATAGAAGTGT+AGG | + | chr5.3:13460434-13460453 | MS.gene063679:intron | 35.0% |
| ! | TTTTTCTTATCCACTTCCGT+CGG | - | chr5.3:13462704-13462723 | None:intergenic | 35.0% |
| !! | ACAAGAGTGCTTTAATTGCT+CGG | - | chr5.3:13461364-13461383 | None:intergenic | 35.0% |
| !! | AGATGCTTTTAATGGGTCAT+TGG | + | chr5.3:13461740-13461759 | MS.gene063679:intron | 35.0% |
| !! | TGACATTTTGACCAGAGTAA+AGG | - | chr5.3:13462581-13462600 | None:intergenic | 35.0% |
| !! | TTGCTTTGTTGTTTATGTGC+TGG | + | chr5.3:13461288-13461307 | MS.gene063679:intron | 35.0% |
| !!! | AGCACTCTTGTTTTACAATG+TGG | + | chr5.3:13461373-13461392 | MS.gene063679:CDS | 35.0% |
| !!! | GTCTTCCTTTTTTGTTTACC+TGG | + | chr5.3:13460148-13460167 | MS.gene063679:CDS | 35.0% |
| ACAAACATTCATCATGACCC+TGG | + | chr5.3:13461670-13461689 | MS.gene063679:intron | 40.0% | |
| ACAACGATGAATTTCCAGTG+AGG | - | chr5.3:13460936-13460955 | None:intergenic | 40.0% | |
| ACTTGATTAACTCGTCTCTC+GGG | - | chr5.3:13462654-13462673 | None:intergenic | 40.0% | |
| AGAGTTTCTCACGAGAAGAT+GGG | - | chr5.3:13460784-13460803 | None:intergenic | 40.0% | |
| AGATTACTCAACATCAACGG+TGG | - | chr5.3:13460355-13460374 | None:intergenic | 40.0% | |
| AGCAACACAGATGCATATAC+CGG | - | chr5.3:13459266-13459285 | None:intergenic | 40.0% | |
| AGGATACCAACAGCTAACTA+AGG | - | chr5.3:13461254-13461273 | None:intergenic | 40.0% | |
| CAAACACACGTAGTTACGTT+TGG | + | chr5.3:13458973-13458992 | MS.gene063679:intron | 40.0% | |
| CAACATGACACCAATACATG+AGG | - | chr5.3:13461880-13461899 | None:intergenic | 40.0% | |
| CAACGATGAATTTCCAGTGA+GGG | - | chr5.3:13460935-13460954 | None:intergenic | 40.0% | |
| CACTGACATGTAGATACCAA+AGG | - | chr5.3:13459109-13459128 | None:intergenic | 40.0% | |
| CGAGATTCTCCCTTTAAACA+GGG | + | chr5.3:13462021-13462040 | MS.gene063679:intron | 40.0% | |
| CTACATGTCAGTGTCATATC+CGG | + | chr5.3:13459116-13459135 | MS.gene063679:intron | 40.0% | |
| GAAAGACGTCCCTGTTTAAA+GGG | - | chr5.3:13462033-13462052 | None:intergenic | 40.0% | |
| GACTCTGCTGCTAAGAAAAT+TGG | + | chr5.3:13458810-13458829 | MS.gene063679:CDS | 40.0% | |
| GAGGTAGATAAGCCAAGTAT+TGG | - | chr5.3:13461434-13461453 | None:intergenic | 40.0% | |
| GGAACCTTATCAAGAACCAA+AGG | - | chr5.3:13458648-13458667 | None:intergenic | 40.0% | |
| GTCTGAACAGCAAGATGTAA+TGG | - | chr5.3:13461522-13461541 | None:intergenic | 40.0% | |
| GTTGTTTATGTGCTGGAAAC+AGG | + | chr5.3:13461295-13461314 | MS.gene063679:intron | 40.0% | |
| TCAGTCATTGCTCATAGACA+TGG | - | chr5.3:13460237-13460256 | None:intergenic | 40.0% | |
| TCATTTGCTCTGTCTTAGGA+TGG | + | chr5.3:13461489-13461508 | MS.gene063679:intron | 40.0% | |
| TCGAGATTCTCCCTTTAAAC+AGG | + | chr5.3:13462020-13462039 | MS.gene063679:intron | 40.0% | |
| TCGGTCCACAAAAGAATAAG+AGG | - | chr5.3:13461453-13461472 | None:intergenic | 40.0% | |
| TCTGCTGCTAAGAAAATTGG+AGG | + | chr5.3:13458813-13458832 | MS.gene063679:CDS | 40.0% | |
| TGTCTGACACCAATATGTGT+CGG | - | chr5.3:13459070-13459089 | None:intergenic | 40.0% | |
| TTATGTGCTGGAAACAGGAT+GGG | + | chr5.3:13461300-13461319 | MS.gene063679:intron | 40.0% | |
| TTGTACAGCATAGTGCATCA+AGG | - | chr5.3:13461330-13461349 | None:intergenic | 40.0% | |
| TTTATGTGCTGGAAACAGGA+TGG | + | chr5.3:13461299-13461318 | MS.gene063679:intron | 40.0% | |
| TTTGAAGATCTGGACCAACA+AGG | + | chr5.3:13462732-13462751 | MS.gene063679:CDS | 40.0% | |
| TTTGACCAGAGTAAAGGCAA+AGG | - | chr5.3:13462575-13462594 | None:intergenic | 40.0% | |
| TTTGTTTACCTGGGAAGAGA+GGG | + | chr5.3:13460158-13460177 | MS.gene063679:CDS | 40.0% | |
| ! | AAAGAAGGTTGGTTCCTTTG+AGG | + | chr5.3:13458565-13458584 | MS.gene063679:CDS | 40.0% |
| ! | AAGAAGGTTGGTTCCTTTGA+GGG | + | chr5.3:13458566-13458585 | MS.gene063679:CDS | 40.0% |
| ! | ATCTCTTGTTTGTCTCAGGA+TGG | + | chr5.3:13462534-13462553 | MS.gene063679:intron | 40.0% |
| ! | ATTATCGATGTCAAAGTGCC+AGG | - | chr5.3:13461691-13461710 | None:intergenic | 40.0% |
| ! | CACCAACTTAAGAGCCATTT+TGG | - | chr5.3:13459925-13459944 | None:intergenic | 40.0% |
| ! | GATAGAAGTGTAGGAGGAAA+GGG | + | chr5.3:13460443-13460462 | MS.gene063679:intron | 40.0% |
| ! | TGATAGAAGTGTAGGAGGAA+AGG | + | chr5.3:13460442-13460461 | MS.gene063679:intron | 40.0% |
| ! | TTATCGATGTCAAAGTGCCA+GGG | - | chr5.3:13461690-13461709 | None:intergenic | 40.0% |
| ! | TTTTCTTATCCACTTCCGTC+GGG | - | chr5.3:13462703-13462722 | None:intergenic | 40.0% |
| !! | CAAGAGTGCTTTAATTGCTC+GGG | - | chr5.3:13461363-13461382 | None:intergenic | 40.0% |
| !! | CAAGCACATGTGGTTACTTT+TGG | + | chr5.3:13459218-13459237 | MS.gene063679:intron | 40.0% |
| !! | CTCATGTATTGGTGTCATGT+TGG | + | chr5.3:13461878-13461897 | MS.gene063679:intron | 40.0% |
| !! | TTTTGTTTACCTGGGAAGAG+AGG | + | chr5.3:13460157-13460176 | MS.gene063679:CDS | 40.0% |
| AGCAACACAGACACATGCAT+CGG | - | chr5.3:13459021-13459040 | None:intergenic | 45.0% | |
| AGCAATGGGTGCCTACATTA+AGG | + | chr5.3:13459851-13459870 | MS.gene063679:intron | 45.0% | |
| AGCAGAAGCTCCACTATATC+AGG | - | chr5.3:13461552-13461571 | None:intergenic | 45.0% | |
| ATACTTGGCAGGCACATGAA+CGG | - | chr5.3:13459186-13459205 | None:intergenic | 45.0% | |
| ATTCATTGGCGGTTGAGTTC+AGG | + | chr5.3:13460024-13460043 | MS.gene063679:intron | 45.0% | |
| CAGAGTTTCTCACGAGAAGA+TGG | - | chr5.3:13460785-13460804 | None:intergenic | 45.0% | |
| CTAGTCAGTAGTCCTATGCT+TGG | + | chr5.3:13462165-13462184 | MS.gene063679:intron | 45.0% | |
| GAAAGGGTTGGAGGATGTTA+AGG | + | chr5.3:13458764-13458783 | MS.gene063679:CDS | 45.0% | |
| GAAGTAGCAACTGTCAAGTC+TGG | - | chr5.3:13460204-13460223 | None:intergenic | 45.0% | |
| GACTCAGAGACCTGATATAG+TGG | + | chr5.3:13461539-13461558 | MS.gene063679:CDS | 45.0% | |
| GATGAATTTCCAGTGAGGGA+AGG | - | chr5.3:13460931-13460950 | None:intergenic | 45.0% | |
| GCAATGGGTGCCTACATTAA+GGG | + | chr5.3:13459852-13459871 | MS.gene063679:intron | 45.0% | |
| GGAAAGACGTCCCTGTTTAA+AGG | - | chr5.3:13462034-13462053 | None:intergenic | 45.0% | |
| GTCTGACACAAATACTTGGC+AGG | - | chr5.3:13459197-13459216 | None:intergenic | 45.0% | |
| GTTGGCTAATCGACGCATAA+CGG | - | chr5.3:13462235-13462254 | None:intergenic | 45.0% | |
| TACAGCATAGTGCATCAAGG+TGG | - | chr5.3:13461327-13461346 | None:intergenic | 45.0% | |
| TATGTGCTGGAAACAGGATG+GGG | + | chr5.3:13461301-13461320 | MS.gene063679:intron | 45.0% | |
| TGCTTAGATATAGGGACGGA+GGG | - | chr5.3:13459606-13459625 | None:intergenic | 45.0% | |
| TGGGTGCTTAGATATAGGGA+CGG | - | chr5.3:13459610-13459629 | None:intergenic | 45.0% | |
| TGTTTATGGGAAAGGGTTGG+AGG | + | chr5.3:13458755-13458774 | MS.gene063679:CDS | 45.0% | |
| ! | CTCTAGATTGAAAGCGTGTC+AGG | + | chr5.3:13458922-13458941 | MS.gene063679:intron | 45.0% |
| ! | GTGGAGCTTCTGCTGATTAA+AGG | + | chr5.3:13461558-13461577 | MS.gene063679:CDS | 45.0% |
| ! | GTTGGTTCCTTTGAGGGATA+TGG | + | chr5.3:13458572-13458591 | MS.gene063679:CDS | 45.0% |
| !! | AATCCTAGGTGGGCTGTTTA+TGG | + | chr5.3:13458741-13458760 | MS.gene063679:CDS | 45.0% |
| !! | AGATGGGTTGAGTGAAGAGA+GGG | + | chr5.3:13458707-13458726 | MS.gene063679:CDS | 45.0% |
| !! | ATCCTAGGTGGGCTGTTTAT+GGG | + | chr5.3:13458742-13458761 | MS.gene063679:CDS | 45.0% |
| !! | GACGCCTTTGGTTCTTGATA+AGG | + | chr5.3:13458641-13458660 | MS.gene063679:CDS | 45.0% |
| !! | TAGATGGGTTGAGTGAAGAG+AGG | + | chr5.3:13458706-13458725 | MS.gene063679:CDS | 45.0% |
| !! | TCTCACGAGAAGATGGGTTA+TGG | - | chr5.3:13460778-13460797 | None:intergenic | 45.0% |
| !! | TGCTGATTAAAGGCGCTGAT+CGG | + | chr5.3:13461568-13461587 | MS.gene063679:CDS | 45.0% |
| AGAGGCTAGGAATCCTAGGT+GGG | + | chr5.3:13458731-13458750 | MS.gene063679:CDS | 50.0% | |
| CAACAAATCCCTCTCTTCCC+AGG | - | chr5.3:13460169-13460188 | None:intergenic | 50.0% | |
| CTCACCTAGCAGAAGTGACA+AGG | + | chr5.3:13462262-13462281 | MS.gene063679:intron | 50.0% | |
| CTCGACCTTTGCCTTTACTC+TGG | + | chr5.3:13462567-13462586 | MS.gene063679:CDS | 50.0% | |
| GAGTAAAGGCAAAGGTCGAG+TGG | - | chr5.3:13462567-13462586 | None:intergenic | 50.0% | |
| GGCTGTTTATGGGAAAGGGT+TGG | + | chr5.3:13458752-13458771 | MS.gene063679:CDS | 50.0% | |
| GTCTAACACCATCACGTGTC+AGG | - | chr5.3:13458952-13458971 | None:intergenic | 50.0% | |
| GTGCTTAGATATAGGGACGG+AGG | - | chr5.3:13459607-13459626 | None:intergenic | 50.0% | |
| GTGTCAGACACAAGCACATG+TGG | + | chr5.3:13459208-13459227 | MS.gene063679:intron | 50.0% | |
| GTTGAGTGAAGAGAGGGTAG+AGG | + | chr5.3:13458713-13458732 | MS.gene063679:CDS | 50.0% | |
| GTTGGGTGTCCGACACATAT+TGG | + | chr5.3:13459058-13459077 | MS.gene063679:intron | 50.0% | |
| TAGAGGCTAGGAATCCTAGG+TGG | + | chr5.3:13458730-13458749 | MS.gene063679:CDS | 50.0% | |
| TGCCTACATTAAGGGACGGA+GGG | + | chr5.3:13459860-13459879 | MS.gene063679:intron | 50.0% | |
| TGCTAGGTGAGGACTGATGT+TGG | - | chr5.3:13462253-13462272 | None:intergenic | 50.0% | |
| TGGGTGCCTACATTAAGGGA+CGG | + | chr5.3:13459856-13459875 | MS.gene063679:intron | 50.0% | |
| TGTCAGTGTCAGTGCTTCGT+AGG | - | chr5.3:13461793-13461812 | None:intergenic | 50.0% | |
| TTCCCATAAACAGCCCACCT+AGG | - | chr5.3:13458747-13458766 | None:intergenic | 50.0% | |
| TTGCTCTGTCTTAGGATGGC+TGG | + | chr5.3:13461493-13461512 | MS.gene063679:intron | 50.0% | |
| ! | CAAGCCTTGTCACTTCTGCT+AGG | - | chr5.3:13462269-13462288 | None:intergenic | 50.0% |
| ! | CTCGCAGCAAAAGTGTGCAA+AGG | - | chr5.3:13460556-13460575 | None:intergenic | 50.0% |
| ! | CTTGTCACTTCTGCTAGGTG+AGG | - | chr5.3:13462264-13462283 | None:intergenic | 50.0% |
| ! | TTGCACACTTTTGCTGCGAG+TGG | + | chr5.3:13460556-13460575 | MS.gene063679:CDS | 50.0% |
| !! | AGGTGGGCTGTTTATGGGAA+AGG | + | chr5.3:13458747-13458766 | MS.gene063679:CDS | 50.0% |
| !! | GGTGGGCTGTTTATGGGAAA+GGG | + | chr5.3:13458748-13458767 | MS.gene063679:CDS | 50.0% |
| !! | TGGTGCTGCTTCACAACCTT+TGG | + | chr5.3:13459940-13459959 | MS.gene063679:intron | 50.0% |
| CCTTATATAGACGCGCCCGA+CGG | + | chr5.3:13462636-13462655 | MS.gene063679:CDS | 55.0% | |
| CTCCCTCCGTCCCTTAATGT+AGG | - | chr5.3:13459865-13459884 | None:intergenic | 55.0% | |
| CTCTCGGGCGCGTCTATATA+AGG | - | chr5.3:13462639-13462658 | None:intergenic | 55.0% | |
| GGGTAGAGGCTAGGAATCCT+AGG | + | chr5.3:13458727-13458746 | MS.gene063679:CDS | 55.0% | |
| GTGAAGAGAGGGTAGAGGCT+AGG | + | chr5.3:13458718-13458737 | MS.gene063679:CDS | 55.0% | |
| GTGCCTACATTAAGGGACGG+AGG | + | chr5.3:13459859-13459878 | MS.gene063679:intron | 55.0% | |
| TGTGCTCTTCCTTCCCTCAC+TGG | + | chr5.3:13460919-13460938 | MS.gene063679:intron | 55.0% | |
| ! | ATTGGCTCAGCTGACGCCTT+TGG | + | chr5.3:13458629-13458648 | MS.gene063679:CDS | 55.0% |
| CAGGTGCACCTGACACGTGA+TGG | + | chr5.3:13458941-13458960 | MS.gene063679:intron | 60.0% | |
| CCGTCGGGCGCGTCTATATA+AGG | - | chr5.3:13462688-13462707 | None:intergenic | 60.0% | |
| ATAGACGCGCCCGACGGAAG+TGG | + | chr5.3:13462691-13462710 | MS.gene063679:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 13458408 | 13462767 | 13458408 | ID=MS.gene063679 |
| chr5.3 | mRNA | 13458408 | 13462767 | 13458408 | ID=MS.gene063679.t1;Parent=MS.gene063679 |
| chr5.3 | exon | 13458408 | 13458834 | 13458408 | ID=MS.gene063679.t1.exon1;Parent=MS.gene063679.t1 |
| chr5.3 | CDS | 13458408 | 13458834 | 13458408 | ID=cds.MS.gene063679.t1;Parent=MS.gene063679.t1 |
| chr5.3 | exon | 13460148 | 13460224 | 13460148 | ID=MS.gene063679.t1.exon2;Parent=MS.gene063679.t1 |
| chr5.3 | CDS | 13460148 | 13460224 | 13460148 | ID=cds.MS.gene063679.t1;Parent=MS.gene063679.t1 |
| chr5.3 | exon | 13460541 | 13460642 | 13460541 | ID=MS.gene063679.t1.exon3;Parent=MS.gene063679.t1 |
| chr5.3 | CDS | 13460541 | 13460642 | 13460541 | ID=cds.MS.gene063679.t1;Parent=MS.gene063679.t1 |
| chr5.3 | exon | 13460729 | 13460827 | 13460729 | ID=MS.gene063679.t1.exon4;Parent=MS.gene063679.t1 |
| chr5.3 | CDS | 13460729 | 13460827 | 13460729 | ID=cds.MS.gene063679.t1;Parent=MS.gene063679.t1 |
| chr5.3 | exon | 13461317 | 13461415 | 13461317 | ID=MS.gene063679.t1.exon5;Parent=MS.gene063679.t1 |
| chr5.3 | CDS | 13461317 | 13461415 | 13461317 | ID=cds.MS.gene063679.t1;Parent=MS.gene063679.t1 |
| chr5.3 | exon | 13461507 | 13461605 | 13461507 | ID=MS.gene063679.t1.exon6;Parent=MS.gene063679.t1 |
| chr5.3 | CDS | 13461507 | 13461605 | 13461507 | ID=cds.MS.gene063679.t1;Parent=MS.gene063679.t1 |
| chr5.3 | exon | 13462552 | 13462767 | 13462552 | ID=MS.gene063679.t1.exon7;Parent=MS.gene063679.t1 |
| chr5.3 | CDS | 13462552 | 13462767 | 13462552 | ID=cds.MS.gene063679.t1;Parent=MS.gene063679.t1 |
| Gene Sequence |
| Protein sequence |
