Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06374.t1 | AES72906.2 | 98.4 | 625 | 10 | 0 | 1 | 625 | 1 | 625 | 0.00E+00 | 1248.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06374.t1 | Q8RWD6 | 49.3 | 600 | 255 | 8 | 6 | 600 | 18 | 573 | 8.4e-159 | 562.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06374.t1 | G7JC57 | 98.4 | 625 | 10 | 0 | 1 | 625 | 1 | 625 | 0.0e+00 | 1248.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049252 | MS.gene06374 | 0.802363 | 5.81E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49697 | MS.gene06374 | PPI |
| MS.gene49700 | MS.gene06374 | PPI |
| MS.gene013291 | MS.gene06374 | PPI |
| MS.gene70191 | MS.gene06374 | PPI |
| MS.gene70188 | MS.gene06374 | PPI |
| MS.gene06374 | MS.gene70191 | PPI |
| MS.gene06374 | MS.gene013291 | PPI |
| MS.gene06374 | MS.gene49697 | PPI |
| MS.gene030587 | MS.gene06374 | PPI |
| MS.gene06374 | MS.gene40916 | PPI |
| MS.gene030591 | MS.gene06374 | PPI |
| MS.gene049252 | MS.gene06374 | PPI |
| MS.gene40916 | MS.gene06374 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06374.t1 | MTR_3g096670 | 98.400 | 625 | 10 | 0 | 1 | 625 | 1 | 625 | 0.0 | 1271 |
| MS.gene06374.t1 | MTR_3g096670 | 98.211 | 615 | 11 | 0 | 1 | 615 | 1 | 615 | 0.0 | 1247 |
| MS.gene06374.t1 | MTR_8g094190 | 51.672 | 658 | 219 | 8 | 3 | 600 | 10 | 628 | 0.0 | 644 |
| MS.gene06374.t1 | MTR_0095s0110 | 73.889 | 180 | 47 | 0 | 421 | 600 | 1 | 180 | 1.94e-91 | 280 |
| MS.gene06374.t1 | MTR_8g094150 | 59.524 | 252 | 82 | 1 | 349 | 600 | 334 | 565 | 2.76e-86 | 280 |
| MS.gene06374.t1 | MTR_8g094150 | 44.099 | 322 | 97 | 10 | 52 | 362 | 6 | 255 | 5.93e-65 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06374.t1 | AT5G39450 | 48.915 | 599 | 259 | 7 | 6 | 600 | 18 | 573 | 0.0 | 560 |
| MS.gene06374.t1 | AT5G39460 | 45.050 | 606 | 267 | 13 | 6 | 600 | 11 | 561 | 7.82e-165 | 483 |
| MS.gene06374.t1 | AT5G39480 | 43.350 | 609 | 284 | 9 | 6 | 607 | 11 | 565 | 1.45e-164 | 483 |
| MS.gene06374.t1 | AT5G39490 | 42.975 | 605 | 285 | 12 | 6 | 604 | 10 | 560 | 4.57e-158 | 466 |
| MS.gene06374.t1 | AT5G39470 | 41.304 | 92 | 29 | 1 | 6 | 97 | 95 | 161 | 6.48e-15 | 73.6 |
Find 156 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTCTTATGAGGAGTTTC+AGG | 0.098515 | 3.1:+77079610 | MS.gene06374:CDS |
| ATCTTCCTAGAATATGTTTA+AGG | 0.167095 | 3.1:-77079277 | None:intergenic |
| TTCAACCATTGATTGGAATA+TGG | 0.169749 | 3.1:+77078475 | MS.gene06374:CDS |
| ACCAAGAATATGCCGGTTTA+TGG | 0.203112 | 3.1:+77079516 | MS.gene06374:CDS |
| AAGCTGACATGTCAGATTTA+AGG | 0.222042 | 3.1:-77080074 | None:intergenic |
| TCCACAGGAGCTTGGTCCTT+TGG | 0.267598 | 3.1:+77078575 | MS.gene06374:CDS |
| GTGTGTGCCTTCTAATATTT+TGG | 0.270047 | 3.1:-77079654 | None:intergenic |
| TTGTCTTCAGAAGGCTTTCC+TGG | 0.279525 | 3.1:-77079560 | None:intergenic |
| TGGAAGATGGTCCAATTCTA+TGG | 0.287138 | 3.1:+77078601 | MS.gene06374:CDS |
| AACTGGATGATGATCCTTCT+AGG | 0.292128 | 3.1:+77079171 | MS.gene06374:CDS |
| GGTTTATGGGGAGGTGCTTT+TGG | 0.293403 | 3.1:+77079530 | MS.gene06374:CDS |
| CCCATAAACCGGCATATTCT+TGG | 0.295459 | 3.1:-77079517 | None:intergenic |
| ACTGCTTGTAGTAAGCTTCT+TGG | 0.298147 | 3.1:-77079330 | None:intergenic |
| CCACAGGAGCTTGGTCCTTT+GGG | 0.298903 | 3.1:+77078576 | MS.gene06374:CDS |
| AAGGCATCCACAGATATTTC+TGG | 0.305195 | 3.1:+77079249 | MS.gene06374:CDS |
| CCAAGTTCGGCAAAAGATTT+CGG | 0.315526 | 3.1:+77078974 | MS.gene06374:CDS |
| ATAAACATTGCTGAACCATT+AGG | 0.319557 | 3.1:-77079689 | None:intergenic |
| CTGTGCCTGATTCTCTGTTC+GGG | 0.323598 | 3.1:+77079195 | MS.gene06374:CDS |
| AACCTACTGTCGTGCATATT+CGG | 0.327929 | 3.1:-77079455 | None:intergenic |
| CCAAGAATATGCCGGTTTAT+GGG | 0.334164 | 3.1:+77079517 | MS.gene06374:CDS |
| TTGAAAGTTCAACCATTGAT+TGG | 0.338629 | 3.1:+77078468 | MS.gene06374:CDS |
| GAGGGTATTGCGAGTGGTTA+CGG | 0.341328 | 3.1:+77079803 | MS.gene06374:CDS |
| TCAACCATTGATTGGAATAT+GGG | 0.344404 | 3.1:+77078476 | MS.gene06374:CDS |
| TTGTTTCTGTTGTTGGTTGT+AGG | 0.352128 | 3.1:+77078547 | MS.gene06374:CDS |
| AATAGCCTTAAACATATTCT+AGG | 0.353226 | 3.1:+77079272 | MS.gene06374:CDS |
| CTTTGTGCATCAGTCGGGTT+TGG | 0.353457 | 3.1:+77078812 | MS.gene06374:CDS |
| ATGGCGATTGGAAATAATAA+TGG | 0.368078 | 3.1:+77078885 | MS.gene06374:CDS |
| CTTTCTTCTCCTCTCTTATG+AGG | 0.368356 | 3.1:+77079601 | MS.gene06374:CDS |
| GGGAAACTTTCAGAAAGATT+TGG | 0.370752 | 3.1:+77079040 | MS.gene06374:CDS |
| ATGGTGTAATTGCATTCATT+TGG | 0.371435 | 3.1:+77079873 | MS.gene06374:CDS |
| TAGTAGTGAGATTGACTATA+AGG | 0.376971 | 3.1:+77079112 | MS.gene06374:CDS |
| AAGATTTCGGATACGGTGTT+AGG | 0.379377 | 3.1:+77078987 | MS.gene06374:CDS |
| AGAAAGAATAAAGCCTTTCC+AGG | 0.383068 | 3.1:-77079584 | None:intergenic |
| AAAACAGAAGCCCATAGAAT+TGG | 0.386768 | 3.1:-77078612 | None:intergenic |
| TGGTTCAAAACAGTTAAAAC+TGG | 0.388163 | 3.1:+77079154 | MS.gene06374:CDS |
| GGTCCTTTGGGTATGGAAGA+TGG | 0.389355 | 3.1:+77078588 | MS.gene06374:CDS |
| GCTGTGCCTGATTCTCTGTT+CGG | 0.390553 | 3.1:+77079194 | MS.gene06374:CDS |
| CACTATGTCTTGCACCCTAA+TGG | 0.390728 | 3.1:+77079674 | MS.gene06374:CDS |
| GACCATTATTTCCTAGATTG+AGG | 0.401734 | 3.1:+77079009 | MS.gene06374:CDS |
| GGCATATTCTTGGTCAGCAC+TGG | 0.407046 | 3.1:-77079507 | None:intergenic |
| GCATATATCTCTTGGTGAAA+AGG | 0.408204 | 3.1:-77078292 | None:intergenic |
| AGCGAGCCCGGCTTTGATCC+AGG | 0.411314 | 3.1:-77079836 | None:intergenic |
| TAAACATTGCTGAACCATTA+GGG | 0.416942 | 3.1:-77079688 | None:intergenic |
| CCTTGGTGAAGACAGAGAAT+TGG | 0.419711 | 3.1:-77080047 | None:intergenic |
| ATTATTGCAAATACATCATC+AGG | 0.419726 | 3.1:-77078261 | None:intergenic |
| AGGGTATTGCGAGTGGTTAC+GGG | 0.426909 | 3.1:+77079804 | MS.gene06374:CDS |
| ATTGCAACCAAAATATTAGA+AGG | 0.430279 | 3.1:+77079647 | MS.gene06374:CDS |
| TGTTTCTGTTGTTGGTTGTA+GGG | 0.432289 | 3.1:+77078548 | MS.gene06374:CDS |
| GAAAGATTTGGTGCTCTTGA+GGG | 0.435957 | 3.1:+77079052 | MS.gene06374:CDS |
| TCCTCCCCGAACAGAGAATC+AGG | 0.441964 | 3.1:-77079200 | None:intergenic |
| TCGTACTCGAATGTGTTTGC+CGG | 0.445539 | 3.1:+77080010 | MS.gene06374:CDS |
| TCCCTCAATCTAGGAAATAA+TGG | 0.448700 | 3.1:-77079011 | None:intergenic |
| CTCTCTTATGAGGAGTTTCA+GGG | 0.449126 | 3.1:+77079611 | MS.gene06374:CDS |
| GAATCAGGCACAGCCCTAGA+AGG | 0.449453 | 3.1:-77079185 | None:intergenic |
| CTCAGATTGCATATATCTCT+TGG | 0.449530 | 3.1:-77078300 | None:intergenic |
| ATCTCTTGGTGAAAAGGACT+TGG | 0.449769 | 3.1:-77078286 | None:intergenic |
| GGTATTGATTATATTTATCC+TGG | 0.450911 | 3.1:+77078693 | MS.gene06374:CDS |
| AAGCCTTCTGAAGACAAGCC+TGG | 0.453347 | 3.1:+77079566 | MS.gene06374:CDS |
| CTCATAGGGATCTTGTTGAA+TGG | 0.459503 | 3.1:+77078403 | MS.gene06374:CDS |
| TGATATATGCAGGCCACAAA+TGG | 0.460883 | 3.1:+77078866 | MS.gene06374:CDS |
| TTATTTCCAATCGCCATTTG+TGG | 0.461439 | 3.1:-77078879 | None:intergenic |
| CTTCGTCAGAACCCTTTCCT+TGG | 0.463451 | 3.1:+77079729 | MS.gene06374:CDS |
| TTTCTTCATGGAAGGGAAAA+GGG | 0.464888 | 3.1:+77078672 | MS.gene06374:CDS |
| ACCATTATTTCCTAGATTGA+GGG | 0.466215 | 3.1:+77079010 | MS.gene06374:CDS |
| TTTCACATTCGATGCGTTCA+AGG | 0.467423 | 3.1:-77079411 | None:intergenic |
| GGATCTTGTTGAATGGAGAA+AGG | 0.470827 | 3.1:+77078410 | MS.gene06374:CDS |
| CCCTCGTCATCCCTCAATCT+AGG | 0.472452 | 3.1:-77079020 | None:intergenic |
| GATTCTCTGTTCGGGGAGGA+TGG | 0.473616 | 3.1:+77079203 | MS.gene06374:CDS |
| AAAAGCTTTGTGCATCAGTC+GGG | 0.474642 | 3.1:+77078807 | MS.gene06374:CDS |
| AAAAGCACCTCCCCATAAAC+CGG | 0.474751 | 3.1:-77079528 | None:intergenic |
| TGGTTGTAGGGTCATTCCAC+AGG | 0.475796 | 3.1:+77078560 | MS.gene06374:CDS |
| AGGTTACTACTAGCCAAGTT+CGG | 0.477394 | 3.1:+77078961 | MS.gene06374:CDS |
| AGAAAGATTTGGTGCTCTTG+AGG | 0.481807 | 3.1:+77079051 | MS.gene06374:CDS |
| ATTCGGCCACGCTCTATATG+AGG | 0.483814 | 3.1:-77079438 | None:intergenic |
| GGAGCTTGGTCCTTTGGGTA+TGG | 0.485083 | 3.1:+77078581 | MS.gene06374:CDS |
| TTTCCAGGCTTGTCTTCAGA+AGG | 0.485572 | 3.1:-77079569 | None:intergenic |
| TGACTATAAGGCGAATTCTC+AGG | 0.485654 | 3.1:+77079124 | MS.gene06374:CDS |
| CATTCATTTGGAAGGAGACA+AGG | 0.489288 | 3.1:+77079885 | MS.gene06374:CDS |
| GCGAATTCTCAGGAGGTAGT+TGG | 0.497708 | 3.1:+77079134 | MS.gene06374:CDS |
| TAAACATGTTTGATATTCAC+CGG | 0.505675 | 3.1:-77079773 | None:intergenic |
| TGAAGACAGAGAATTGGAAG+AGG | 0.509737 | 3.1:-77080041 | None:intergenic |
| AGTTGTCGAGGAAGGTTAGT+AGG | 0.511568 | 3.1:+77078835 | MS.gene06374:CDS |
| AGGGTCATTCCACAGGAGCT+TGG | 0.512498 | 3.1:+77078567 | MS.gene06374:CDS |
| TTTGTGCATAGTTCCTCATA+GGG | 0.515256 | 3.1:+77078389 | MS.gene06374:CDS |
| CAAAAGCTTTGTGCATCAGT+CGG | 0.516161 | 3.1:+77078806 | MS.gene06374:CDS |
| ATACACCACGTTCCCTAGCT+CGG | 0.518490 | 3.1:-77078511 | None:intergenic |
| TGCGTCAGTGTTCCAAGGAA+AGG | 0.519685 | 3.1:-77079741 | None:intergenic |
| CTTAGTCGATTATACAAGCT+TGG | 0.519897 | 3.1:+77079089 | MS.gene06374:CDS |
| TACACCACGTTCCCTAGCTC+GGG | 0.520059 | 3.1:-77078510 | None:intergenic |
| TGAACCCATATTCCAATCAA+TGG | 0.520187 | 3.1:-77078480 | None:intergenic |
| CCAACAACAGAAACAAAACC+AGG | 0.521467 | 3.1:-77078540 | None:intergenic |
| CAGATACCCTGGATCAAAGC+CGG | 0.522628 | 3.1:+77079829 | MS.gene06374:CDS |
| ACTGGATGATGATCCTTCTA+GGG | 0.523784 | 3.1:+77079172 | MS.gene06374:CDS |
| ACACAATCTGTCAAGAGAAA+AGG | 0.523970 | 3.1:+77079230 | MS.gene06374:CDS |
| TTACTACAAGCAGTGAGAAA+AGG | 0.524086 | 3.1:+77079339 | MS.gene06374:CDS |
| GTTCATCAGAATCCCGAGCT+AGG | 0.525484 | 3.1:+77078498 | MS.gene06374:CDS |
| TGCAGGCCACAAATGGCGAT+TGG | 0.526229 | 3.1:+77078873 | MS.gene06374:CDS |
| GCGTCAGTGTTCCAAGGAAA+GGG | 0.526254 | 3.1:-77079740 | None:intergenic |
| TTGGCAATGGGAGGCAGGGA+AGG | 0.526438 | 3.1:-77079968 | None:intergenic |
| TCGGCAAAAGATTTCGGATA+CGG | 0.531860 | 3.1:+77078980 | MS.gene06374:CDS |
| GATCTTGTTGAATGGAGAAA+GGG | 0.534608 | 3.1:+77078411 | MS.gene06374:CDS |
| CCAATTCTCTGTCTTCACCA+AGG | 0.536737 | 3.1:+77080047 | MS.gene06374:CDS |
| CAAGAATATGCCGGTTTATG+GGG | 0.540204 | 3.1:+77079518 | MS.gene06374:CDS |
| AAGTCTTTGCAAGGTCAAAA+CGG | 0.541005 | 3.1:-77079909 | None:intergenic |
| TGTAATTGCATTCATTTGGA+AGG | 0.541118 | 3.1:+77079877 | MS.gene06374:CDS |
| GTCAGATTTAAGGCAAACCT+TGG | 0.551952 | 3.1:-77080064 | None:intergenic |
| GGAAGATGGTCCAATTCTAT+GGG | 0.557506 | 3.1:+77078602 | MS.gene06374:CDS |
| AACGTGGTGTATGTGATGCC+TGG | 0.559866 | 3.1:+77078522 | MS.gene06374:CDS |
| AGATACCCTGGATCAAAGCC+GGG | 0.560676 | 3.1:+77079830 | MS.gene06374:CDS |
| TTCATCAGAATCCCGAGCTA+GGG | 0.560905 | 3.1:+77078499 | MS.gene06374:CDS |
| TTCTGAAGACAAGCCTGGAA+AGG | 0.562004 | 3.1:+77079571 | MS.gene06374:CDS |
| TCCTAGATTGAGGGATGACG+AGG | 0.562895 | 3.1:+77079019 | MS.gene06374:CDS |
| ATATTTATCCTGGTTCAGCT+AGG | 0.564417 | 3.1:+77078703 | MS.gene06374:CDS |
| TTGCAAGTTAAGTCTTTGCA+AGG | 0.566086 | 3.1:-77079918 | None:intergenic |
| AAAGGGTGTGTGTTCTTACA+AGG | 0.566561 | 3.1:+77078428 | MS.gene06374:CDS |
| CCCAAAGGACCAAGCTCCTG+TGG | 0.567841 | 3.1:-77078576 | None:intergenic |
| GGTCGAATAGTGATATATGC+AGG | 0.569397 | 3.1:+77078856 | MS.gene06374:CDS |
| AAACATGTTTACACCGGTGA+GGG | 0.573686 | 3.1:+77079785 | MS.gene06374:CDS |
| GGGTTTGGAGTTGTCGAGGA+AGG | 0.575125 | 3.1:+77078827 | MS.gene06374:CDS |
| GCGATTGGAAATAATAATGG+AGG | 0.575282 | 3.1:+77078888 | MS.gene06374:CDS |
| CAAGAGCTTGAACTCTCTTG+TGG | 0.576041 | 3.1:+77078332 | MS.gene06374:CDS |
| ATTGGAAGAGGTAGGAAAGC+CGG | 0.576356 | 3.1:-77080029 | None:intergenic |
| GACAGAGAATTGGAAGAGGT+AGG | 0.577578 | 3.1:-77080037 | None:intergenic |
| TTGTAATATACTGTTGCTCG+AGG | 0.580020 | 3.1:+77078740 | MS.gene06374:CDS |
| ACCACTCGCAATACCCTCAC+CGG | 0.581038 | 3.1:-77079798 | None:intergenic |
| GCGAGCCCGGCTTTGATCCA+GGG | 0.582353 | 3.1:-77079835 | None:intergenic |
| GCATATTCTTGGTCAGCACT+GGG | 0.586024 | 3.1:-77079506 | None:intergenic |
| TGTGCCTGATTCTCTGTTCG+GGG | 0.600741 | 3.1:+77079196 | MS.gene06374:CDS |
| TCAATACACCTAGCTGAACC+AGG | 0.601363 | 3.1:-77078711 | None:intergenic |
| TCAGCACTGGGAACTCGCAA+TGG | 0.604696 | 3.1:-77079494 | None:intergenic |
| GAGTCTGCGTCAGTGTTCCA+AGG | 0.606735 | 3.1:-77079746 | None:intergenic |
| TCTTCAGAAGGCTTTCCTGG+AGG | 0.607041 | 3.1:-77079557 | None:intergenic |
| AAAATTGGCAATGGGAGGCA+GGG | 0.607188 | 3.1:-77079972 | None:intergenic |
| CACTGACGCAGACTCTATGC+CGG | 0.607244 | 3.1:+77079754 | MS.gene06374:CDS |
| TGATAGAAGAAAGTTGCTTG+AGG | 0.608396 | 3.1:+77078941 | MS.gene06374:CDS |
| GAATCCCGAGCTAGGGAACG+TGG | 0.613279 | 3.1:+77078506 | MS.gene06374:CDS |
| CATTCAACAAGATCCCTATG+AGG | 0.613850 | 3.1:-77078402 | None:intergenic |
| CAAGGAAAGGGTTCTGACGA+AGG | 0.614051 | 3.1:-77079728 | None:intergenic |
| ACCGGTGAGGGTATTGCGAG+TGG | 0.618049 | 3.1:+77079797 | MS.gene06374:CDS |
| AGTCGGGTTTGGAGTTGTCG+AGG | 0.619871 | 3.1:+77078823 | MS.gene06374:CDS |
| TCTCTGTTCGGGGAGGATGG+TGG | 0.622230 | 3.1:+77079206 | MS.gene06374:CDS |
| AGTGCTGACCAAGAATATGC+CGG | 0.626039 | 3.1:+77079509 | MS.gene06374:CDS |
| GGTTACGGGTTCAGATACCC+TGG | 0.628221 | 3.1:+77079818 | MS.gene06374:CDS |
| GGCTATTCCAGAAATATCTG+TGG | 0.633868 | 3.1:-77079256 | None:intergenic |
| CCTGAAACTCCTCATAAGAG+AGG | 0.640462 | 3.1:-77079610 | None:intergenic |
| GAATATGCCGGTTTATGGGG+AGG | 0.645792 | 3.1:+77079521 | MS.gene06374:CDS |
| AATATCAAACATGTTTACAC+CGG | 0.648293 | 3.1:+77079779 | MS.gene06374:CDS |
| CCTAGATTGAGGGATGACGA+GGG | 0.648877 | 3.1:+77079020 | MS.gene06374:CDS |
| ATTCATTTGGAAGGAGACAA+GGG | 0.650367 | 3.1:+77079886 | MS.gene06374:CDS |
| AACTATCCTCATATAGAGCG+TGG | 0.650949 | 3.1:+77079432 | MS.gene06374:CDS |
| GCCTGATTCTCTGTTCGGGG+AGG | 0.659025 | 3.1:+77079199 | MS.gene06374:CDS |
| CAAACATGTTTACACCGGTG+AGG | 0.663493 | 3.1:+77079784 | MS.gene06374:CDS |
| GGCCGAATATGCACGACAGT+AGG | 0.675381 | 3.1:+77079453 | MS.gene06374:CDS |
| CTATAAGGCGAATTCTCAGG+AGG | 0.681470 | 3.1:+77079127 | MS.gene06374:CDS |
| TTAAATCGAGTAACACAACA+AGG | 0.681965 | 3.1:+77079384 | MS.gene06374:CDS |
| GGACCATCTTCCATACCCAA+AGG | 0.682357 | 3.1:-77078591 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATATCAAACATGTTTACAC+CGG | + | chr3.1:77079779-77079798 | MS.gene06374:CDS | 25.0% |
| ! | ATCTTCCTAGAATATGTTTA+AGG | - | chr3.1:77079280-77079299 | None:intergenic | 25.0% |
| ! | ATTATTGCAAATACATCATC+AGG | - | chr3.1:77078264-77078283 | None:intergenic | 25.0% |
| ! | ATTGCAACCAAAATATTAGA+AGG | + | chr3.1:77079647-77079666 | MS.gene06374:CDS | 25.0% |
| ! | CCAGAACAAAATAAAAATGT+TGG | + | chr3.1:77078768-77078787 | MS.gene06374:CDS | 25.0% |
| ! | TAAACATGTTTGATATTCAC+CGG | - | chr3.1:77079776-77079795 | None:intergenic | 25.0% |
| !! | AATAGCCTTAAACATATTCT+AGG | + | chr3.1:77079272-77079291 | MS.gene06374:CDS | 25.0% |
| !!! | AGAAAAAGCTAATTTGCTAA+AGG | - | chr3.1:77078922-77078941 | None:intergenic | 25.0% |
| !!! | CCAACATTTTTATTTTGTTC+TGG | - | chr3.1:77078771-77078790 | None:intergenic | 25.0% |
| !!! | GGTATTGATTATATTTATCC+TGG | + | chr3.1:77078693-77078712 | MS.gene06374:CDS | 25.0% |
| ACCATTATTTCCTAGATTGA+GGG | + | chr3.1:77079010-77079029 | MS.gene06374:CDS | 30.0% | |
| AGATACGAAAAATTGGCAAT+GGG | - | chr3.1:77079983-77080002 | None:intergenic | 30.0% | |
| ATAAACATTGCTGAACCATT+AGG | - | chr3.1:77079692-77079711 | None:intergenic | 30.0% | |
| ATGGCGATTGGAAATAATAA+TGG | + | chr3.1:77078885-77078904 | MS.gene06374:CDS | 30.0% | |
| ATGGTGTAATTGCATTCATT+TGG | + | chr3.1:77079873-77079892 | MS.gene06374:CDS | 30.0% | |
| CTTTGTCAGATACGAAAAAT+TGG | - | chr3.1:77079990-77080009 | None:intergenic | 30.0% | |
| TAAACATTGCTGAACCATTA+GGG | - | chr3.1:77079691-77079710 | None:intergenic | 30.0% | |
| TAGTAGTGAGATTGACTATA+AGG | + | chr3.1:77079112-77079131 | MS.gene06374:CDS | 30.0% | |
| TGGTTCAAAACAGTTAAAAC+TGG | + | chr3.1:77079154-77079173 | MS.gene06374:CDS | 30.0% | |
| TGTAATTGCATTCATTTGGA+AGG | + | chr3.1:77079877-77079896 | MS.gene06374:CDS | 30.0% | |
| TTAAATCGAGTAACACAACA+AGG | + | chr3.1:77079384-77079403 | MS.gene06374:CDS | 30.0% | |
| TTGAAAGTTCAACCATTGAT+TGG | + | chr3.1:77078468-77078487 | MS.gene06374:CDS | 30.0% | |
| ! | TCAACCATTGATTGGAATAT+GGG | + | chr3.1:77078476-77078495 | MS.gene06374:CDS | 30.0% |
| ! | TTCAACCATTGATTGGAATA+TGG | + | chr3.1:77078475-77078494 | MS.gene06374:CDS | 30.0% |
| !! | TTGCAAGAACTTTTGAAGAA+GGG | + | chr3.1:77079935-77079954 | MS.gene06374:CDS | 30.0% |
| !!! | CATGTTTTTTCTTCATGGAA+GGG | + | chr3.1:77078665-77078684 | MS.gene06374:CDS | 30.0% |
| !!! | GAAGTTATTGCTGATTTTGA+TGG | + | chr3.1:77078636-77078655 | MS.gene06374:CDS | 30.0% |
| !!! | TCGCTCTTTGTTTTTCATAA+TGG | + | chr3.1:77079854-77079873 | MS.gene06374:CDS | 30.0% |
| AAAACAGAAGCCCATAGAAT+TGG | - | chr3.1:77078615-77078634 | None:intergenic | 35.0% | |
| AAGCTGACATGTCAGATTTA+AGG | - | chr3.1:77080077-77080096 | None:intergenic | 35.0% | |
| AAGTCTTTGCAAGGTCAAAA+CGG | - | chr3.1:77079912-77079931 | None:intergenic | 35.0% | |
| ACACAATCTGTCAAGAGAAA+AGG | + | chr3.1:77079230-77079249 | MS.gene06374:CDS | 35.0% | |
| AGAAAGAATAAAGCCTTTCC+AGG | - | chr3.1:77079587-77079606 | None:intergenic | 35.0% | |
| ATATTTATCCTGGTTCAGCT+AGG | + | chr3.1:77078703-77078722 | MS.gene06374:CDS | 35.0% | |
| ATTCATTTGGAAGGAGACAA+GGG | + | chr3.1:77079886-77079905 | MS.gene06374:CDS | 35.0% | |
| CAGATACGAAAAATTGGCAA+TGG | - | chr3.1:77079984-77080003 | None:intergenic | 35.0% | |
| CCTTCCATGAAGAAAAAACA+TGG | - | chr3.1:77078667-77078686 | None:intergenic | 35.0% | |
| CTCAGATTGCATATATCTCT+TGG | - | chr3.1:77078303-77078322 | None:intergenic | 35.0% | |
| CTTAGTCGATTATACAAGCT+TGG | + | chr3.1:77079089-77079108 | MS.gene06374:CDS | 35.0% | |
| GACCATTATTTCCTAGATTG+AGG | + | chr3.1:77079009-77079028 | MS.gene06374:CDS | 35.0% | |
| GATCTTGTTGAATGGAGAAA+GGG | + | chr3.1:77078411-77078430 | MS.gene06374:CDS | 35.0% | |
| GCATATATCTCTTGGTGAAA+AGG | - | chr3.1:77078295-77078314 | None:intergenic | 35.0% | |
| GCGATTGGAAATAATAATGG+AGG | + | chr3.1:77078888-77078907 | MS.gene06374:CDS | 35.0% | |
| GGGAAACTTTCAGAAAGATT+TGG | + | chr3.1:77079040-77079059 | MS.gene06374:CDS | 35.0% | |
| TCCCTCAATCTAGGAAATAA+TGG | - | chr3.1:77079014-77079033 | None:intergenic | 35.0% | |
| TGAACCCATATTCCAATCAA+TGG | - | chr3.1:77078483-77078502 | None:intergenic | 35.0% | |
| TGATAGAAGAAAGTTGCTTG+AGG | + | chr3.1:77078941-77078960 | MS.gene06374:CDS | 35.0% | |
| TTACTACAAGCAGTGAGAAA+AGG | + | chr3.1:77079339-77079358 | MS.gene06374:CDS | 35.0% | |
| TTATTTCCAATCGCCATTTG+TGG | - | chr3.1:77078882-77078901 | None:intergenic | 35.0% | |
| TTGCAAGTTAAGTCTTTGCA+AGG | - | chr3.1:77079921-77079940 | None:intergenic | 35.0% | |
| TTGTAATATACTGTTGCTCG+AGG | + | chr3.1:77078740-77078759 | MS.gene06374:CDS | 35.0% | |
| TTGTGGCATCTGAAAAAATC+TGG | + | chr3.1:77078349-77078368 | MS.gene06374:CDS | 35.0% | |
| TTTCTTCATGGAAGGGAAAA+GGG | + | chr3.1:77078672-77078691 | MS.gene06374:CDS | 35.0% | |
| TTTGTGCATAGTTCCTCATA+GGG | + | chr3.1:77078389-77078408 | MS.gene06374:CDS | 35.0% | |
| ! | GTGTGTGCCTTCTAATATTT+TGG | - | chr3.1:77079657-77079676 | None:intergenic | 35.0% |
| ! | TGTTTCTGTTGTTGGTTGTA+GGG | + | chr3.1:77078548-77078567 | MS.gene06374:CDS | 35.0% |
| ! | TTTTCTTCATGGAAGGGAAA+AGG | + | chr3.1:77078671-77078690 | MS.gene06374:CDS | 35.0% |
| ! | TTTTGTGCATAGTTCCTCAT+AGG | + | chr3.1:77078388-77078407 | MS.gene06374:CDS | 35.0% |
| !! | CTTGCAAGAACTTTTGAAGA+AGG | + | chr3.1:77079934-77079953 | MS.gene06374:CDS | 35.0% |
| !! | TTGTTTCTGTTGTTGGTTGT+AGG | + | chr3.1:77078547-77078566 | MS.gene06374:CDS | 35.0% |
| !!! | CCATGTTTTTTCTTCATGGA+AGG | + | chr3.1:77078664-77078683 | MS.gene06374:CDS | 35.0% |
| !!! | TCTGCCATGTTTTTTCTTCA+TGG | + | chr3.1:77078660-77078679 | MS.gene06374:CDS | 35.0% |
| AAACATGTTTACACCGGTGA+GGG | + | chr3.1:77079785-77079804 | MS.gene06374:CDS | 40.0% | |
| AACCTACTGTCGTGCATATT+CGG | - | chr3.1:77079458-77079477 | None:intergenic | 40.0% | |
| AACTATCCTCATATAGAGCG+TGG | + | chr3.1:77079432-77079451 | MS.gene06374:CDS | 40.0% | |
| AACTGGATGATGATCCTTCT+AGG | + | chr3.1:77079171-77079190 | MS.gene06374:CDS | 40.0% | |
| AAGATTTCGGATACGGTGTT+AGG | + | chr3.1:77078987-77079006 | MS.gene06374:CDS | 40.0% | |
| ACTGCTTGTAGTAAGCTTCT+TGG | - | chr3.1:77079333-77079352 | None:intergenic | 40.0% | |
| ACTGGATGATGATCCTTCTA+GGG | + | chr3.1:77079172-77079191 | MS.gene06374:CDS | 40.0% | |
| AGGTTACTACTAGCCAAGTT+CGG | + | chr3.1:77078961-77078980 | MS.gene06374:CDS | 40.0% | |
| ATCTCTTGGTGAAAAGGACT+TGG | - | chr3.1:77078289-77078308 | None:intergenic | 40.0% | |
| CATTCAACAAGATCCCTATG+AGG | - | chr3.1:77078405-77078424 | None:intergenic | 40.0% | |
| CATTCATTTGGAAGGAGACA+AGG | + | chr3.1:77079885-77079904 | MS.gene06374:CDS | 40.0% | |
| CCAACAACAGAAACAAAACC+AGG | - | chr3.1:77078543-77078562 | None:intergenic | 40.0% | |
| CCAAGTTCGGCAAAAGATTT+CGG | + | chr3.1:77078974-77078993 | MS.gene06374:CDS | 40.0% | |
| CTCATAGGGATCTTGTTGAA+TGG | + | chr3.1:77078403-77078422 | MS.gene06374:CDS | 40.0% | |
| CTCTCTTATGAGGAGTTTCA+GGG | + | chr3.1:77079611-77079630 | MS.gene06374:CDS | 40.0% | |
| CTTTCTTCTCCTCTCTTATG+AGG | + | chr3.1:77079601-77079620 | MS.gene06374:CDS | 40.0% | |
| GGAAGATGGTCCAATTCTAT+GGG | + | chr3.1:77078602-77078621 | MS.gene06374:CDS | 40.0% | |
| GGATCTTGTTGAATGGAGAA+AGG | + | chr3.1:77078410-77078429 | MS.gene06374:CDS | 40.0% | |
| GGCTATTCCAGAAATATCTG+TGG | - | chr3.1:77079259-77079278 | None:intergenic | 40.0% | |
| GGTCGAATAGTGATATATGC+AGG | + | chr3.1:77078856-77078875 | MS.gene06374:CDS | 40.0% | |
| TACGAAAAATTGGCAATGGG+AGG | - | chr3.1:77079980-77079999 | None:intergenic | 40.0% | |
| TCGGCAAAAGATTTCGGATA+CGG | + | chr3.1:77078980-77078999 | MS.gene06374:CDS | 40.0% | |
| TGAAGACAGAGAATTGGAAG+AGG | - | chr3.1:77080044-77080063 | None:intergenic | 40.0% | |
| TGACTATAAGGCGAATTCTC+AGG | + | chr3.1:77079124-77079143 | MS.gene06374:CDS | 40.0% | |
| TGATATATGCAGGCCACAAA+TGG | + | chr3.1:77078866-77078885 | MS.gene06374:CDS | 40.0% | |
| TGGAAGATGGTCCAATTCTA+TGG | + | chr3.1:77078601-77078620 | MS.gene06374:CDS | 40.0% | |
| TTTCACATTCGATGCGTTCA+AGG | - | chr3.1:77079414-77079433 | None:intergenic | 40.0% | |
| ! | AAAAGCTTTGTGCATCAGTC+GGG | + | chr3.1:77078807-77078826 | MS.gene06374:CDS | 40.0% |
| ! | AAAGGGTGTGTGTTCTTACA+AGG | + | chr3.1:77078428-77078447 | MS.gene06374:CDS | 40.0% |
| ! | AAGGCATCCACAGATATTTC+TGG | + | chr3.1:77079249-77079268 | MS.gene06374:CDS | 40.0% |
| ! | CAAAAGCTTTGTGCATCAGT+CGG | + | chr3.1:77078806-77078825 | MS.gene06374:CDS | 40.0% |
| ! | GTCAGATTTAAGGCAAACCT+TGG | - | chr3.1:77080067-77080086 | None:intergenic | 40.0% |
| !! | ACCAAGAATATGCCGGTTTA+TGG | + | chr3.1:77079516-77079535 | MS.gene06374:CDS | 40.0% |
| !! | AGAAAGATTTGGTGCTCTTG+AGG | + | chr3.1:77079051-77079070 | MS.gene06374:CDS | 40.0% |
| !! | CAAGAATATGCCGGTTTATG+GGG | + | chr3.1:77079518-77079537 | MS.gene06374:CDS | 40.0% |
| !! | CCAAGAATATGCCGGTTTAT+GGG | + | chr3.1:77079517-77079536 | MS.gene06374:CDS | 40.0% |
| !! | GAAAGATTTGGTGCTCTTGA+GGG | + | chr3.1:77079052-77079071 | MS.gene06374:CDS | 40.0% |
| !!! | CCTGGTTTTGTTTCTGTTGT+TGG | + | chr3.1:77078540-77078559 | MS.gene06374:CDS | 40.0% |
| AAAAATTGGCAATGGGAGGC+AGG | - | chr3.1:77079976-77079995 | None:intergenic | 45.0% | |
| AAAATTGGCAATGGGAGGCA+GGG | - | chr3.1:77079975-77079994 | None:intergenic | 45.0% | |
| AGTTGTCGAGGAAGGTTAGT+AGG | + | chr3.1:77078835-77078854 | MS.gene06374:CDS | 45.0% | |
| ATTGGAAGAGGTAGGAAAGC+CGG | - | chr3.1:77080032-77080051 | None:intergenic | 45.0% | |
| CAAACATGTTTACACCGGTG+AGG | + | chr3.1:77079784-77079803 | MS.gene06374:CDS | 45.0% | |
| CAAGAGCTTGAACTCTCTTG+TGG | + | chr3.1:77078332-77078351 | MS.gene06374:CDS | 45.0% | |
| CACTATGTCTTGCACCCTAA+TGG | + | chr3.1:77079674-77079693 | MS.gene06374:CDS | 45.0% | |
| CCAATTCTCTGTCTTCACCA+AGG | + | chr3.1:77080047-77080066 | MS.gene06374:CDS | 45.0% | |
| CCCATAAACCGGCATATTCT+TGG | - | chr3.1:77079520-77079539 | None:intergenic | 45.0% | |
| CCTCTCTTATGAGGAGTTTC+AGG | + | chr3.1:77079610-77079629 | MS.gene06374:CDS | 45.0% | |
| CCTGAAACTCCTCATAAGAG+AGG | - | chr3.1:77079613-77079632 | None:intergenic | 45.0% | |
| CCTTGGTGAAGACAGAGAAT+TGG | - | chr3.1:77080050-77080069 | None:intergenic | 45.0% | |
| CTATAAGGCGAATTCTCAGG+AGG | + | chr3.1:77079127-77079146 | MS.gene06374:CDS | 45.0% | |
| GACAGAGAATTGGAAGAGGT+AGG | - | chr3.1:77080040-77080059 | None:intergenic | 45.0% | |
| GCATATTCTTGGTCAGCACT+GGG | - | chr3.1:77079509-77079528 | None:intergenic | 45.0% | |
| TCAATACACCTAGCTGAACC+AGG | - | chr3.1:77078714-77078733 | None:intergenic | 45.0% | |
| TCGTACTCGAATGTGTTTGC+CGG | + | chr3.1:77080010-77080029 | MS.gene06374:CDS | 45.0% | |
| TGAAAAACAAAGAGCGAGCC+CGG | - | chr3.1:77079851-77079870 | None:intergenic | 45.0% | |
| TTCATCAGAATCCCGAGCTA+GGG | + | chr3.1:77078499-77078518 | MS.gene06374:CDS | 45.0% | |
| TTGTCTTCAGAAGGCTTTCC+TGG | - | chr3.1:77079563-77079582 | None:intergenic | 45.0% | |
| TTTCCAGGCTTGTCTTCAGA+AGG | - | chr3.1:77079572-77079591 | None:intergenic | 45.0% | |
| ! | CCGAAATCTTTTGCCGAACT+TGG | - | chr3.1:77078977-77078996 | None:intergenic | 45.0% |
| ! | TTCTGAAGACAAGCCTGGAA+AGG | + | chr3.1:77079571-77079590 | MS.gene06374:CDS | 45.0% |
| !! | AAAAGCACCTCCCCATAAAC+CGG | - | chr3.1:77079531-77079550 | None:intergenic | 45.0% |
| !! | AGTGCTGACCAAGAATATGC+CGG | + | chr3.1:77079509-77079528 | MS.gene06374:CDS | 45.0% |
| AACGTGGTGTATGTGATGCC+TGG | + | chr3.1:77078522-77078541 | MS.gene06374:CDS | 50.0% | |
| AGATACCCTGGATCAAAGCC+GGG | + | chr3.1:77079830-77079849 | MS.gene06374:CDS | 50.0% | |
| ATACACCACGTTCCCTAGCT+CGG | - | chr3.1:77078514-77078533 | None:intergenic | 50.0% | |
| ATTCGGCCACGCTCTATATG+AGG | - | chr3.1:77079441-77079460 | None:intergenic | 50.0% | |
| CAGATACCCTGGATCAAAGC+CGG | + | chr3.1:77079829-77079848 | MS.gene06374:CDS | 50.0% | |
| CCTAGATTGAGGGATGACGA+GGG | + | chr3.1:77079020-77079039 | MS.gene06374:CDS | 50.0% | |
| CTGTGCCTGATTCTCTGTTC+GGG | + | chr3.1:77079195-77079214 | MS.gene06374:CDS | 50.0% | |
| CTTCGTCAGAACCCTTTCCT+TGG | + | chr3.1:77079729-77079748 | MS.gene06374:CDS | 50.0% | |
| CTTTGTGCATCAGTCGGGTT+TGG | + | chr3.1:77078812-77078831 | MS.gene06374:CDS | 50.0% | |
| GCGAATTCTCAGGAGGTAGT+TGG | + | chr3.1:77079134-77079153 | MS.gene06374:CDS | 50.0% | |
| GCGTCAGTGTTCCAAGGAAA+GGG | - | chr3.1:77079743-77079762 | None:intergenic | 50.0% | |
| GCTGTGCCTGATTCTCTGTT+CGG | + | chr3.1:77079194-77079213 | MS.gene06374:CDS | 50.0% | |
| GGACCATCTTCCATACCCAA+AGG | - | chr3.1:77078594-77078613 | None:intergenic | 50.0% | |
| GGCATATTCTTGGTCAGCAC+TGG | - | chr3.1:77079510-77079529 | None:intergenic | 50.0% | |
| GGTCCTTTGGGTATGGAAGA+TGG | + | chr3.1:77078588-77078607 | MS.gene06374:CDS | 50.0% | |
| GTTCATCAGAATCCCGAGCT+AGG | + | chr3.1:77078498-77078517 | MS.gene06374:CDS | 50.0% | |
| TCCTAGATTGAGGGATGACG+AGG | + | chr3.1:77079019-77079038 | MS.gene06374:CDS | 50.0% | |
| TCTTCAGAAGGCTTTCCTGG+AGG | - | chr3.1:77079560-77079579 | None:intergenic | 50.0% | |
| TGCGTCAGTGTTCCAAGGAA+AGG | - | chr3.1:77079744-77079763 | None:intergenic | 50.0% | |
| TGGTTGTAGGGTCATTCCAC+AGG | + | chr3.1:77078560-77078579 | MS.gene06374:CDS | 50.0% | |
| TGTGCCTGATTCTCTGTTCG+GGG | + | chr3.1:77079196-77079215 | MS.gene06374:CDS | 50.0% | |
| ! | AAGCCTTCTGAAGACAAGCC+TGG | + | chr3.1:77079566-77079585 | MS.gene06374:CDS | 50.0% |
| ! | CAAGGAAAGGGTTCTGACGA+AGG | - | chr3.1:77079731-77079750 | None:intergenic | 50.0% |
| !! | AGGGTATTGCGAGTGGTTAC+GGG | + | chr3.1:77079804-77079823 | MS.gene06374:CDS | 50.0% |
| !! | GAATATGCCGGTTTATGGGG+AGG | + | chr3.1:77079521-77079540 | MS.gene06374:CDS | 50.0% |
| !! | GAGGGTATTGCGAGTGGTTA+CGG | + | chr3.1:77079803-77079822 | MS.gene06374:CDS | 50.0% |
| !!! | GGTTTATGGGGAGGTGCTTT+TGG | + | chr3.1:77079530-77079549 | MS.gene06374:CDS | 50.0% |
| ACCACTCGCAATACCCTCAC+CGG | - | chr3.1:77079801-77079820 | None:intergenic | 55.0% | |
| AGGGTCATTCCACAGGAGCT+TGG | + | chr3.1:77078567-77078586 | MS.gene06374:CDS | 55.0% | |
| CACTGACGCAGACTCTATGC+CGG | + | chr3.1:77079754-77079773 | MS.gene06374:CDS | 55.0% | |
| CCACAGGAGCTTGGTCCTTT+GGG | + | chr3.1:77078576-77078595 | MS.gene06374:CDS | 55.0% | |
| CCCTCGTCATCCCTCAATCT+AGG | - | chr3.1:77079023-77079042 | None:intergenic | 55.0% | |
| GAATCAGGCACAGCCCTAGA+AGG | - | chr3.1:77079188-77079207 | None:intergenic | 55.0% | |
| GAGTCTGCGTCAGTGTTCCA+AGG | - | chr3.1:77079749-77079768 | None:intergenic | 55.0% | |
| GATTCTCTGTTCGGGGAGGA+TGG | + | chr3.1:77079203-77079222 | MS.gene06374:CDS | 55.0% | |
| GGAGCTTGGTCCTTTGGGTA+TGG | + | chr3.1:77078581-77078600 | MS.gene06374:CDS | 55.0% | |
| GGCCGAATATGCACGACAGT+AGG | + | chr3.1:77079453-77079472 | MS.gene06374:CDS | 55.0% | |
| GGTTACGGGTTCAGATACCC+TGG | + | chr3.1:77079818-77079837 | MS.gene06374:CDS | 55.0% | |
| TACACCACGTTCCCTAGCTC+GGG | - | chr3.1:77078513-77078532 | None:intergenic | 55.0% | |
| TCCACAGGAGCTTGGTCCTT+TGG | + | chr3.1:77078575-77078594 | MS.gene06374:CDS | 55.0% | |
| TCCTCCCCGAACAGAGAATC+AGG | - | chr3.1:77079203-77079222 | None:intergenic | 55.0% | |
| TGCAGGCCACAAATGGCGAT+TGG | + | chr3.1:77078873-77078892 | MS.gene06374:CDS | 55.0% | |
| ! | AGTCGGGTTTGGAGTTGTCG+AGG | + | chr3.1:77078823-77078842 | MS.gene06374:CDS | 55.0% |
| ! | GGGTTTGGAGTTGTCGAGGA+AGG | + | chr3.1:77078827-77078846 | MS.gene06374:CDS | 55.0% |
| ! | TCAGCACTGGGAACTCGCAA+TGG | - | chr3.1:77079497-77079516 | None:intergenic | 55.0% |
| !!! | TATGGGGAGGTGCTTTTGGC+TGG | + | chr3.1:77079534-77079553 | MS.gene06374:CDS | 55.0% |
| CCCAAAGGACCAAGCTCCTG+TGG | - | chr3.1:77078579-77078598 | None:intergenic | 60.0% | |
| GAATCCCGAGCTAGGGAACG+TGG | + | chr3.1:77078506-77078525 | MS.gene06374:CDS | 60.0% | |
| GCCTGATTCTCTGTTCGGGG+AGG | + | chr3.1:77079199-77079218 | MS.gene06374:CDS | 60.0% | |
| TCTCTGTTCGGGGAGGATGG+TGG | + | chr3.1:77079206-77079225 | MS.gene06374:CDS | 60.0% | |
| TTGGCAATGGGAGGCAGGGA+AGG | - | chr3.1:77079971-77079990 | None:intergenic | 60.0% | |
| !! | ACCGGTGAGGGTATTGCGAG+TGG | + | chr3.1:77079797-77079816 | MS.gene06374:CDS | 60.0% |
| ! | AGCGAGCCCGGCTTTGATCC+AGG | - | chr3.1:77079839-77079858 | None:intergenic | 65.0% |
| ! | GCGAGCCCGGCTTTGATCCA+GGG | - | chr3.1:77079838-77079857 | None:intergenic | 65.0% |
| !!! | GGTGCTTTTGGCTGGCCTCC+AGG | + | chr3.1:77079542-77079561 | MS.gene06374:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 77078231 | 77080108 | 77078231 | ID=MS.gene06374 |
| chr3.1 | mRNA | 77078231 | 77080108 | 77078231 | ID=MS.gene06374.t1;Parent=MS.gene06374 |
| chr3.1 | exon | 77078231 | 77080108 | 77078231 | ID=MS.gene06374.t1.exon1;Parent=MS.gene06374.t1 |
| chr3.1 | CDS | 77078231 | 77080108 | 77078231 | ID=cds.MS.gene06374.t1;Parent=MS.gene06374.t1 |
| Gene Sequence |
| Protein sequence |
