Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065805.t1 | RHN68837.1 | 89.8 | 771 | 44 | 4 | 1 | 742 | 185 | 949 | 0.00E+00 | 1359 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065805.t1 | Q9ZVD5 | 66.7 | 778 | 215 | 10 | 1 | 742 | 112 | 881 | 1.3e-294 | 1013.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065805.t1 | A0A072VA82 | 89.8 | 771 | 44 | 4 | 1 | 742 | 116 | 880 | 0.0e+00 | 1359.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene065805 | 0.828064 | 1.11E-54 | -1.69E-46 |
| MS.gene049418 | MS.gene065805 | 0.817962 | 2.51E-52 | -1.69E-46 |
| MS.gene050630 | MS.gene065805 | 0.808566 | 2.91E-50 | -1.69E-46 |
| MS.gene051021 | MS.gene065805 | 0.814694 | 1.35E-51 | -1.69E-46 |
| MS.gene051248 | MS.gene065805 | 0.802747 | 4.85E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene065805 | 0.815202 | 1.04E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene065805 | 0.814024 | 1.90E-51 | -1.69E-46 |
| MS.gene051720 | MS.gene065805 | 0.821739 | 3.44E-53 | -1.69E-46 |
| MS.gene052732 | MS.gene065805 | 0.823569 | 1.29E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene065805 | 0.845669 | 3.52E-59 | -1.69E-46 |
| MS.gene053174 | MS.gene065805 | 0.835563 | 1.56E-56 | -1.69E-46 |
| MS.gene054550 | MS.gene065805 | 0.825281 | 5.11E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene065805 | 0.844124 | 9.18E-59 | -1.69E-46 |
| MS.gene055537 | MS.gene065805 | 0.812782 | 3.57E-51 | -1.69E-46 |
| MS.gene055890 | MS.gene065805 | 0.852479 | 4.49E-61 | -1.69E-46 |
| MS.gene055891 | MS.gene065805 | 0.81503 | 1.14E-51 | -1.69E-46 |
| MS.gene056169 | MS.gene065805 | 0.816056 | 6.73E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene065805 | 0.844642 | 6.66E-59 | -1.69E-46 |
| MS.gene056396 | MS.gene065805 | 0.826019 | 3.41E-54 | -1.69E-46 |
| MS.gene05894 | MS.gene065805 | 0.804512 | 2.08E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene065805 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene059154 | MS.gene065805 | 0.848031 | 7.94E-60 | -1.69E-46 |
| MS.gene060519 | MS.gene065805 | 0.801291 | 9.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065805.t1 | MTR_3g078647 | 89.754 | 771 | 44 | 4 | 1 | 742 | 116 | 880 | 0.0 | 1396 |
| MS.gene065805.t1 | MTR_5g087870 | 73.454 | 776 | 165 | 7 | 1 | 742 | 136 | 904 | 0.0 | 1167 |
| MS.gene065805.t1 | MTR_5g087870 | 71.005 | 776 | 162 | 8 | 1 | 742 | 136 | 882 | 0.0 | 1116 |
| MS.gene065805.t1 | MTR_5g087890 | 68.129 | 775 | 196 | 10 | 1 | 742 | 96 | 852 | 0.0 | 1060 |
| MS.gene065805.t1 | MTR_6g043180 | 65.335 | 776 | 227 | 8 | 1 | 742 | 95 | 862 | 0.0 | 1030 |
| MS.gene065805.t1 | MTR_3g083300 | 54.395 | 785 | 303 | 11 | 1 | 741 | 95 | 868 | 0.0 | 845 |
| MS.gene065805.t1 | MTR_3g010650 | 53.009 | 781 | 309 | 15 | 1 | 742 | 76 | 837 | 0.0 | 783 |
| MS.gene065805.t1 | MTR_6g477980 | 34.875 | 800 | 420 | 26 | 1 | 738 | 294 | 1054 | 1.69e-126 | 404 |
| MS.gene065805.t1 | MTR_6g477980 | 34.875 | 800 | 420 | 26 | 1 | 738 | 288 | 1048 | 1.97e-126 | 404 |
| MS.gene065805.t1 | MTR_2g059590 | 34.975 | 792 | 409 | 24 | 10 | 738 | 111 | 859 | 5.88e-125 | 395 |
| MS.gene065805.t1 | MTR_1g102630 | 33.587 | 789 | 425 | 22 | 10 | 738 | 174 | 923 | 1.50e-121 | 388 |
| MS.gene065805.t1 | MTR_4g113200 | 33.962 | 795 | 413 | 23 | 10 | 738 | 84 | 832 | 1.13e-120 | 383 |
| MS.gene065805.t1 | MTR_1g041345 | 33.165 | 790 | 428 | 24 | 10 | 738 | 179 | 929 | 1.23e-118 | 380 |
| MS.gene065805.t1 | MTR_4g056470 | 34.655 | 782 | 411 | 24 | 18 | 740 | 225 | 965 | 1.98e-111 | 362 |
| MS.gene065805.t1 | MTR_4g056430 | 34.100 | 783 | 412 | 25 | 18 | 738 | 186 | 926 | 9.69e-111 | 359 |
| MS.gene065805.t1 | MTR_2g059790 | 37.341 | 549 | 283 | 13 | 237 | 738 | 16 | 550 | 1.77e-101 | 324 |
| MS.gene065805.t1 | MTR_5g042590 | 30.653 | 796 | 447 | 32 | 9 | 738 | 213 | 969 | 1.93e-84 | 288 |
| MS.gene065805.t1 | MTR_4g083610 | 29.677 | 775 | 442 | 30 | 18 | 738 | 194 | 919 | 1.59e-76 | 266 |
| MS.gene065805.t1 | MTR_2g028910 | 27.907 | 774 | 457 | 26 | 18 | 738 | 250 | 975 | 1.11e-74 | 261 |
| MS.gene065805.t1 | MTR_2g059590 | 30.222 | 632 | 350 | 22 | 10 | 590 | 111 | 702 | 3.70e-69 | 241 |
| MS.gene065805.t1 | MTR_7g107230 | 36.940 | 268 | 62 | 6 | 206 | 473 | 59 | 219 | 1.86e-36 | 138 |
| MS.gene065805.t1 | MTR_3g101730 | 32.258 | 155 | 83 | 4 | 535 | 683 | 34 | 172 | 3.87e-14 | 71.6 |
| MS.gene065805.t1 | MTR_6g037320 | 35.556 | 135 | 56 | 3 | 495 | 629 | 1 | 104 | 1.04e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065805.t1 | AT2G27040 | 66.967 | 778 | 213 | 10 | 1 | 742 | 112 | 881 | 0.0 | 1055 |
| MS.gene065805.t1 | AT2G27040 | 66.967 | 778 | 213 | 10 | 1 | 742 | 112 | 881 | 0.0 | 1055 |
| MS.gene065805.t1 | AT5G21150 | 62.710 | 775 | 242 | 10 | 1 | 742 | 93 | 853 | 0.0 | 976 |
| MS.gene065805.t1 | AT5G21030 | 55.513 | 780 | 260 | 15 | 1 | 742 | 81 | 811 | 0.0 | 820 |
| MS.gene065805.t1 | AT5G21030 | 55.128 | 780 | 259 | 14 | 1 | 742 | 81 | 807 | 0.0 | 816 |
| MS.gene065805.t1 | AT2G32940 | 51.737 | 777 | 329 | 9 | 1 | 742 | 82 | 847 | 0.0 | 781 |
| MS.gene065805.t1 | AT5G43810 | 33.081 | 792 | 426 | 23 | 10 | 738 | 188 | 938 | 1.26e-121 | 388 |
| MS.gene065805.t1 | AT5G43810 | 33.081 | 792 | 426 | 23 | 10 | 738 | 188 | 938 | 1.26e-121 | 388 |
| MS.gene065805.t1 | AT5G43810 | 33.081 | 792 | 426 | 23 | 10 | 738 | 188 | 938 | 1.26e-121 | 388 |
| MS.gene065805.t1 | AT5G43810 | 33.081 | 792 | 426 | 23 | 10 | 738 | 188 | 938 | 1.26e-121 | 388 |
| MS.gene065805.t1 | AT2G27880 | 34.430 | 790 | 411 | 27 | 10 | 738 | 207 | 950 | 5.83e-121 | 387 |
| MS.gene065805.t1 | AT1G48410 | 33.917 | 799 | 410 | 26 | 10 | 738 | 239 | 989 | 3.80e-119 | 383 |
| MS.gene065805.t1 | AT1G48410 | 33.875 | 800 | 411 | 26 | 10 | 738 | 239 | 991 | 6.24e-119 | 382 |
| MS.gene065805.t1 | AT1G48410 | 33.875 | 800 | 411 | 26 | 10 | 738 | 239 | 991 | 6.24e-119 | 382 |
| MS.gene065805.t1 | AT1G69440 | 29.345 | 794 | 449 | 31 | 3 | 738 | 203 | 942 | 4.79e-75 | 262 |
| MS.gene065805.t1 | AT1G31280 | 28.372 | 786 | 435 | 28 | 18 | 738 | 235 | 957 | 4.10e-74 | 260 |
| MS.gene065805.t1 | AT1G31290 | 27.928 | 777 | 462 | 25 | 18 | 740 | 333 | 1065 | 4.38e-70 | 249 |
| MS.gene065805.t1 | AT1G31290 | 27.928 | 777 | 462 | 25 | 18 | 740 | 407 | 1139 | 4.62e-70 | 250 |
| MS.gene065805.t1 | AT1G31290 | 27.928 | 777 | 462 | 25 | 18 | 740 | 371 | 1103 | 6.14e-70 | 249 |
Find 0 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTATTTTAAAAAAAAA+TGG | + | 21603:9931-9950 | MS.gene065805:intergenic | 0.0% |
| !! | TTTGTAGAAATTAATAATAA+AGG | + | 21603:9388-9407 | MS.gene065805:intergenic | 10.0% |
| !! | AATAAATTAAATTGATACAG+AGG | - | 21603:9270-9289 | MS.gene065805:intron | 15.0% |
| !! | AATAACATGTTAATAAACAA+TGG | + | 21603:9820-9839 | MS.gene065805:intergenic | 15.0% |
| !! | AATACAACCAAATTTAAAAA+AGG | + | 21603:9234-9253 | MS.gene065805:intergenic | 15.0% |
| !!! | ATTTATTTTTCTAGATAGAT+TGG | - | 21603:10552-10571 | MS.gene065805:CDS | 15.0% |
| !!! | CATTTTTTTTTTAGAAACAA+TGG | - | 21603:5383-5402 | MS.gene065805:intron | 15.0% |
| !! | AACAAAGAAGATAGAAAAAT+GGG | - | 21603:7813-7832 | MS.gene065805:intron | 20.0% |
| !! | AAGAGTCAATGATAATTATT+TGG | - | 21603:8315-8334 | MS.gene065805:intron | 20.0% |
| !! | AATTAACTTAGATTGATCTT+AGG | + | 21603:10467-10486 | MS.gene065805:intergenic | 20.0% |
| !! | AGAGTCAATGATAATTATTT+GGG | - | 21603:8316-8335 | MS.gene065805:intron | 20.0% |
| !! | AGGGATTTAAAAGAAATTAA+AGG | + | 21603:6225-6244 | MS.gene065805:intergenic | 20.0% |
| !! | ATTAGAATTGGAAATATGAA+AGG | - | 21603:7889-7908 | MS.gene065805:intron | 20.0% |
| !! | CTGAAAATAATTATGTTATC+TGG | + | 21603:9165-9184 | MS.gene065805:intergenic | 20.0% |
| !! | GGAATAAAAAAAAATACCTT+TGG | + | 21603:7023-7042 | MS.gene065805:intergenic | 20.0% |
| !! | TTAATCATGAATTAGAACAT+AGG | + | 21603:10582-10601 | MS.gene065805:intergenic | 20.0% |
| !!! | ATATATGAAAACTGATTTCA+AGG | + | 21603:5331-5350 | MS.gene065805:intergenic | 20.0% |
| !!! | ATATTGTTATTTAACAGTTG+AGG | - | 21603:9323-9342 | MS.gene065805:CDS | 20.0% |
| !!! | ATTTGAAGTTGAAAATATTG+AGG | + | 21603:5691-5710 | MS.gene065805:intergenic | 20.0% |
| !!! | ATTTTGACTTTTAACTTCTT+AGG | - | 21603:9626-9645 | MS.gene065805:CDS | 20.0% |
| !!! | CAGATAACATAATTATTTTC+AGG | - | 21603:9163-9182 | MS.gene065805:intron | 20.0% |
| !!! | TAATTTCTTTTAAATCCCTT+TGG | - | 21603:6226-6245 | MS.gene065805:intron | 20.0% |
| !!! | TATATGAAAACTGATTTCAA+GGG | + | 21603:5330-5349 | MS.gene065805:intergenic | 20.0% |
| !!! | TCCTTTTATATATACTATCT+GGG | + | 21603:9068-9087 | MS.gene065805:intergenic | 20.0% |
| !!! | TTATTAACATGTTATTTTGC+AGG | - | 21603:9824-9843 | MS.gene065805:CDS | 20.0% |
| !!! | TTGTATTTTGAACTGATTAT+TGG | - | 21603:7594-7613 | MS.gene065805:intron | 20.0% |
| !!! | TTTGCAATATATTGTTTTTC+TGG | - | 21603:7230-7249 | MS.gene065805:intron | 20.0% |
| ! | AATGCTAAATATGTACTTGT+AGG | - | 21603:8830-8849 | MS.gene065805:CDS | 25.0% |
| ! | AATTATTCTTTGACATCCAA+GGG | - | 21603:8233-8252 | MS.gene065805:intron | 25.0% |
| ! | ACCATATTTATTCAAGTAGA+TGG | + | 21603:8489-8508 | MS.gene065805:intergenic | 25.0% |
| ! | ATTTCCATATAACTTTCATG+AGG | + | 21603:10201-10220 | MS.gene065805:intergenic | 25.0% |
| ! | CAACAAAGAAGATAGAAAAA+TGG | - | 21603:7812-7831 | MS.gene065805:intron | 25.0% |
| ! | CATATTTATTCAAGTAGATG+GGG | + | 21603:8487-8506 | MS.gene065805:intergenic | 25.0% |
| ! | CCAAATTTAAAAAAGGAAGA+AGG | + | 21603:9227-9246 | MS.gene065805:intergenic | 25.0% |
| ! | CCATATTTATTCAAGTAGAT+GGG | + | 21603:8488-8507 | MS.gene065805:intergenic | 25.0% |
| ! | CTATTTCAATAGTTGAAGTT+CGG | - | 21603:7619-7638 | MS.gene065805:intron | 25.0% |
| ! | GAAGAAAATTGTCTGAAAAT+AGG | + | 21603:9046-9065 | MS.gene065805:intergenic | 25.0% |
| ! | GGAAAAAACTGTGATATTTA+TGG | - | 21603:8144-8163 | MS.gene065805:CDS | 25.0% |
| ! | TAAACCTCATGAAAGTTATA+TGG | - | 21603:10194-10213 | MS.gene065805:intron | 25.0% |
| ! | TAGAAAAATAAATGATGTGC+AGG | + | 21603:10545-10564 | MS.gene065805:intergenic | 25.0% |
| ! | TCCCAGATAGTATATATAAA+AGG | - | 21603:9064-9083 | MS.gene065805:CDS | 25.0% |
| ! | TGACAATATCATTCAAAACA+TGG | + | 21603:6820-6839 | MS.gene065805:intergenic | 25.0% |
| ! | TGTTCACCTTATTAATATGA+TGG | - | 21603:7181-7200 | MS.gene065805:CDS | 25.0% |
| ! | TTAAATGTCTTTGCATTGTA+CGG | + | 21603:5467-5486 | MS.gene065805:intergenic | 25.0% |
| ! | TTCTACTTACACATATGATA+GGG | + | 21603:10390-10409 | MS.gene065805:intergenic | 25.0% |
| ! | TTCTTGCCATCATATTAATA+AGG | + | 21603:7190-7209 | MS.gene065805:intergenic | 25.0% |
| !! | CAACAATTACCACAAATTTT+GGG | + | 21603:9681-9700 | MS.gene065805:intergenic | 25.0% |
| !! | CATGAGGTATCAAAAATATA+GGG | - | 21603:8978-8997 | MS.gene065805:intron | 25.0% |
| !! | CATTTTTCTATCTTCTTTGT+TGG | + | 21603:7814-7833 | MS.gene065805:intergenic | 25.0% |
| !! | GTCCTTTTATATATACTATC+TGG | + | 21603:9069-9088 | MS.gene065805:intergenic | 25.0% |
| !! | TATACTGGATTTTAGATGTT+AGG | - | 21603:7477-7496 | MS.gene065805:CDS | 25.0% |
| !! | TCATGAGGTATCAAAAATAT+AGG | - | 21603:8977-8996 | MS.gene065805:intron | 25.0% |
| !! | TGCTTTATTATTCCAGAATT+TGG | - | 21603:10226-10245 | MS.gene065805:CDS | 25.0% |
| !! | TGTTATTGTGATTTTCAATG+TGG | - | 21603:9299-9318 | MS.gene065805:intron | 25.0% |
| !!! | AATATCACAAAAGTATTAGC+AGG | + | 21603:5642-5661 | MS.gene065805:intergenic | 25.0% |
| !!! | AATTCTGGAATAATAAAGCA+AGG | + | 21603:10226-10245 | MS.gene065805:intergenic | 25.0% |
| !!! | AGAGTTTTATTTGTTCTCAA+TGG | - | 21603:8769-8788 | MS.gene065805:intron | 25.0% |
| !!! | ATGATCTCTAACATTTTGAT+TGG | + | 21603:5995-6014 | MS.gene065805:intergenic | 25.0% |
| !!! | ATGGTGTTTTTTGTCAATAT+AGG | - | 21603:9482-9501 | MS.gene065805:intron | 25.0% |
| !!! | CAGTTTTACTTTGAAGAAAA+GGG | - | 21603:6351-6370 | MS.gene065805:intron | 25.0% |
| !!! | CCTTCTTCCTTTTTTAAATT+TGG | - | 21603:9224-9243 | MS.gene065805:intron | 25.0% |
| !!! | GGTATTTTTTTTTATTCCTG+TGG | - | 21603:7025-7044 | MS.gene065805:intron | 25.0% |
| !!! | TAATTATCATTGACTCTTAG+AGG | + | 21603:8313-8332 | MS.gene065805:intergenic | 25.0% |
| !!! | TGAGTTTGAAATTGTTTTAG+AGG | - | 21603:5250-5269 | MS.gene065805:intron | 25.0% |
| !!! | TGGTGTTTTTTGTCAATATA+GGG | - | 21603:9483-9502 | MS.gene065805:intron | 25.0% |
| AAAAATAAACATCAGACACC+AGG | + | 21603:10098-10117 | None:intergenic | 30.0% | |
| AAAATTCTCATTCTCTCTTG+TGG | + | 21603:6777-6796 | None:intergenic | 30.0% | |
| AAATCTGATCTGCTTTATAC+TGG | - | 21603:7462-7481 | MS.gene065805:CDS | 30.0% | |
| AACTTCAAATTGTCTATGAC+AGG | - | 21603:5701-5720 | MS.gene065805:intron | 30.0% | |
| AAGAATTACTTACTGCTTAG+CGG | + | 21603:5612-5631 | MS.gene065805:intergenic | 30.0% | |
| AATAATTCCAATATCAGCAC+TGG | + | 21603:8220-8239 | MS.gene065805:intergenic | 30.0% | |
| AATATGAAGGAGTTCAGATA+TGG | + | 21603:8460-8479 | MS.gene065805:intergenic | 30.0% | |
| AATCAAGAGTGGAAAATATG+TGG | - | 21603:6156-6175 | MS.gene065805:intron | 30.0% | |
| AATGCCAAGGTATATAGTTA+CGG | - | 21603:8358-8377 | MS.gene065805:intron | 30.0% | |
| ACATATTTAGCATTAAGCAC+AGG | + | 21603:8824-8843 | MS.gene065805:intergenic | 30.0% | |
| ACTTAAAACTAGCAACTATG+GGG | - | 21603:6920-6939 | MS.gene065805:intron | 30.0% | |
| ACTTCAAATTGTCTATGACA+GGG | - | 21603:5702-5721 | MS.gene065805:intron | 30.0% | |
| AGGACAATAGAGAGATTAAA+TGG | + | 21603:8595-8614 | MS.gene065805:intergenic | 30.0% | |
| AGGTAGAAATCATAGTTTCT+TGG | + | 21603:9878-9897 | MS.gene065805:intergenic | 30.0% | |
| ATAAAGTTGTTGTGTTGTAC+TGG | - | 21603:5304-5323 | MS.gene065805:intron | 30.0% | |
| ATAAGAGCAAAGATGAACAA+AGG | + | 21603:6665-6684 | MS.gene065805:intergenic | 30.0% | |
| ATCAACACATCATAGCTTAA+GGG | - | 21603:6851-6870 | MS.gene065805:CDS | 30.0% | |
| ATCAGTCTAATGCAATCAAA+TGG | + | 21603:10421-10440 | MS.gene065805:intergenic | 30.0% | |
| ATTGTTCAAGATCTTCCAAA+AGG | + | 21603:7259-7278 | MS.gene065805:intergenic | 30.0% | |
| CACTTAAAACTAGCAACTAT+GGG | - | 21603:6919-6938 | MS.gene065805:intron | 30.0% | |
| CAGGAACAATGTACAAAAAA+GGG | + | 21603:10079-10098 | MS.gene065805:intergenic | 30.0% | |
| CATATGTGTAAGTAGAACAT+TGG | - | 21603:10393-10412 | MS.gene065805:CDS | 30.0% | |
| CCCATCTACTTGAATAAATA+TGG | - | 21603:8485-8504 | MS.gene065805:intron | 30.0% | |
| CGCAAGAATGATGATTTAAA+CGG | + | 21603:9009-9028 | MS.gene065805:intergenic | 30.0% | |
| CTATGTAATTTGGAAGATTG+CGG | + | 21603:5918-5937 | MS.gene065805:intergenic | 30.0% | |
| GAATTATTCTTTGACATCCA+AGG | - | 21603:8232-8251 | MS.gene065805:intron | 30.0% | |
| GAGTTCTTGATATCATATTG+AGG | - | 21603:5579-5598 | MS.gene065805:intron | 30.0% | |
| GATCTTCCATGTATTAATGT+TGG | - | 21603:6451-6470 | MS.gene065805:intron | 30.0% | |
| GCCATAACAAAGTTGAATAT+GGG | + | 21603:5875-5894 | MS.gene065805:intergenic | 30.0% | |
| GCCTCTGATTTCAAAATATA+GGG | - | 21603:8872-8891 | MS.gene065805:CDS | 30.0% | |
| GTGAGGGATATAATTAGAAT+TGG | - | 21603:7877-7896 | MS.gene065805:intron | 30.0% | |
| GTTCTACTTACACATATGAT+AGG | + | 21603:10391-10410 | MS.gene065805:intergenic | 30.0% | |
| GTTGAGACATCTATGTAATT+TGG | + | 21603:5928-5947 | MS.gene065805:intergenic | 30.0% | |
| TAAACATGCTTCAACAAAAC+AGG | + | 21603:9417-9436 | MS.gene065805:intergenic | 30.0% | |
| TAAATGTCTTTGCATTGTAC+GGG | + | 21603:5466-5485 | MS.gene065805:intergenic | 30.0% | |
| TAAGACTCAATCACATTATC+TGG | - | 21603:7279-7298 | MS.gene065805:intron | 30.0% | |
| TAAGAGCAAAGATGAACAAA+GGG | + | 21603:6664-6683 | MS.gene065805:intergenic | 30.0% | |
| TATCAACACATCATAGCTTA+AGG | - | 21603:6850-6869 | MS.gene065805:CDS | 30.0% | |
| TATGTTGAAGATAAATGCCA+AGG | - | 21603:8345-8364 | MS.gene065805:intron | 30.0% | |
| TATTTGTCAAACATCAAGAC+AGG | + | 21603:7129-7148 | MS.gene065805:intergenic | 30.0% | |
| TATTTGTTCTCAATGGTGTT+AGG | - | 21603:8776-8795 | MS.gene065805:intron | 30.0% | |
| TCCCATATTCAACTTTGTTA+TGG | - | 21603:5871-5890 | MS.gene065805:intron | 30.0% | |
| TGCCATAACAAAGTTGAATA+TGG | + | 21603:5876-5895 | MS.gene065805:intergenic | 30.0% | |
| ! | ACATATTTTCCACTCTTGAT+TGG | + | 21603:6157-6176 | MS.gene065805:intergenic | 30.0% |
| ! | AGAGAGAATGAGAATTTTGA+CGG | - | 21603:6779-6798 | MS.gene065805:intron | 30.0% |
| ! | AGATCATTTTCAGATTGACT+GGG | - | 21603:6008-6027 | MS.gene065805:intron | 30.0% |
| ! | ATATTGCGATTCTTTTCTGA+TGG | - | 21603:9451-9470 | MS.gene065805:intron | 30.0% |
| ! | GAGAAAAGCTTGTTTACTAT+TGG | - | 21603:5206-5225 | MS.gene065805:intron | 30.0% |
| ! | GATCAGATTTTCATGCAATA+CGG | + | 21603:7452-7471 | MS.gene065805:intergenic | 30.0% |
| ! | GCAACAATTACCACAAATTT+TGG | + | 21603:9682-9701 | MS.gene065805:intergenic | 30.0% |
| ! | TACTGATGAAATGACTGTTT+TGG | - | 21603:6384-6403 | MS.gene065805:intron | 30.0% |
| ! | TTTACTTTGAAGAAAAGGGA+TGG | - | 21603:6355-6374 | MS.gene065805:intron | 30.0% |
| ! | TTTTCTTCAAACACATCGAA+TGG | + | 21603:8015-8034 | MS.gene065805:intergenic | 30.0% |
| !! | AAAAAAAATACCTTTGGAGC+AGG | + | 21603:7017-7036 | MS.gene065805:intergenic | 30.0% |
| !! | GCAGTTTTACTTTGAAGAAA+AGG | - | 21603:6350-6369 | MS.gene065805:intron | 30.0% |
| !! | TGCAAAAGCATTTGCTAAAA+AGG | + | 21603:7216-7235 | MS.gene065805:intergenic | 30.0% |
| !!! | AAGAAGAATCTTGCTGATTT+TGG | - | 21603:8265-8284 | MS.gene065805:intron | 30.0% |
| !!! | CAGAGTTGTTTTTACATGAT+GGG | - | 21603:6297-6316 | MS.gene065805:CDS | 30.0% |
| !!! | GTTTTTTGTCAATATAGGGA+TGG | - | 21603:9487-9506 | MS.gene065805:intron | 30.0% |
| !!! | TCTAGTTTTGAACATGATTG+TGG | - | 21603:9993-10012 | MS.gene065805:CDS | 30.0% |
| !!! | TGTTTTTACATGATGGGTTT+AGG | - | 21603:6303-6322 | MS.gene065805:intron | 30.0% |
| !!! | TTGTTTTTCTGGTTTCCTTT+TGG | - | 21603:7241-7260 | MS.gene065805:intron | 30.0% |
| !!! | TTTTTTTGTTTTGTTGCCGA+AGG | - | 21603:6896-6915 | MS.gene065805:intron | 30.0% |
| AAACAATCAACACCAGAAGT+GGG | + | 21603:9204-9223 | None:intergenic | 35.0% | |
| AAATACGTAAGCTCTTTGCA+TGG | + | 21603:6195-6214 | None:intergenic | 35.0% | |
| AAATTCCATCGTCCATTTCT+CGG | + | 21603:7664-7683 | MS.gene065805:intergenic | 35.0% | |
| AACAGTGATTTCTCATACAG+GGG | + | 21603:7165-7184 | MS.gene065805:intergenic | 35.0% | |
| AACTCTATTATCGCTTACAG+CGG | + | 21603:8755-8774 | MS.gene065805:intergenic | 35.0% | |
| AAGCAACAAAGAAGGAATTG+AGG | + | 21603:8117-8136 | MS.gene065805:intergenic | 35.0% | |
| AATACGTAAGCTCTTTGCAT+GGG | + | 21603:6194-6213 | MS.gene065805:intergenic | 35.0% | |
| AATCTCTATCCACACTTCAA+AGG | - | 21603:6721-6740 | MS.gene065805:intron | 35.0% | |
| ACGGAAAGAATTCCAAATTC+TGG | + | 21603:10241-10260 | MS.gene065805:intergenic | 35.0% | |
| ACTACCATGATAATTCAACC+TGG | - | 21603:5946-5965 | MS.gene065805:CDS | 35.0% | |
| AGCTCACATAAGTAGAATGA+CGG | + | 21603:10260-10279 | MS.gene065805:intergenic | 35.0% | |
| ATCTCTATCCACACTTCAAA+GGG | - | 21603:6722-6741 | MS.gene065805:intron | 35.0% | |
| ATTTACTTGCTTCCTCAAAC+AGG | - | 21603:6089-6108 | MS.gene065805:CDS | 35.0% | |
| ATTTAGAAGCGAGTCAATGT+TGG | + | 21603:7754-7773 | MS.gene065805:intergenic | 35.0% | |
| CAAGGAATTTGCATATGATG+GGG | - | 21603:5184-5203 | MS.gene065805:intron | 35.0% | |
| CAAGGTATATAGTTACGGTT+CGG | - | 21603:8363-8382 | MS.gene065805:intron | 35.0% | |
| CCAGGAACAATGTACAAAAA+AGG | + | 21603:10080-10099 | MS.gene065805:intergenic | 35.0% | |
| CGATGGAATTTCAAACAACA+AGG | - | 21603:7673-7692 | MS.gene065805:CDS | 35.0% | |
| CTACCATGATAATTCAACCT+GGG | - | 21603:5947-5966 | MS.gene065805:CDS | 35.0% | |
| CTTCAAATTGTCTATGACAG+GGG | - | 21603:5703-5722 | MS.gene065805:intron | 35.0% | |
| GAAATTAAGAAATCCACCAC+AGG | + | 21603:5973-5992 | MS.gene065805:intergenic | 35.0% | |
| GAACAGTGATTTCTCATACA+GGG | + | 21603:7166-7185 | MS.gene065805:intergenic | 35.0% | |
| GAGAGTTGAGAAAATGTTTG+AGG | - | 21603:8065-8084 | MS.gene065805:intron | 35.0% | |
| GCAAAATTCTTGGATCATTG+TGG | + | 21603:5756-5775 | MS.gene065805:intergenic | 35.0% | |
| GCAAGGAATTTGCATATGAT+GGG | - | 21603:5183-5202 | MS.gene065805:intron | 35.0% | |
| GCAAGTTTCTTGATGAAAAC+TGG | - | 21603:9652-9671 | MS.gene065805:CDS | 35.0% | |
| GCACTTAAAACTAGCAACTA+TGG | - | 21603:6918-6937 | MS.gene065805:intron | 35.0% | |
| GGCCTCTGATTTCAAAATAT+AGG | - | 21603:8871-8890 | MS.gene065805:CDS | 35.0% | |
| GTTAATGGTAACAAGTTGTG+AGG | - | 21603:8387-8406 | MS.gene065805:intron | 35.0% | |
| TAGATGGGGAACAAATATGA+AGG | + | 21603:8473-8492 | MS.gene065805:intergenic | 35.0% | |
| TCAACACATCATAGCTTAAG+GGG | - | 21603:6852-6871 | MS.gene065805:CDS | 35.0% | |
| TGAACAGTGATTTCTCATAC+AGG | + | 21603:7167-7186 | MS.gene065805:intergenic | 35.0% | |
| TGATCAGACATGATCAATGA+AGG | + | 21603:6070-6089 | MS.gene065805:intergenic | 35.0% | |
| TGTGGAATTTCTATAAGCAC+AGG | - | 21603:6963-6982 | MS.gene065805:intron | 35.0% | |
| TTCCATGTATTAATGTTGGC+AGG | - | 21603:6455-6474 | MS.gene065805:intron | 35.0% | |
| TTGGAAACAATAGGAAGAGA+TGG | + | 21603:8661-8680 | MS.gene065805:intergenic | 35.0% | |
| TTTGATATCACAGTTACCAG+AGG | - | 21603:10490-10509 | MS.gene065805:intron | 35.0% | |
| ! | AACTGTTTTACTTTGTGCTC+AGG | - | 21603:10283-10302 | MS.gene065805:CDS | 35.0% |
| ! | AAGAATTTTGCTGATGTTGG+GGG | - | 21603:5765-5784 | MS.gene065805:intron | 35.0% |
| ! | ACATATGCTTCTGACTTGAA+TGG | - | 21603:5161-5180 | MS.gene065805:CDS | 35.0% |
| ! | ACTGTTTTACTTTGTGCTCA+GGG | - | 21603:10284-10303 | MS.gene065805:CDS | 35.0% |
| ! | AGCAAGATTCTTCTTTTTCC+AGG | + | 21603:8260-8279 | MS.gene065805:intergenic | 35.0% |
| ! | ATATTCTGAAAACACTTGCC+AGG | + | 21603:9760-9779 | MS.gene065805:intergenic | 35.0% |
| ! | ATTTTCCACTCTTGATTGGA+TGG | + | 21603:6153-6172 | MS.gene065805:intergenic | 35.0% |
| ! | ATTTTCTCAACTCTCACCAT+TGG | + | 21603:8060-8079 | MS.gene065805:intergenic | 35.0% |
| ! | CAAGAATTTTGCTGATGTTG+GGG | - | 21603:5764-5783 | MS.gene065805:intron | 35.0% |
| ! | CATCATTCTTGCGCTTTTAT+TGG | - | 21603:9016-9035 | MS.gene065805:intron | 35.0% |
| ! | CCAAGAATTTTGCTGATGTT+GGG | - | 21603:5763-5782 | MS.gene065805:intron | 35.0% |
| ! | GAGATCATTTTCAGATTGAC+TGG | - | 21603:6007-6026 | MS.gene065805:intron | 35.0% |
| ! | GATCATTTTCAGATTGACTG+GGG | - | 21603:6009-6028 | MS.gene065805:intron | 35.0% |
| ! | GCAAGATTCTTCTTTTTCCA+GGG | + | 21603:8259-8278 | MS.gene065805:intergenic | 35.0% |
| ! | TAACAAAGAAGTACACAGTC+AGG | + | 21603:7060-7079 | MS.gene065805:intergenic | 35.0% |
| ! | TCCAAGAATTTTGCTGATGT+TGG | - | 21603:5762-5781 | MS.gene065805:intron | 35.0% |
| !! | CAAGAAAGTATCAGATACTG+AGG | - | 21603:8945-8964 | MS.gene065805:intron | 35.0% |
| !!! | CAATTTTCCAGTGCTGATAT+TGG | - | 21603:8210-8229 | MS.gene065805:intron | 35.0% |
| !!! | CCTTTTTTGTACATTGTTCC+TGG | - | 21603:10077-10096 | MS.gene065805:CDS | 35.0% |
| !!! | CTTCACCCTCAGATTTTTTA+GGG | + | 21603:6124-6143 | MS.gene065805:intergenic | 35.0% |
| !!! | GCAGAGTTGTTTTTACATGA+TGG | - | 21603:6296-6315 | MS.gene065805:CDS | 35.0% |
| !!! | GCCCTATATTTTGAAATCAG+AGG | + | 21603:8876-8895 | MS.gene065805:intergenic | 35.0% |
| !!! | TATCACAGTTTTTTCCGATC+AGG | + | 21603:8140-8159 | MS.gene065805:intergenic | 35.0% |
| !!! | TCAAACTCAAGCTTGTTTTG+AGG | + | 21603:5239-5258 | MS.gene065805:intergenic | 35.0% |
| !!! | TCTTCACCCTCAGATTTTTT+AGG | + | 21603:6125-6144 | MS.gene065805:intergenic | 35.0% |
| !!! | TTGCTAGTTTTAAGTGCCTT+CGG | + | 21603:6915-6934 | MS.gene065805:intergenic | 35.0% |
| !!! | TTTTCTGATGGTTCTGATCA+TGG | - | 21603:9463-9482 | MS.gene065805:intron | 35.0% |
| AAAATGTCATCCTCAGCCAA+AGG | + | 21603:6245-6264 | None:intergenic | 40.0% | |
| AAATGTCATCCTCAGCCAAA+GGG | + | 21603:6244-6263 | MS.gene065805:intergenic | 40.0% | |
| AACTGGACTCCCAAAATTTG+TGG | - | 21603:9669-9688 | MS.gene065805:CDS | 40.0% | |
| AATCCTTATCCCATCAAGTG+AGG | + | 21603:6566-6585 | MS.gene065805:intergenic | 40.0% | |
| AATCGTAGTCCTGATGCTAA+TGG | - | 21603:5407-5426 | MS.gene065805:intron | 40.0% | |
| ACACATCCATTCCTAGAATG+AGG | + | 21603:8693-8712 | MS.gene065805:intergenic | 40.0% | |
| ACATTCAGTCCAAACTTCCA+GGG | - | 21603:8088-8107 | MS.gene065805:intron | 40.0% | |
| ACCTATATGCTATGCACACT+TGG | - | 21603:10638-10657 | MS.gene065805:CDS | 40.0% | |
| AGAGGACCCTAAAAAATCTG+AGG | - | 21603:6115-6134 | MS.gene065805:CDS | 40.0% | |
| AGGTCTTCTGGATGTCATAT+TGG | - | 21603:8796-8815 | MS.gene065805:intron | 40.0% | |
| AGTAGCGCAGATCTATCTTT+CGG | + | 21603:6426-6445 | MS.gene065805:intergenic | 40.0% | |
| ATAGCATATAGGTGCAACTG+CGG | + | 21603:10631-10650 | MS.gene065805:intergenic | 40.0% | |
| CAACACATCATAGCTTAAGG+GGG | - | 21603:6853-6872 | MS.gene065805:CDS | 40.0% | |
| CAAGAACTCTAACAGCTTCT+TGG | + | 21603:5568-5587 | MS.gene065805:intergenic | 40.0% | |
| CAATAGTTGAAGTTCGGCAA+TGG | - | 21603:7625-7644 | MS.gene065805:intron | 40.0% | |
| CACATCCATTCCTAGAATGA+GGG | + | 21603:8692-8711 | MS.gene065805:intergenic | 40.0% | |
| CCCAACATCAGCAAAATTCT+TGG | + | 21603:5766-5785 | MS.gene065805:intergenic | 40.0% | |
| CGAACCGTAACTATATACCT+TGG | + | 21603:8365-8384 | MS.gene065805:intergenic | 40.0% | |
| CTTCAAACACATCGAATGGT+TGG | + | 21603:8011-8030 | MS.gene065805:intergenic | 40.0% | |
| GAAACAATCAACACCAGAAG+TGG | + | 21603:9205-9224 | MS.gene065805:intergenic | 40.0% | |
| GAAGATTTCACTCCGAGAAA+TGG | - | 21603:7649-7668 | MS.gene065805:intron | 40.0% | |
| GAGGACCCTAAAAAATCTGA+GGG | - | 21603:6116-6135 | MS.gene065805:CDS | 40.0% | |
| GATCATTGTGGAAGAAAGAC+TGG | + | 21603:5744-5763 | MS.gene065805:intergenic | 40.0% | |
| GCATTTGCAATCGCATACAT+AGG | + | 21603:5518-5537 | MS.gene065805:intergenic | 40.0% | |
| GCTCTTATAGCTGTGTGAAT+TGG | - | 21603:6677-6696 | MS.gene065805:CDS | 40.0% | |
| GGCAAGGAATTTGCATATGA+TGG | - | 21603:5182-5201 | MS.gene065805:intron | 40.0% | |
| GTATCAGATACTGAGGATGA+AGG | - | 21603:8952-8971 | MS.gene065805:intron | 40.0% | |
| TCACTTGATGGGATAAGGAT+TGG | - | 21603:6565-6584 | MS.gene065805:intron | 40.0% | |
| TCATTGTCTCCATTAGCATC+AGG | + | 21603:5419-5438 | MS.gene065805:intergenic | 40.0% | |
| TGATAGTCATTTCTACCTGC+TGG | + | 21603:5285-5304 | MS.gene065805:intergenic | 40.0% | |
| TGATGATTTCACCAACTGCA+GGG | - | 21603:9098-9117 | MS.gene065805:CDS | 40.0% | |
| TTAATGTTGGCAGGCCTAAA+CGG | - | 21603:6464-6483 | MS.gene065805:intron | 40.0% | |
| TTCAGAGTAACAAGGAAGAG+CGG | + | 21603:7361-7380 | MS.gene065805:intergenic | 40.0% | |
| TTCTCTACAGTAAAGAGAGC+AGG | + | 21603:7332-7351 | MS.gene065805:intergenic | 40.0% | |
| TTGAAGAAAAGGGATGGTGA+GGG | - | 21603:6361-6380 | MS.gene065805:intron | 40.0% | |
| TTTGAAGAAAAGGGATGGTG+AGG | - | 21603:6360-6379 | MS.gene065805:intron | 40.0% | |
| ! | AATTGCTTGTTGCGCTCATA+GGG | - | 21603:7552-7571 | MS.gene065805:intron | 40.0% |
| ! | CTTCTTTGTTGCTTCCTGAT+CGG | - | 21603:8123-8142 | MS.gene065805:CDS | 40.0% |
| ! | CTTTTAAATCCCTTTGGCTG+AGG | - | 21603:6232-6251 | MS.gene065805:intron | 40.0% |
| ! | TAATTGCTTGTTGCGCTCAT+AGG | - | 21603:7551-7570 | MS.gene065805:intron | 40.0% |
| ! | TCAGCACTGGAAAATTGCTT+AGG | + | 21603:8207-8226 | MS.gene065805:intergenic | 40.0% |
| ! | TTTTCAGATTGACTGGGGAA+AGG | - | 21603:6014-6033 | MS.gene065805:intron | 40.0% |
| ! | TTTTTATTCCTGTGGTCGAC+TGG | - | 21603:7033-7052 | MS.gene065805:intron | 40.0% |
| !! | ATTCCACAACTTTGAAGCAG+AGG | + | 21603:6951-6970 | MS.gene065805:intergenic | 40.0% |
| !! | GAAGATAGAAAAATGGGCTG+TGG | - | 21603:7819-7838 | MS.gene065805:intron | 40.0% |
| !! | GTAGGTGCTTTGGAAACAAT+AGG | + | 21603:8670-8689 | MS.gene065805:intergenic | 40.0% |
| !! | GTGTAGCTCTAAAACTTGAG+TGG | + | 21603:5815-5834 | MS.gene065805:intergenic | 40.0% |
| !!! | AGTTTTAGAGCTACACAGAG+CGG | - | 21603:5819-5838 | MS.gene065805:intron | 40.0% |
| !!! | CAGATTTTTTAGGGTCCTCT+TGG | + | 21603:6115-6134 | MS.gene065805:intergenic | 40.0% |
| AAGACTGAACTTCACCTCCA+TGG | + | 21603:6503-6522 | MS.gene065805:intergenic | 45.0% | |
| AAGCTCCTGAAGTTCATCAG+TGG | + | 21603:10360-10379 | MS.gene065805:intergenic | 45.0% | |
| ACAGCGTGTTCAGAGTAACA+AGG | + | 21603:7369-7388 | MS.gene065805:intergenic | 45.0% | |
| ACCTCCATGGGGAAATATGT+TGG | + | 21603:6490-6509 | MS.gene065805:intergenic | 45.0% | |
| AGACTGAACTTCACCTCCAT+GGG | + | 21603:6502-6521 | MS.gene065805:intergenic | 45.0% | |
| ATCAAGCAGCACATGGTAGT+GGG | + | 21603:10324-10343 | MS.gene065805:intergenic | 45.0% | |
| ATCAAGTGAGGTCAGCTACA+TGG | + | 21603:6554-6573 | MS.gene065805:intergenic | 45.0% | |
| ATGTAGCTGACCTCACTTGA+TGG | - | 21603:6553-6572 | MS.gene065805:intron | 45.0% | |
| CAATCTCATCAAGCAGCACA+TGG | + | 21603:10331-10350 | MS.gene065805:intergenic | 45.0% | |
| CATTCAGTCCAAACTTCCAG+GGG | - | 21603:8089-8108 | MS.gene065805:intron | 45.0% | |
| CGATCAGGAAGCAACAAAGA+AGG | + | 21603:8125-8144 | MS.gene065805:intergenic | 45.0% | |
| CGATTGCAAATGCATTACGC+GGG | - | 21603:5525-5544 | MS.gene065805:intron | 45.0% | |
| CTCATCCATCCAATCAAGAG+TGG | - | 21603:6145-6164 | MS.gene065805:CDS | 45.0% | |
| CTGATGATTTCACCAACTGC+AGG | - | 21603:9097-9116 | MS.gene065805:CDS | 45.0% | |
| CTTCTCCACTGATGAACTTC+AGG | - | 21603:10352-10371 | MS.gene065805:CDS | 45.0% | |
| GAACCTCTGCTTCAAAGTTG+TGG | - | 21603:6945-6964 | MS.gene065805:intron | 45.0% | |
| GACATTCAGTCCAAACTTCC+AGG | - | 21603:8087-8106 | MS.gene065805:intron | 45.0% | |
| GCCAAGTGTGCATAGCATAT+AGG | + | 21603:10642-10661 | MS.gene065805:intergenic | 45.0% | |
| GCGATTGCAAATGCATTACG+CGG | - | 21603:5524-5543 | MS.gene065805:intron | 45.0% | |
| GCTCATGAACCTCAATGATC+TGG | + | 21603:9558-9577 | MS.gene065805:intergenic | 45.0% | |
| GGAACGTTGTCAGGAGAATT+GGG | + | 21603:9736-9755 | MS.gene065805:intergenic | 45.0% | |
| GGCCTGCCAACATTAATACA+TGG | + | 21603:6460-6479 | MS.gene065805:intergenic | 45.0% | |
| GGGAAATATGTTGGCCGTTT+AGG | + | 21603:6481-6500 | MS.gene065805:intergenic | 45.0% | |
| TAGAATGAGGGTAGGTGCTT+TGG | + | 21603:8680-8699 | MS.gene065805:intergenic | 45.0% | |
| TCCATTCCTAGAATGAGGGT+AGG | + | 21603:8688-8707 | MS.gene065805:intergenic | 45.0% | |
| TCTACAGTAAAGAGAGCAGG+AGG | + | 21603:7329-7348 | MS.gene065805:intergenic | 45.0% | |
| TGAACTCGACCAGATCATTG+AGG | - | 21603:9546-9565 | MS.gene065805:intron | 45.0% | |
| TGACCTCACTTGATGGGATA+AGG | - | 21603:6560-6579 | MS.gene065805:intron | 45.0% | |
| TGATGTACGAGGACTTGTGA+GGG | - | 21603:7861-7880 | MS.gene065805:intron | 45.0% | |
| TGGAACGTTGTCAGGAGAAT+TGG | + | 21603:9737-9756 | MS.gene065805:intergenic | 45.0% | |
| TGTAGCTGACCTCACTTGAT+GGG | - | 21603:6554-6573 | MS.gene065805:intron | 45.0% | |
| TTCTCAACTCTCACCATTGG+TGG | + | 21603:8057-8076 | MS.gene065805:intergenic | 45.0% | |
| ! | AAAGCACCTACCCTCATTCT+AGG | - | 21603:8679-8698 | MS.gene065805:intron | 45.0% |
| ! | AATTTTGCTGATGTTGGGGG+TGG | - | 21603:5768-5787 | MS.gene065805:intron | 45.0% |
| ! | ACCTACCCTCATTCTAGGAA+TGG | - | 21603:8684-8703 | MS.gene065805:intron | 45.0% |
| ! | AGGCCCAGGTTGAATTATCA+TGG | + | 21603:5953-5972 | MS.gene065805:intergenic | 45.0% |
| ! | ATTGCTTGTTGCGCTCATAG+GGG | - | 21603:7553-7572 | MS.gene065805:intron | 45.0% |
| ! | CTCAATGGTGTTAGGTCTTC+TGG | - | 21603:8784-8803 | MS.gene065805:intron | 45.0% |
| ! | GGTTGGTCAATCATCTGCAA+AGG | + | 21603:7994-8013 | MS.gene065805:intergenic | 45.0% |
| ! | GTTTTCTTTGAGCCCACTTC+TGG | - | 21603:9189-9208 | MS.gene065805:intron | 45.0% |
| ! | TAGTTACGGTTCGGCGTTAA+TGG | - | 21603:8372-8391 | MS.gene065805:intron | 45.0% |
| ! | TGCTTCTGACTTGAATGGCA+AGG | - | 21603:5166-5185 | MS.gene065805:CDS | 45.0% |
| ! | TTCTGAAAACACTTGCCAGG+TGG | + | 21603:9757-9776 | MS.gene065805:intergenic | 45.0% |
| !! | AGCACGACTGCTATTTCAGT+TGG | - | 21603:10513-10532 | MS.gene065805:intron | 45.0% |
| !! | CATGTGCTGCTTGATGAGAT+TGG | - | 21603:10329-10348 | MS.gene065805:CDS | 45.0% |
| !! | CTGCAGTTGGTGAAATCATC+AGG | + | 21603:9099-9118 | MS.gene065805:intergenic | 45.0% |
| !! | GGTGGGTTGAACTCTTTGTT+GGG | - | 21603:8622-8641 | MS.gene065805:intron | 45.0% |
| !! | TAGAGGATGTTGTTTCCAGC+AGG | - | 21603:5267-5286 | MS.gene065805:intron | 45.0% |
| !! | TGGTGGGTTGAACTCTTTGT+TGG | - | 21603:8621-8640 | MS.gene065805:intron | 45.0% |
| !!! | GTTTTAGAGCTACACAGAGC+GGG | - | 21603:5820-5839 | MS.gene065805:intron | 45.0% |
| !!! | TTATAGTTTTATTTTAAATA+TGG | - | 21603:8515-8534 | MS.gene065805:intron | 5.0% |
| AAATAGCAGTCGTGCTCCTC+TGG | + | 21603:10509-10528 | None:intergenic | 50.0% | |
| AAGCACAGGCTTCACTCAAG+TGG | - | 21603:6977-6996 | MS.gene065805:intron | 50.0% | |
| ACAGGCTTCACTCAAGTGGA+GGG | - | 21603:6981-7000 | MS.gene065805:intron | 50.0% | |
| ACGGCCAACATATTTCCCCA+TGG | - | 21603:6483-6502 | MS.gene065805:intron | 50.0% | |
| ACTTCAAAGGGCTTCACTGG+TGG | - | 21603:6734-6753 | MS.gene065805:intron | 50.0% | |
| CACACTTCAAAGGGCTTCAC+TGG | - | 21603:6731-6750 | MS.gene065805:intron | 50.0% | |
| CATCAAGCAGCACATGGTAG+TGG | + | 21603:10325-10344 | MS.gene065805:intergenic | 50.0% | |
| CTAGGAATGGATGTGTCCCA+TGG | - | 21603:8697-8716 | MS.gene065805:intron | 50.0% | |
| CTATTGTCCTGCAGCTTGGT+GGG | - | 21603:8605-8624 | MS.gene065805:intron | 50.0% | |
| CTCTCTATTGTCCTGCAGCT+TGG | - | 21603:8601-8620 | MS.gene065805:intron | 50.0% | |
| GAAGGAATATCAGTCTGCCC+TGG | + | 21603:8727-8746 | MS.gene065805:intergenic | 50.0% | |
| GACTGAACTTCACCTCCATG+GGG | + | 21603:6501-6520 | MS.gene065805:intergenic | 50.0% | |
| GATAATTCAACCTGGGCCTG+TGG | - | 21603:5954-5973 | MS.gene065805:CDS | 50.0% | |
| GCCAACATATTTCCCCATGG+AGG | - | 21603:6486-6505 | MS.gene065805:intron | 50.0% | |
| GCTGGAAGAATCTTGTGTGG+TGG | + | 21603:9714-9733 | MS.gene065805:intergenic | 50.0% | |
| GTGATGTACGAGGACTTGTG+AGG | - | 21603:7860-7879 | MS.gene065805:intron | 50.0% | |
| GTTTAGACGAGCTCCACCAA+TGG | - | 21603:8041-8060 | MS.gene065805:intron | 50.0% | |
| TCACTCCGAGAAATGGACGA+TGG | - | 21603:7656-7675 | MS.gene065805:intron | 50.0% | |
| TCGCTTACAGCGGCAATTGA+AGG | + | 21603:8745-8764 | MS.gene065805:intergenic | 50.0% | |
| TCTACCTCTGTGCTCATGCT+GGG | - | 21603:9891-9910 | MS.gene065805:intron | 50.0% | |
| TCTATTGTCCTGCAGCTTGG+TGG | - | 21603:8604-8623 | MS.gene065805:intron | 50.0% | |
| TCTCTCTTGTGGCTTCTGTC+TGG | + | 21603:6766-6785 | MS.gene065805:intergenic | 50.0% | |
| TCTGCACGATGTGATGTACG+AGG | - | 21603:7850-7869 | MS.gene065805:intron | 50.0% | |
| TTCTACCTCTGTGCTCATGC+TGG | - | 21603:9890-9909 | MS.gene065805:intron | 50.0% | |
| ! | AGCGGGCTCTCTCTTAACAT+AGG | - | 21603:5837-5856 | MS.gene065805:intron | 50.0% |
| ! | TCTTCTTTTTCCAGGGCCCT+TGG | + | 21603:8252-8271 | MS.gene065805:intergenic | 50.0% |
| ! | TGGGCTGGAAGAATCTTGTG+TGG | + | 21603:9717-9736 | MS.gene065805:intergenic | 50.0% |
| !! | AGGTTGTCAGCTCTAGACAG+TGG | - | 21603:8850-8869 | MS.gene065805:CDS | 50.0% |
| !! | CAGTGAAGCCCTTTGAAGTG+TGG | + | 21603:6733-6752 | MS.gene065805:intergenic | 50.0% |
| !! | CTGAGGATGAAGGCATCATG+AGG | - | 21603:8962-8981 | MS.gene065805:intron | 50.0% |
| AAGAAATCCACCACAGGCCC+AGG | + | 21603:5967-5986 | MS.gene065805:intergenic | 55.0% | |
| AATTCAACCTGGGCCTGTGG+TGG | - | 21603:5957-5976 | MS.gene065805:CDS | 55.0% | |
| ACACTTGGCCGCTACTCAGT+TGG | - | 21603:10653-10672 | MS.gene065805:CDS | 55.0% | |
| ACTTGGCCGCTACTCAGTTG+GGG | - | 21603:10655-10674 | MS.gene065805:CDS | 55.0% | |
| AGAAGGAATTGAGGAGCCCC+TGG | + | 21603:8108-8127 | MS.gene065805:intergenic | 55.0% | |
| AGTTCAACCCACCAAGCTGC+AGG | + | 21603:8615-8634 | MS.gene065805:intergenic | 55.0% | |
| ATGTGTCCCATGGCTCACCA+GGG | - | 21603:8707-8726 | MS.gene065805:intron | 55.0% | |
| CACAGGCTTCACTCAAGTGG+AGG | - | 21603:6980-6999 | MS.gene065805:intron | 55.0% | |
| CACTTGGCCGCTACTCAGTT+GGG | - | 21603:10654-10673 | MS.gene065805:CDS | 55.0% | |
| CGTTGTCAGGAGAATTGGGC+TGG | + | 21603:9732-9751 | MS.gene065805:intergenic | 55.0% | |
| GAGCAAGAGTTCCCTGCAGT+TGG | + | 21603:9112-9131 | MS.gene065805:intergenic | 55.0% | |
| GATGTTGGGGGTGGTGTTCT+TGG | - | 21603:5777-5796 | MS.gene065805:intron | 55.0% | |
| GCTTCCTCAAACAGGCCAAG+AGG | - | 21603:6097-6116 | MS.gene065805:CDS | 55.0% | |
| GGTGGAGCTCGTCTAAACTG+AGG | + | 21603:8039-8058 | MS.gene065805:intergenic | 55.0% | |
| GGTGGTGTTCTTGGCTGTAG+AGG | - | 21603:5786-5805 | MS.gene065805:intron | 55.0% | |
| TCATCCCAGCATGAGCACAG+AGG | + | 21603:9898-9917 | MS.gene065805:intergenic | 55.0% | |
| TCTCCTGACAACGTTCCACC+TGG | - | 21603:9739-9758 | MS.gene065805:intron | 55.0% | |
| TCTTTGACATCCAAGGGCCC+TGG | - | 21603:8239-8258 | MS.gene065805:intron | 55.0% | |
| TGCAAATGCATTACGCGGGC+AGG | - | 21603:5529-5548 | MS.gene065805:intron | 55.0% | |
| TTGAGGAGCCCCTGGAAGTT+TGG | + | 21603:8100-8119 | MS.gene065805:intergenic | 55.0% | |
| TTGCCAGGTGGAACGTTGTC+AGG | + | 21603:9745-9764 | MS.gene065805:intergenic | 55.0% | |
| ! | ACGCGTTTTGCCTGCTCCAA+AGG | - | 21603:7004-7023 | MS.gene065805:intron | 55.0% |
| ! | TTTGTGCTCAGGGCACCAGT+AGG | - | 21603:10294-10313 | MS.gene065805:CDS | 55.0% |
| !! | AGCAGCACATGGTAGTGGGT+AGG | + | 21603:10320-10339 | MS.gene065805:intergenic | 55.0% |
| !! | ATGGTAGTGGGTAGGCCTAC+TGG | + | 21603:10312-10331 | MS.gene065805:intergenic | 55.0% |
| AGTCAGGACCAGTCGACCAC+AGG | + | 21603:7044-7063 | MS.gene065805:intergenic | 60.0% | |
| AGTCTGCCCTGGTGAGCCAT+GGG | + | 21603:8716-8735 | MS.gene065805:intergenic | 60.0% | |
| GATGTGTCCCATGGCTCACC+AGG | - | 21603:8706-8725 | MS.gene065805:intron | 60.0% | |
| GGGTCCTCTTGGCCTGTTTG+AGG | + | 21603:6104-6123 | MS.gene065805:intergenic | 60.0% | |
| CAGTCTGCCCTGGTGAGCCA+TGG | + | 21603:8717-8736 | MS.gene065805:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21603 | gene | 5143 | 10679 | 5143 | ID=MS.gene065805 |
| 21603 | mRNA | 5143 | 10679 | 5143 | ID=MS.gene065805.t1;Parent=MS.gene065805 |
| 21603 | exon | 10534 | 10679 | 10534 | ID=MS.gene065805.t1.exon1;Parent=MS.gene065805.t1 |
| 21603 | CDS | 10534 | 10679 | 10534 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 10204 | 10425 | 10204 | ID=MS.gene065805.t1.exon2;Parent=MS.gene065805.t1 |
| 21603 | CDS | 10204 | 10425 | 10204 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 9981 | 10099 | 9981 | ID=MS.gene065805.t1.exon3;Parent=MS.gene065805.t1 |
| 21603 | CDS | 9981 | 10099 | 9981 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 9787 | 9884 | 9787 | ID=MS.gene065805.t1.exon4;Parent=MS.gene065805.t1 |
| 21603 | CDS | 9787 | 9884 | 9787 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 9614 | 9711 | 9614 | ID=MS.gene065805.t1.exon5;Parent=MS.gene065805.t1 |
| 21603 | CDS | 9614 | 9711 | 9614 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 9315 | 9468 | 9315 | ID=MS.gene065805.t1.exon6;Parent=MS.gene065805.t1 |
| 21603 | CDS | 9315 | 9468 | 9315 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 9019 | 9135 | 9019 | ID=MS.gene065805.t1.exon7;Parent=MS.gene065805.t1 |
| 21603 | CDS | 9019 | 9135 | 9019 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 8797 | 8904 | 8797 | ID=MS.gene065805.t1.exon8;Parent=MS.gene065805.t1 |
| 21603 | CDS | 8797 | 8904 | 8797 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 8120 | 8191 | 8120 | ID=MS.gene065805.t1.exon9;Parent=MS.gene065805.t1 |
| 21603 | CDS | 8120 | 8191 | 8120 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 7907 | 8023 | 7907 | ID=MS.gene065805.t1.exon10;Parent=MS.gene065805.t1 |
| 21603 | CDS | 7907 | 8023 | 7907 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 7657 | 7822 | 7657 | ID=MS.gene065805.t1.exon11;Parent=MS.gene065805.t1 |
| 21603 | CDS | 7657 | 7822 | 7657 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 7456 | 7568 | 7456 | ID=MS.gene065805.t1.exon12;Parent=MS.gene065805.t1 |
| 21603 | CDS | 7456 | 7568 | 7456 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 7066 | 7203 | 7066 | ID=MS.gene065805.t1.exon13;Parent=MS.gene065805.t1 |
| 21603 | CDS | 7066 | 7203 | 7066 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 6839 | 6900 | 6839 | ID=MS.gene065805.t1.exon14;Parent=MS.gene065805.t1 |
| 21603 | CDS | 6839 | 6900 | 6839 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 6638 | 6703 | 6638 | ID=MS.gene065805.t1.exon15;Parent=MS.gene065805.t1 |
| 21603 | CDS | 6638 | 6703 | 6638 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 6247 | 6318 | 6247 | ID=MS.gene065805.t1.exon16;Parent=MS.gene065805.t1 |
| 21603 | CDS | 6247 | 6318 | 6247 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 6062 | 6174 | 6062 | ID=MS.gene065805.t1.exon17;Parent=MS.gene065805.t1 |
| 21603 | CDS | 6062 | 6174 | 6062 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 5903 | 5976 | 5903 | ID=MS.gene065805.t1.exon18;Parent=MS.gene065805.t1 |
| 21603 | CDS | 5903 | 5976 | 5903 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 5423 | 5517 | 5423 | ID=MS.gene065805.t1.exon19;Parent=MS.gene065805.t1 |
| 21603 | CDS | 5423 | 5517 | 5423 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 5288 | 5319 | 5288 | ID=MS.gene065805.t1.exon20;Parent=MS.gene065805.t1 |
| 21603 | CDS | 5288 | 5319 | 5288 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| 21603 | exon | 5143 | 5188 | 5143 | ID=MS.gene065805.t1.exon21;Parent=MS.gene065805.t1 |
| 21603 | CDS | 5143 | 5188 | 5143 | ID=cds.MS.gene065805.t1;Parent=MS.gene065805.t1 |
| Gene Sequence |
| Protein sequence |
